Cla97C01G005720 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G005720
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Chromosome transmission fidelity protein 8
Location	Cla97Chr01 : 5502298 .. 5504145 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATCAAGTTGAAATGTAACTGTGGCGAAGCCAAATGCTTGGAATGGGCTGTCGTTGAGTTGCAGGGCGTAGTTGAACCTCAATCCACCTTTCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGGCCCTCCGCTCAGGTACTTTCTTTTAACTTTCTCATTTATCCATCATTTAACAGTTCCATCAATTTCTTCTTGCCTTCTATCTAATTCTCAATCCCTGTCGTAACCCTAGAATTGAATTCCCTGACAATACGACGAAATTGTTTACACTAGTTAGTTGAATTCCCCTGCTGTAACCTAATTGATGAGGAATTTGCAAAATTGGTCTCCAAGAGTGATTTCTGTTCCGTGAACTCTTTGTCTTTTGTTTCTGGGGTGATTTGTAGCATTAAACTAGTTGCCTCTAATTCTTTCAATTGATCGAGGGGTTATTTTTGGGTTTGTAGGAAGTGTATACTTTTACAGTGGGGTACCACGAGCTGACAGGAAGCAAAGTGCCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCCGTGGATGAGGATCAGAGTACTAACACCAAATCGGTTAATGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGGCCAAAGGCCCTCATATCCAGTAAGTTCCTAAAATTTTGCTAGATTTTTGAAAATTTTACTTTGAAAGTAAGCTTATACAATAACGAATTTATTGGTAAAGAAAAATTCAGTTTCAGAGAATAGATAATATAAAACCAGATGTAAACAAATCTATTCCGAACAATGTAAATCTTGCAAAGTCAATGGAAGTTTCATTGTGTTTTCAAGATGAGAACATAAATAATCGGGAACAATCTAAAAGTCAATAGATTTAGATTTAGACCTGTGTTTTGGACCCTAAAACGTAGATAAAGTCACTGCCAAAGGTTATCTGGCTAATTTTTCTGGACGTACAAATAGTAAGATATGGAGGATTTTTAGGCACTACAGCTGTAGGGTTTTGACAAAATATTACAAGAGTAGAAAGTTCCTCGAAAAAGTTCGAGTGATGAGTTTCAAATACTATAGAATGAGTTTATACTTTTGATTTCGAATCCATTATAGTTTGAACCATTTAAGTTTGATATACTAACTCTAATTAATTTTTTTTTAATTTGTTTTTTATATTCTTTGGTCTGAGAGTAGGGCAAATGATGTGAATGGTACAAAACTTTGGAAGTCTTTTAGTAATTGAGAATCGAGATGGAGGAGAGAATTTTGTGCGACTCTGAATAATTTTTCATATAGTGGGTTTCTTTTTGGGGGTTGAGGGTTTTCTCTGGTTTTTTAGTTTAGGTGGGACAAAACATTGAGAGATCAGTCCTTGTTTTCTATTTTTGTTAATTTGTCAATTATTTTATGCTTATTCCTGGAATATAAGTGATAGTTTTTTTTCCCCCCAACAAAAACCTTGATTGTTAAGCGTGGATTTACAAATGTTCTTGTTTCACTTTCTAATCTGGTTGATTTTCTTAATGAATTGAATATATTTTGTTAAAGTAGCATGGCCAACGTCTCTGATCTGGCTTTGAGTGTATAAAGTTTTGTAAATTAACAGAATTTGTTCGAAAGGTAGTACAACTGTTTTGAATTTTAAGAATAACGTTAAACTTAATATCCCAAGCATGCTTTAATTTCTGTAAAGAGATGTTTTCTTTCACTTCTTTTCTTCTTTGGTGCAATGTGTAATCCCTATGATGGTTTTTCCCCTTCAGAACCACAGCCATTAGTAAAGGAAAGATCCCGAGCTTCAGGATTTGCAATGACAGGCCAAACAACATGA

mRNA sequence

ATGCAGATCAAGTTGAAATGTAACTGTGGCGAAGCCAAATGCTTGGAATGGGCTGTCGTTGAGTTGCAGGGCGTAGTTGAACCTCAATCCACCTTTCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGGCCCTCCGCTCAGGAAGTGTATACTTTTACAGTGGGGTACCACGAGCTGACAGGAAGCAAAGTGCCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCCGTGGATGAGGATCAGAGTACTAACACCAAATCGGTTAATGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGGCCAAAGGCCCTCATATCCAAACCACAGCCATTAGTAAAGGAAAGATCCCGAGCTTCAGGATTTGCAATGACAGGCCAAACAACATGA

