Cla97C01G003080 (gene) Watermelon (97103) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla97C01G003080
Type	gene
Organism	Citrullus lanatus (Watermelon (97103) v2)
Description	Osmotin
Location	Cla97Chr01 : 2876675 .. 2877153 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGCGAAGACCCTGGACGTGGCCATTGTGGAGGTCTCCTCGAATGTCAAGGTTATTAACTCACCACGTTTAAATTTTAAAAAGCTTAAGTTTATAGGTTAAACAGTATATAGTAAACGAATTTATTCATATTCTTAACAGGCCGTTACGCTGCTCCGCCTAACACCCTTGCGGAATATGCATTAAACCAATACAACAACTTGGACTTCTTGGATATCTCTCTTCCGGTGCAGTGCAGACATCAACGGACAATGCCCGAACCAGCTAAGGCCTCCGGGAGGCTGCAACAACCCGTACCGTGTTCAAAACCAACGAGTACTGCTGCAACTCCGGCAATTGTGGGCCGACTCCTTTTTCTAAGTTCTTCAAGGATCGGTGCCTTGATGCATACAGTTATCCCAAAGATGATGATCAAACTAGCACCTTCACTTGCCCTGGTGGAACCAACTATAGGGGTTGTCTTCTGCCCTTAG

mRNA sequence

ATGGAAATGGCGAAGACCCTGGACGTGGCCATTGTGGAGGTCTCCTCGAATGTCAAGGTTATTAACTCACCACGCCGTTACGCTGCTCCGCCTAACACCCTTGCGGAATATGCATTAAACCAATACAACAACTTGGACTTCTTGGATATCTCTCTTCCGGTGCAGTGCAGACATCAACGGACAATGCCCGAACCAGCTAAGGCCTCCGGGAGGCTGCAACAACCCGTACCGTGTTCAAAACCAACGAGTACTGCTGCAACTCCGGCAATTGTGGGCCGACTCCTTTTTCTAAGTTCTTCAAGGATCGGTGCCTTGATGCATACAGTTATCCCAAAGATGATGATCAAACTAGCACCTTCACTTGCCCTGGTGGAACCAACTATAGGGGTTGTCTTCTGCCCTTAG

Coding sequence (CDS)

ATGGAAATGGCGAAGACCCTGGACGTGGCCATTGTGGAGGTCTCCTCGAATGTCAAGGTTATTAACTCACCACGCCGTTACGCTGCTCCGCCTAACACCCTTGCGGAATATGCATTAAACCAATACAACAACTTGGACTTCTTGGATATCTCTCTTCCGGTGCAGTGCAGACATCAACGGACAATGCCCGAACCAGCTAAGGCCTCCGGGAGGCTGCAACAACCCGTACCGTGTTCAAAACCAACGAGTACTGCTGCAACTCCGGCAATTGTGGGCCGACTCCTTTTTCTAAGTTCTTCAAGGATCGGTGCCTTGATGCATACAGTTATCCCAAAGATGATGATCAAACTAGCACCTTCACTTGCCCTGGTGGAACCAACTATAGGGGTTGTCTTCTGCCCTTAG

Protein sequence

MEMAKTLDVAIVEVSSNVKVINSPRRYAAPPNTLAEYALNQYNNLDFLDISLPVQCRHQRTMPEPAKASGRLQQPVPCSKPTSTAATPAIVGRLLFLSSSRIGALMHTVIPKMMIKLAPSLALVEPTIGVVFCP

Homology

[Close]

BLAST of Cla97C01G003080 vs. NCBI nr
Match: PNS23055.1 (hypothetical protein POPTR_T094200v3 [Populus trichocarpa])

HSP 1 Score: 58.2 bits (139), Expect = 2.6e-05
Identity = 50/124 (40.32%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL-----------PV--QCRHQR-------TMPEPA 86
           +  PPNTLAEYALNQ+NNLDF DISL           PV   CR  R         P P 
Sbjct: 118 FGKPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDFSPVSGNCRGIRCAADINGQCPNPL 177

Query: 87  KASGRLQQPVPCSKPTSTAATPAIVGRLLFLSSSRIGALMHTVIPKMMIKLAPSLALVEP 131
           +ASG    P    K          V + + L  S  GAL   VI K M K APS   VE 
Sbjct: 178 RASGGCNNPCTVFKTDQYCCNSGTVAQQITLGFSSRGALTLIVILK-MTKQAPSPVPVEL 237

[Close]

