Cla022974 (gene) Watermelon (97103) v1

Overview
NameCla022974
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionCaffeoyl-CoA O-methyltransferase (AHRD V1 *-** F4IAT5_ARATH); contains Interpro domain(s) IPR002935 O-methyltransferase, family 3
LocationChr11 : 16053929 .. 16055043 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTCAGAGTTAGTAGAGTGGCTGTTGTCGGAGTTAGTGGAGTGGCTGTCATTGGAGGTTGCTGGAGTTGTGGTTGGATGTTGTTGGAGTTCGATGCAACTAGTGGTTGTTGGAGTTGGCTGTCAGAGGTGGGTATGAGAGGTGGTTGTCGAAGGGGTGGCTGTTGGAGGGGGTCGCCAAAGTTGGGTGTCGAAGTTGGTCGTCTCGCTTGTGATGAGGTTTGTGTGGACTATTGGTGGACATGATATAAAATGTTGGTGACATGTAAAATTGAATTTCCAAACAACGAGTCCATTTTATATCTCTACTCATCTCATCTCATTTTATCACCCCAAACACCCCCTTAATTTTCTAAGAAGTAAGAAGCGGGTCTTTTTCATGTGGGTCCATGAAAATCGGTGATAAGAAATCCCAAAAACGCTCACACTTATTGCAAGCATCAGAGCTCGTTATTCTGTTCATTACAGTGAAGGTCATGGCGAACCATCAGCACGAGAAGAACATCCTCCGCTCTTCTCCAGGTTCGTTCATAATATTCCATTCTTAACCTTGTTCTTAGCATCACTCCAATTCCAAATACTAATTATTTCAGCGCTGCGTCTTACCTTGCCTCAATTCCTCACAATTTTGCTAGAGAATAGAATTAATCAACTCAGTGCTTGAAATTAGTCAGACACTAATCGAAAAAATGGTTGCTATTTAAGTGCAGTATATATTGGAAGCCAATTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAGCCACCTTCGAGAAGTTTGACAAACACCTGTTAGTTTCCCACTCTTCTTCAGCATTTAGAGTTCTTCGATTTCAAATTTGATTCGATTGTAATCGATTCAGTCAATTTCATAGGTGAGTGGTCGATAATTTAGAATGAATTTAATTCGGATGGATTTAGACAGAATGAATTTGGGGATTGAATTGCAGGAGTGTGATGAATGTACCGGCGGACGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACCGGCTATTCCCTCCTCACTACGGCGCTTGCACTGCCTGCCGATGGCCAGGTTAGCTAA

mRNA sequence

ATGGTCGTCAGAGTTAGTAGAGTGGCTGTTGTCGGAGTTAGTGGAGTGGCTGTCATTGGAGGTTGCTGGAGTTGTGGTTGGATGTTGTTGGAGTTCGATGCAACTAGTGGTTGTTGGAGTTGGCTGTCAGAGGTGGGTATGAGAGGTGGTTGTCGAAGGGGTGGCTGTTGGAGGGGGTCGCCAAAGTTGGGTGTCGAAGTTGGTCGTCTCGCTTGTGATGAGTATATATTGGAAGCCAATTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAGCCACCTTCGAGAAGTTTGACAAACACCTGAGTGTGATGAATGTACCGGCGGACGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACCGGCTATTCCCTCCTCACTACGGCGCTTGCACTGCCTGCCGATGGCCAGGTTAGCTAA

Coding sequence (CDS)

ATGGTCGTCAGAGTTAGTAGAGTGGCTGTTGTCGGAGTTAGTGGAGTGGCTGTCATTGGAGGTTGCTGGAGTTGTGGTTGGATGTTGTTGGAGTTCGATGCAACTAGTGGTTGTTGGAGTTGGCTGTCAGAGGTGGGTATGAGAGGTGGTTGTCGAAGGGGTGGCTGTTGGAGGGGGTCGCCAAAGTTGGGTGTCGAAGTTGGTCGTCTCGCTTGTGATGAGTATATATTGGAAGCCAATTCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGAGAAGCCACCTTCGAGAAGTTTGACAAACACCTGAGTGTGATGAATGTACCGGCGGACGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACCGGCTATTCCCTCCTCACTACGGCGCTTGCACTGCCTGCCGATGGCCAGGTTAGCTAA

