Cla022881 (gene) Watermelon (97103) v1

Overview
NameCla022881
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionLipoyl synthase (AHRD V1 ***- E4UWN0_ARTGP); contains Interpro domain(s) IPR003698 Lipoate synthase
LocationChr11 : 15221103 .. 15224753 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTCATCCTTCGCTCTCAGTTTCCAACCCTTCTTCTTCTTCTCATTCGCCTCTCCCATTTGTCAAACTCCGCAACTTCTCCAATAATTCTCCCCGTTATCGCCGGTCGATTTCAGTGATTCGATGTGAAGCTCTCGATTCTTCTTCCTCAGAGGTGGCGGCACAGTCTTCTTCTTCTTCTTCATTGCCGTTATCGAAGGTGGGAAGTAGGGTTATGGAATCGCAAGAGGGTTCTTCCAAAGCAGGTCCATATCCTGGAGGAATGGGACCTCACACCGGCAGAGATCCGACTGTGAAGAAGCCTGGTTGGTTGAGGCAACGAGCTCCTCAGGGAGAGAAATTTCAGGAGGTCAAGGACTCCTTGTCTCGATTGAATCTCAATACTGTTTGTGAAGAGGCCCAATGCCCCAACATTGGAGAGGTCTCTCTCTTTCTCTCTTTCTCTCTGTCCCTATGAGAACTTAGAAGAGCTTATGATAGTTAACTTCATACACTGATTCGTTTTATACCTTCTGATTCAAAGAACTATTCTCAGATGCTTGAGTTCATTAGGGAGTATGGTTAACAGTTACCTCAGAGTAGTGATTTGTGATTTGAATTTGTTTTGATTTTCTGTTTTTCAGTATGTGGAATGTGGTTTTTGTCAATGTGGGTAGCTTTTAATTGCACAAGTATTCAGGACTAACTATTATCCTCATGATTCTAATGTTTTGGGCAGTGTTGGAATGGGGGAGGGGATGGAATTGCAACTGCTACGATTATGCTTCTTGGGGATACATGCACTCGGGGATGTAGATTTTGTGCTGTAAAGACCAGCAGAAACCCTGCACCTCCTGATCCAATGGAACCACTTAACACTGCTAAAGCTATTGCCAGTTGGGGGTATGCAATAATTACCCTGTATTTCATAATAGAATCTACCTTCTTTTTGTCTGTTAAGAGTGAATATGGATGGATGTTTGTTTAACTTGAACTTGTGTTGATAATGTCGAGTTATGTCTATATGGTAGAATGTGCTACATGGTTGTGTTAAGACTGTTATATCCTGTTCTTTTTCTTCTTTCTTTCTTCTCTTTATCAATTTGTTAACAGAGGAACTTCTCTAGACAGGATTGATTAATGTGTATTCTAAAACATGTCACATTTTTTTTTTTTTTTTTTTTAATTTTTAGAAAAACATAGCACAAAACTGAATCTTTTTATTGTATTTTATATTGTGCTTGAATTTGAGTTTGACTTAGATTATGCTACTGTTGTAATATTTCTTCTGCTATAGTTGGAAATACATATTTCTTTTATTTTGTGTATGTATATACTTCTTGTTGATATCCAGATTTTTTGGTGTCCTGCTATAAATATAAGATAAAAGAGCCGTTAGCTGTTATGGAATGGTTGAACTACATTAATATCTCAACATGAAGAGGAAGTCGAATGAAATCTTGATATTATCTTGGTATAGGGTTTGCTTGGCATATATTGTCTGTTTTCATCCTTTTGTAATCCTATTGATAGTTCATCCTTTTGTAATTTCATTTTATCATTGAAATTGTTACGGTTTCCTATAAAAAAAAAATGTATGTTATCATCTACTTATTTTAAATTAATGGGTTTATCTAATTTTTAATAATATTGAATTGTTTTTCTGTATTCTCTTTTAGTGTGGATTACATCGTCCTAACAAGTGTAGACCGTGATGATATTCCTGATGGAGGAAGTGGGCATTTTGCTCAGACGGTTAAAGCTATGAAGGTCAAACATATTTTTCTACAATAACTTTTGTCTCCTTATCTATAAACTGTAACTGTTGAACGTTTCTTGGAAAAGTTACTAGAAGCATGGTTAGTCTTAATGAATCTATTCTGTAGGAACTTAAGCCCGAGATCATGGTTGAATGTTTAACTTCTGACTTCCGAGGTGACTTGAAGGCTGTGGAGACTCTTGTGCACTCAGGGTTAGATGTATTTGCTCATAATATTGAGACTGTGAAACGACTTCAACGTATTGTTAGAGATCCTCGAGCTGGGTAAGTTGCATCACCAATTAACTTCCGTTGCAAACTTGATTTTGAATGTAGTATTTCCTTAAGGGCCTAAATATAAAACTCTTGAGAGAAATCCTCGAAAAGATACAAAAGAAATAATGGCATTTAGCTTGTCATGAATTGTAAGCAAATAAAACTATGTCCGTAGTTTCTATTTTAGTAATATTTAAGAAAATAAAGTTATTTTTGTGATAGACCTGGCATTTGCTTTCTGAAAGAACAACGATGATTTCTCAAAGTCAAATAGGCTATAGTTTTGAACACTATCTTGTTTGACACCAATTCATTTTTCCAAGTTTTTTTTTTCTTGCCCCTTCTGGTCTACATGGTGTTAAAGGGTTGATATAATTAAATTTACTATAACCTATCAGCTTAAGCTTTTGGATCAACCGGAACATGATATCAGAGTAGGTCTTGTGTCTTTTTAGGTCGGATTTAACACATGGCATCCTTCTCATTATAAGATGAAAAGTTGCATTGGAATGTGGGTGCAAAGGCGTGCCTGTTTTAACACCATTATGGTAAAAGTCCTTCAAGTCCTTTTACAAATTACAAGAAGTTACTTTTGGGTGTGAGGAATATGGTTTTTTTCTTTCATCAATTGAACTTCGTTTTGAAAATTTTATTATTTCATTTTCCCTTCTGTAGTTTTATTACTTGTTCTAGCGTGTCTTCAAAATCAGTAAGCAAGGGCTTTAACCTAGTTGGAATCCTTATTATTCTTCAGTTTTTTCCTTTATTACTAGCAATTCATGCCTCACCTAGTCGAGATTCTTACGATCGGTTTGGTTCTATGCAGTTATGACCAGAGCTTAGCCGTGCTAAAACATGCAAAGCACAGTAAGGAGGGAATGATCACCAAATCTTCAATCATGCTGGGCCTTGGAGAATCCGATGATGAATTGAAGGAAGCTCTCGATGATTTAAGGGCCATAGATGTGGATATTCTTACACTTGGGCAGTATTTGCAGGTTTGTTAATACTTAGCTATCTTACTCGTCCAGTCATATTTATTCCTTGCATTGAAATAAAATAATCCTTGCTTCAATTTACCTGCCACGGAACCAACTTAAATGAAGACCAGCCAAGTTTGGCCGAGTAATTTTCGTAGTTCTTTTTCTTTGTTGCTCATAATGGTTGTAATGTAATGTAGCATTTTTGTAATTCCTTGGGTGTTTAGTCTGATAACTGCTTAGAGCAACTAGGGCCTGCAGAAATTCATGCATATTAGCGGTTTGAGTAAGACCCTCACTTGTTGACGATTTAATCGTTATTCTTAAGACACGGTCATCTTCTTGCAGCCCACCCCATTACACCTGACTGTCAAAGAATATGTCACACCCGAAAAGTTTGCATTCTGGAAAGAATATGGGGAGTCGATTGGATTCCGATATGTGGCTAGTGGGCCCTTGGTAAGCTTTATTCGTAATGCATCGTTCTTCCATTGCCAAGACAATTGCAGCCATTTCCTATACATGATTGCTACCAAAATGAGTTCATTTGATACTTCTTTCCTTATATGGTCAGGTTCGATCCTCATATCGGGCAGGCGAGCTCTTTGTCCAAACCATGGTTAGAGAAAGGGTCAAAAGCTCAACTGTAAATTGA

mRNA sequence

ATGATTCATCCTTCGCTCTCAGTTTCCAACCCTTCTTCTTCTTCTCATTCGCCTCTCCCATTTGTCAAACTCCGCAACTTCTCCAATAATTCTCCCCGTTATCGCCGGTCGATTTCAGTGATTCGATGTGAAGCTCTCGATTCTTCTTCCTCAGAGGTGGCGGCACAGTCTTCTTCTTCTTCTTCATTGCCGTTATCGAAGGTGGGAAGTAGGGTTATGGAATCGCAAGAGGGTTCTTCCAAAGCAGGTCCATATCCTGGAGGAATGGGACCTCACACCGGCAGAGATCCGACTGTGAAGAAGCCTGGTTGGTTGAGGCAACGAGCTCCTCAGGGAGAGAAATTTCAGGAGGTCAAGGACTCCTTGTCTCGATTGAATCTCAATACTGTTTGTGAAGAGGCCCAATGCCCCAACATTGGAGAGTGTTGGAATGGGGGAGGGGATGGAATTGCAACTGCTACGATTATGCTTCTTGGGGATACATGCACTCGGGGATGTAGATTTTGTGCTGTAAAGACCAGCAGAAACCCTGCACCTCCTGATCCAATGGAACCACTTAACACTGCTAAAGCTATTGCCAGTTGGGGTGTGGATTACATCGTCCTAACAAGTGTAGACCGTGATGATATTCCTGATGGAGGAAGTGGGCATTTTGCTCAGACGGTTAAAGCTATGAAGGAACTTAAGCCCGAGATCATGGTTGAATGTTTAACTTCTGACTTCCGAGGTGACTTGAAGGCTGTGGAGACTCTTGTGCACTCAGGGTTAGATGTATTTGCTCATAATATTGAGACTGTGAAACGACTTCAACGTATTGTTAGAGATCCTCGAGCTGGTTATGACCAGAGCTTAGCCGTGCTAAAACATGCAAAGCACAGTAAGGAGGGAATGATCACCAAATCTTCAATCATGCTGGGCCTTGGAGAATCCGATGATGAATTGAAGGAAGCTCTCGATGATTTAAGGGCCATAGATGTGGATATTCTTACACTTGGGCAGTATTTGCAGCCCACCCCATTACACCTGACTGTCAAAGAATATGTCACACCCGAAAAGTTTGCATTCTGGAAAGAATATGGGGAGTCGATTGGATTCCGATATGTGGCTAGTGGGCCCTTGGTTCGATCCTCATATCGGGCAGGCGAGCTCTTTGTCCAAACCATGGTTAGAGAAAGGGTCAAAAGCTCAACTGTAAATTGA

Coding sequence (CDS)

ATGATTCATCCTTCGCTCTCAGTTTCCAACCCTTCTTCTTCTTCTCATTCGCCTCTCCCATTTGTCAAACTCCGCAACTTCTCCAATAATTCTCCCCGTTATCGCCGGTCGATTTCAGTGATTCGATGTGAAGCTCTCGATTCTTCTTCCTCAGAGGTGGCGGCACAGTCTTCTTCTTCTTCTTCATTGCCGTTATCGAAGGTGGGAAGTAGGGTTATGGAATCGCAAGAGGGTTCTTCCAAAGCAGGTCCATATCCTGGAGGAATGGGACCTCACACCGGCAGAGATCCGACTGTGAAGAAGCCTGGTTGGTTGAGGCAACGAGCTCCTCAGGGAGAGAAATTTCAGGAGGTCAAGGACTCCTTGTCTCGATTGAATCTCAATACTGTTTGTGAAGAGGCCCAATGCCCCAACATTGGAGAGTGTTGGAATGGGGGAGGGGATGGAATTGCAACTGCTACGATTATGCTTCTTGGGGATACATGCACTCGGGGATGTAGATTTTGTGCTGTAAAGACCAGCAGAAACCCTGCACCTCCTGATCCAATGGAACCACTTAACACTGCTAAAGCTATTGCCAGTTGGGGTGTGGATTACATCGTCCTAACAAGTGTAGACCGTGATGATATTCCTGATGGAGGAAGTGGGCATTTTGCTCAGACGGTTAAAGCTATGAAGGAACTTAAGCCCGAGATCATGGTTGAATGTTTAACTTCTGACTTCCGAGGTGACTTGAAGGCTGTGGAGACTCTTGTGCACTCAGGGTTAGATGTATTTGCTCATAATATTGAGACTGTGAAACGACTTCAACGTATTGTTAGAGATCCTCGAGCTGGTTATGACCAGAGCTTAGCCGTGCTAAAACATGCAAAGCACAGTAAGGAGGGAATGATCACCAAATCTTCAATCATGCTGGGCCTTGGAGAATCCGATGATGAATTGAAGGAAGCTCTCGATGATTTAAGGGCCATAGATGTGGATATTCTTACACTTGGGCAGTATTTGCAGCCCACCCCATTACACCTGACTGTCAAAGAATATGTCACACCCGAAAAGTTTGCATTCTGGAAAGAATATGGGGAGTCGATTGGATTCCGATATGTGGCTAGTGGGCCCTTGGTTCGATCCTCATATCGGGCAGGCGAGCTCTTTGTCCAAACCATGGTTAGAGAAAGGGTCAAAAGCTCAACTGTAAATTGA

Protein sequence

MIHPSLSVSNPSSSSHSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSSSSLPLSKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTVN
Homology
[Close]
BLAST of Cla022881 vs. Swiss-Prot
Match: LISC1_ORYSJ (Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=LIP1P-1 PE=3 SV=1)

HSP 1 Score: 518.8 bits (1335), Expect = 5.1e-146
Identity = 262/358 (73.18%), Postives = 289/358 (80.73%), Query Frame = 1 

Query: 56  QSSSSSSLPLSKV----GSRVMESQEGS--------SKAGPYPG-----GMGPHTGRDPT 115
           QSS +  LP   +    G+ V  S+ GS          A P P        GP+TGRDP 
Sbjct: 3   QSSLARPLPRPPIRPACGNPVCRSRPGSVSVARCRAEAAPPAPAPAARRAAGPYTGRDPE 62

Query: 116 VKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGG------DGIAT 175
           VKKP WLRQRA QGEK+  +++S+  L LNTVC EAQCPNIGECWNGGG      DGIAT
Sbjct: 63  VKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEGDGIAT 122

Query: 176 ATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPD 235
           ATIM+LGDTCTRGCRFCAVKTS  P PPDP+EPLNTA A+ASWGVDY+VLTSVDRDD+PD
Sbjct: 123 ATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDRDDLPD 182

Query: 236 GGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRI 295
           GGS HFAQTV+A+KELKP I+VECLTSDFRGDL+AV  L +SGLDVFAHNIETV+ LQRI
Sbjct: 183 GGSSHFAQTVRALKELKPGILVECLTSDFRGDLEAVSALANSGLDVFAHNIETVRSLQRI 242

Query: 296 VRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRAIDVDILTLG 355
           VRDPRAGYDQSLAVLKHAK  KEGMITKSSIMLGLGE+D+E+K+A+ DLRAI VDILTLG
Sbjct: 243 VRDPRAGYDQSLAVLKHAKSCKEGMITKSSIMLGLGETDEEVKQAMIDLRAIGVDILTLG 302

Query: 356 QYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVR 391
           QYLQPT  HLTV+EYVTPEKF FWKEYGES+GFRYVASGPLVRSSYRAGELFVQ +VR
Sbjct: 303 QYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGELFVQNLVR 360

[Close]
BLAST of Cla022881 vs. Swiss-Prot
Match: LISC1_ORYSI (Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp. indica GN=LIP1P-1 PE=3 SV=2)

HSP 1 Score: 518.8 bits (1335), Expect = 5.1e-146
Identity = 262/358 (73.18%), Postives = 289/358 (80.73%), Query Frame = 1 

Query: 56  QSSSSSSLPLSKV----GSRVMESQEGS--------SKAGPYPG-----GMGPHTGRDPT 115
           QSS +  LP   +    G+ V  S+ GS          A P P        GP+TGRDP 
Sbjct: 3   QSSLARPLPRPPIRPACGNPVCRSRPGSVSVARCRAEAAPPAPAPAARRAAGPYTGRDPE 62

Query: 116 VKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGG------DGIAT 175
           VKKP WLRQRA QGEK+  +++S+  L LNTVC EAQCPNIGECWNGGG      DGIAT
Sbjct: 63  VKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGAGGEGDGIAT 122

Query: 176 ATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPD 235
           ATIM+LGDTCTRGCRFCAVKTS  P PPDP+EPLNTA A+ASWGVDY+VLTSVDRDD+PD
Sbjct: 123 ATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLTSVDRDDLPD 182

Query: 236 GGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRI 295
           GGS HFAQTV+A+KELKP I+VECLTSDFRGDL+AV  L +SGLDVFAHNIETV+ LQRI
Sbjct: 183 GGSSHFAQTVRALKELKPGILVECLTSDFRGDLEAVSALANSGLDVFAHNIETVRSLQRI 242

Query: 296 VRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRAIDVDILTLG 355
           VRDPRAGYDQSLAVLKHAK  KEGMITKSSIMLGLGE+D+E+K+A+ DLRAI VDILTLG
Sbjct: 243 VRDPRAGYDQSLAVLKHAKSCKEGMITKSSIMLGLGETDEEVKQAMIDLRAIGVDILTLG 302

Query: 356 QYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTMVR 391
           QYLQPT  HLTV+EYVTPEKF FWKEYGES+GFRYVASGPLVRSSYRAGELFVQ +VR
Sbjct: 303 QYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGELFVQNLVR 360

[Close]
BLAST of Cla022881 vs. Swiss-Prot
Match: LISC1_MAIZE (Lipoyl synthase 1, chloroplastic OS=Zea mays GN=LIP1P-1 PE=2 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 5.6e-145
Identity = 247/314 (78.66%), Postives = 274/314 (87.26%), Query Frame = 1 

Query: 90  GPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGG-- 149
           GP+TGRDP VKKP WLRQRA QGEK+  +++S+  L LNTVC EAQCPNIGECWNGGG  
Sbjct: 46  GPYTGRDPEVKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGA 105

Query: 150 ----DGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLT 209
               DGIATATIM+LGDTCTRGCRFCAVKTS  P PPDP+EPLNTA A+ASWGVDY+VLT
Sbjct: 106 GGEGDGIATATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLT 165

Query: 210 SVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNI 269
           SVDRDD+PDGGS HFAQTVKA+KELKP I+VECLTSDFRGDL+A+ +L  SGLDV+AHNI
Sbjct: 166 SVDRDDLPDGGSSHFAQTVKALKELKPGILVECLTSDFRGDLEAISSLASSGLDVYAHNI 225

Query: 270 ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRA 329
           ETV+ LQRIVRDPRAGYDQSLAVLKHAK  +EGM+TKSSIMLGLGE+D+E+K+A+ DLRA
Sbjct: 226 ETVRSLQRIVRDPRAGYDQSLAVLKHAKACREGMVTKSSIMLGLGETDEEVKQAMMDLRA 285

Query: 330 IDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGEL 389
           I VDILTLGQYLQPT  HLTV+EYVTPEKF FWKEYGES+GFRYVASGPLVRSSYRAGEL
Sbjct: 286 IGVDILTLGQYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGEL 345

Query: 390 FVQTMVRERVKSST 398
           FVQ +VR     S+
Sbjct: 346 FVQNLVRNNKTGSS 359

[Close]
BLAST of Cla022881 vs. Swiss-Prot
Match: LISC_SORBI (Lipoyl synthase, chloroplastic OS=Sorghum bicolor GN=LIP1P PE=3 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 7.3e-145
Identity = 247/314 (78.66%), Postives = 275/314 (87.58%), Query Frame = 1 

Query: 90  GPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGG-- 149
           GP+TGRDP VKKP WLRQRA QG+K+  +++S+  L LNTVC EAQCPNIGECWNGGG  
Sbjct: 53  GPYTGRDPEVKKPAWLRQRAAQGDKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGA 112

Query: 150 ----DGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLT 209
               DGIATATIM+LGDTCTRGCRFCAVKTS  P PPDP+EPLNTA A+ASWGVDY+VLT
Sbjct: 113 GGEGDGIATATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLT 172

Query: 210 SVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNI 269
           SVDRDD+PDGGS HFAQTV+A+KELKP I+VECLTSDFRGDL+AV +L +SGLDV+AHNI
Sbjct: 173 SVDRDDLPDGGSSHFAQTVRALKELKPGILVECLTSDFRGDLEAVSSLANSGLDVYAHNI 232

Query: 270 ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRA 329
           ETV+ LQRIVRDPRAGYDQSLAVLKHAK  +EGMITKSSIMLGLGE+D+E+K+A+ DLRA
Sbjct: 233 ETVRSLQRIVRDPRAGYDQSLAVLKHAKDCREGMITKSSIMLGLGETDEEVKQAMIDLRA 292

Query: 330 IDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGEL 389
           I VDILTLGQYLQPT  HLTV+EYVTPEKF FWKEYGES+GFRYVASGPLVRSSYRAGEL
Sbjct: 293 IGVDILTLGQYLQPTERHLTVREYVTPEKFQFWKEYGESVGFRYVASGPLVRSSYRAGEL 352

Query: 390 FVQTMVRERVKSST 398
           FVQ +VR     S+
Sbjct: 353 FVQNLVRNNKTGSS 366

[Close]
BLAST of Cla022881 vs. Swiss-Prot
Match: LISC2_MAIZE (Lipoyl synthase 2, chloroplastic OS=Zea mays GN=LIP1P-2 PE=2 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 2.8e-144
Identity = 244/316 (77.22%), Postives = 277/316 (87.66%), Query Frame = 1 

Query: 90  GPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGG-- 149
           GP+TGRDP VKKP WLRQRA QGEK+  +++S+  L LNTVC EAQCPNIGECWNGGG  
Sbjct: 43  GPYTGRDPEVKKPAWLRQRAAQGEKYARLRESIGELKLNTVCVEAQCPNIGECWNGGGGA 102

Query: 150 ----DGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLT 209
               DGIATATIM+LGDTCTRGCRFCAVKTS  P PPDP+EPLNTA A+ASWGVDY+VLT
Sbjct: 103 GGEGDGIATATIMVLGDTCTRGCRFCAVKTSNKPPPPDPLEPLNTALAVASWGVDYVVLT 162

Query: 210 SVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNI 269
           SVDRDD+PDGGS HFAQTVKA+KELKP I+VECLTSDFRGDL+A+ +L +SGLDV+AHNI
Sbjct: 163 SVDRDDLPDGGSSHFAQTVKALKELKPGILVECLTSDFRGDLEAISSLANSGLDVYAHNI 222

Query: 270 ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRA 329
           ETV+ LQR+VRDPRAGYDQSLAVLKHAK S+E MITKSSIMLGLGE+D+E+K+A+ DLRA
Sbjct: 223 ETVRSLQRVVRDPRAGYDQSLAVLKHAKGSREDMITKSSIMLGLGETDEEVKQAMMDLRA 282

Query: 330 IDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGEL 389
           I VDILTLGQYLQP+  HLTV+EYVTP+KF FWKEYGES+GFRYVASGPLVRSSYRAGEL
Sbjct: 283 IGVDILTLGQYLQPSERHLTVREYVTPQKFQFWKEYGESVGFRYVASGPLVRSSYRAGEL 342

Query: 390 FVQTMVRERVKSSTVN 400
           F+Q +VR     S+++
Sbjct: 343 FIQNLVRNNKTESSMD 358

[Close]
BLAST of Cla022881 vs. TrEMBL
Match: A0A0A0KPN0_CUCSA (Lipoyl synthase, chloroplastic OS=Cucumis sativus GN=LIP1P PE=3 SV=1)

HSP 1 Score: 740.7 bits (1911), Expect = 9.2e-211
Identity = 375/402 (93.28%), Postives = 384/402 (95.52%), Query Frame = 1 

Query: 1   MIHPSLSVSNPSSSS---HSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQS 60
           +IH SLS+SN SSSS   +SPLPFVKLRNFSN+S R+R SISVIRCEAL SSSSEVA QS
Sbjct: 2   IIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQS 61

Query: 61  SSSSSLPLSKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQE 120
           SSSSS      GSRV+ESQEGSSKAGPYPGGMGP+TGRDP+VKKPGWLRQRAPQGEKFQE
Sbjct: 62  SSSSS-----GGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQE 121

Query: 121 VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP 180
           VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP
Sbjct: 122 VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP 181

Query: 181 APPDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL 240
           APPDPMEPLNTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL
Sbjct: 182 APPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL 241

Query: 241 TSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM 300
           TSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM
Sbjct: 242 TSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM 301

Query: 301 ITKSSIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK 360
           ITKSSIMLGLGESDDELKEAL DLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK
Sbjct: 302 ITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK 361

Query: 361 EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTVN 400
           EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST N
Sbjct: 362 EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]
BLAST of Cla022881 vs. TrEMBL
Match: A0A068V7Y0_COFCA (Lipoyl synthase, chloroplastic OS=Coffea canephora GN=LIP1P PE=3 SV=1)

HSP 1 Score: 589.7 bits (1519), Expect = 2.6e-165
Identity = 296/400 (74.00%), Postives = 335/400 (83.75%), Query Frame = 1 

Query: 1   MIHPSLSVSNPSSSSHSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSS 60
           M+ P+  +S P ++   P      R+ SN        +SVI+CE    S S +  + ++S
Sbjct: 1   MMIPAQYLSKPPTNPSPPPLLYPSRHHSNTR------VSVIKCE----SQSPLELKPNNS 60

Query: 61  SSLPLSKVGSRVMESQEGSSKAGP---YPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQE 120
               L+K   +   +  G+   GP   YPGG+GP+TGRDP VKKP WLRQ+APQG+K+ E
Sbjct: 61  ----LNKTNFKTTTTGAGAGAVGPPPPYPGGVGPYTGRDPNVKKPEWLRQKAPQGKKYDE 120

Query: 121 VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP 180
           V+DSLSRLNL+TVCEEAQCPNIGECWNGGGDG+ATATIMLLGDTCTRGCRFCAVKTSRNP
Sbjct: 121 VRDSLSRLNLHTVCEEAQCPNIGECWNGGGDGVATATIMLLGDTCTRGCRFCAVKTSRNP 180

Query: 181 APPDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL 240
            PPDPMEP NTAKAIASWGVDYIVLTSVDRDD+PDGGSGHFA+TVKAMK LKP+IMVECL
Sbjct: 181 PPPDPMEPYNTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFAETVKAMKMLKPDIMVECL 240

Query: 241 TSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM 300
           TSDFRGDL AV  L  SGLDVFAHNIETV+RLQRIVRDPRAGY+QSL+VLKHAK +KEGM
Sbjct: 241 TSDFRGDLDAVSALARSGLDVFAHNIETVRRLQRIVRDPRAGYEQSLSVLKHAKLAKEGM 300

Query: 301 ITKSSIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK 360
           ITKSSIMLGLGE+D+ELKEA+ DLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK
Sbjct: 301 ITKSSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWK 360

Query: 361 EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST 398
           EYGESIGFRYVASGPLVRSSYRAGELFV+TMVR+R +S++
Sbjct: 361 EYGESIGFRYVASGPLVRSSYRAGELFVKTMVRDRARSTS 386

[Close]
BLAST of Cla022881 vs. TrEMBL
Match: K4DHZ1_SOLLC (Lipoyl synthase, chloroplastic OS=Solanum lycopersicum GN=LIP1P PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 1.7e-164
Identity = 294/393 (74.81%), Postives = 326/393 (82.95%), Query Frame = 1 

Query: 4   PSLSVSNPSSSSHSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSSSSL 63
           P  +  +P S S S   +  L    N S  +  +  V       SS   +  +     SL
Sbjct: 159 PEKNPISPMSCSSSSTVYFPLHKPLNKSTPFSPNSQVF------SSKGRILGRPIRCESL 218

Query: 64  PLSKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLS 123
            L        + +   S    YPGGMGP+TGRDP+VKKPGWLRQ+APQGEK++EVK++LS
Sbjct: 219 EL--------KPKSPPSNGSVYPGGMGPYTGRDPSVKKPGWLRQKAPQGEKYEEVKETLS 278

Query: 124 RLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPM 183
            L LNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPM
Sbjct: 279 GLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPM 338

Query: 184 EPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRG 243
           EP+NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFA+TVKAMK LKP+IMVECLTSDFRG
Sbjct: 339 EPVNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAETVKAMKLLKPDIMVECLTSDFRG 398

Query: 244 DLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSI 303
           DL AV TLVHSGLDVFAHN+ETVKRLQRIVRDPRAGY+QSL+VLKHAK  K+GMITK+SI
Sbjct: 399 DLSAVSTLVHSGLDVFAHNVETVKRLQRIVRDPRAGYEQSLSVLKHAKLDKKGMITKTSI 458

Query: 304 MLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESI 363
           MLGLGE+DDELKEA+ DLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK+YGESI
Sbjct: 459 MLGLGETDDELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKDYGESI 518

Query: 364 GFRYVASGPLVRSSYRAGELFVQTMVRERVKSS 397
           GFRYVASGPLVRSSYRAGELFV+TMV+E  +++
Sbjct: 519 GFRYVASGPLVRSSYRAGELFVKTMVKESARNA 537

[Close]
BLAST of Cla022881 vs. TrEMBL
Match: A0A022QUP6_ERYGU (Lipoyl synthase, chloroplastic OS=Erythranthe guttata GN=LIP1P PE=3 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 2.9e-164
Identity = 299/398 (75.13%), Postives = 327/398 (82.16%), Query Frame = 1 

Query: 1   MIHPSLSVSNPSSSSHSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSS 60
           MIH  +S + PS       PF   R   N + + +   S  RCE                
Sbjct: 1   MIHQCISKAPPS-------PFPTFRPPQNPTRKPKLLNSTARCE---------------- 60

Query: 61  SSLPLSKVGSRVMESQEGSSKAGP-YPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQEVK 120
           S L L        ES+  + + GP YPGG+GPHTGRDP  KKP WLRQ+APQGEK++EVK
Sbjct: 61  SHLEL--------ESKSAAVRVGPPYPGGVGPHTGRDPNAKKPAWLRQKAPQGEKYEEVK 120

Query: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180
           +SLSRL LNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP
Sbjct: 121 ESLSRLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180

Query: 181 PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240
           PDPMEP NTA+AIASWGVDYIVLTSVDRDD+PDGGSGHFA+TVKAMK L PEIMVECLTS
Sbjct: 181 PDPMEPYNTAEAIASWGVDYIVLTSVDRDDLPDGGSGHFAETVKAMKRLNPEIMVECLTS 240

Query: 241 DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300
           DFRGDL+AV TLV SGLDVFAHN+ETVKRLQRIVRDPRAGY+QSL+VLKHAK SKEGMIT
Sbjct: 241 DFRGDLEAVSTLVQSGLDVFAHNVETVKRLQRIVRDPRAGYEQSLSVLKHAKLSKEGMIT 300

Query: 301 KSSIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360
           KSSIMLGLGE+DDELKEA+ DLRAI VDILTLGQYLQPTPLHLTVKEYVTPEKFA WK+Y
Sbjct: 301 KSSIMLGLGETDDELKEAMVDLRAIGVDILTLGQYLQPTPLHLTVKEYVTPEKFALWKDY 360

Query: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST 398
           GESIGFRYVASGPLVRSSYRAGELFV+TMV+E  K+++
Sbjct: 361 GESIGFRYVASGPLVRSSYRAGELFVKTMVKESAKNTS 367

[Close]
BLAST of Cla022881 vs. TrEMBL
Match: A0A0V0I460_SOLCH (Lipoyl synthase, chloroplastic OS=Solanum chacoense GN=LIP1P PE=3 SV=1)

HSP 1 Score: 575.1 bits (1481), Expect = 6.7e-161
Identity = 275/308 (89.29%), Postives = 298/308 (96.75%), Query Frame = 1 

Query: 89  MGPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRLNLNTVCEEAQCPNIGECWNGGGD 148
           MGP+TGRDP+VKKPGWLRQ+APQGEK++EVK++LS L LNTVCEEAQCPNIGECWNGGGD
Sbjct: 1   MGPYTGRDPSVKKPGWLRQKAPQGEKYEEVKETLSGLKLNTVCEEAQCPNIGECWNGGGD 60

Query: 149 GIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPLNTAKAIASWGVDYIVLTSVDRD 208
           GIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEP+NTAKAIASWGVDYIVLTSVDRD
Sbjct: 61  GIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPVNTAKAIASWGVDYIVLTSVDRD 120

Query: 209 DIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKR 268
           DIPDGGSGHFA+TVKAMK LKP+IMVECLTSDFRGDL AV TLVHSGLDVFAHN+ETVKR
Sbjct: 121 DIPDGGSGHFAETVKAMKLLKPDIMVECLTSDFRGDLSAVSTLVHSGLDVFAHNVETVKR 180

Query: 269 LQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIMLGLGESDDELKEALDDLRAIDVDI 328
           LQRIVRDPRAGY+QSL+VLKHAK  K+GMITK+SIMLGLGE+DDELKEA+ DLRAIDVDI
Sbjct: 181 LQRIVRDPRAGYEQSLSVLKHAKLDKKGMITKTSIMLGLGETDDELKEAMADLRAIDVDI 240

Query: 329 LTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVQTM 388
           LTLGQYLQPTPLHLTVKEYVTPEKFAFWK+YGESIGFRYVASGPLVRSSYRAGELFV+TM
Sbjct: 241 LTLGQYLQPTPLHLTVKEYVTPEKFAFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTM 300

Query: 389 VRERVKSS 397
           V+E  +++
Sbjct: 301 VKESARNA 308

[Close]
BLAST of Cla022881 vs. NCBI nr
Match: gi|659090239|ref|XP_008445908.1| (PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo])

HSP 1 Score: 755.4 bits (1949), Expect = 5.2e-215
Identity = 381/400 (95.25%), Postives = 386/400 (96.50%), Query Frame = 1 

Query: 1   MIHPSLSVSNPS-SSSHSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSS 60
           +IH SLS+SN S SSSHSPLPFVKLRNFSN+S R+RRSISVIRCEALDSSSSEVA QSS 
Sbjct: 2   IIHSSLSISNQSPSSSHSPLPFVKLRNFSNHSLRFRRSISVIRCEALDSSSSEVAVQSSY 61

Query: 61  SSSLPLSKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQEVK 120
           SSS   S VG RVME QEGSSKAGPYPGGMGPHTGRDP+VKKPGWLRQRAPQGEKFQEVK
Sbjct: 62  SSS---SSVGGRVMEPQEGSSKAGPYPGGMGPHTGRDPSVKKPGWLRQRAPQGEKFQEVK 121

Query: 121 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 180
           DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP
Sbjct: 122 DSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAP 181

Query: 181 PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 240
           PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS
Sbjct: 182 PDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTS 241

Query: 241 DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 300
           DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT
Sbjct: 242 DFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMIT 301

Query: 301 KSSIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 360
           KSSIMLGLGESDDELKEAL DLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY
Sbjct: 302 KSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEY 361

Query: 361 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTVN 400
           GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST N
Sbjct: 362 GESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]
BLAST of Cla022881 vs. NCBI nr
Match: gi|449458724|ref|XP_004147097.1| (PREDICTED: lipoyl synthase, chloroplastic [Cucumis sativus])

HSP 1 Score: 740.7 bits (1911), Expect = 1.3e-210
Identity = 375/402 (93.28%), Postives = 384/402 (95.52%), Query Frame = 1 

Query: 1   MIHPSLSVSNPSSSS---HSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQS 60
           +IH SLS+SN SSSS   +SPLPFVKLRNFSN+S R+R SISVIRCEAL SSSSEVA QS
Sbjct: 2   IIHSSLSISNQSSSSSSSYSPLPFVKLRNFSNHSLRFRWSISVIRCEALGSSSSEVAVQS 61

Query: 61  SSSSSLPLSKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQE 120
           SSSSS      GSRV+ESQEGSSKAGPYPGGMGP+TGRDP+VKKPGWLRQRAPQGEKFQE
Sbjct: 62  SSSSS-----GGSRVVESQEGSSKAGPYPGGMGPYTGRDPSVKKPGWLRQRAPQGEKFQE 121

Query: 121 VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP 180
           VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP
Sbjct: 122 VKDSLSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP 181

Query: 181 APPDPMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL 240
           APPDPMEPLNTA AIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL
Sbjct: 182 APPDPMEPLNTATAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECL 241

Query: 241 TSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM 300
           TSDFRGDLKAVETLVHSGLDVFAHN+ETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM
Sbjct: 242 TSDFRGDLKAVETLVHSGLDVFAHNVETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGM 301

Query: 301 ITKSSIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK 360
           ITKSSIMLGLGESDDELKEAL DLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK
Sbjct: 302 ITKSSIMLGLGESDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWK 361

Query: 361 EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTVN 400
           EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSST N
Sbjct: 362 EYGESIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSSTAN 398

[Close]
BLAST of Cla022881 vs. NCBI nr
Match: gi|1021571201|ref|XP_016176754.1| (PREDICTED: lipoyl synthase 1, chloroplastic [Arachis ipaensis])

HSP 1 Score: 610.1 bits (1572), Expect = 2.7e-171
Identity = 310/391 (79.28%), Postives = 337/391 (86.19%), Query Frame = 1 

Query: 7   SVSNPSSSSHS-PLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSSSSLPL 66
           S+ N SS S S PLP    +     +P        IRC+A DSS S       S +S+P 
Sbjct: 5   SLFNRSSISFSAPLPTTSRKRCGFLNP--------IRCDATDSSLSP------SPASIPA 64

Query: 67  SKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRL 126
                ++MES+    K+G YPGG+GP+TGRDP VKKP WLRQRAPQGE+FQE+K+SLS L
Sbjct: 65  PP---KLMESER---KSGSYPGGLGPYTGRDPNVKKPLWLRQRAPQGERFQEIKESLSHL 124

Query: 127 NLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEP 186
            LNTVCEEAQCPNIGECWNGGGDGIATATIM+LGDTCTRGCRFCAVKTSRNPAPPDPMEP
Sbjct: 125 KLNTVCEEAQCPNIGECWNGGGDGIATATIMVLGDTCTRGCRFCAVKTSRNPAPPDPMEP 184

Query: 187 LNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDL 246
            NTAKA+ASWGVDYIVLTSVDRDD+PDGGSGHFAQTVKAMK LKPEIMVECLTSDFRGDL
Sbjct: 185 ENTAKAVASWGVDYIVLTSVDRDDLPDGGSGHFAQTVKAMKNLKPEIMVECLTSDFRGDL 244

Query: 247 KAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIML 306
           KAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGY+QSL+VLKHAKHSKEGMITK+SIML
Sbjct: 245 KAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVLKHAKHSKEGMITKTSIML 304

Query: 307 GLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGF 366
           GLGE+D E+KE + DLRAIDVDILT GQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGF
Sbjct: 305 GLGETDHEVKEVMADLRAIDVDILTFGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGF 364

Query: 367 RYVASGPLVRSSYRAGELFVQTMVRERVKSS 397
           RYVASGPLVRSSYRAGELFVQTMVRE+ K++
Sbjct: 365 RYVASGPLVRSSYRAGELFVQTMVREKAKTA 375

[Close]
BLAST of Cla022881 vs. NCBI nr
Match: gi|1012245645|ref|XP_015942135.1| (PREDICTED: lipoyl synthase 1, chloroplastic [Arachis duranensis])

HSP 1 Score: 608.6 bits (1568), Expect = 7.8e-171
Identity = 309/391 (79.03%), Postives = 336/391 (85.93%), Query Frame = 1 

Query: 7   SVSNPSSSSHS-PLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSSSSLPL 66
           S+ N SS S S PLP    +     +P        IRC+A DSS S       S +S+P 
Sbjct: 5   SLFNRSSISFSAPLPTTSRKRCGFLNP--------IRCDATDSSLSP------SPASIPA 64

Query: 67  SKVGSRVMESQEGSSKAGPYPGGMGPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDSLSRL 126
                ++MES+    K+G YPGG+GP+TGRDP VKKP WLRQRAPQGE+FQE+K+SLS L
Sbjct: 65  PP---KLMESER---KSGSYPGGLGPYTGRDPNVKKPLWLRQRAPQGERFQEIKESLSHL 124

Query: 127 NLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEP 186
            LNTVCEEAQCPNIGECWNGGGDGIATATIM+LGDTCTRGCRFCAVKTSRNPAPPDPMEP
Sbjct: 125 KLNTVCEEAQCPNIGECWNGGGDGIATATIMVLGDTCTRGCRFCAVKTSRNPAPPDPMEP 184

Query: 187 LNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDL 246
            NTAKA+ASWGVDYIVLTSVDRDD+PDGGSGHFAQTVKAMK LKPEIMVECLTSDFRGDL
Sbjct: 185 ENTAKAVASWGVDYIVLTSVDRDDLPDGGSGHFAQTVKAMKNLKPEIMVECLTSDFRGDL 244

Query: 247 KAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKSSIML 306
           KAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGY+QSL+VLKHAKHSKEGMITK+SIML
Sbjct: 245 KAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVLKHAKHSKEGMITKTSIML 304

Query: 307 GLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGESIGF 366
           GLGE+D E+KE + DLRAIDVDILT GQYLQPTPLHLTVKEYVTPEKF FWKEYGESIGF
Sbjct: 305 GLGETDHEVKEVMADLRAIDVDILTFGQYLQPTPLHLTVKEYVTPEKFTFWKEYGESIGF 364

Query: 367 RYVASGPLVRSSYRAGELFVQTMVRERVKSS 397
           RYVASGPLVRSSYRAGELFVQTMVRE+ K++
Sbjct: 365 RYVASGPLVRSSYRAGELFVQTMVREKAKTA 375

[Close]
BLAST of Cla022881 vs. NCBI nr
Match: gi|590689254|ref|XP_007043176.1| (Radical SAM superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 605.9 bits (1561), Expect = 5.1e-170
Identity = 310/395 (78.48%), Postives = 339/395 (85.82%), Query Frame = 1 

Query: 5   SLSVSNPSSSSHSPLPFVKLRNFSNNSPRYRRSISVIRCEALDSSSSEVAAQSSSSSSLP 64
           S+S+S PS S+  P+P         + P +  S   IRCE+ DS+S     +   +S   
Sbjct: 2   SVSMSKPSISASIPIP-------KPSKPSWSYSQVKIRCESSDSASKIDVKRPQPTS--- 61

Query: 65  LSKVGSRVMESQEGSSKAGPYPGGM---GPHTGRDPTVKKPGWLRQRAPQGEKFQEVKDS 124
           LS  G ++MES    +K GPYPGGM   GP TGRDP VKKP WLRQ+APQG++F +VK S
Sbjct: 62  LSAAG-KLMESD---AKNGPYPGGMPKMGPFTGRDPNVKKPEWLRQKAPQGQRFDDVKQS 121

Query: 125 LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD 184
           LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD
Sbjct: 122 LSRLNLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPAPPD 181

Query: 185 PMEPLNTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDF 244
           PMEP NTAKAIASWGVDYIVLTSVDRDD+PDGGSGHFAQTV+ MK+LKPEIMVECLTSDF
Sbjct: 182 PMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFAQTVQVMKKLKPEIMVECLTSDF 241

Query: 245 RGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYDQSLAVLKHAKHSKEGMITKS 304
           RGDLKAV+ LVHSGLDVFAHNIETVKRLQRIVRDPRAGY+QSL+VL+HAK SKEGMITKS
Sbjct: 242 RGDLKAVDILVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVLRHAKLSKEGMITKS 301

Query: 305 SIMLGLGESDDELKEALDDLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE 364
           SIMLGLGE+DDELKEAL DLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE
Sbjct: 302 SIMLGLGETDDELKEALADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFAFWKEYGE 361

Query: 365 SIGFRYVASGPLVRSSYRAGELFVQTMVRERVKSS 397
            IGFRYVASGPLVRSSYRAGELFV+TMV+ER  ++
Sbjct: 362 LIGFRYVASGPLVRSSYRAGELFVKTMVKERANNT 382

The following BLAST results are available for this feature:
BLAST of Cla022881 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LISC1_ORYSJ5.1e-14673.18Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=LIP1P-1 PE=3... [more]
LISC1_ORYSI5.1e-14673.18Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp. indica GN=LIP1P-1 PE=3 S... [more]
LISC1_MAIZE5.6e-14578.66Lipoyl synthase 1, chloroplastic OS=Zea mays GN=LIP1P-1 PE=2 SV=1[more]
LISC_SORBI7.3e-14578.66Lipoyl synthase, chloroplastic OS=Sorghum bicolor GN=LIP1P PE=3 SV=1[more]
LISC2_MAIZE2.8e-14477.22Lipoyl synthase 2, chloroplastic OS=Zea mays GN=LIP1P-2 PE=2 SV=1[more]
BLAST of Cla022881 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KPN0_CUCSA9.2e-21193.28Lipoyl synthase, chloroplastic OS=Cucumis sativus GN=LIP1P PE=3 SV=1[more]
A0A068V7Y0_COFCA2.6e-16574.00Lipoyl synthase, chloroplastic OS=Coffea canephora GN=LIP1P PE=3 SV=1[more]
K4DHZ1_SOLLC1.7e-16474.81Lipoyl synthase, chloroplastic OS=Solanum lycopersicum GN=LIP1P PE=3 SV=1[more]
A0A022QUP6_ERYGU2.9e-16475.13Lipoyl synthase, chloroplastic OS=Erythranthe guttata GN=LIP1P PE=3 SV=1[more]
A0A0V0I460_SOLCH6.7e-16189.29Lipoyl synthase, chloroplastic OS=Solanum chacoense GN=LIP1P PE=3 SV=1[more]
BLAST of Cla022881 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090239|ref|XP_008445908.1|5.2e-21595.25PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo][more]
gi|449458724|ref|XP_004147097.1|1.3e-21093.28PREDICTED: lipoyl synthase, chloroplastic [Cucumis sativus][more]
gi|1021571201|ref|XP_016176754.1|2.7e-17179.28PREDICTED: lipoyl synthase 1, chloroplastic [Arachis ipaensis][more]
gi|1012245645|ref|XP_015942135.1|7.8e-17179.03PREDICTED: lipoyl synthase 1, chloroplastic [Arachis duranensis][more]
gi|590689254|ref|XP_007043176.1|5.1e-17078.48Radical SAM superfamily protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003698Lipoyl_synth
IPR006638Elp3/MiaB/NifB
IPR007197rSAM
IPR013785Aldolase_TIM
IPR027526Lipoyl_synth_chlpt
Vocabulary: Molecular Function
TermDefinition
GO:00515394 iron, 4 sulfur cluster binding
GO:0016992lipoate synthase activity
GO:0003824catalytic activity
GO:0051536iron-sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0009107lipoate biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0009507chloroplast
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009107 lipoate biosynthetic process
biological_process GO:0009249 protein lipoylation
cellular_component GO:0009507 chloroplast
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0051536 iron-sulfur cluster binding
molecular_function GO:0016783 sulfurtransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022881Cla022881.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003698Lipoyl synthaseHAMAPMF_00206Lipoyl_synthcoord: 100..392
score: 135
IPR003698Lipoyl synthasePANTHERPTHR10949LIPOYL SYNTHASEcoord: 26..392
score: 5.3E
IPR003698Lipoyl synthaseTIGRFAMsTIGR00510TIGR00510coord: 95..391
score: 1.5E
IPR006638Elongator protein 3/MiaB/NifBSMARTSM00729MiaBcoord: 152..361
score: 4.6
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 160..321
score: 2.3
IPR013785Aldolase-type TIM barrelGENE3DG3DSA:3.20.20.70coord: 115..383
score: 4.2
IPR027526Lipoyl synthase, chloroplasticHAMAPMF_03129Lipoyl_synth_plantCcoord: 36..398
score: 60
NoneNo IPR availablePANTHERPTHR10949:SF12LIPOYL SYNTHASE, CHLOROPLASTICcoord: 26..392
score: 5.3E
NoneNo IPR availableunknownSSF102114Radical SAM enzymescoord: 112..390
score: 4.58