Cla022904 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022904
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (AHRD V1 ***- E8V412_TERSS); contains Interpro domain(s) IPR013785 Aldolase-type TIM barrel
Location	Chr11 : 15440885 .. 15444029 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGTTTCTAGGAGCATCAGCATGTGGTCTTTGCCTGCTATAGGGTGTTCGAACCCTTTTGCATTTGCTCGCTTTAGAGGTTTTTGTGCTTCTAGTCAGCTACCTGTGTCTCCTAAAGACAAGACCCTGAGAACAATTTACAATTCTGGAGTCATTGCTTGCCTTCGGGCTAGCAGGTAACCCATTTTTTTCATGGAACACTTTCTGCATTATAGAATAAACAAAGAAAAATTCCAATGCAAGACTTTTGAATTTTGTTTTGTTTGTTTCTTTATATCTTGAGCATCAGTCTCTTTTCATTATTTCAATGAAAAATTTAGTTTCCTGGATTCTTTTGAAAGTTAAAACTCTCTGCTTCATGGCTCAAATTACTAGTTCTTGATGGCCAGCAGGTAACCCTAATGTCATTGTTACTTTCTCTGTATATTTTACTGATGAGCTGATAAATGACGTCAAGGACTGTTATCTATATAAACCATTTTCATGGCTATATTACTAAAATTGGTTAGATAGCACTAACCTTACGGTGACATACATTTTCATTGTTTTATTAGATGCTGAATCTCATAGTTTGCAAAAGTAGAATCTCTCCTCAATTTCGGAAATCATTGCAGATGTCTTTTAAGTGGTAAGAAGACATATTGGAATTGAAATGGAAATAATGTAGGTTTAGATTAGCTACTAATTGAGTCGTTTTTTATCAAAGATAGATTACAAATTGTTTTTTTTTCTTTTTTGGTTGATATCCATGAGTGCTTGGGCCAACTTACGCGTGCCTCAACTAATCTCATGGACAACTTGCGTGACCCTACAACATTTGGGTATCAAGGAAACTCGTAGGATATTAATTCCCAGATAGGAGGCCACCATGGATTGAACTCATGACCTCTTAGCCATTTATTGAGACTATGTCTCCTTTTTTACCACTAGGCCAATCCATGATATTGATTCAAAGAAAGGTATTAAAGTGAGCCAAAAATCCTGTGTCCTTCATAGACCCTGCAAACAGACCTTCATTTTTTTTCCTCTTTCTCTCTCTAAGTCTTGGTTGCTGATGTTTGTTAGTGTGAAGAAATTCAATATCATGTGTCTGGAGTTATCAAGAGCCTTGGTATGCACCTCAATTCTGTTTTAAATTCGCTGTAGTGCAGAGCTGGCAATGAGTGCTGCTTGTGCTGCGCTAAATGGTGGAATATCAGTTGTGAGTGCTCTTAATTTGAAGTTTATGTTGTTCAATTAATCTGTAAATGAAATTTGTATTTGAATTGGTGATACGAGTAATATTCATCCATAGATTCAAATATTCTTTTAATATATGATTTCTTATTGCTGTTGATTTCTAAATGATTAGCATAATTTAAAAAAGGTTGAAGAAATTTCCCTCATTACACTTTTCCAAGTGGTAAGTGCATGAATAATAATAACCATTGCAAGTGACTAGAGTATATCAATTTTATTGAACGAAATGGTTTTTTTTCCTCCCATTCCTCCTGATGAATTGATTGATGGTTTCTAACTTATTTTCCTCCTCTGTCGCCATGCAGCTGGAGATTGTTATGTCAACGCCTGGTGTGCTTGAGGTTGTTGTAGAGTATCTTCCATTTCATTGTATTTGTTATTAATTTTAAGTATTTATTACTCTTTTTTTTTTTTTTTTTTTTTTCTGTTATAAAATTTGAAACAGGTTCTACAACAGTTGCTGCAAGACTATCCTACAAGAACGTTGGGAGTAATTATTTTCTTTGCTTTTTCGTTCATGTGATGATCTCTTGATGTTTGTAATATGTTCTTGGCACACCTAGGTCAAAATTTGTGAAGCTTTTTCCCTTGAGCCTTTGATGAATTAGGATAAACTGTATCTGTACTCTAAAATGCCTACCAAAATTCAACTTTTCAACCTCACAAATGATGGATAGGTACCTGTTGAGTTCTGAAGATACCCAAATATTGTGCAGGTTGGGACAGTTCTTAATATTAAGGATGCAAAGAATGCTGTAAAAGCTGGAGCCAAGTTTCTAATGAGTCCTACTATGGTGAAGGTAAGCATTGATAGATGACCAGCACACCACATTTACTTTTGCTTATATTTCGCAGTGAACTTTAAATGTGTACGTTGAAACCTCTCGTCCTTTTTTCATGTTTTCCTTCTATCGTGATTTTTAAGTCTTGGAGTCAAACTAAAAGAGACTATAAAGATATTTTCTTCTATCAGATTATTTCAACTGATTCGCAGGGTATCATGGATGATATTGAAGGCGAGTTCTTATATATACCTGGTGTGATGACCCCAACAGAAGTAATTGGATAAGACTTTTGGCTCTTTTCTATTTCTCAAGGATTCCTCCTTTTTACATATGAAATCATTGGTTCCGCCACAAATAATTTTGGAACGTTTAAGTTACCTTTGTAACTCAGTTATATGTATATTTTGCAGGTACTGACTGCATATGAAGCTGGCGCTGAGATTGTTAAAGTAAGTAAATTTGTGGTCTCGTTTAGGGAAGTCATGGATAACCAGTTATCATTTCCCACCACCATGTCCTACTTATTTCTCTAAGATATATGGCGAGTAGACGTCGTTCACTTCACATAACAGCTTTCAAGGAACTACCACATTTCGTTGGAAGACTAGAAATTTGTATATAAAATTGAATTCTTGGAGTTCTGCATTTATCGCAAGTGAACAAGATTAAAGTTGTACTTGACTTGATTAAAAGAACGAGAGAACCAAATTTCATATATATTAGAAAAAGAATATATAAATGTCCTACAAAACATACTTTTCATTTATTTTTTGTTCCCTTCATGTTTTTCAATATAATAAATCCCATGAAAAATTCTGAGTGGGAATTAGTATGTAATTATGAATAACAATAATGATAATAAAACCCATGAAAGTAATTTATTTTGCTTTGTGTTAAGTGCTTACATTTTTTTTTCTGCTTACAATTGGTTTTGACATCAAATATGGTTCTAGCCTTGTCATTTTTTATGGATTTATGTTGGCTTTTAAACTTGAAAATAGGTTTATCCAGTTTCTGCATTAGGTGGTATTAAATATATATCAGCCCTCAAGAAGCCTTTTCCGCATATCTCAATGGTTGCTTCTCAAGGCATAACTATTGGTCAGTACTCAACTTAA