Protein sequence

MVVRVSRVAVVGVSGVAVIGGCWSCGWMLLEFDATSGCWSWLSEVGMRGGCRRGGCWRGSPKLGVEVGRLACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQVS
Homology
[Close]
BLAST of Cla022974 vs. Swiss-Prot
Match: FAOMT_VITVI (Flavonoid 3',5'-methyltransferase OS=Vitis vinifera GN=FAOMT PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-27
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +Y+LE ++YPREHEQLK LREAT EK  K+ S+MNVP DEGLF+SMLLK+MNAKKTI
Sbjct: 14  ALTKYLLETSAYPREHEQLKGLREATVEKH-KYWSLMNVPVDEGLFISMLLKIMNAKKTI 73

Query: 131 EIGVFTGYSLLTTALALPADGQV 154
           E+GVFTGYSLL TALALP DG++
Sbjct: 74  ELGVFTGYSLLATALALPQDGKI 95

[Close]
BLAST of Cla022974 vs. Swiss-Prot
Match: CAMT_POPKI (Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-25
Identity = 60/84 (71.43%), Postives = 69/84 (82.14%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YI E ++YP EHEQLKELREAT +K+   LS M+VP DEG FLSMLLKLMNAK+T+
Sbjct: 15  ALKQYIYETSAYPGEHEQLKELREATTKKYGS-LSGMSVPVDEGRFLSMLLKLMNAKRTL 74

Query: 131 EIGVFTGYSLLTTALALPADGQVS 155
           E+GVFTGYSLL+TALALP DGQV+
Sbjct: 75  EVGVFTGYSLLSTALALPEDGQVT 97

[Close]
BLAST of Cla022974 vs. Swiss-Prot
Match: CAMT1_ARATH (Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=At1g67980 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.8e-25
Identity = 58/84 (69.05%), Postives = 69/84 (82.14%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YI+E ++YPREHE LKELR+AT +K+  +LS M VP DEG FLSML+K+MNAK TI
Sbjct: 15  ALKQYIMETSAYPREHELLKELRKATVQKYG-NLSEMEVPVDEGHFLSMLVKIMNAKNTI 74

Query: 131 EIGVFTGYSLLTTALALPADGQVS 155
           EIGVFTGYSLLTTALALP DG+++
Sbjct: 75  EIGVFTGYSLLTTALALPEDGRIT 97

[Close]
BLAST of Cla022974 vs. Swiss-Prot
Match: TSM1_ARATH (Tapetum-specific methyltransferase 1 OS=Arabidopsis thaliana GN=TSM1 PE=1 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 7.2e-24
Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YI+E  +YPREHE LKELREAT +++  +LS M VP DE LFLSML+K++NAK TI
Sbjct: 15  ALKQYIMETTAYPREHELLKELREATIQRYG-NLSEMGVPVDESLFLSMLVKIINAKNTI 74

Query: 131 EIGVFTGYSLLTTALALPADGQVS 155
           EIGVFTGYSL T ALALP DG+++
Sbjct: 75  EIGVFTGYSLFTVALALPEDGRIT 97

[Close]
BLAST of Cla022974 vs. Swiss-Prot
Match: CAMT_MEDSA (Caffeoyl-CoA O-methyltransferase OS=Medicago sativa GN=CCOMT PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.3e-20
Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKH-LSVMNVPADEGLFLSMLLKLMNAKKTIEI 133
           +YILE + +PREHE +KELRE T     KH  ++M   ADEG FLSMLLKL+NAK T+EI
Sbjct: 31  QYILETSVFPREHEAMKELREVTA----KHPWNIMTTSADEGQFLSMLLKLINAKNTMEI 90