Coding sequence (CDS)

ATGCAGATCAAGTTGAAATGTAACTGTGGCGAAGCCAAATGCTTGGAATGGGCTGTCGTTGAGTTGCAGGGCGTAGTTGAACCTCAATCCACCTTTCAAGATCGCCTTCAAAACCTCGAAATCGGCATTCTATGTCGGCCCTCCGCTCAGGAAGTGTATACTTTTACAGTGGGGTACCACGAGCTGACAGGAAGCAAAGTGCCTTTGAAGAAGCCATTGTTGGTGTTGAAGAAAACGAGGTCCGTGGATGAGGATCAGAGTACTAACACCAAATCGGTTAATGCAGAGTTGGAAGTCATTGGGATAATCAGGCAGCGGATTCTGTTTAAGACCAGGCCAAAGGCCCTCATATCCAAACCACAGCCATTAGTAAAGGAAAGATCCCGAGCTTCAGGATTTGCAATGACAGGCCAAACAACATGA

Protein sequence

MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKPQPLVKERSRASGFAMTGQTT

Homology

[Close]

BLAST of Cla97C01G005720 vs. NCBI nr
Match: XP_004143632.1 (PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis sativus] >KGN50412.1 hypothetical protein Csa_5G172910 [Cucumis sativus])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGE KCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+ LKKPLLVLKKTRSVDEDQS++TKS NAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQTT 141
           QPLVKERSRASG A+TGQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]

BLAST of Cla97C01G005720 vs. NCBI nr
Match: XP_008467231.1 (PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 9.7e-64
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQIKLKCNCGE KCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKV LKKPLLVLKKTRSVDEDQS++ KS NAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQTT 141
           +PLVKERSRASG A+ GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]

BLAST of Cla97C01G005720 vs. NCBI nr
Match: XP_023551664.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 242.7 bits (618), Expect = 7.7e-61
Identity = 120/140 (85.71%), Postives = 128/140 (91.43%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQIK+KCNCGE KCLEWAVVELQG+VE Q +F+DRLQ LEIG+LCRPSAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRLQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVPLKKPLLVLKK + VDEDQS +TKS  AELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQTT 141
           QP VKERSRASG A+TGQ T
Sbjct: 121 QPSVKERSRASGSAVTGQAT 140

[Close]

BLAST of Cla97C01G005720 vs. NCBI nr
Match: XP_022970179.1 (putative uncharacterized protein DDB_G0287975 [Cucurbita maxima])

HSP 1 Score: 241.5 bits (615), Expect = 1.7e-60
Identity = 119/140 (85.00%), Postives = 127/140 (90.71%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQIK+KCNCGE KCLEWAVVELQG+VE Q +F+DR Q LEIG+LCRPSAQEVYTFTVGYH
Sbjct: 1   MQIKVKCNCGETKCLEWAVVELQGIVEAQPSFEDRFQTLEIGVLCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVPLKKPLLVLKK + VDEDQS +TKS  AELEVIGIIRQR LFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKKCVDEDQSGDTKSATAELEVIGIIRQRFLFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQTT 141
           QP VKERSRASG A+TGQTT
Sbjct: 121 QPSVKERSRASGSAVTGQTT 140

[Close]

BLAST of Cla97C01G005720 vs. NCBI nr
Match: XP_022159534.1 (putative uncharacterized protein DDB_G0287975 [Momordica charantia])

HSP 1 Score: 236.9 bits (603), Expect = 4.2e-59
Identity = 119/139 (85.61%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQIK+KCNCGE  CLEWAVVELQGVVEPQS+FQDRLQNLEIG+LCRPSAQEV+TFTVGYH
Sbjct: 1   MQIKVKCNCGETNCLEWAVVELQGVVEPQSSFQDRLQNLEIGVLCRPSAQEVFTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKVPLKKPLLVLKK  SV+EDQS+++ S +AELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVPLKKPLLVLKKKTSVNEDQSSDSNSTSAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQT 140
           QPLVKERSR S  A+T QT
Sbjct: 121 QPLVKERSRCSS-AVTDQT 138

[Close]

BLAST of Cla97C01G005720 vs. TrEMBL
Match: tr|A0A0A0KPT4|A0A0A0KPT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.1e-67
Identity = 131/140 (93.57%), Postives = 136/140 (97.14%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           M+IKLKCNCGE KCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH
Sbjct: 1   MEIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSK+ LKKPLLVLKKTRSVDEDQS++TKS NAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKISLKKPLLVLKKTRSVDEDQSSDTKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQTT 141
           QPLVKERSRASG A+TGQTT
Sbjct: 121 QPLVKERSRASGSAVTGQTT 140