BLAST of Cla97C01G003080 vs. NCBI nr
Match: XP_012836299.1 (PREDICTED: thaumatin-like protein [Erythranthe guttata] >EYU38379.1 hypothetical protein MIMGU_mgv1a013131mg [Erythranthe guttata])

HSP 1 Score: 54.7 bits (130), Expect = 2.8e-04
Identity = 34/75 (45.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL------PVQ-------CRHQR-TMPEPAKASGRL 86
           Y  PPNTLAEYALNQ+NNLDFLDISL      P++       CR  R T P   +    L
Sbjct: 102 YGQPPNTLAEYALNQFNNLDFLDISLVDGFNIPMEFSPTSNACRSMRCTAPINEQCPNEL 161

Query: 87  QQPVPCSKPTSTAAT 88
           + P  C+ P +   T
Sbjct: 162 RAPGGCNNPCTVFRT 176

[Close]

BLAST of Cla97C01G003080 vs. NCBI nr
Match: XP_024993848.1 (thaumatin-like protein [Cynara cardunculus var. scolymus] >KVH95151.1 Thaumatin [Cynara cardunculus var. scolymus])

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04
Identity = 24/26 (92.31%), Postives = 24/26 (92.31%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL 53
           Y APPNTLAEYALNQYNNLDF DISL
Sbjct: 96  YGAPPNTLAEYALNQYNNLDFFDISL 121

[Close]

BLAST of Cla97C01G003080 vs. NCBI nr
Match: XP_022881237.1 (thaumatin-like protein [Olea europaea var. sylvestris])

HSP 1 Score: 54.3 bits (129), Expect = 3.7e-04
Identity = 24/26 (92.31%), Postives = 24/26 (92.31%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL 53
           Y APPNTLAEYALNQYNNLDF DISL
Sbjct: 100 YGAPPNTLAEYALNQYNNLDFFDISL 125

[Close]

BLAST of Cla97C01G003080 vs. NCBI nr
Match: XP_020217848.1 (protein P21-like isoform X1 [Cajanus cajan] >XP_020217849.1 protein P21-like isoform X2 [Cajanus cajan])

HSP 1 Score: 53.5 bits (127), Expect = 6.3e-04
Identity = 23/28 (82.14%), Postives = 24/28 (85.71%), Query Frame = 0


Query: 25  RRYAAPPNTLAEYALNQYNNLDFLDISL 53
           + Y  PPNTLAEYALNQYNNLDF DISL
Sbjct: 93  KAYGTPPNTLAEYALNQYNNLDFFDISL 120

[Close]

BLAST of Cla97C01G003080 vs. TrEMBL
Match: tr|A0A2K1R6Z9|A0A2K1R6Z9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T094200v3 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.7e-05
Identity = 50/124 (40.32%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL-----------PV--QCRHQR-------TMPEPA 86
           +  PPNTLAEYALNQ+NNLDF DISL           PV   CR  R         P P 
Sbjct: 118 FGKPPNTLAEYALNQFNNLDFFDISLVDGFNVPMDFSPVSGNCRGIRCAADINGQCPNPL 177

Query: 87  KASGRLQQPVPCSKPTSTAATPAIVGRLLFLSSSRIGALMHTVIPKMMIKLAPSLALVEP 131
           +ASG    P    K          V + + L  S  GAL   VI K M K APS   VE 
Sbjct: 178 RASGGCNNPCTVFKTDQYCCNSGTVAQQITLGFSSRGALTLIVILK-MTKQAPSPVPVEL 237

[Close]

BLAST of Cla97C01G003080 vs. TrEMBL
Match: tr|A0A022REB7|A0A022REB7_ERYGU (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013131mg PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.9e-04
Identity = 34/75 (45.33%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL------PVQ-------CRHQR-TMPEPAKASGRL 86
           Y  PPNTLAEYALNQ+NNLDFLDISL      P++       CR  R T P   +    L
Sbjct: 102 YGQPPNTLAEYALNQFNNLDFLDISLVDGFNIPMEFSPTSNACRSMRCTAPINEQCPNEL 161

Query: 87  QQPVPCSKPTSTAAT 88
           + P  C+ P +   T
Sbjct: 162 RAPGGCNNPCTVFRT 176

[Close]

BLAST of Cla97C01G003080 vs. TrEMBL
Match: tr|A0A103XQR1|A0A103XQR1_CYNCS (Thaumatin OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_002763 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.4e-04
Identity = 24/26 (92.31%), Postives = 24/26 (92.31%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL 53
           Y APPNTLAEYALNQYNNLDF DISL
Sbjct: 96  YGAPPNTLAEYALNQYNNLDFFDISL 121

[Close]