Query: 134 GVFTGYSLLTTALALPADGQV 154
           GV+TGYSLL TALA+P DG++
Sbjct: 91  GVYTGYSLLATALAIPEDGKI 107

[Close]
BLAST of Cla022974 vs. TrEMBL
Match: A0A0A0KTC8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589940 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 68/81 (83.95%), Postives = 77/81 (95.06%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIG 133
           +YIL+AN+YPREHEQLKELRE+TF KFDK  SVMNVP DEGLFLSMLLKLMNAKKTIE+G
Sbjct: 18  QYILKANAYPREHEQLKELRESTFNKFDKSGSVMNVPVDEGLFLSMLLKLMNAKKTIEVG 77

Query: 134 VFTGYSLLTTALALPADGQVS 155
           V+TGYSLLTTALALPADG+++
Sbjct: 78  VYTGYSLLTTALALPADGRIT 98

[Close]
BLAST of Cla022974 vs. TrEMBL
Match: A0A061E5G5_THECC (Caffeoyl-CoA 3-O-methyltransferase OS=Theobroma cacao GN=TCM_008857 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.9e-26
Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIG 133
           EYILE N+YP+EHEQLKELREAT EK+ K  S+MNVPADE  FLSMLLK+MNAKKT+EIG
Sbjct: 19  EYILEKNAYPKEHEQLKELREATAEKYGKK-SIMNVPADEAQFLSMLLKVMNAKKTLEIG 78

Query: 134 VFTGYSLLTTALALPADGQVS 155
           VFTGYSLL TALALP DGQ++
Sbjct: 79  VFTGYSLLATALALPDDGQIT 98

[Close]
BLAST of Cla022974 vs. TrEMBL
Match: A0A059B8J3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04646 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-26
Identity = 63/83 (75.90%), Postives = 72/83 (86.75%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YILE N+YPREHEQLKELREAT +K+    S+MNVP DEG  +SM+LKLMNAKKTI
Sbjct: 15  ALSKYILETNAYPREHEQLKELREATVQKYQIR-SIMNVPVDEGQLISMMLKLMNAKKTI 74

Query: 131 EIGVFTGYSLLTTALALPADGQV 154
           EIGVFTGYSLLTTALALPADG++
Sbjct: 75  EIGVFTGYSLLTTALALPADGKI 96

[Close]
BLAST of Cla022974 vs. TrEMBL
Match: A0A059B7W9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04646 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 3.2e-26
Identity = 63/83 (75.90%), Postives = 72/83 (86.75%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YILE N+YPREHEQLKELREAT +K+    S+MNVP DEG  +SM+LKLMNAKKTI
Sbjct: 15  ALSKYILETNAYPREHEQLKELREATVQKYQIR-SIMNVPVDEGQLISMMLKLMNAKKTI 74

Query: 131 EIGVFTGYSLLTTALALPADGQV 154
           EIGVFTGYSLLTTALALPADG++
Sbjct: 75  EIGVFTGYSLLTTALALPADGKI 96

[Close]
BLAST of Cla022974 vs. TrEMBL
Match: A0A059B7X2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04650 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 5.4e-26
Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YILE N+YPREHEQLKELREAT +K+   + +MNVPADEG  +SM+LKLMNA KTI
Sbjct: 15  ALSKYILETNAYPREHEQLKELREATVQKYQ--IRIMNVPADEGQLISMMLKLMNANKTI 74

Query: 131 EIGVFTGYSLLTTALALPADGQV 154
           EIGVFTGYSLLTTALALPADG++
Sbjct: 75  EIGVFTGYSLLTTALALPADGKI 95

[Close]
BLAST of Cla022974 vs. NCBI nr
Match: gi|449435067|ref|XP_004135317.1| (PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Cucumis sativus])

HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30
Identity = 68/81 (83.95%), Postives = 77/81 (95.06%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIG 133
           +YIL+AN+YPREHEQLKELRE+TF KFDK  SVMNVP DEGLFLSMLLKLMNAKKTIE+G
Sbjct: 18  QYILKANAYPREHEQLKELRESTFNKFDKSGSVMNVPVDEGLFLSMLLKLMNAKKTIEVG 77

Query: 134 VFTGYSLLTTALALPADGQVS 155
           V+TGYSLLTTALALPADG+++
Sbjct: 78  VYTGYSLLTTALALPADGRIT 98

[Close]
BLAST of Cla022974 vs. NCBI nr
Match: gi|659090498|ref|XP_008446048.1| (PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Cucumis melo])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 69/81 (85.19%), Postives = 76/81 (93.83%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIG 133
           +YIL+ANSYPREHEQLKELR AT EKF+K  S+M+VP DEGLFLSMLLKLMNAKKTIEIG
Sbjct: 18  QYILKANSYPREHEQLKELRVATVEKFNKPKSMMSVPVDEGLFLSMLLKLMNAKKTIEIG 77

Query: 134 VFTGYSLLTTALALPADGQVS 155
           VFTGYSLLTTALALPADGQ++
Sbjct: 78  VFTGYSLLTTALALPADGQIT 98

[Close]
BLAST of Cla022974 vs. NCBI nr
Match: gi|590692401|ref|XP_007044046.1| (Caffeoyl-CoA 3-O-methyltransferase [Theobroma cacao])

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-26
Identity = 64/81 (79.01%), Postives = 72/81 (88.89%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIG 133
           EYILE N+YP+EHEQLKELREAT EK+ K  S+MNVPADE  FLSMLLK+MNAKKT+EIG
Sbjct: 19  EYILEKNAYPKEHEQLKELREATAEKYGKK-SIMNVPADEAQFLSMLLKVMNAKKTLEIG 78

Query: 134 VFTGYSLLTTALALPADGQVS 155
           VFTGYSLL TALALP DGQ++
Sbjct: 79  VFTGYSLLATALALPDDGQIT 98

[Close]
BLAST of Cla022974 vs. NCBI nr
Match: gi|470149374|ref|XP_004310213.1| (PREDICTED: flavonoid 3',5'-methyltransferase-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 127.1 bits (318), Expect = 2.7e-26
Identity = 61/80 (76.25%), Postives = 74/80 (92.50%), Query Frame = 1 

Query: 74  EYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTIEIG 133
           +YILE + YPREHEQLK+LREAT +K+++ LS+MNVP DEGL +SMLLK+MNAKKT+EIG
Sbjct: 28  KYILETSCYPREHEQLKQLREATIKKYER-LSIMNVPVDEGLLISMLLKIMNAKKTLEIG 87

Query: 134 VFTGYSLLTTALALPADGQV 154
           VFTGYSLLTTALALPADG++
Sbjct: 88  VFTGYSLLTTALALPADGKI 106

[Close]
BLAST of Cla022974 vs. NCBI nr
Match: gi|702457519|ref|XP_010027275.1| (PREDICTED: flavonoid 3',5'-methyltransferase-like [Eucalyptus grandis])

HSP 1 Score: 126.7 bits (317), Expect = 3.5e-26
Identity = 62/83 (74.70%), Postives = 74/83 (89.16%), Query Frame = 1 

Query: 71  ACDEYILEANSYPREHEQLKELREATFEKFDKHLSVMNVPADEGLFLSMLLKLMNAKKTI 130
           A  +YILE N+YPREHEQLKELREAT +K+ ++ S+MNVPADEG  +SM+LKLMNAKKTI
Sbjct: 14  ALSKYILETNAYPREHEQLKELREATVQKY-QYWSLMNVPADEGQLISMMLKLMNAKKTI 73