[Close]

BLAST of Cla97C01G005720 vs. TrEMBL
Match: tr|A0A1S3CT18|A0A1S3CT18_CUCME (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 6.4e-64
Identity = 127/140 (90.71%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQIKLKCNCGE KCLEWAVVELQGVVE QSTFQDR+QNLEIGILCRPSAQE+YTFTVGYH
Sbjct: 1   MQIKLKCNCGETKCLEWAVVELQGVVEHQSTFQDRIQNLEIGILCRPSAQEMYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           ELTGSKV LKKPLLVLKKTRSVDEDQS++ KS NAELEVIGIIRQRILFKTRPKALISKP
Sbjct: 61  ELTGSKVSLKKPLLVLKKTRSVDEDQSSDIKSGNAELEVIGIIRQRILFKTRPKALISKP 120

Query: 121 QPLVKERSRASGFAMTGQTT 141
           +PLVKERSRASG A+ GQTT
Sbjct: 121 EPLVKERSRASGSAVKGQTT 140

[Close]

BLAST of Cla97C01G005720 vs. TrEMBL
Match: tr|A0A2P4HXA0|A0A2P4HXA0_QUESU (Methyl-cpg-binding domain-containing protein 13 OS=Quercus suber OX=58331 GN=CFP56_31311 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.9e-47
Identity = 98/140 (70.00%), Postives = 113/140 (80.71%), Query Frame = 0


Query: 3   IKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHEL 62
           I++KC CGEAKC EWAVVELQGVVE Q  FQDRLQNLEIG+LCRPS+Q+VYT  VGYHEL
Sbjct: 673 IRVKCKCGEAKCPEWAVVELQGVVEAQPAFQDRLQNLEIGVLCRPSSQQVYTLKVGYHEL 732

Query: 63  TGSKVPLKKPLLVLKKTRSVD--EDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 122
           TGSKV LKKP+LVL+KT+  D  +D  T+T S N EL+V+GIIR RILFKTRPK LISKP
Sbjct: 733 TGSKVALKKPMLVLQKTKRTDTGDDVGTDTNSSNVELQVVGIIRHRILFKTRPKPLISKP 792

Query: 123 QPLVKERSRASGFAMTGQTT 141
           Q  VKE++ A+G     QTT
Sbjct: 793 QATVKEKASATGAVALNQTT 812

[Close]

BLAST of Cla97C01G005720 vs. TrEMBL
Match: tr|D7TMR3|D7TMR3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_16s0100g01250 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 2.4e-47
Identity = 95/132 (71.97%), Postives = 114/132 (86.36%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQI++KC+CGE KC EWA+VELQGVVE Q +FQ  +QNLEIG LCRPS+QE YTFTVGYH
Sbjct: 1   MQIQVKCSCGEEKCPEWAIVELQGVVEVQPSFQGTVQNLEIGQLCRPSSQENYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALISKP 120
           EL+GSKVPLKKP +VLKKTR +D +Q+ ++KS + +LEV+GIIR RILFK+RPKALISKP
Sbjct: 61  ELSGSKVPLKKPFVVLKKTRHLDANQNGDSKSSSVDLEVVGIIRHRILFKSRPKALISKP 120

Query: 121 QPLVKERSRASG 133
           QPLVKE+  A G
Sbjct: 121 QPLVKEKVSAGG 132

[Close]

BLAST of Cla97C01G005720 vs. TrEMBL
Match: tr|A0A058ZZB2|A0A058ZZB2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00242 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.4e-47
Identity = 97/135 (71.85%), Postives = 114/135 (84.44%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYH 60
           MQI+LKC+CG+  C EWA+VELQGVVE Q +FQ +LQNLEIG LCRPS+QEVYTFTVGYH
Sbjct: 1   MQIQLKCSCGDGSCPEWAIVELQGVVEVQPSFQGQLQNLEIGKLCRPSSQEVYTFTVGYH 60

Query: 61  ELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNA---ELEVIGIIRQRILFKTRPKALI 120
           ELTGSKV LKKP LVLKK + +D +QS+NT S N+   ELEV+GIIR RILFKTRPKALI
Sbjct: 61  ELTGSKVLLKKPFLVLKKVKLMDAEQSSNTDSANSPKVELEVVGIIRHRILFKTRPKALI 120

Query: 121 SKPQPLVKERSRASG 133
           S+P+P+VK  + ASG
Sbjct: 121 SRPEPVVKATAHASG 135

[Close]