mRNA sequence

ATGTTGGTTTCTAGGAGCATCAGCATGTGGTCTTTGCCTGCTATAGGGTGTTCGAACCCTTTTGCATTTGCTCGCTTTAGAGGTTTTTGTGCTTCTAGTCAGCTACCTGTGTCTCCTAAAGACAAGACCCTGAGAACAATTTACAATTCTGGAGTCATTGCTTGCCTTCGGGCTAGCAGTGCAGAGCTGGCAATGAGTGCTGCTTGTGCTGCGCTAAATGGTGGAATATCAGTTCTGGAGATTGTTATGTCAACGCCTGGTGTGCTTGAGGTTCTACAACAGTTGCTGCAAGACTATCCTACAAGAACGTTGGGAGTTGGGACAGTTCTTAATATTAAGGATGCAAAGAATGCTGTAAAAGCTGGAGCCAAGTTTCTAATGAGTCCTACTATGGTGAAGATTATTTCAACTGATTCGCAGGGTATCATGGATGATATTGAAGGCGAGTTCTTATATATACCTGGTGTGATGACCCCAACAGAAGTACTGACTGCATATGAAGCTGGCGCTGAGATTGTTAAAGTTTATCCAGTTTCTGCATTAGGTGGTATTAAATATATATCAGCCCTCAAGAAGCCTTTTCCGCATATCTCAATGGTTGCTTCTCAAGGCATAACTATTGGTCAGTACTCAACTTAA

Coding sequence (CDS)

ATGTTGGTTTCTAGGAGCATCAGCATGTGGTCTTTGCCTGCTATAGGGTGTTCGAACCCTTTTGCATTTGCTCGCTTTAGAGGTTTTTGTGCTTCTAGTCAGCTACCTGTGTCTCCTAAAGACAAGACCCTGAGAACAATTTACAATTCTGGAGTCATTGCTTGCCTTCGGGCTAGCAGTGCAGAGCTGGCAATGAGTGCTGCTTGTGCTGCGCTAAATGGTGGAATATCAGTTCTGGAGATTGTTATGTCAACGCCTGGTGTGCTTGAGGTTCTACAACAGTTGCTGCAAGACTATCCTACAAGAACGTTGGGAGTTGGGACAGTTCTTAATATTAAGGATGCAAAGAATGCTGTAAAAGCTGGAGCCAAGTTTCTAATGAGTCCTACTATGGTGAAGATTATTTCAACTGATTCGCAGGGTATCATGGATGATATTGAAGGCGAGTTCTTATATATACCTGGTGTGATGACCCCAACAGAAGTACTGACTGCATATGAAGCTGGCGCTGAGATTGTTAAAGTTTATCCAGTTTCTGCATTAGGTGGTATTAAATATATATCAGCCCTCAAGAAGCCTTTTCCGCATATCTCAATGGTTGCTTCTCAAGGCATAACTATTGGTCAGTACTCAACTTAA

Protein sequence

MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSALGGIKYISALKKPFPHISMVASQGITIGQYST

Homology

[Close]

BLAST of Cla022904 vs. Swiss-Prot
Match: ALKH_ECO57 (KHG/KDPG aldolase OS=Escherichia coli O157:H7 GN=eda PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = 1


Query: 52  VIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLN 111
           V+  +     E A+  A A + GG+ VLE+ + T   ++ ++ + ++ P   +G GTVLN
Sbjct: 17  VVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLN 76

Query: 112 IKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAE 171
            +      +AGA+F +SP + + +      +    EG    IPG+ T +E++   + G +
Sbjct: 77  PQQLAEVTEAGAQFAISPGLTEPL------LKAATEGTIPLIPGISTVSELMLGMDYGLK 136

Query: 172 IVKVYPVSALGGIKYISALKKPFPHISMVASQGITIGQY 211
             K +P  A GG+K + A+  PF  +    + GI+   Y
Sbjct: 137 EFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANY 169

[Close]

BLAST of Cla022904 vs. Swiss-Prot
Match: ALKH_ECOL6 (KHG/KDPG aldolase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=eda PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = 1


Query: 52  VIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLN 111
           V+  +     E A+  A A + GG+ VLE+ + T   ++ ++ + ++ P   +G GTVLN
Sbjct: 17  VVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLN 76

Query: 112 IKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAE 171
            +      +AGA+F +SP + + +      +    EG    IPG+ T +E++   + G +
Sbjct: 77  PQQLAEVTEAGAQFAISPGLTEPL------LKAATEGTIPLIPGISTVSELMLGMDYGLK 136

Query: 172 IVKVYPVSALGGIKYISALKKPFPHISMVASQGITIGQY 211
             K +P  A GG+K + A+  PF  +    + GI+   Y
Sbjct: 137 EFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANY 169

[Close]

BLAST of Cla022904 vs. Swiss-Prot
Match: ALKH_ECOLI (KHG/KDPG aldolase OS=Escherichia coli (strain K12) GN=eda PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = 1


Query: 52  VIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLN 111
           V+  +     E A+  A A + GG+ VLE+ + T   ++ ++ + ++ P   +G GTVLN
Sbjct: 17  VVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLN 76

Query: 112 IKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAE 171
            +      +AGA+F +SP + + +      +    EG    IPG+ T +E++   + G +
Sbjct: 77  PQQLAEVTEAGAQFAISPGLTEPL------LKAATEGTIPLIPGISTVSELMLGMDYGLK 136

Query: 172 IVKVYPVSALGGIKYISALKKPFPHISMVASQGITIGQY 211
             K +P  A GG+K + A+  PF  +    + GI+   Y
Sbjct: 137 EFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANY 169

[Close]

BLAST of Cla022904 vs. Swiss-Prot
Match: ALKH_SHIFL (KHG/KDPG aldolase OS=Shigella flexneri GN=eda PE=3 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 44/159 (27.67%), Postives = 78/159 (49.06%), Query Frame = 1


Query: 52  VIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLN 111
           V+  +     E A+  A A + GG+ VLE+ + T   ++ ++ + ++ P   +G GTVLN
Sbjct: 17  VVPVIVVKKLEHAVPMAKALVAGGVRVLEVTLRTECAVDAIRAIAKEVPEAIVGAGTVLN 76

Query: 112 IKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAE 171
            +      +AGA+F +SP + + +      +    EG    IPG+ T +E++   + G +
Sbjct: 77  PQQLAEVTEAGAQFAISPGLTEPL------LKAATEGTIPLIPGISTVSELMLGMDYGLK 136

Query: 172 IVKVYPVSALGGIKYISALKKPFPHISMVASQGITIGQY 211
             K +P  A GG+K + A+  PF  +    + GI+   Y
Sbjct: 137 EFKFFPAEANGGVKALQAIAGPFSQVRFCPTGGISPANY 169

[Close]

BLAST of Cla022904 vs. Swiss-Prot
Match: ALKH_DICD3 (KHG/KDPG aldolase OS=Dickeya dadantii (strain 3937) GN=eda PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.2e-14
Identity = 46/159 (28.93%), Postives = 77/159 (48.43%), Query Frame = 1


Query: 52  VIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLN 111
           V+  +  +  E A+  A A + GG+ VLE+ + T   +E ++ + Q+ P   +G GTV N
Sbjct: 17  VVPVIVINKLEHAVPMAKALVAGGVRVLELTLRTECAVEAIRLIAQEVPDAIVGAGTVTN 76

Query: 112 IKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAE 171
            +       AGA+F +SP + + +      +    EG    IPG+ T +E++   + G  
Sbjct: 77  PQQLAEVTAAGAQFAISPGLTEPL------LKAATEGTIPLIPGISTVSELMLGMDYGLR 136

Query: 172 IVKVYPVSALGGIKYISALKKPFPHISMVASQGITIGQY 211
             K +P  A GG+K + A+  PF  I    + GI++  Y
Sbjct: 137 EFKFFPAEANGGVKALQAIAGPFGKIRFCPTGGISLKNY 169

[Close]

BLAST of Cla022904 vs. TrEMBL
Match: A0A0A0KPQ0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583300 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-95
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 1


Query: 1   MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASS 60
           MLVSRSISMWSLPAIGC  P AFARFR FCASSQLP+ PKD+TLRTI+NSGVIACLRASS
Sbjct: 1   MLVSRSISMWSLPAIGCWYPCAFARFRVFCASSQLPLPPKDETLRTIHNSGVIACLRASS 60

Query: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVK 120
           AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPT+TLGVGTVLNIKDAKNAVK
Sbjct: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTKTLGVGTVLNIKDAKNAVK 120

Query: 121 AGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSA 180
           AGAKFLMSPTMVK I      IM DIEGEFLYIPGVMTPTEVLTAYE+G+EIVKVYPVSA
Sbjct: 121 AGAKFLMSPTMVKGI------IMGDIEGEFLYIPGVMTPTEVLTAYESGSEIVKVYPVSA 180

Query: 181 LGGIKYISALKKPFPHISMVASQGITI 208
           LGGIKYISALKKPFPHISMVASQGITI
Sbjct: 181 LGGIKYISALKKPFPHISMVASQGITI 201

[Close]

BLAST of Cla022904 vs. TrEMBL
Match: A0A0S3RS39_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G053400 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.6e-57
Identity = 124/209 (59.33%), Postives = 155/209 (74.16%), Query Frame = 1


Query: 6   SISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASSAELAM 65
           ++S+   P    S P      R  C    L  S  DKTL  I NSG+IACLRA+SAE+A+
Sbjct: 31  TLSLCQWPIFSSSPPSLRMHVRVSCGIPHLSASAVDKTLSQINNSGIIACLRANSAEVAL 90

Query: 66  SAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVKAGAKF 125
            AA AA+ GG+SVLEIV+STPGV EVLQQL++++PT  +GVGTVL I+DAKNA+ AGAKF
Sbjct: 91  KAANAAIAGGVSVLEIVVSTPGVFEVLQQLVKEHPTMAIGVGTVLKIEDAKNAINAGAKF 150

Query: 126 LMSPTMVKIISTDSQGIMDDIE-GEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSALGGI 185
           L+SP  VK I      +MD ++ GE LYIPG MTPTE+L+A++AGA++VK+YP SALGG 
Sbjct: 151 LLSPATVKDIM-----VMDYVQSGEVLYIPGTMTPTEILSAWDAGAKMVKIYPASALGGF 210

Query: 186 KYISALKKPFPHISMVASQGIT---IGQY 211
           +YISALKK FPH+SMVASQGIT   IG+Y
Sbjct: 211 QYISALKKTFPHVSMVASQGITIDAIGEY 234

[Close]

BLAST of Cla022904 vs. TrEMBL
Match: A0A067L007_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24577 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.8e-57
Identity = 132/211 (62.56%), Postives = 157/211 (74.41%), Query Frame = 1


Query: 1   MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVS---PKDKTLRTIYNSGVIACLR 60
           M+V+ S+  W  P +         RFR +  SS  P+S    +++TL  I+NSGVIACLR
Sbjct: 1   MVVAASVCSWR-PNLAPQLSQNLKRFRVY--SSLPPISFSSTRERTLSLIHNSGVIACLR 60

Query: 61  ASSAELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKN 120
           A+SAELA  AA AAL  GISVLEIVMSTPGV +VLQQL++D+PT  LGVGTVLN +DA N
Sbjct: 61  ANSAELAFEAASAALRAGISVLEIVMSTPGVFQVLQQLVKDHPTVALGVGTVLNAEDAIN 120

Query: 121 AVKAGAKFLMSPTMVKIISTDSQGIMDDI-EGEFLYIPGVMTPTEVLTAYEAGAEIVKVY 180
           A +AGAKFLMSP  V        GIMD + +GE LYIPG MTPTE+L+AY+AGA+I+KVY
Sbjct: 121 AKRAGAKFLMSPATV-------MGIMDVVLDGEVLYIPGAMTPTEILSAYDAGAKIIKVY 180

Query: 181 PVSALGGIKYISALKKPFPHISMVASQGITI 208
           PVSALGG +YISALKKPF HISMVASQGI I
Sbjct: 181 PVSALGGTQYISALKKPFAHISMVASQGIMI 201

[Close]

BLAST of Cla022904 vs. TrEMBL
Match: A2Q5T0_MEDTR (KDPG and KHG aldolase OS=Medicago truncatula GN=MTR_7g009670 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.8e-57
Identity = 124/175 (70.86%), Postives = 144/175 (82.29%), Query Frame = 1


Query: 34  QLPVSPK-DKTLRTIYNSGVIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVLEVL 93
           QL VS   DKTL  I NSGVIACLRA+SAE+A+ AA AA+ GGISVLEIVMSTPGV EVL
Sbjct: 40  QLSVSTTVDKTLCQINNSGVIACLRANSAEVALEAANAAIAGGISVLEIVMSTPGVFEVL 99

Query: 94  QQLLQDYPTRTLGVGTVLNIKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDIEGEFLY 153
           QQL++++P  TLGVGTVL I+DAK A+KAGAKFLMSP  VK I    QG      G+ LY
Sbjct: 100 QQLVKEHPRITLGVGTVLRIEDAKTAIKAGAKFLMSPANVKDILNYVQG------GDILY 159

Query: 154 IPGVMTPTEVLTAYEAGAEIVKVYPVSALGGIKYISALKKPFPHISMVASQGITI 208
           IPG MTPTE+L+AY+AGA++VK+YPVSALGG +YI+ALKKPFPH+SMVASQGITI
Sbjct: 160 IPGTMTPTEILSAYDAGAKMVKIYPVSALGGFQYIAALKKPFPHVSMVASQGITI 208

[Close]

BLAST of Cla022904 vs. TrEMBL
Match: B9GLV9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07070g PE=4 SV=2)

HSP 1 Score: 228.8 bits (582), Expect = 6.2e-57
Identity = 128/186 (68.82%), Postives = 149/186 (80.11%), Query Frame = 1


Query: 31  ASSQLPVSPK-DKTLRTIYNSGVIACLRASSAELAMSAACAALNGGISVLEIVMSTPGVL 90
           +SS L +SP   KT   I NSGVIACLRA+SAELA  AA AALNGGISVLEIVMSTPGV 
Sbjct: 29  SSSSLSLSPIIQKTSSLIQNSGVIACLRANSAELAYEAATAALNGGISVLEIVMSTPGVF 88

Query: 91  EV-LQQLLQDYPTRTLGVGTVLNIKDAKNAVKAGAKFLMSPTMVKIISTDSQGIMDDI-E 150
           +V L+QL++DYPT  LGVGT LN +DA+NA+ AG+KF MSP  VK        IMDD+ +
Sbjct: 89  QVVLRQLVKDYPTLALGVGTALNAEDARNAMNAGSKFFMSPATVK-------DIMDDVVK 148

Query: 151 GEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSALGGIKYISALKKPFPHISMVASQGIT- 210
            E LYIPGVMTPTE+L+AY+AGA++VKVYPVSALGG++YISALKKPFPHI MVASQGIT 
Sbjct: 149 DEILYIPGVMTPTEILSAYDAGAKMVKVYPVSALGGVQYISALKKPFPHIPMVASQGITI 207

[Close]

BLAST of Cla022904 vs. NCBI nr
Match: gi|778704362|ref|XP_011655527.1| (PREDICTED: uncharacterized protein LOC101218794 isoform X1 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 1


Query: 1   MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASS 60
           MLVSRSISMWSLPAIGC  P AFARFR FCASSQLP+ PKD+TLRTI+NSGVIACLRASS
Sbjct: 1   MLVSRSISMWSLPAIGCWYPCAFARFRVFCASSQLPLPPKDETLRTIHNSGVIACLRASS 60

Query: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVK 120
           AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPT+TLGVGTVLNIKDAKNAVK
Sbjct: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTKTLGVGTVLNIKDAKNAVK 120

Query: 121 AGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSA 180
           AGAKFLMSPTMVK I      IM DIEGEFLYIPGVMTPTEVLTAYE+G+EIVKVYPVSA
Sbjct: 121 AGAKFLMSPTMVKGI------IMGDIEGEFLYIPGVMTPTEVLTAYESGSEIVKVYPVSA 180

Query: 181 LGGIKYISALKKPFPHISMVASQGITI 208
           LGGIKYISALKKPFPHISMVASQGITI
Sbjct: 181 LGGIKYISALKKPFPHISMVASQGITI 201

[Close]

BLAST of Cla022904 vs. NCBI nr
Match: gi|700196423|gb|KGN51600.1| (hypothetical protein Csa_5G583300 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 1


Query: 1   MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASS 60
           MLVSRSISMWSLPAIGC  P AFARFR FCASSQLP+ PKD+TLRTI+NSGVIACLRASS
Sbjct: 1   MLVSRSISMWSLPAIGCWYPCAFARFRVFCASSQLPLPPKDETLRTIHNSGVIACLRASS 60

Query: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVK 120
           AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPT+TLGVGTVLNIKDAKNAVK
Sbjct: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTKTLGVGTVLNIKDAKNAVK 120

Query: 121 AGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSA 180
           AGAKFLMSPTMVK I      IM DIEGEFLYIPGVMTPTEVLTAYE+G+EIVKVYPVSA
Sbjct: 121 AGAKFLMSPTMVKGI------IMGDIEGEFLYIPGVMTPTEVLTAYESGSEIVKVYPVSA 180

Query: 181 LGGIKYISALKKPFPHISMVASQGITI 208
           LGGIKYISALKKPFPHISMVASQGITI
Sbjct: 181 LGGIKYISALKKPFPHISMVASQGITI 201

[Close]

BLAST of Cla022904 vs. NCBI nr
Match: gi|778704369|ref|XP_011655529.1| (PREDICTED: uncharacterized protein LOC101218794 isoform X2 [Cucumis sativus])

HSP 1 Score: 356.3 bits (913), Expect = 3.7e-95
Identity = 188/207 (90.82%), Postives = 194/207 (93.72%), Query Frame = 1


Query: 1   MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASS 60
           MLVSRSISMWSLPAIGC  P AFARFR FCASSQLP+ PKD+TLRTI+NSGVIACLRASS
Sbjct: 1   MLVSRSISMWSLPAIGCWYPCAFARFRVFCASSQLPLPPKDETLRTIHNSGVIACLRASS 60

Query: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVK 120
           AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPT+TLGVGTVLNIKDAKNAVK
Sbjct: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTKTLGVGTVLNIKDAKNAVK 120

Query: 121 AGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSA 180
           AGAKFLMSPTMVK I      IM DIEGEFLYIPGVMTPTEVLTAYE+G+EIVKVYPVSA
Sbjct: 121 AGAKFLMSPTMVKGI------IMGDIEGEFLYIPGVMTPTEVLTAYESGSEIVKVYPVSA 180

Query: 181 LGGIKYISALKKPFPHISMVASQGITI 208
           LGGIKYISALKKPFPHISMVASQGITI
Sbjct: 181 LGGIKYISALKKPFPHISMVASQGITI 201

[Close]

BLAST of Cla022904 vs. NCBI nr
Match: gi|659090293|ref|XP_008445938.1| (PREDICTED: uncharacterized protein LOC103488815 [Cucumis melo])

HSP 1 Score: 354.4 bits (908), Expect = 1.4e-94
Identity = 188/207 (90.82%), Postives = 191/207 (92.27%), Query Frame = 1


Query: 1   MLVSRSISMWSLPAIGCSNPFAFARFRGFCASSQLPVSPKDKTLRTIYNSGVIACLRASS 60
           MLVSRSISMWSLP IGC NP AFARFR FCASSQLPV  KDKTLRTI+NSGVIACLRASS
Sbjct: 1   MLVSRSISMWSLPTIGCWNPCAFARFRVFCASSQLPVPSKDKTLRTIHNSGVIACLRASS 60

Query: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVK 120
           AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPT+TLGVGTVLNIKDAKNAVK
Sbjct: 61  AELAMSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTKTLGVGTVLNIKDAKNAVK 120

Query: 121 AGAKFLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSA 180
           AGAKFLMSPTMVK I      IM DIE EFLYIPGVMTPTEVLTAYE+G EIVKVYPVSA
Sbjct: 121 AGAKFLMSPTMVKGI------IMGDIEDEFLYIPGVMTPTEVLTAYESGCEIVKVYPVSA 180

Query: 181 LGGIKYISALKKPFPHISMVASQGITI 208
           LGGIKYISALKKPFPHISMVASQGITI
Sbjct: 181 LGGIKYISALKKPFPHISMVASQGITI 201

[Close]

BLAST of Cla022904 vs. NCBI nr
Match: gi|778704372|ref|XP_011655530.1| (PREDICTED: uncharacterized protein LOC101218794 isoform X3 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 4.9e-63
Identity = 132/143 (92.31%), Postives = 135/143 (94.41%), Query Frame = 1


Query: 65  MSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTRTLGVGTVLNIKDAKNAVKAGAK 124
           MSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPT+TLGVGTVLNIKDAKNAVKAGAK
Sbjct: 1   MSAACAALNGGISVLEIVMSTPGVLEVLQQLLQDYPTKTLGVGTVLNIKDAKNAVKAGAK 60

Query: 125 FLMSPTMVKIISTDSQGIMDDIEGEFLYIPGVMTPTEVLTAYEAGAEIVKVYPVSALGGI 184
           FLMSPTMVK I      IM DIEGEFLYIPGVMTPTEVLTAYE+G+EIVKVYPVSALGGI
Sbjct: 61  FLMSPTMVKGI------IMGDIEGEFLYIPGVMTPTEVLTAYESGSEIVKVYPVSALGGI 120

Query: 185 KYISALKKPFPHISMVASQGITI 208
           KYISALKKPFPHISMVASQGITI
Sbjct: 121 KYISALKKPFPHISMVASQGITI 137

The following BLAST results are available for this feature:

BLAST of Cla022904 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALKH_ECO57	3.2e-14	27.67	KHG/KDPG aldolase OS=Escherichia coli O157:H7 GN=eda PE=3 SV=1	[more]
ALKH_ECOL6	3.2e-14	27.67	KHG/KDPG aldolase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)...	[more]
ALKH_ECOLI	3.2e-14	27.67	KHG/KDPG aldolase OS=Escherichia coli (strain K12) GN=eda PE=1 SV=1	[more]
ALKH_SHIFL	3.2e-14	27.67	KHG/KDPG aldolase OS=Shigella flexneri GN=eda PE=3 SV=1	[more]
ALKH_DICD3	4.2e-14	28.93	KHG/KDPG aldolase OS=Dickeya dadantii (strain 3937) GN=eda PE=3 SV=1	[more]

