Cla97C01G002390 (gene) Watermelon (97103) v2

Overview
NameCla97C01G002390
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
Descriptionheavy metal-associated isoprenylated plant protein 3-like
LocationCla97Chr01 : 2166837 .. 2167511 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCGCTATGAACATGAAAGACAAAAAGTTGAGAGCGATTGTGGAGACGTAGATCCTATTGATGTCGTTGCTAAGGTTCAAAAGCATTGGCCAAACGTTGACATCGTCAGCATGGCCCGGCAAAGAAAGAGAAGAAGGACCAAAACAAATGAAAAGATGGAAGAGCTGCATGGTTATACTCTTAATTATGATGTGTACGGCGAAGAGGTGAATCAAAACTCTTGTGTCATAAGCTAGAATTATTAATATATTGTCCCTACATTAGAGAGACTATTATCAAACTGCAAAAATTAAATTCTAATAATAAACCATAAGAACTACAATAATTCAACCATAAAACGGTTTTGTTTCGTACGCCTGATGTGCCAACAATTTTAAAAGGACAATTGAAACTTGCTTAGGTATTAGAGAGACAGCTATTGTTATTGTTGAATAACATTTTAATTCACTTTTAATCATTTGTAACATGATCAGAAATGAAGATAATATTTCTAAATATTTAAAACATTTTTTTCATCTTTAAATTTTACGGAAAAAATAAAAAAATCATGACCATTAGGAAAACATGTACCACGAGTGTATAAGTATGGACAAGGAGAGTACATATCAATTATTGATGAGTTATGCTTATGTTGACTTGAAATTATTCATTAATGTTATTAAGGTTGTTAA

mRNA sequence

ATGAATCGCTATGAACATGAAAGACAAAAAGTTGAGAGCGATTGTGGAGACGTAGATCCTATTGATGTCGTTGCTAAGGTTCAAAAGCATTGGCCAAACGTTGACATCGTCAGCATGGCCCGGCAAAGAAAGAGAAGAAGGACCAAAACAAATGAAAAGATGGAAGAGCTGCATGGTTGTTAA

Coding sequence (CDS)

ATGAATCGCTATGAACATGAAAGACAAAAAGTTGAGAGCGATTGTGGAGACGTAGATCCTATTGATGTCGTTGCTAAGGTTCAAAAGCATTGGCCAAACGTTGACATCGTCAGCATGGCCCGGCAAAGAAAGAGAAGAAGGACCAAAACAAATGAAAAGATGGAAGAGCTGCATGGTTGTTAA

Protein sequence

MNRYEHERQKVESDCGDVDPIDVVAKVQKHWPNVDIVSMARQRKRRRTKTNEKMEELHGC
Homology
[Close]
BLAST of Cla97C01G002390 vs. NCBI nr
Match: XP_008437334.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis melo])

HSP 1 Score: 52.4 bits (124), Expect = 6.3e-04
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 16 GDVDPIDVVAKVQKHWPNVDIVSMARQRKR--RRTKTNEKME 56
          GDVDP+DVVAKV+KHWPN DIV  A++ K   + TK  EK E
Sbjct: 45 GDVDPVDVVAKVRKHWPNADIVGPAKEEKNATQETKPKEKGE 86

[Close]
BLAST of Cla97C01G002390 vs. TrEMBL
Match: tr|A0A1S3AUD2|A0A1S3AUD2_CUCME (heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=3656 GN=LOC103482786 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.2e-04
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 16 GDVDPIDVVAKVQKHWPNVDIVSMARQRKR--RRTKTNEKME 56
          GDVDP+DVVAKV+KHWPN DIV  A++ K   + TK  EK E
Sbjct: 45 GDVDPVDVVAKVRKHWPNADIVGPAKEEKNATQETKPKEKGE 86