BLAST of Cla97C01G003080 vs. TrEMBL
Match: tr|M5WLE8|M5WLE8_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026060mg PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.2e-04
Identity = 23/31 (74.19%), Postives = 26/31 (83.87%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISLPVQCR 58
           +  PPNTLAEYALNQYNNLDF DISLP+  +
Sbjct: 99  HGLPPNTLAEYALNQYNNLDFFDISLPMSLK 129

[Close]

BLAST of Cla97C01G003080 vs. TrEMBL
Match: tr|A0A0L9VQQ3|A0A0L9VQQ3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g010600 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.5e-04
Identity = 23/28 (82.14%), Postives = 25/28 (89.29%), Query Frame = 0


Query: 25  RRYAAPPNTLAEYALNQYNNLDFLDISL 53
           R Y APPNTLAE+ALNQ+NNLDF DISL
Sbjct: 96  RAYGAPPNTLAEFALNQFNNLDFFDISL 123

[Close]

BLAST of Cla97C01G003080 vs. Swiss-Prot
Match: sp|P25096|P21_SOYBN (Protein P21 OS=Glycine max OX=3847 PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 3.9e-05
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 0


Query: 25  RRYAAPPNTLAEYALNQYNNLDFLDISL 53
           + Y APPNTLAEY LN +NNLDF DISL
Sbjct: 73  KAYGAPPNTLAEYGLNGFNNLDFFDISL 100

[Close]

BLAST of Cla97C01G003080 vs. Swiss-Prot
Match: sp|P81370|TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa OX=3627 GN=tlp PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 3.9e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL 53
           +  PPNTLAEYALNQ+NNLDF DISL
Sbjct: 98  FGQPPNTLAEYALNQFNNLDFFDISL 123

[Close]

BLAST of Cla97C01G003080 vs. Swiss-Prot
Match: sp|P50700|OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana OX=3702 GN=OSM34 PE=2 SV=2)

HSP 1 Score: 48.5 bits (114), Expect = 6.6e-05
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL 53
           +  PPNTLAEYALNQ+NNLDF DISL
Sbjct: 96  WGQPPNTLAEYALNQFNNLDFYDISL 121

[Close]

BLAST of Cla97C01G003080 vs. Swiss-Prot
Match: sp|P25871|OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum OX=4097 GN=OLPA PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.3e-04
Identity = 29/75 (38.67%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL----PVQCRHQRTMPEPAK-------------AS 85
           +  PPNTLAEYALNQ++NLDF DIS+     +      T P P K               
Sbjct: 97  WGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECP 156

[Close]

BLAST of Cla97C01G003080 vs. Swiss-Prot
Match: sp|E3SU11|ALL13_OLEEU (Thaumatin-like protein OS=Olea europaea OX=4146 PE=1 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.3e-04
Identity = 20/25 (80.00%), Postives = 22/25 (88.00%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDIS 52
           Y  PPNTLAE+ALNQ NNLDF+DIS
Sbjct: 98  YGRPPNTLAEFALNQPNNLDFVDIS 122

[Close]

BLAST of Cla97C01G003080 vs. TAIR10
Match: AT4G11650.1 (osmotin 34)

HSP 1 Score: 48.5 bits (114), Expect = 3.7e-06
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0


Query: 27  YAAPPNTLAEYALNQYNNLDFLDISL 53
           +  PPNTLAEYALNQ+NNLDF DISL
Sbjct: 96  WGQPPNTLAEYALNQFNNLDFYDISL 121

The following BLAST results are available for this feature:

BLAST of Cla97C01G003080 vs. NCBI nr


Match Name	E-value	Identity	Description
PNS23055.1	2.6e-05	40.32	hypothetical protein POPTR_T094200v3 [Populus trichocarpa]	[more]
XP_012836299.1	2.8e-04	45.33	PREDICTED: thaumatin-like protein [Erythranthe guttata] >EYU38379.1 hypothetical...	[more]
XP_024993848.1	3.7e-04	92.31	thaumatin-like protein [Cynara cardunculus var. scolymus] >KVH95151.1 Thaumatin ...	[more]
XP_022881237.1	3.7e-04	92.31	thaumatin-like protein [Olea europaea var. sylvestris]	[more]
XP_020217848.1	6.3e-04	82.14	protein P21-like isoform X1 [Cajanus cajan] >XP_020217849.1 protein P21-like iso...	[more]