Query: 131 EIGVFTGYSLLTTALALPADGQV 154
           E+GVFTGYSLLTTALALP DG++
Sbjct: 74  EVGVFTGYSLLTTALALPTDGKI 95

The following BLAST results are available for this feature:
BLAST of Cla022974 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FAOMT_VITVI4.1e-2773.49Flavonoid 3',5'-methyltransferase OS=Vitis vinifera GN=FAOMT PE=1 SV=1[more]
CAMT_POPKI1.3e-2571.43Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1[more]
CAMT1_ARATH3.8e-2569.05Putative caffeoyl-CoA O-methyltransferase At1g67980 OS=Arabidopsis thaliana GN=A... [more]
TSM1_ARATH7.2e-2465.48Tapetum-specific methyltransferase 1 OS=Arabidopsis thaliana GN=TSM1 PE=1 SV=2[more]
CAMT_MEDSA6.3e-2062.96Caffeoyl-CoA O-methyltransferase OS=Medicago sativa GN=CCOMT PE=1 SV=1[more]
BLAST of Cla022974 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTC8_CUCSA1.2e-3083.95Uncharacterized protein OS=Cucumis sativus GN=Csa_5G589940 PE=4 SV=1[more]
A0A061E5G5_THECC1.9e-2679.01Caffeoyl-CoA 3-O-methyltransferase OS=Theobroma cacao GN=TCM_008857 PE=4 SV=1[more]
A0A059B8J3_EUCGR3.2e-2675.90Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04646 PE=4 SV=1[more]
A0A059B7W9_EUCGR3.2e-2675.90Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04646 PE=4 SV=1[more]
A0A059B7X2_EUCGR5.4e-2674.70Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H04650 PE=4 SV=1[more]
BLAST of Cla022974 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435067|ref|XP_004135317.1|1.8e-3083.95PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Cucumis sativus][more]
gi|659090498|ref|XP_008446048.1|1.2e-2985.19PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Cucumis melo][more]
gi|590692401|ref|XP_007044046.1|2.7e-2679.01Caffeoyl-CoA 3-O-methyltransferase [Theobroma cacao][more]
gi|470149374|ref|XP_004310213.1|2.7e-2676.25PREDICTED: flavonoid 3',5'-methyltransferase-like [Fragaria vesca subsp. vesca][more]
gi|702457519|ref|XP_010027275.1|3.5e-2674.70PREDICTED: flavonoid 3',5'-methyltransferase-like [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002935O-MeTrfase_3
Vocabulary: Molecular Function
TermDefinition
GO:0008171O-methyltransferase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0008171 O-methyltransferase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU16947watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU17211watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU32200watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU43157watermelon EST collection version 2.0transcribed_cluster
WMU44679watermelon EST collection version 2.0transcribed_cluster
WMU47121watermelon EST collection version 2.0transcribed_cluster
WMU65044watermelon EST collection version 2.0transcribed_cluster
WMU71664watermelon EST collection version 2.0transcribed_cluster
WMU75839watermelon EST collection version 2.0transcribed_cluster
WMU76462watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022974Cla022974.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU16947WMU16947transcribed_cluster
WMU75839WMU75839transcribed_cluster
WMU32200WMU32200transcribed_cluster
WMU43157WMU43157transcribed_cluster
WMU17211WMU17211transcribed_cluster
WMU44679WMU44679transcribed_cluster
WMU47121WMU47121transcribed_cluster
WMU76462WMU76462transcribed_cluster
WMU65044WMU65044transcribed_cluster
WMU71664WMU71664transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002935O-methyltransferase, family 3PFAMPF01596Methyltransf_3coord: 78..153
score: 5.2
IPR002935O-methyltransferase, family 3PROFILEPS51682SAM_OMT_Icoord: 65..154
score: 22
NoneNo IPR availablePANTHERPTHR10509O-METHYLTRANSFERASE-RELATEDcoord: 74..153
score: 4.7
NoneNo IPR availablePANTHERPTHR10509:SF20S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN-RELATEDcoord: 74..153
score: 4.7
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..22
score: