Cla023305 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla023305
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Bidirectional sugar transporter N3 (AHRD V1 ***- NOD3_MEDTR); contains Interpro domain(s) IPR018179 RAG1-activating protein 1 homologue IPR004316 RAG1-activating protein-1-related
Location	Chr11 : 19413857 .. 19414641 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGTCGTGACTGTCAATTCAATCGGTGCGGTTTTTCAGTTAGTGTACATCATGCTCTTCATAGCATATGCTGAGAAGGGGAAAAAGGTGGTTACTTGTTTGCCTATAATATGTACTGGCTAATTGTCCTTATGAATGATGGGAGATTGTGAAAGATCTTACTTATTGAACTTTTCCCTTCATGTCTGTGACAGATAAAAATGCTAGGATTGTTGCTTGCAGTCTTTGGCCTTTTTATAGTTATTGTTGTTGGGAGCTTACAAATAACTGACCTCCCTTTGCGACGGAACGTCGTCGGGATTTTGAGTTGTGCATCTCTCGTTTCAATGTTCGCTTCTCCCTTGTTTATTATCGTAAGTCTATATTTTTTAAGCTTCTTTTCAATCTTTTGTTGGTAGATGTTTCAAAAGGTTTGCTTACATTTCTTATCCCTTCAATTTTCCTTGGCATGCTCTCAGAATTTGGTGATCCGAACAAAGAGTGTGGAGTTTATGCCATTTTATCTCTCCCTTTCGACCTTCCTCATGAGCATATCTTTCTTCCTTTATGGACTGTTCAATTACGACCTGTTCGTTTATGTAAGCATTATCCTACCATTTCCTTCGTTCATCGTGATTTTACTCGATTGAGTATGCGACGTGAATATGTATTTTGTTGTCAAACTTCAGGCCCCAAATGGGATAGGAGCCGTGTTGGGGATAGTTCAATTGGTGTTGTACTGCTACTACAGTCGAGTTGCCAAAGAGGAGTCTAGAGAACCTTTAATCATATCCTATGCATAA

mRNA sequence

ATGATGGTCGTGACTGTCAATTCAATCGGTGCGGTTTTTCAGTTAGTGTACATCATGCTCTTCATAGCATATGCTGAGAAGGGGAAAAAGATAAAAATGCTAGGATTGTTGCTTGCAGTCTTTGGCCTTTTTATAGTTATTGTTGTTGGGAGCTTACAAATAACTGACCTCCCTTTGCGACGGAACGTCGTCGGGATTTTGAGTTGTGCATCTCTCGTTTCAATGTTCGCTTCTCCCTTGTTTATTATCAATTTGGTGATCCGAACAAAGAGTGTGGAGTTTATGCCATTTTATCTCTCCCTTTCGACCTTCCTCATGAGCATATCTTTCTTCCTTTATGGACTGTTCAATTACGACCTGTTCGTTTATGCCCCAAATGGGATAGGAGCCGTGTTGGGGATAGTTCAATTGGTGTTGTACTGCTACTACAGTCGAGTTGCCAAAGAGGAGTCTAGAGAACCTTTAATCATATCCTATGCATAA

Coding sequence (CDS)

ATGATGGTCGTGACTGTCAATTCAATCGGTGCGGTTTTTCAGTTAGTGTACATCATGCTCTTCATAGCATATGCTGAGAAGGGGAAAAAGATAAAAATGCTAGGATTGTTGCTTGCAGTCTTTGGCCTTTTTATAGTTATTGTTGTTGGGAGCTTACAAATAACTGACCTCCCTTTGCGACGGAACGTCGTCGGGATTTTGAGTTGTGCATCTCTCGTTTCAATGTTCGCTTCTCCCTTGTTTATTATCAATTTGGTGATCCGAACAAAGAGTGTGGAGTTTATGCCATTTTATCTCTCCCTTTCGACCTTCCTCATGAGCATATCTTTCTTCCTTTATGGACTGTTCAATTACGACCTGTTCGTTTATGCCCCAAATGGGATAGGAGCCGTGTTGGGGATAGTTCAATTGGTGTTGTACTGCTACTACAGTCGAGTTGCCAAAGAGGAGTCTAGAGAACCTTTAATCATATCCTATGCATAA

Protein sequence

MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLFVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISYA

Homology

[Close]

