Cla97C01G000280 (gene) Watermelon (97103) v2

Overview
NameCla97C01G000280
Typegene
OrganismCitrullus lanatus (Watermelon (97103) v2)
DescriptionProtein yippee-like
LocationCla97Chr01 : 150229 .. 150942 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGTATTGGAATCCTACATATAGCTGTAGAAATTGCCGCAATCCTCTTGCCTCCGGAGCCCATCTCCTTTCTAAATCCTTCTGGGTAAACCCTATCTAACTCATCTATATATATCCACTTTTCTTATTCATCTTTTTACATCCCAAAAACACTAAACCCTCTTTATGCTATACAAATTTATACTCAACTTGACTCTTGACTTGGATATATATGTTACATTTAGCTAGCATGTATTAGGGAAATAAAACAATTGAGCTATGCTTAAGGATGTATAAAAAAATGTATAGGGTGATTGATATTTATATATTAGATCATGCATGAATCAAGCCAAGCGAGCACATATTTTGTCATCTGCATAGTATTACTTACATATCATAATTACTCACACCGTGCGGTACTATGTCCAACACACTTTAGTGCGTCTATGTCAAATTTGGATCAAAGTAGTGACAAATTCATCAAAACGGTGCAGAGTAATCTGATCATGTGTTGATATTTGACTCATTTAGCGGACCCAATCTATGCCCTCTCGATTAGACTCACGCATCAATAATGAGTAGATAGTATTAAAAGATGAAATTGAGTAAAAAGAAAATGGAAGTGAAGAATTGGAGGAGTTGTGTGTGATAATTGCAGGCAAAATCAGGGAAAGCATTCCTATTCTCAGAAGCAAAGAACATAGTGGAGCAAAAGAACAGAAGTAGCTGA

mRNA sequence

ATGGCGGAGTATTGGAATCCTACATATAGCTGTAGAAATTGCCGCAATCCTCTTGCCTCCGGAGCCCATCTCCTTTCTAAATCCTTCTGGGCAAAATCAGGGAAAGCATTCCTATTCTCAGAAGCAAAGAACATAGTGGAGCAAAAGAACAGAAGTAGCTGA

Coding sequence (CDS)

ATGGCGGAGTATTGGAATCCTACATATAGCTGTAGAAATTGCCGCAATCCTCTTGCCTCCGGAGCCCATCTCCTTTCTAAATCCTTCTGGGCAAAATCAGGGAAAGCATTCCTATTCTCAGAAGCAAAGAACATAGTGGAGCAAAAGAACAGAAGTAGCTGA

Protein sequence

MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVEQKNRSS
Homology
[Close]
BLAST of Cla97C01G000280 vs. NCBI nr
Match: XP_004145944.1 (PREDICTED: protein yippee-like At4g27740 [Cucumis sativus] >KGN49847.1 hypothetical protein Csa_5G139250 [Cucumis sativus])

HSP 1 Score: 93.2 bits (230), Expect = 2.8e-16
Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVE 48
          MAEY NPTYSCRNCRNPLASGAHLLSKSF AKSGKAFLFSEAKNIVE
Sbjct: 1  MAEYSNPTYSCRNCRNPLASGAHLLSKSFLAKSGKAFLFSEAKNIVE 47

[Close]
BLAST of Cla97C01G000280 vs. NCBI nr
Match: XP_022137891.1 (protein yippee-like At4g27740 [Momordica charantia])

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-13
Identity = 39/47 (82.98%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVE 48
          MAEY  P+YSCRNCRNPLASG HLLSKS+ AKSG+A+LFSEAKNIVE
Sbjct: 1  MAEYSRPSYSCRNCRNPLASGIHLLSKSYLAKSGQAYLFSEAKNIVE 47

[Close]
BLAST of Cla97C01G000280 vs. NCBI nr
Match: XP_022958310.1 (protein yippee-like At4g27740 [Cucurbita moschata])

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-13
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVE 48
          MAEY N TYSCR+CRNPLASGA LLSKSF AKSGKAFLFS+AKNIVE
Sbjct: 1  MAEYSNTTYSCRSCRNPLASGADLLSKSFLAKSGKAFLFSQAKNIVE 47

[Close]
BLAST of Cla97C01G000280 vs. NCBI nr
Match: XP_023532447.1 (protein yippee-like At4g27740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-13
Identity = 41/47 (87.23%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVE 48
          MAEY N TYSCR+CRNPLASGA LLSKSF AKSGKAFLFS+AKNIVE
Sbjct: 1  MAEYSNTTYSCRSCRNPLASGADLLSKSFLAKSGKAFLFSQAKNIVE 47

