Cla022738 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022738
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Eukaryotic initiation factor 4B (AHRD V1 ***- Q9M7E8_ARATH); contains Interpro domain(s) IPR010433 Plant specific eukaryotic initiation factor 4B
Location	Chr8 : 26090533 .. 26091015 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTTAGGATTTGTTTGTCATTTTGTTCCTCTTTGTTGA

mRNA sequence

ATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTTAGGATTTGTTTGTCATTTTGTTCCTCTTTGTTGA

Coding sequence (CDS)

ATGTTGAAAGAGGAAATTGATGTCCTAAGGAAGGAACTTGAGGAAGGTTTATCTCTGAATGCTAACAAAGAATCGGCGCAAGAATCTGCAGGAGAGATGCAAAATCTGCGCGACAGAATTAATAAAAAAGAACGTGAACTGGAGACGCTGATCCTTGATTTGGATGATAAAGTTCGCTTTGGGAAGAAAGCCACTGAAAGACCTGGCTCTGGAGCAGGCAGGGCTGCTGTCTTTCCAGAAAGGCCTGGCTCTGGAGCAGGTAGGGCCGCTGTCTTTCCAGAAAGACCGCCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGACCTCGATCACGTGGCACTGCAGATGTATGGAGTAGACCCACTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACGTGGAGAGGTTAGGATTTGTTTGTCATTTTGTTCCTCTTTGTTGA

Protein sequence

MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDVERLGFVCHFVPLC

Homology

[Close]

BLAST of Cla022738 vs. Swiss-Prot
Match: IF4B2_ARATH (Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana GN=EIF4B2 PE=1 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.6e-32
Identity = 77/150 (51.33%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNA-NKESAQESAGEMQNLRDRINKKERELETLILDLDDKVR 60
           MLKEEI+ LRK+LE+  ++   +KES QES    QNL D I +KE+ L+ LI +LDDKVR
Sbjct: 405 MLKEEIEELRKKLEKEAAIAPESKESQQESDSNHQNLPDLIREKEKNLDLLIRELDDKVR 464

Query: 61  FGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGT 120
           F  +A ERPGS A R   + ERP S A             GS DESRS ES++RPRS GT
Sbjct: 465 FRPRAVERPGSSASRGGSYSERPHSRA-------------GSIDESRSVESMERPRSHGT 524

Query: 121 ADVWSRPTDDRKPIQGARDRGFLGNRDVER 150
            D W RP DDR+  QG+++RGF  NR+ +R
Sbjct: 525 GDNWPRPVDDRRNFQGSKERGFFNNRNFDR 541

[Close]

BLAST of Cla022738 vs. Swiss-Prot
Match: IF4B1_ARATH (Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana GN=EIF4B1 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-27
Identity = 74/155 (47.74%), Postives = 90/155 (58.06%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQE--SAGEMQNLRDRINKKERELETLILDLDDKV 60
           MLKEEI+ LRK+LE+       KES QE  S     +L + I  KE++LE L  +LDDKV
Sbjct: 391 MLKEEIEELRKKLEKESVAPEIKESDQEPGSNNNHNDLPEIIRGKEKDLEILTRELDDKV 450

Query: 61  RFGKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRG 120
           RF +K  ERPGSGAGR   + ER  S A             GS DE+RSFES +RPRSRG
Sbjct: 451 RFRQKPVERPGSGAGRTGTYSERTHSRA-------------GSIDETRSFESTERPRSRG 510

Query: 121 TADVWSRPTDD-RKPIQGARDRGFLGNRDVERLGF 153
             D W RP ++ R+  QG ++RGF  NR   R G+
Sbjct: 511 AVDAWVRPANEQRRNFQGTKERGFFSNRSSSREGW 532

[Close]

BLAST of Cla022738 vs. Swiss-Prot
Match: IF4B1_WHEAT (Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum GN=EIF4B PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.1e-14
Identity = 52/142 (36.62%), Postives = 76/142 (53.52%), Query Frame = 1


Query: 2   LKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFG 61
           LKEEI++L+ +L+E   + A      E A E+    ++I++ E++L+ L ++LDDK+RFG
Sbjct: 401 LKEEINLLKVDLKE---IEAIAGDGSEQAKEVS---EKISQMEKQLDLLTVELDDKIRFG 460