BLAST of Cla97C01G005720 vs. Swiss-Prot
Match: sp|P0CG13|CTF8_HUMAN (Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CHTF8 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 9.7e-07
Identity = 34/103 (33.01%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLV 75
           EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALIS 119
           L K    D+D     +       V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGDQDCDELGRETGTRYLVTALIKDKILFKTRPKPIIT 115

[Close]

BLAST of Cla97C01G005720 vs. Swiss-Prot
Match: sp|P0CG15|CTF8_MOUSE (Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=Chtf8 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.7e-06
Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLV 75
           EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKTIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALIS 119
           L K     +D     +    +  V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGKQDCDEPGRGTGTQYLVTALIKNKILFKTRPKPIIT 115

[Close]

BLAST of Cla97C01G005720 vs. Swiss-Prot
Match: sp|P0C6T1|CTF8_RAT (Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116 GN=Chtf8 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-06
Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 0


Query: 16  EWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLV 75
           EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  V
Sbjct: 16  EWVLMELQGEIE--ARYSTGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKIIHLEKPFAV 75

Query: 76  LKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALIS 119
           L K     +D     +    +  V  +I+ +ILFKTRPK +I+
Sbjct: 76  LVKHTPGKQDCDELGRETGTQYLVTALIKNKILFKTRPKPIIT 115

[Close]

BLAST of Cla97C01G005720 vs. Swiss-Prot
Match: sp|P0CG11|CTF8_BOVIN (Chromosome transmission fidelity protein 8 homolog OS=Bos taurus OX=9913 GN=CHTF8 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-05
Identity = 34/111 (30.63%), Postives = 54/111 (48.65%), Query Frame = 0


Query: 8   NCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCRPSAQEVYTFTVGYHELTGSKV 67
           + G     EW ++ELQG +E + +    L    +G L   + + +    VG+H L G  +
Sbjct: 8   SAGAGGLAEWVLMELQGEIEARHS--TGLAGNLLGDL-HYTTEGIPVLIVGHHILYGKII 67

Query: 68  PLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALIS 119
            L+KP  VL K    ++D             V  +I+ +ILFKTRPK +I+
Sbjct: 68  HLEKPFAVLVKHTPGEQDCDELGCESGTRYLVTALIKNKILFKTRPKPIIT 115

[Close]

BLAST of Cla97C01G005720 vs. Swiss-Prot
Match: sp|Q65ZA6|CTF8_SCHPO (Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ctf8 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.9e-05
Identity = 35/93 (37.63%), Postives = 50/93 (53.76%), Query Frame = 0


Query: 25  VVEPQSTFQDRLQNLEIG----ILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKTR 84
           +VE Q+T + +  +L IG    I  + S ++  T TVG   + G    LKKPL VL+KT 
Sbjct: 16  LVEVQATLERKADSLHIGDLKIIKEKNSEKKKATLTVGNQYMEGVVESLKKPLAVLQKTN 75

Query: 85  SVDEDQSTNTKSVNAELEVIGIIRQRILFKTRP 114
           +   D      S + EL+   IIR+RI F +RP
Sbjct: 76  A---DPVDVYSSPSHELKCCSIIRERIRFSSRP 105

[Close]

BLAST of Cla97C01G005720 vs. TAIR10
Match: AT5G52220.1 (Chromosome transmission fidelity protein 8 (InterPro:IPR018607))

HSP 1 Score: 145.6 bits (366), Expect = 2.3e-35
Identity = 78/119 (65.55%), Postives = 90/119 (75.63%), Query Frame = 0


Query: 1   MQIKLKCNCGEAKCLEWAVVELQGVVEPQSTFQDRLQNLEIGILCR-PSAQEVYTFTVGY 60
           M+I++KC CGE +C EWA+VELQGVVE Q++FQ  +QNLEIG LC   S+Q  YTFTVGY
Sbjct: 1   MEIRVKCRCGEEECSEWAIVELQGVVETQASFQGSIQNLEIGRLCHSDSSQGTYTFTVGY 60

Query: 61  HELTGSKVPLKKPLLVLKKTRSVDEDQSTNTKSVNAELEVIGIIRQRILFKTRPKALIS 119
           HEL GSKV LKKPLLVLKK +  DE     T     ELEV+GIIR +ILFKTRPK LIS
Sbjct: 61  HELVGSKVTLKKPLLVLKKLQ-FDEVSGKAT-----ELEVVGIIRTKILFKTRPKPLIS 113

The following BLAST results are available for this feature:

BLAST of Cla97C01G005720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143632.1	1.2e-66	93.57	PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis sativus] >KGN5...	[more]
XP_008467231.1	9.7e-64	90.71	PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo]	[more]
XP_023551664.1	7.7e-61	85.71	putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo]	[more]
XP_022970179.1	1.7e-60	85.00	putative uncharacterized protein DDB_G0287975 [Cucurbita maxima]	[more]
XP_022159534.1	4.2e-59	85.61	putative uncharacterized protein DDB_G0287975 [Momordica charantia]	[more]