BLAST of Cla023305 vs. Swiss-Prot
Match: SWET2_ARATH (Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.4e-56
Identity = 113/159 (71.07%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 2   MVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRR 61
           M++TVNS+GA FQL YI+LFI + +K  K+KMLGLL  VF +  VIV GSLQI D   R 
Sbjct: 77  MLMTVNSVGATFQLCYIILFIMHTDKKNKMKMLGLLFVVFAVVGVIVAGSLQIPDQLTRW 136

Query: 62  NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF 121
             VG LSC SLVSMFASPLF+INLVIRTKSVEFMPFYLSLSTFLMS SF LYGLFN D F
Sbjct: 137 YFVGFLSCGSLVSMFASPLFVINLVIRTKSVEFMPFYLSLSTFLMSASFLLYGLFNSDAF 196

Query: 122 VYAPNGIGAVLGIVQLVLYCYYSRVA-KEESREPLIISY 160
           VY PNGIG +LGIVQL LYCYY R + +EE++EPLI+SY
Sbjct: 197 VYTPNGIGTILGIVQLALYCYYHRNSIEEETKEPLIVSY 235

[Close]

BLAST of Cla023305 vs. Swiss-Prot
Match: SWT2A_SORBI (Bidirectional sugar transporter SWEET2a OS=Sorghum bicolor GN=SWEET2A PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 94/159 (59.12%), Postives = 120/159 (75.47%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++V TVNSIGAVFQL Y  +FIA+A+  +++K+  LL AVF +F +IV  SL + D P R
Sbjct: 84  VLVATVNSIGAVFQLAYTAVFIAFADAKQRLKVSALLAAVFVVFGLIVFVSLALLDHPTR 143

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           +  VG LS ASL+ MFASPL IINLVIRTKSVE+MPFYLSLS FLMS SFF YG+   D 
Sbjct: 144 QMFVGYLSVASLIFMFASPLSIINLVIRTKSVEYMPFYLSLSMFLMSASFFGYGVLLNDF 203

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG +LGI+QLVLY Y+ + + EE++ PL++++
Sbjct: 204 FIYIPNGIGTILGIIQLVLYAYFRKGSSEEAKLPLLVTH 242

[Close]

BLAST of Cla023305 vs. Swiss-Prot
Match: SWT2A_ORYSJ (Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET2A PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 92/159 (57.86%), Postives = 120/159 (75.47%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++V TVNSIGA+FQL Y   FIA+A+   ++K+  LL+ VFG+F +IV  SL + D   R
Sbjct: 85  VLVATVNSIGALFQLAYTATFIAFADAKNRVKVSSLLVMVFGVFALIVYVSLALFDHQTR 144

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           +  VG LS ASL+ MFASPL IINLVIRTKSVE+MPFYLSLS FLMS+SFF YG+  +D 
Sbjct: 145 QLFVGYLSVASLIFMFASPLSIINLVIRTKSVEYMPFYLSLSMFLMSVSFFAYGVLLHDF 204

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG VLG++QLVLY Y+ + ++E+S  PL++++
Sbjct: 205 FIYIPNGIGTVLGVIQLVLYGYFRKGSREDSL-PLLVTH 242

[Close]

BLAST of Cla023305 vs. Swiss-Prot
Match: SWT2A_ORYSI (Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica GN=SWEET2A PE=3 SV=2)

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-44
Identity = 92/159 (57.86%), Postives = 120/159 (75.47%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++V TVNSIGA+FQL Y   FIA+A+   ++K+  LL+ VFG+F +IV  SL + D   R
Sbjct: 85  VLVATVNSIGALFQLAYTATFIAFADAKNRVKVSSLLVMVFGVFALIVYVSLALFDHQTR 144

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           +  VG LS ASL+ MFASPL IINLVIRTKSVE+MPFYLSLS FLMS+SFF YG+  +D 
Sbjct: 145 QLFVGYLSVASLIFMFASPLSIINLVIRTKSVEYMPFYLSLSMFLMSVSFFAYGVLLHDF 204

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG VLG++QLVLY Y+ + ++E+S  PL++++
Sbjct: 205 FIYIPNGIGTVLGVIQLVLYGYFRKGSREDSL-PLLVTH 242

[Close]