BLAST of Cla97C01G003080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2K1R6Z9\|A0A2K1R6Z9_POPTR	1.7e-05	40.32	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_T094200v3 PE=4 S...	[more]
tr\|A0A022REB7\|A0A022REB7_ERYGU	1.9e-04	45.33	Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a013131mg PE...	[more]
tr\|A0A103XQR1\|A0A103XQR1_CYNCS	2.4e-04	92.31	Thaumatin OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_002763 PE=4 SV=1	[more]
tr\|M5WLE8\|M5WLE8_PRUPE	3.2e-04	74.19	Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026060m...	[more]
tr\|A0A0L9VQQ3\|A0A0L9VQQ3_PHAAN	5.5e-04	82.14	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g010600 PE...	[more]

BLAST of Cla97C01G003080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P25096\|P21_SOYBN	3.9e-05	75.00	Protein P21 OS=Glycine max OX=3847 PE=1 SV=1	[more]
sp\|P81370\|TLP_ACTDE	3.9e-05	80.77	Thaumatin-like protein OS=Actinidia deliciosa OX=3627 GN=tlp PE=1 SV=2	[more]
sp\|P50700\|OSL3_ARATH	6.6e-05	80.77	Osmotin-like protein OSM34 OS=Arabidopsis thaliana OX=3702 GN=OSM34 PE=2 SV=2	[more]
sp\|P25871\|OLPA_TOBAC	3.3e-04	38.67	Osmotin-like protein OS=Nicotiana tabacum OX=4097 GN=OLPA PE=1 SV=1	[more]
sp\|E3SU11\|ALL13_OLEEU	4.3e-04	80.00	Thaumatin-like protein OS=Olea europaea OX=4146 PE=1 SV=1	[more]

BLAST of Cla97C01G003080 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G11650.1	3.7e-06	80.77	osmotin 34	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR037176	Osmotin/thaumatin-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla97C01G003080.1	Cla97C01G003080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037176	Osmotin/thaumatin-like superfamily	SUPERFAMILY	SSF49870	Osmotin, thaumatin-like protein	coord: 27..86

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla97C01G003080	Cla011475	Watermelon (97103) v1	wmwmbB235
Cla97C01G003080	ClCG01G003000	Watermelon (Charleston Gray)	wcgwmbB089

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla97C01G003080	Watermelon (97103) v2	wmbwmbB023
Cla97C01G003080	Silver-seed gourd	carwmbB0963
Cla97C01G003080	Silver-seed gourd	carwmbB0980
Cla97C01G003080	Cucumber (Gy14) v2	cgybwmbB172
Cla97C01G003080	Cucumber (Gy14) v2	cgybwmbB319
Cla97C01G003080	Cucumber (Gy14) v1	cgywmbB520
Cla97C01G003080	Cucurbita maxima (Rimu)	cmawmbB288
Cla97C01G003080	Cucurbita maxima (Rimu)	cmawmbB330
Cla97C01G003080	Cucurbita maxima (Rimu)	cmawmbB403
Cla97C01G003080	Cucurbita maxima (Rimu)	cmawmbB600
Cla97C01G003080	Cucurbita moschata (Rifu)	cmowmbB270
Cla97C01G003080	Cucurbita moschata (Rifu)	cmowmbB313
Cla97C01G003080	Cucurbita moschata (Rifu)	cmowmbB387
Cla97C01G003080	Cucurbita moschata (Rifu)	cmowmbB575
Cla97C01G003080	Wild cucumber (PI 183967)	cpiwmbB181
Cla97C01G003080	Wild cucumber (PI 183967)	cpiwmbB349
Cla97C01G003080	Cucumber (Chinese Long) v3	cucwmbB179
Cla97C01G003080	Cucumber (Chinese Long) v3	cucwmbB351
Cla97C01G003080	Cucumber (Chinese Long) v2	cuwmbB179
Cla97C01G003080	Cucumber (Chinese Long) v2	cuwmbB336
Cla97C01G003080	Bottle gourd (USVL1VR-Ls)	lsiwmbB007
Cla97C01G003080	Bottle gourd (USVL1VR-Ls)	lsiwmbB315
Cla97C01G003080	Melon (DHL92) v3.6.1	medwmbB006
Cla97C01G003080	Melon (DHL92) v3.6.1	medwmbB412
Cla97C01G003080	Melon (DHL92) v3.5.1	mewmbB008
Cla97C01G003080	Melon (DHL92) v3.5.1	mewmbB424
Cla97C01G003080	Watermelon (Charleston Gray)	wcgwmbB214
Cla97C01G003080	Watermelon (97103) v1	wmwmbB193
Cla97C01G003080	Wax gourd	wgowmbB061
Cla97C01G003080	Wax gourd	wgowmbB165