The following BLAST results are available for this feature:
BLAST of Cla97C01G002390 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008437334.16.3e-0461.90PREDICTED: heavy metal-associated isoprenylated plant protein 3-like [Cucumis me... [more]
BLAST of Cla97C01G002390 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AUD2|A0A1S3AUD2_CUCME4.2e-0461.90heavy metal-associated isoprenylated plant protein 3-like OS=Cucumis melo OX=365... [more]
BLAST of Cla97C01G002390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cla97C01G002390 vs. TAIR10
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
molecular_function GO:0046872 metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G002390.1Cla97C01G002390.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G002390Watermelon (97103) v2wmbwmbB019
Cla97C01G002390Watermelon (97103) v2wmbwmbB027
Cla97C01G002390Watermelon (97103) v2wmbwmbB029
Cla97C01G002390Silver-seed gourdcarwmbB0616
Cla97C01G002390Silver-seed gourdcarwmbB0963
Cla97C01G002390Silver-seed gourdcarwmbB0980
Cla97C01G002390Cucumber (Gy14) v2cgybwmbB168
Cla97C01G002390Cucumber (Gy14) v2cgybwmbB256
Cla97C01G002390Cucumber (Gy14) v2cgybwmbB319
Cla97C01G002390Cucumber (Gy14) v2cgybwmbB395
Cla97C01G002390Cucumber (Gy14) v1cgywmbB143
Cla97C01G002390Cucumber (Gy14) v1cgywmbB222
Cla97C01G002390Cucumber (Gy14) v1cgywmbB520
Cla97C01G002390Cucurbita maxima (Rimu)cmawmbB288
Cla97C01G002390Cucurbita maxima (Rimu)cmawmbB326
Cla97C01G002390Cucurbita maxima (Rimu)cmawmbB358
Cla97C01G002390Cucurbita maxima (Rimu)cmawmbB600
Cla97C01G002390Cucurbita maxima (Rimu)cmawmbB706
Cla97C01G002390Cucurbita moschata (Rifu)cmowmbB270
Cla97C01G002390Cucurbita moschata (Rifu)cmowmbB311
Cla97C01G002390Cucurbita moschata (Rifu)cmowmbB575
Cla97C01G002390Cucurbita moschata (Rifu)cmowmbB677
Cla97C01G002390Cucurbita moschata (Rifu)cmowmbB880
Cla97C01G002390Wild cucumber (PI 183967)cpiwmbB179
Cla97C01G002390Wild cucumber (PI 183967)cpiwmbB276
Cla97C01G002390Wild cucumber (PI 183967)cpiwmbB349
Cla97C01G002390Wild cucumber (PI 183967)cpiwmbB435
Cla97C01G002390Cucumber (Chinese Long) v3cucwmbB177
Cla97C01G002390Cucumber (Chinese Long) v3cucwmbB270
Cla97C01G002390Cucumber (Chinese Long) v3cucwmbB351
Cla97C01G002390Cucumber (Chinese Long) v3cucwmbB431
Cla97C01G002390Cucumber (Chinese Long) v2cuwmbB176
Cla97C01G002390Cucumber (Chinese Long) v2cuwmbB269
Cla97C01G002390Cucumber (Chinese Long) v2cuwmbB336
Cla97C01G002390Cucumber (Chinese Long) v2cuwmbB414
Cla97C01G002390Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G002390Bottle gourd (USVL1VR-Ls)lsiwmbB008
Cla97C01G002390Bottle gourd (USVL1VR-Ls)lsiwmbB321
Cla97C01G002390Melon (DHL92) v3.6.1medwmbB006
Cla97C01G002390Melon (DHL92) v3.6.1medwmbB075
Cla97C01G002390Melon (DHL92) v3.6.1medwmbB409
Cla97C01G002390Melon (DHL92) v3.6.1medwmbB449
Cla97C01G002390Melon (DHL92) v3.5.1mewmbB008
Cla97C01G002390Melon (DHL92) v3.5.1mewmbB080
Cla97C01G002390Melon (DHL92) v3.5.1mewmbB423
Cla97C01G002390Melon (DHL92) v3.5.1mewmbB455
Cla97C01G002390Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G002390Watermelon (Charleston Gray)wcgwmbB255
Cla97C01G002390Watermelon (Charleston Gray)wcgwmbB212
Cla97C01G002390Watermelon (97103) v1wmwmbB189
Cla97C01G002390Watermelon (97103) v1wmwmbB235
Cla97C01G002390Wax gourdwgowmbB061