BLAST of Cla023305 vs. Swiss-Prot
Match: SWT2B_ORYSJ (Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. japonica GN=SWEET2B PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40
Identity = 89/160 (55.62%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGK-KIKMLGLLLAVFGLFIVIVVGSLQITDLPL 60
           ++V TVN IGAVFQL YI LFI YA+  K ++K++GLL+ V   F ++   S+   D PL
Sbjct: 71  LLVATVNGIGAVFQLAYICLFIFYADSRKTRMKIIGLLVLVVCGFALVSHASVFFFDQPL 130

Query: 61  RRNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYD 120
           R+  VG +S ASL+SMFASPL ++ +VIR++SVEFMPFYLSLSTFLMS SF LYGL   D
Sbjct: 131 RQQFVGAVSMASLISMFASPLAVMGVVIRSESVEFMPFYLSLSTFLMSASFALYGLLLRD 190

Query: 121 LFVYAPNGIGAVLGIVQLVLYCYYSRVAK-EESREPLIIS 159
            F+Y PNG+G +LG +QL LY YYSR  + ++S  PL+++
Sbjct: 191 FFIYFPNGLGLILGAMQLALYAYYSRKWRGQDSSAPLLLA 230

[Close]

BLAST of Cla023305 vs. TrEMBL
Match: A0A0A0L000_CUCSA (Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_4G622870 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.5e-74
Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1


Query: 2   MVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRR 61
           MV+TVNSIGAVFQLVYIMLFI YAEKGKKIKMLGLLL +FGLFIVIV+GSLQI DL LRR
Sbjct: 75  MVMTVNSIGAVFQLVYIMLFITYAEKGKKIKMLGLLLGIFGLFIVIVIGSLQIADLSLRR 134

Query: 62  NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF 121
           NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF
Sbjct: 135 NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF 194

Query: 122 VYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISYA 161
           VYAPNGIG +LG VQLVLYCY+SRVA+EESREPLI+SYA
Sbjct: 195 VYAPNGIGTLLGSVQLVLYCYFSRVAREESREPLIVSYA 233

[Close]

BLAST of Cla023305 vs. TrEMBL
Match: M5WK62_PRUPE (Bidirectional sugar transporter SWEET (Fragment) OS=Prunus persica GN=PRUPE_ppa021855mg PE=3 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.2e-62
Identity = 119/159 (74.84%), Postives = 139/159 (87.42%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++++TVNS GAVFQLVYI LFI YAEK KK++MLG LLA FGLF +IV GSLQ+TDL +R
Sbjct: 82  LLIMTVNSAGAVFQLVYIALFIIYAEKSKKVRMLGFLLADFGLFAIIVFGSLQMTDLVMR 141

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R +VG+LSC SL+SMFASP+FIINLVIRTKSVEFMPFYLSLSTFLMS SFFLYG+FNYDL
Sbjct: 142 RLIVGLLSCVSLISMFASPMFIINLVIRTKSVEFMPFYLSLSTFLMSTSFFLYGIFNYDL 201

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG +LGI+QL LY YY   +KE+SREPLI+ Y
Sbjct: 202 FIYVPNGIGTILGIIQLALYFYYKDSSKEDSREPLIVPY 240

[Close]

BLAST of Cla023305 vs. TrEMBL
Match: A0A0R0G499_SOYBN (Bidirectional sugar transporter SWEET OS=Glycine max GN=GLYMA_15G211800 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.5e-59
Identity = 115/159 (72.33%), Postives = 135/159 (84.91%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++V TVNSIGA FQLVYI+LF+ YAEK +K++M+GLLLAV G+F++I+VGSLQI D  +R
Sbjct: 80  LLVTTVNSIGAAFQLVYIILFLMYAEKARKVRMVGLLLAVLGIFVIILVGSLQIDDSAMR 139

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R  VG LSCASL+SMFASPLFII LVIRTKS+EFMPFYLSLSTFLMS SFFLYGL + D 
Sbjct: 140 RMFVGFLSCASLISMFASPLFIIKLVIRTKSIEFMPFYLSLSTFLMSFSFFLYGLLSDDA 199

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG VLGI+QLVLY YY   + EE REPLI+SY
Sbjct: 200 FIYVPNGIGTVLGIIQLVLYFYYKGSSSEECREPLIVSY 238

[Close]