Query: 62  KKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTAD 121
               +RP SGAGRAA FP  P S     AV                   +DRPRSRG  +
Sbjct: 461 ----QRPSSGAGRAAAFP--PASEEPHVAV-----------------AHMDRPRSRGGVE 513

Query: 122 VWSRPTDDRKPIQGARDRGFLG 144
            + +P ++R    G+R+RG  G
Sbjct: 521 TYPKPVEERWGFHGSRERGSFG 513

[Close]

BLAST of Cla022738 vs. TrEMBL
Match: A0A0A0LKJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G349620 PE=4 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.0e-75
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           MLKEEIDVLRKELEEGLSLNANKES QESAGEMQNLRDRINKKE ELETL+LDLDDKVRF
Sbjct: 378 MLKEEIDVLRKELEEGLSLNANKESVQESAGEMQNLRDRINKKEHELETLVLDLDDKVRF 437

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTA 120
           GKKATERPGSGAGRAAVFPERPGSGAGRA VFPERPPSQGSFDESRSFES+DRPRSRGTA
Sbjct: 438 GKKATERPGSGAGRAAVFPERPGSGAGRATVFPERPPSQGSFDESRSFESVDRPRSRGTA 497

Query: 121 DVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           DVWSRP DDRKPIQGARDRGFLGNRD+ER
Sbjct: 498 DVWSRPADDRKPIQGARDRGFLGNRDMER 526

[Close]

BLAST of Cla022738 vs. TrEMBL
Match: M5XNB9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003820mg PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.5e-42
Identity = 94/149 (63.09%), Postives = 110/149 (73.83%), Query Frame = 1


Query: 2   LKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFG 61
           LKEEID L+KELE+      N E+ QES G+  +LRD + +KERELETLI DLDDKVRFG
Sbjct: 391 LKEEIDHLKKELEKESPDKTNSETGQESGGDQASLRDIVLQKERELETLIHDLDDKVRFG 450

Query: 62  KKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQ-GSFDESRSFESIDRPRSRGTA 121
           +KA +RPGSGAGR      RPGSGAGRA  F +R PSQ GSF++SRS E IDRP S G  
Sbjct: 451 QKAIDRPGSGAGRPGSGAGRPGSGAGRAGSFLDRTPSQSGSFEDSRSTEFIDRPHSHGKG 510

Query: 122 DVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           D W+RP DDR+  QG R+RGFLGNRD+ R
Sbjct: 511 DAWTRPFDDRRSFQGGRERGFLGNRDMGR 539

[Close]

BLAST of Cla022738 vs. TrEMBL
Match: W9RCN6_9ROSA (GDSL esterase/lipase OS=Morus notabilis GN=L484_027679 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.2e-36
Identity = 83/150 (55.33%), Postives = 107/150 (71.33%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           MLKEEI+ L+KELE+      + ES+QESAG+  +LRD + ++ERE E LI DLDDKVRF
Sbjct: 333 MLKEEIEYLKKELEK-----ESTESSQESAGDQPSLRDTLLQREREFEKLIRDLDDKVRF 392

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTA 120
           G+KA ERPGSGAGR+  + ERP             P   G F+ES+S E ++RPRSRGT 
Sbjct: 393 GQKAVERPGSGAGRSGNYLERP-------------PSQSGPFEESKSIEFMERPRSRGTG 452

Query: 121 DVWSRPTDDRKPIQGARDRGFLGNRDVERL 151
           D+W+RP DDR+  QG R+RGFLG+RD++RL
Sbjct: 453 DLWTRPADDRRGFQGGRERGFLGSRDLDRL 464

[Close]

BLAST of Cla022738 vs. TrEMBL
Match: B9HLP7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s18930g PE=4 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 4.6e-36
Identity = 81/149 (54.36%), Postives = 104/149 (69.80%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           +LKEEI+ L+K LE+ L+   N+E  + SA ++ +LR+ I++KERELE L+ DLDDKVRF
Sbjct: 393 LLKEEIEHLKKGLEKELTTKGNQEPPRGSADDIPSLREMISEKERELEMLVRDLDDKVRF 452

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTA 120
           G KA ERPGSGAGRA+ F ERP             P   G FDESR+ E +DRPRSRG  
Sbjct: 453 GSKANERPGSGAGRASGFSERP-------------PSRSGLFDESRNMELMDRPRSRGKP 512