BLAST of Cla97C01G005720 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPT4\|A0A0A0KPT4_CUCSA	8.1e-67	93.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G172910 PE=4 SV=1	[more]
tr\|A0A1S3CT18\|A0A1S3CT18_CUCME	6.4e-64	90.71	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103504632 PE=4 SV=1	[more]
tr\|A0A2P4HXA0\|A0A2P4HXA0_QUESU	1.9e-47	70.00	Methyl-cpg-binding domain-containing protein 13 OS=Quercus suber OX=58331 GN=CFP...	[more]
tr\|D7TMR3\|D7TMR3_VITVI	2.4e-47	71.97	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_16s0100g01250 PE=4 SV=...	[more]
tr\|A0A058ZZB2\|A0A058ZZB2_EUCGR	5.4e-47	71.85	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00242 PE=4 SV...	[more]

BLAST of Cla97C01G005720 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P0CG13\|CTF8_HUMAN	9.7e-07	33.01	Chromosome transmission fidelity protein 8 homolog OS=Homo sapiens OX=9606 GN=CH...	[more]
sp\|P0CG15\|CTF8_MOUSE	1.7e-06	32.04	Chromosome transmission fidelity protein 8 homolog OS=Mus musculus OX=10090 GN=C...	[more]
sp\|P0C6T1\|CTF8_RAT	3.7e-06	32.04	Chromosome transmission fidelity protein 8 homolog OS=Rattus norvegicus OX=10116...	[more]
sp\|P0CG11\|CTF8_BOVIN	1.8e-05	30.63	Chromosome transmission fidelity protein 8 homolog OS=Bos taurus OX=9913 GN=CHTF...	[more]
sp\|Q65ZA6\|CTF8_SCHPO	6.9e-05	37.63	Chromosome transmission fidelity protein 8 OS=Schizosaccharomyces pombe (strain ...	[more]

BLAST of Cla97C01G005720 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52220.1	2.3e-35	65.55	Chromosome transmission fidelity protein 8 (InterPro:IPR018607)	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0007064	mitotic sister chromatid cohesion

Vocabulary: **Cellular Component**
Term	Definition
GO:0031390	Ctf18 RFC-like complex

Vocabulary: **INTERPRO**
Term	Definition
IPR018607	Ctf8

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007064	mitotic sister chromatid cohesion
biological_process	GO:0043666	regulation of phosphoprotein phosphatase activity
biological_process	GO:0009966	regulation of signal transduction
biological_process	GO:0043086	negative regulation of catalytic activity
cellular_component	GO:0031390	Ctf18 RFC-like complex
molecular_function	GO:0004864	protein phosphatase inhibitor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G005720.1	Cla97C01G005720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018607	Chromosome transmission fidelity protein 8	PFAM	PF09696	Ctf8	coord: 48..114 e-value: 8.5E-10 score: 39.0
None	No IPR available	PANTHER	PTHR28605	FAMILY NOT NAMED	coord: 1..121
None	No IPR available	PANTHER	PTHR28605:SF1	SI:CH211-218C6.5 PROTEIN	coord: 1..121

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G005720	Cla002343	Watermelon (97103) v1	wmwmbB238
Cla97C01G005720	Csa5G172910	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G005720	MELO3C005381	Melon (DHL92) v3.5.1	mewmbB009
Cla97C01G005720	ClCG01G005500	Watermelon (Charleston Gray)	wcgwmbB089
Cla97C01G005720	CSPI05G08330	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G005720	Cucsa.166500	Cucumber (Gy14) v1	cgywmbB288
Cla97C01G005720	CmaCh15G014040	Cucurbita maxima (Rimu)	cmawmbB285
Cla97C01G005720	CmoCh15G014750	Cucurbita moschata (Rifu)	cmowmbB267
Cla97C01G005720	Lsi09G005810	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G005720	CsGy5G005720	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G005720	MELO3C005381.2	Melon (DHL92) v3.6.1	medwmbB007
Cla97C01G005720	Carg20777	Silver-seed gourd	carwmbB0774
Cla97C01G005720	CsaV3_5G005720	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G005720	Bhi12G000494	Wax gourd	wgowmbB064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G005720	Silver-seed gourd	carwmbB0741
Cla97C01G005720	Cucurbita maxima (Rimu)	cmawmbB601
Cla97C01G005720	Cucurbita moschata (Rifu)	cmowmbB576