BLAST of Cla022904 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPQ0_CUCSA	2.6e-95	90.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G583300 PE=4 SV=1	[more]
A0A0S3RS39_PHAAN	1.6e-57	59.33	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G053400 PE=...	[more]
A0A067L007_JATCU	4.8e-57	62.56	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24577 PE=4 SV=1	[more]
A2Q5T0_MEDTR	4.8e-57	70.86	KDPG and KHG aldolase OS=Medicago truncatula GN=MTR_7g009670 PE=4 SV=1	[more]
B9GLV9_POPTR	6.2e-57	68.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s07070g PE=4 SV=2	[more]

BLAST of Cla022904 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778704362\|ref\|XP_011655527.1\|	3.7e-95	90.82	PREDICTED: uncharacterized protein LOC101218794 isoform X1 [Cucumis sativus]	[more]
gi\|700196423\|gb\|KGN51600.1\|	3.7e-95	90.82	hypothetical protein Csa_5G583300 [Cucumis sativus]	[more]
gi\|778704369\|ref\|XP_011655529.1\|	3.7e-95	90.82	PREDICTED: uncharacterized protein LOC101218794 isoform X2 [Cucumis sativus]	[more]
gi\|659090293\|ref\|XP_008445938.1\|	1.4e-94	90.82	PREDICTED: uncharacterized protein LOC103488815 [Cucumis melo]	[more]
gi\|778704372\|ref\|XP_011655530.1\|	4.9e-63	92.31	PREDICTED: uncharacterized protein LOC101218794 isoform X3 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000887	Aldlse_KDPG_KHG
IPR013785	Aldolase_TIM

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016829	lyase activity
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0006525	arginine metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006560	proline metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016829	lyase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0008675	2-dehydro-3-deoxy-phosphogluconate aldolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022904	Cla022904.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000887	KDPG/KHG aldolase	PFAM	PF01081	Aldolase	coord: 50..208 score: 9.2
IPR013785	Aldolase-type TIM barrel	GENE3D	G3DSA:3.20.20.70		coord: 41..210 score: 1.1
None	No IPR available	PANTHER	PTHR30246	2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE	coord: 34..207 score: 1.7
None	No IPR available	PANTHER	PTHR30246:SF1	2-DEHYDRO-3-DEOXY-6-PHOSPHOGALACTONATE ALDOLASE	coord: 34..207 score: 1.7
None	No IPR available	unknown	SSF51569	Aldolase	coord: 42..209 score: 7.33

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla022904	Cla97C11G218900	Watermelon (97103) v2	wmwmbB358
Cla022904	Csa5G583300	Cucumber (Chinese Long) v2	cuwmB432
Cla022904	Cucsa.076430	Cucumber (Gy14) v1	cgywmB080
Cla022904	CmaCh04G012960	Cucurbita maxima (Rimu)	cmawmB728
Cla022904	CmoCh04G013650	Cucurbita moschata (Rifu)	cmowmB724
Cla022904	Cp4.1LG01g09840	Cucurbita pepo (Zucchini)	cpewmB456
Cla022904	MELO3C034052.2	Melon (DHL92) v3.6.1	medwmB076
Cla022904	Bhi07G000966	Wax gourd	wgowmB564

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla022904	Cucurbita maxima (Rimu)	cmawmB400
Cla022904	Cucurbita moschata (Rifu)	cmowmB394
Cla022904	Wild cucumber (PI 183967)	cpiwmB444
Cla022904	Melon (DHL92) v3.5.1	mewmB077
Cla022904	Watermelon (Charleston Gray)	wcgwmB103
Cla022904	Cucurbita pepo (Zucchini)	cpewmB055
Cla022904	Bottle gourd (USVL1VR-Ls)	lsiwmB339
Cla022904	Cucumber (Gy14) v2	cgybwmB405
Cla022904	Silver-seed gourd	carwmB0723
Cla022904	Silver-seed gourd	carwmB0845
Cla022904	Cucumber (Chinese Long) v3	cucwmB458