Query: 121 DVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           D+W+RP DDR+  QG R+RGFLG+ D +R
Sbjct: 513 DIWTRPVDDRRAFQGGRERGFLGSGDFDR 528

[Close]

BLAST of Cla022738 vs. TrEMBL
Match: F6GVM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00690 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.6e-36
Identity = 84/149 (56.38%), Postives = 101/149 (67.79%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           +LKEEI+ L+KEL+  L    N E+A  S G   +LRD I  KE++LE LI DLDDKVRF
Sbjct: 383 LLKEEIEQLKKELQNELG---NSEAALASGGAQTSLRDEIASKEKDLEQLIRDLDDKVRF 442

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTA 120
           G+KA ERPGS AGR AVFPERP             P   GS +E R+ E ++RPRSRGT 
Sbjct: 443 GQKAIERPGSAAGRVAVFPERP-------------PSQSGSVEEFRNTEFMERPRSRGTG 502

Query: 121 DVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           D+W+RP DDR+  QG RDRGFLGNRD+ R
Sbjct: 503 DLWTRPVDDRRAFQGGRDRGFLGNRDLGR 515

[Close]

BLAST of Cla022738 vs. NCBI nr
Match: gi|778670574|ref|XP_011649497.1| (PREDICTED: uncharacterized protein LOC101206526 [Cucumis sativus])

HSP 1 Score: 288.5 bits (737), Expect = 7.2e-75
Identity = 142/149 (95.30%), Postives = 145/149 (97.32%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           MLKEEIDVLRKELEEGLSLNANKES QESAGEMQNLRDRINKKE ELETL+LDLDDKVRF
Sbjct: 378 MLKEEIDVLRKELEEGLSLNANKESVQESAGEMQNLRDRINKKEHELETLVLDLDDKVRF 437

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTA 120
           GKKATERPGSGAGRAAVFPERPGSGAGRA VFPERPPSQGSFDESRSFES+DRPRSRGTA
Sbjct: 438 GKKATERPGSGAGRAAVFPERPGSGAGRATVFPERPPSQGSFDESRSFESVDRPRSRGTA 497

Query: 121 DVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           DVWSRP DDRKPIQGARDRGFLGNRD+ER
Sbjct: 498 DVWSRPADDRKPIQGARDRGFLGNRDMER 526

[Close]

BLAST of Cla022738 vs. NCBI nr
Match: gi|659087302|ref|XP_008444378.1| (PREDICTED: uncharacterized protein LOC103487724 isoform X2 [Cucumis melo])

HSP 1 Score: 275.4 bits (703), Expect = 6.3e-71
Identity = 141/163 (86.50%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           MLKEEIDVLRKELEEGLSLNANKES QESAGEMQNLR+RINKKE ELETLILDLDDKVRF
Sbjct: 382 MLKEEIDVLRKELEEGLSLNANKESVQESAGEMQNLRERINKKEHELETLILDLDDKVRF 441

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAA--------------VFPERPPSQGSFDESR 120
           GKKAT+RPGSGAGRAAVFPERPGSGAGRAA              VFPERPPSQGSFDESR
Sbjct: 442 GKKATDRPGSGAGRAAVFPERPGSGAGRAAVFPERPGSGAGRATVFPERPPSQGSFDESR 501

Query: 121 SFESIDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           SFES+DRPRSRGTADVWSRP DDRKPIQGARD GFLGNRD+ER
Sbjct: 502 SFESVDRPRSRGTADVWSRPADDRKPIQGARDGGFLGNRDMER 544

[Close]

BLAST of Cla022738 vs. NCBI nr
Match: gi|659087300|ref|XP_008444377.1| (PREDICTED: uncharacterized protein LOC103487724 isoform X1 [Cucumis melo])

HSP 1 Score: 269.6 bits (688), Expect = 3.4e-69
Identity = 141/177 (79.66%), Postives = 144/177 (81.36%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           MLKEEIDVLRKELEEGLSLNANKES QESAGEMQNLR+RINKKE ELETLILDLDDKVRF
Sbjct: 382 MLKEEIDVLRKELEEGLSLNANKESVQESAGEMQNLRERINKKEHELETLILDLDDKVRF 441