BLAST of Cla023305 vs. TrEMBL
Match: I1MI63_SOYBN (Bidirectional sugar transporter SWEET OS=Glycine max GN=GLYMA_15G211800 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.5e-59
Identity = 115/159 (72.33%), Postives = 135/159 (84.91%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++V TVNSIGA FQLVYI+LF+ YAEK +K++M+GLLLAV G+F++I+VGSLQI D  +R
Sbjct: 76  LLVTTVNSIGAAFQLVYIILFLMYAEKARKVRMVGLLLAVLGIFVIILVGSLQIDDSAMR 135

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R  VG LSCASL+SMFASPLFII LVIRTKS+EFMPFYLSLSTFLMS SFFLYGL + D 
Sbjct: 136 RMFVGFLSCASLISMFASPLFIIKLVIRTKSIEFMPFYLSLSTFLMSFSFFLYGLLSDDA 195

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG VLGI+QLVLY YY   + EE REPLI+SY
Sbjct: 196 FIYVPNGIGTVLGIIQLVLYFYYKGSSSEECREPLIVSY 234

[Close]

BLAST of Cla023305 vs. TrEMBL
Match: A0A0B2R0R4_GLYSO (Bidirectional sugar transporter SWEET OS=Glycine soja GN=glysoja_042871 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.5e-59
Identity = 115/159 (72.33%), Postives = 135/159 (84.91%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++V TVNSIGA FQLVYI+LF+ YAEK +K++M+GLLLAV G+F++I+VGSLQI D  +R
Sbjct: 76  LLVTTVNSIGAAFQLVYIILFLMYAEKARKVRMVGLLLAVLGIFVIILVGSLQIDDSAMR 135

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R  VG LSCASL+SMFASPLFII LVIRTKS+EFMPFYLSLSTFLMS SFFLYGL + D 
Sbjct: 136 RMFVGFLSCASLISMFASPLFIIKLVIRTKSIEFMPFYLSLSTFLMSFSFFLYGLLSDDA 195

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG VLGI+QLVLY YY   + EE REPLI+SY
Sbjct: 196 FIYVPNGIGTVLGIIQLVLYFYYKGSSSEECREPLIVSY 234

[Close]

BLAST of Cla023305 vs. NCBI nr
Match: gi|778695626|ref|XP_004146078.2| (PREDICTED: bidirectional sugar transporter SWEET2 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 2.1e-74
Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1


Query: 2   MVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLRR 61
           MV+TVNSIGAVFQLVYIMLFI YAEKGKKIKMLGLLL +FGLFIVIV+GSLQI DL LRR
Sbjct: 75  MVMTVNSIGAVFQLVYIMLFITYAEKGKKIKMLGLLLGIFGLFIVIVIGSLQIADLSLRR 134

Query: 62  NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF 121
           NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF
Sbjct: 135 NVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDLF 194

Query: 122 VYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISYA 161
           VYAPNGIG +LG VQLVLYCY+SRVA+EESREPLI+SYA
Sbjct: 195 VYAPNGIGTLLGSVQLVLYCYFSRVAREESREPLIVSYA 233

[Close]

BLAST of Cla023305 vs. NCBI nr
Match: gi|595884042|ref|XP_007212900.1| (hypothetical protein PRUPE_ppa021855mg, partial [Prunus persica])

HSP 1 Score: 246.5 bits (628), Expect = 3.1e-62
Identity = 119/159 (74.84%), Postives = 139/159 (87.42%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++++TVNS GAVFQLVYI LFI YAEK KK++MLG LLA FGLF +IV GSLQ+TDL +R
Sbjct: 82  LLIMTVNSAGAVFQLVYIALFIIYAEKSKKVRMLGFLLADFGLFAIIVFGSLQMTDLVMR 141

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R +VG+LSC SL+SMFASP+FIINLVIRTKSVEFMPFYLSLSTFLMS SFFLYG+FNYDL
Sbjct: 142 RLIVGLLSCVSLISMFASPMFIINLVIRTKSVEFMPFYLSLSTFLMSTSFFLYGIFNYDL 201

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG +LGI+QL LY YY   +KE+SREPLI+ Y
Sbjct: 202 FIYVPNGIGTILGIIQLALYFYYKDSSKEDSREPLIVPY 240

[Close]

BLAST of Cla023305 vs. NCBI nr
Match: gi|645239895|ref|XP_008226346.1| (PREDICTED: bidirectional sugar transporter SWEET2 [Prunus mume])

HSP 1 Score: 243.8 bits (621), Expect = 2.0e-61
Identity = 119/159 (74.84%), Postives = 138/159 (86.79%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++++TVNS GAVFQLVYI LFI YAEK KK++MLG LLA FGLF +IV GSLQ+TDL +R
Sbjct: 76  LLIMTVNSAGAVFQLVYIALFIIYAEKSKKVRMLGFLLADFGLFAIIVFGSLQMTDLVMR 135

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           + +VG+LSC SL+SMFASP+FIINLVIRTKSVEFMPFYLSLSTFLMS SFFLYG+FNYDL
Sbjct: 136 QLIVGLLSCVSLISMFASPMFIINLVIRTKSVEFMPFYLSLSTFLMSTSFFLYGIFNYDL 195

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISY 160
           F+Y PNGIG +LGIVQL LY YY   +KE+SREPLI  Y
Sbjct: 196 FIYVPNGIGTILGIVQLALYFYYKDSSKEDSREPLIAPY 234

[Close]

BLAST of Cla023305 vs. NCBI nr
Match: gi|470115985|ref|XP_004294170.1| (PREDICTED: bidirectional sugar transporter SWEET2 [Fragaria vesca subsp. vesca])

HSP 1 Score: 243.4 bits (620), Expect = 2.6e-61
Identity = 119/160 (74.38%), Postives = 141/160 (88.12%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           ++++TVNS+GAVFQL YI LFI YAEK KK+ M+GLL+AVFGLF +I +GSLQI+DL LR
Sbjct: 76  ILILTVNSVGAVFQLAYITLFIIYAEKPKKVWMMGLLVAVFGLFAIIAIGSLQISDLFLR 135

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R +VG+LSC SL+SMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMS SF LYG+FN+D 
Sbjct: 136 RTIVGLLSCFSLISMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSTSFLLYGIFNFDP 195

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISYA 161
           +VY PNGIG +LGIVQL LY +Y R +KE+SREPLI+SYA
Sbjct: 196 YVYVPNGIGTILGIVQLALYFHYHRSSKEDSREPLIVSYA 235

[Close]

BLAST of Cla023305 vs. NCBI nr
Match: gi|1009162123|ref|XP_015899266.1| (PREDICTED: bidirectional sugar transporter SWEET2-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 240.7 bits (613), Expect = 1.7e-60
Identity = 121/160 (75.62%), Postives = 140/160 (87.50%), Query Frame = 1


Query: 1   MMVVTVNSIGAVFQLVYIMLFIAYAEKGKKIKMLGLLLAVFGLFIVIVVGSLQITDLPLR 60
           +MV+TVNS GAVFQLVYI+LFI+YAEK +K++ML LLLAVFGLF +IV GSLQI D  +R
Sbjct: 76  LMVLTVNSAGAVFQLVYIILFISYAEKSQKVRMLVLLLAVFGLFAIIVGGSLQIIDFSMR 135

Query: 61  RNVVGILSCASLVSMFASPLFIINLVIRTKSVEFMPFYLSLSTFLMSISFFLYGLFNYDL 120
           R VVG+LSCASL+SMFASPLFIINLVIRT+SVEFMPFYLSLSTFLMS SF LYGLFN D 
Sbjct: 136 RMVVGLLSCASLISMFASPLFIINLVIRTRSVEFMPFYLSLSTFLMSTSFLLYGLFNSDP 195

Query: 121 FVYAPNGIGAVLGIVQLVLYCYYSRVAKEESREPLIISYA 161
           F++ PNGIG VLGIVQL LY YY   ++E+SREPL++SYA
Sbjct: 196 FIFVPNGIGTVLGIVQLALYFYYHNSSQEDSREPLLVSYA 235

The following BLAST results are available for this feature:

BLAST of Cla023305 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SWET2_ARATH	7.4e-56	71.07	Bidirectional sugar transporter SWEET2 OS=Arabidopsis thaliana GN=SWEET2 PE=1 SV...	[more]
SWT2A_SORBI	1.6e-45	59.12	Bidirectional sugar transporter SWEET2a OS=Sorghum bicolor GN=SWEET2A PE=3 SV=1	[more]
SWT2A_ORYSJ	1.7e-44	57.86	Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. japonica GN=SWEET...	[more]
SWT2A_ORYSI	1.7e-44	57.86	Bidirectional sugar transporter SWEET2a OS=Oryza sativa subsp. indica GN=SWEET2A...	[more]
SWT2B_ORYSJ	1.2e-40	55.63	Bidirectional sugar transporter SWEET2b OS=Oryza sativa subsp. japonica GN=SWEET...	[more]