[Close]
BLAST of Cla97C01G000280 vs. NCBI nr
Match: XP_002275349.1 (PREDICTED: protein yippee-like At4g27740 [Vitis vinifera] >XP_010662903.1 PREDICTED: protein yippee-like At4g27740 [Vitis vinifera] >CBI23046.3 unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 62.0 bits (149), Expect = 7.0e-07
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 7  PTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          PT+SCRNCRNP+A    L+SK FW KSG+AFLF  A NIV
Sbjct: 9  PTFSCRNCRNPVAFWQDLISKDFWGKSGRAFLFHHAMNIV 48

[Close]
BLAST of Cla97C01G000280 vs. TrEMBL
Match: tr|A0A0A0KN57|A0A0A0KN57_CUCSA (Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_5G139250 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-16
Identity = 45/47 (95.74%), Postives = 45/47 (95.74%), Query Frame = 0 

Query: 1  MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVE 48
          MAEY NPTYSCRNCRNPLASGAHLLSKSF AKSGKAFLFSEAKNIVE
Sbjct: 1  MAEYSNPTYSCRNCRNPLASGAHLLSKSFLAKSGKAFLFSEAKNIVE 47

[Close]
BLAST of Cla97C01G000280 vs. TrEMBL
Match: tr|E0CV85|E0CV85_VITVI (Protein yippee-like OS=Vitis vinifera OX=29760 GN=VIT_16s0098g01380 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.6e-07
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0 

Query: 7  PTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          PT+SCRNCRNP+A    L+SK FW KSG+AFLF  A NIV
Sbjct: 9  PTFSCRNCRNPVAFWQDLISKDFWGKSGRAFLFHHAMNIV 48

[Close]
BLAST of Cla97C01G000280 vs. TrEMBL
Match: tr|A0A165ZMC4|A0A165ZMC4_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008960 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.0e-06
Identity = 29/46 (63.04%), Postives = 33/46 (71.74%), Query Frame = 0 

Query: 1  MAEYWNPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          M  Y +P YSCR CR P+A    LLSKSF AKSGKAF+FS+A N V
Sbjct: 1  MESYSHPLYSCRKCRTPVALAEDLLSKSFVAKSGKAFMFSQAMNTV 46

[Close]
BLAST of Cla97C01G000280 vs. TrEMBL
Match: tr|B9I1Z6|B9I1Z6_POPTR (Protein yippee-like OS=Populus trichocarpa OX=3694 GN=POPTR_012G019200v3 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-06
Identity = 27/41 (65.85%), Postives = 32/41 (78.05%), Query Frame = 0 

Query: 6  NPTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          NP YSCRNCRNPLA    LLSKS+ A+SG+A++FS   NIV
Sbjct: 7  NPLYSCRNCRNPLAFSTDLLSKSYQARSGQAYMFSHVMNIV 47

[Close]
BLAST of Cla97C01G000280 vs. TrEMBL
Match: tr|A0A2P4LZQ7|A0A2P4LZQ7_QUESU (Protein yippee-like OS=Quercus suber OX=58331 GN=CFP56_03467 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-06
Identity = 26/40 (65.00%), Postives = 32/40 (80.00%), Query Frame = 0 

Query: 7  PTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          P +SCRNC+NPLA  + LLSK+FW KSG A+LFS A NI+
Sbjct: 8  PLFSCRNCQNPLALRSDLLSKNFWGKSGPAYLFSHAMNII 47

[Close]
BLAST of Cla97C01G000280 vs. Swiss-Prot
Match: sp|Q2V3E2|YIPL5_ARATH (Protein yippee-like At4g27740 OS=Arabidopsis thaliana OX=3702 GN=At4g27740 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 2.1e-07
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 7  PTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          PTY CRNC NPLA G  L+SK F   SG AF+FS A N+V
Sbjct: 8  PTYFCRNCENPLALGEDLISKKFVGASGPAFMFSHAMNVV 47

[Close]
BLAST of Cla97C01G000280 vs. Swiss-Prot
Match: sp|Q9T096|YIPL6_ARATH (Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 SV=2)

HSP 1 Score: 44.7 bits (104), Expect = 3.8e-04
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0 

Query: 9  YSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          YSC NCRN +     ++SK+F  ++G+AFLFS A NIV
Sbjct: 10 YSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIV 47

[Close]
BLAST of Cla97C01G000280 vs. TAIR10
Match: AT4G27740.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-08
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0 

Query: 7  PTYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          PTY CRNC NPLA G  L+SK F   SG AF+FS A N+V
Sbjct: 8  PTYFCRNCENPLALGEDLISKKFVGASGPAFMFSHAMNVV 47