BLAST of Cla023305 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L000_CUCSA	1.5e-74	91.82	Bidirectional sugar transporter SWEET OS=Cucumis sativus GN=Csa_4G622870 PE=3 SV...	[more]
M5WK62_PRUPE	2.2e-62	74.84	Bidirectional sugar transporter SWEET (Fragment) OS=Prunus persica GN=PRUPE_ppa0...	[more]
A0A0R0G499_SOYBN	6.5e-59	72.33	Bidirectional sugar transporter SWEET OS=Glycine max GN=GLYMA_15G211800 PE=3 SV=...	[more]
I1MI63_SOYBN	6.5e-59	72.33	Bidirectional sugar transporter SWEET OS=Glycine max GN=GLYMA_15G211800 PE=3 SV=...	[more]
A0A0B2R0R4_GLYSO	6.5e-59	72.33	Bidirectional sugar transporter SWEET OS=Glycine soja GN=glysoja_042871 PE=3 SV=...	[more]

BLAST of Cla023305 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695626\|ref\|XP_004146078.2\|	2.1e-74	91.82	PREDICTED: bidirectional sugar transporter SWEET2 [Cucumis sativus]	[more]
gi\|595884042\|ref\|XP_007212900.1\|	3.1e-62	74.84	hypothetical protein PRUPE_ppa021855mg, partial [Prunus persica]	[more]
gi\|645239895\|ref\|XP_008226346.1\|	2.0e-61	74.84	PREDICTED: bidirectional sugar transporter SWEET2 [Prunus mume]	[more]
gi\|470115985\|ref\|XP_004294170.1\|	2.6e-61	74.38	PREDICTED: bidirectional sugar transporter SWEET2 [Fragaria vesca subsp. vesca]	[more]
gi\|1009162123\|ref\|XP_015899266.1\|	1.7e-60	75.63	PREDICTED: bidirectional sugar transporter SWEET2-like isoform X1 [Ziziphus juju...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004316	SWEET_sugar_transpr

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034219	carbohydrate transmembrane transport
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005887	integral component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051119	sugar transmembrane transporter activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU78520	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla023305	Cla023305.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU78520	WMU78520	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004316	SWEET sugar transporter	PFAM	PF03083	MtN3_slv	coord: 63..145 score: 4.1
None	No IPR available	PANTHER	PTHR10791	RAG1-ACTIVATING PROTEIN 1	coord: 1..157 score: 2.7
None	No IPR available	PANTHER	PTHR10791:SF57	SUBFAMILY NOT NAMED	coord: 1..157 score: 2.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla023305	Cla97C11G223200	Watermelon (97103) v2	wmwmbB358
Cla023305	Csa4G622870	Cucumber (Chinese Long) v2	cuwmB349
Cla023305	ClCG11G017150	Watermelon (Charleston Gray)	wcgwmB103
Cla023305	CSPI04G22490	Wild cucumber (PI 183967)	cpiwmB356
Cla023305	Cucsa.057980	Cucumber (Gy14) v1	cgywmB047
Cla023305	CmaCh09G006790	Cucurbita maxima (Rimu)	cmawmB038
Cla023305	CmaCh01G012710	Cucurbita maxima (Rimu)	cmawmB463
Cla023305	CmoCh09G006590	Cucurbita moschata (Rifu)	cmowmB030
Cla023305	CmoCh01G013260	Cucurbita moschata (Rifu)	cmowmB457
Cla023305	Lsi04G019770	Bottle gourd (USVL1VR-Ls)	lsiwmB333
Cla023305	Cp4.1LG02g02230	Cucurbita pepo (Zucchini)	cpewmB581
Cla023305	Cp4.1LG06g05200	Cucurbita pepo (Zucchini)	cpewmB776
Cla023305	CsGy4G021000	Cucumber (Gy14) v2	cgybwmB326
Cla023305	Carg03081	Silver-seed gourd	carwmB0635
Cla023305	Carg14752	Silver-seed gourd	carwmB0304
Cla023305	CsaV3_4G032810	Cucumber (Chinese Long) v3	cucwmB367
Cla023305	Bhi09G002911	Wax gourd	wgowmB641

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla023305	Melon (DHL92) v3.5.1	mewmB539
Cla023305	Melon (DHL92) v3.6.1	medwmB524