[Close]
BLAST of Cla97C01G000280 vs. TAIR10
Match: AT4G27745.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 44.7 bits (104), Expect = 2.1e-05
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0 

Query: 9  YSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIV 47
          YSC NCRN +     ++SK+F  ++G+AFLFS A NIV
Sbjct: 10 YSCCNCRNHVGLHDDIISKAFQGRTGRAFLFSHAMNIV 47

[Close]
BLAST of Cla97C01G000280 vs. TAIR10
Match: AT2G40110.1 (Yippee family putative zinc-binding protein)

HSP 1 Score: 42.0 bits (97), Expect = 1.4e-04
Identity = 17/37 (45.95%), Postives = 27/37 (72.97%), Query Frame = 0 

Query: 9  YSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNI 46
          YSC++C+  LA+   ++SKSF  K GKA+LF++  N+
Sbjct: 14 YSCKHCKTHLATYEDIISKSFHCKHGKAYLFNKVANV 50

[Close]
BLAST of Cla97C01G000280 vs. TAIR10
Match: AT3G11230.2 (Yippee family putative zinc-binding protein)

HSP 1 Score: 40.4 bits (93), Expect = 4.0e-04
Identity = 18/42 (42.86%), Postives = 29/42 (69.05%), Query Frame = 0 

Query: 8  TYSCRNCRNPLASGAHLLSKSFWAKSGKAFLFSEAKNIVEQK 50
          +YSC++C+  LA    ++SKSF ++ GKA+LFS+  N+   K
Sbjct: 46 SYSCKHCKTNLALCDDVVSKSFQSRHGKAYLFSKVVNVYAGK 87

The following BLAST results are available for this feature:
BLAST of Cla97C01G000280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145944.12.8e-1695.74PREDICTED: protein yippee-like At4g27740 [Cucumis sativus] >KGN49847.1 hypotheti... [more]
XP_022137891.12.3e-1382.98protein yippee-like At4g27740 [Momordica charantia][more]
XP_022958310.12.3e-1387.23protein yippee-like At4g27740 [Cucurbita moschata][more]
XP_023532447.12.3e-1387.23protein yippee-like At4g27740 [Cucurbita pepo subsp. pepo][more]
XP_002275349.17.0e-0767.50PREDICTED: protein yippee-like At4g27740 [Vitis vinifera] >XP_010662903.1 PREDIC... [more]
BLAST of Cla97C01G000280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KN57|A0A0A0KN57_CUCSA1.9e-1695.74Protein yippee-like OS=Cucumis sativus OX=3659 GN=Csa_5G139250 PE=3 SV=1[more]
tr|E0CV85|E0CV85_VITVI4.6e-0767.50Protein yippee-like OS=Vitis vinifera OX=29760 GN=VIT_16s0098g01380 PE=3 SV=1[more]
tr|A0A165ZMC4|A0A165ZMC4_DAUCA1.0e-0663.04Uncharacterized protein OS=Daucus carota subsp. sativus OX=79200 GN=DCAR_008960 ... [more]
tr|B9I1Z6|B9I1Z6_POPTR1.4e-0665.85Protein yippee-like OS=Populus trichocarpa OX=3694 GN=POPTR_012G019200v3 PE=3 SV... [more]
tr|A0A2P4LZQ7|A0A2P4LZQ7_QUESU1.4e-0665.00Protein yippee-like OS=Quercus suber OX=58331 GN=CFP56_03467 PE=4 SV=1[more]
BLAST of Cla97C01G000280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q2V3E2|YIPL5_ARATH2.1e-0762.50Protein yippee-like At4g27740 OS=Arabidopsis thaliana OX=3702 GN=At4g27740 PE=3 ... [more]
sp|Q9T096|YIPL6_ARATH3.8e-0452.63Protein yippee-like At4g27745 OS=Arabidopsis thaliana OX=3702 GN=At4g27745 PE=3 ... [more]
BLAST of Cla97C01G000280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27740.11.2e-0862.50Yippee family putative zinc-binding protein[more]
AT4G27745.12.1e-0552.63Yippee family putative zinc-binding protein[more]
AT2G40110.11.4e-0445.95Yippee family putative zinc-binding protein[more]
AT3G11230.24.0e-0442.86Yippee family putative zinc-binding protein[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR034751Yippee
IPR039058Yippee_fam
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0033743 peptide-methionine (R)-S-oxide reductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla97C01G000280.1Cla97C01G000280.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon 97103 v2
Date Performed: 2019-05-12
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039058Yippee familyPANTHERPTHR13848FAMILY NOT NAMEDcoord: 6..49
NoneNo IPR availablePANTHERPTHR13848:SF19SUBFAMILY NOT NAMEDcoord: 6..49
IPR034751Yippee domainPROSITEPS51792YIPPEEcoord: 7..53
score: 15.921

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla97C01G000280Cla004877Watermelon (97103) v1wmwmbB235
Cla97C01G000280Csa5G139250Cucumber (Chinese Long) v2cuwmbB347
Cla97C01G000280MELO3C005899Melon (DHL92) v3.5.1mewmbB006
Cla97C01G000280ClCG01G000240Watermelon (Charleston Gray)wcgwmbB089
Cla97C01G000280CSPI05G03010Wild cucumber (PI 183967)cpiwmbB362
Cla97C01G000280Cucsa.202270Cucumber (Gy14) v1cgywmbB378
Cla97C01G000280MELO3C005899.2Melon (DHL92) v3.6.1medwmbB004
Cla97C01G000280CsaV3_5G000340Cucumber (Chinese Long) v3cucwmbB363
Cla97C01G000280Bhi12G000580Wax gourdwgowmbB062
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla97C01G000280Watermelon (Charleston Gray)wcgwmbB210
Cla97C01G000280Watermelon (Charleston Gray)wcgwmbB213
Cla97C01G000280Watermelon (97103) v1wmwmbB187
Cla97C01G000280Watermelon (97103) v1wmwmbB192
Cla97C01G000280Wax gourdwgowmbB168
Cla97C01G000280Watermelon (97103) v2wmbwmbB016
Cla97C01G000280Watermelon (97103) v2wmbwmbB022
Cla97C01G000280Silver-seed gourdcarwmbB0529
Cla97C01G000280Silver-seed gourdcarwmbB0563
Cla97C01G000280Silver-seed gourdcarwmbB0602
Cla97C01G000280Silver-seed gourdcarwmbB1040
Cla97C01G000280Silver-seed gourdcarwmbB1044
Cla97C01G000280Cucumber (Gy14) v2cgybwmbB166
Cla97C01G000280Cucumber (Gy14) v2cgybwmbB169
Cla97C01G000280Cucumber (Gy14) v2cgybwmbB319
Cla97C01G000280Cucumber (Gy14) v2cgybwmbB330
Cla97C01G000280Cucumber (Gy14) v1cgywmbB002
Cla97C01G000280Cucumber (Gy14) v1cgywmbB379
Cla97C01G000280Cucumber (Gy14) v1cgywmbB445
Cla97C01G000280Cucurbita maxima (Rimu)cmawmbB247
Cla97C01G000280Cucurbita maxima (Rimu)cmawmbB284
Cla97C01G000280Cucurbita maxima (Rimu)cmawmbB324
Cla97C01G000280Cucurbita maxima (Rimu)cmawmbB400
Cla97C01G000280Cucurbita maxima (Rimu)cmawmbB604
Cla97C01G000280Cucurbita moschata (Rifu)cmowmbB227
Cla97C01G000280Cucurbita moschata (Rifu)cmowmbB266
Cla97C01G000280Cucurbita moschata (Rifu)cmowmbB307
Cla97C01G000280Cucurbita moschata (Rifu)cmowmbB385
Cla97C01G000280Cucurbita moschata (Rifu)cmowmbB580
Cla97C01G000280Cucurbita moschata (Rifu)cmowmbB810
Cla97C01G000280Wild cucumber (PI 183967)cpiwmbB176
Cla97C01G000280Wild cucumber (PI 183967)cpiwmbB177
Cla97C01G000280Wild cucumber (PI 183967)cpiwmbB349
Cla97C01G000280Cucumber (Chinese Long) v3cucwmbB174
Cla97C01G000280Cucumber (Chinese Long) v3cucwmbB175
Cla97C01G000280Cucumber (Chinese Long) v3cucwmbB351
Cla97C01G000280Cucumber (Chinese Long) v2cuwmbB173
Cla97C01G000280Cucumber (Chinese Long) v2cuwmbB174
Cla97C01G000280Cucumber (Chinese Long) v2cuwmbB336
Cla97C01G000280Bottle gourd (USVL1VR-Ls)lsiwmbB007
Cla97C01G000280Bottle gourd (USVL1VR-Ls)lsiwmbB318
Cla97C01G000280Bottle gourd (USVL1VR-Ls)lsiwmbB319
Cla97C01G000280Melon (DHL92) v3.6.1medwmbB006
Cla97C01G000280Melon (DHL92) v3.6.1medwmbB407
Cla97C01G000280Melon (DHL92) v3.6.1medwmbB413
Cla97C01G000280Melon (DHL92) v3.5.1mewmbB008
Cla97C01G000280Melon (DHL92) v3.5.1mewmbB421
Cla97C01G000280Melon (DHL92) v3.5.1mewmbB425