Query: 61  GKKAT----------------------------ERPGSGAGRAAVFPERPGSGAGRAAVF 120
           GKKAT                            ERPGSGAGRAAVFPERPGSGAGRA VF
Sbjct: 442 GKKATDRPGSGAGRAAVFPERPGSGAGRAAVFPERPGSGAGRAAVFPERPGSGAGRATVF 501

Query: 121 PERPPSQGSFDESRSFESIDRPRSRGTADVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           PERPPSQGSFDESRSFES+DRPRSRGTADVWSRP DDRKPIQGARD GFLGNRD+ER
Sbjct: 502 PERPPSQGSFDESRSFESVDRPRSRGTADVWSRPADDRKPIQGARDGGFLGNRDMER 558

[Close]

BLAST of Cla022738 vs. NCBI nr
Match: gi|596287485|ref|XP_007225782.1| (hypothetical protein PRUPE_ppa003820mg [Prunus persica])

HSP 1 Score: 180.6 bits (457), Expect = 2.1e-42
Identity = 94/149 (63.09%), Postives = 110/149 (73.83%), Query Frame = 1


Query: 2   LKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRFG 61
           LKEEID L+KELE+      N E+ QES G+  +LRD + +KERELETLI DLDDKVRFG
Sbjct: 391 LKEEIDHLKKELEKESPDKTNSETGQESGGDQASLRDIVLQKERELETLIHDLDDKVRFG 450

Query: 62  KKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQ-GSFDESRSFESIDRPRSRGTA 121
           +KA +RPGSGAGR      RPGSGAGRA  F +R PSQ GSF++SRS E IDRP S G  
Sbjct: 451 QKAIDRPGSGAGRPGSGAGRPGSGAGRAGSFLDRTPSQSGSFEDSRSTEFIDRPHSHGKG 510

Query: 122 DVWSRPTDDRKPIQGARDRGFLGNRDVER 150
           D W+RP DDR+  QG R+RGFLGNRD+ R
Sbjct: 511 DAWTRPFDDRRSFQGGRERGFLGNRDMGR 539

[Close]

BLAST of Cla022738 vs. NCBI nr
Match: gi|743872115|ref|XP_011034049.1| (PREDICTED: uncharacterized protein LOC105132322 isoform X2 [Populus euphratica])

HSP 1 Score: 167.5 bits (423), Expect = 1.8e-38
Identity = 85/150 (56.67%), Postives = 108/150 (72.00%), Query Frame = 1


Query: 1   MLKEEIDVLRKELEEGLSLNANKESAQESAGEMQNLRDRINKKERELETLILDLDDKVRF 60
           +LKEEI+ L+K LE+ L+   N+ES + SA  + +LR+ I++KER+LE L+LDLDDKVRF
Sbjct: 387 LLKEEIEHLKKGLEKELTTKGNQESPRGSADNIPSLREMISEKERDLEILVLDLDDKVRF 446

Query: 61  GKKATERPGSGAGRAAVFPERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTA 120
           G KA ERPGSGAGRA+ F ERP             P   GSFDESR+ E +DRPRSRG  
Sbjct: 447 GSKAIERPGSGAGRASGFSERP-------------PSRSGSFDESRNMELMDRPRSRGKP 506

Query: 121 DVWSRPTDDRKPIQGARDRGFLGNRDVERL 151
           D+W+RP DDR+  QG R+RGFLG+RD +RL
Sbjct: 507 DIWTRPVDDRRAFQGGRERGFLGSRDFDRL 523

The following BLAST results are available for this feature:

BLAST of Cla022738 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IF4B2_ARATH	2.6e-32	51.33	Eukaryotic translation initiation factor 4B2 OS=Arabidopsis thaliana GN=EIF4B2 P...	[more]
IF4B1_ARATH	2.5e-27	47.74	Eukaryotic translation initiation factor 4B1 OS=Arabidopsis thaliana GN=EIF4B1 P...	[more]
IF4B1_WHEAT	4.1e-14	36.62	Eukaryotic translation initiation factor 4B1 OS=Triticum aestivum GN=EIF4B PE=1 ...	[more]

BLAST of Cla022738 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKJ9_CUCSA	5.0e-75	95.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G349620 PE=4 SV=1	[more]
M5XNB9_PRUPE	1.5e-42	63.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003820mg PE=4 SV=1	[more]
W9RCN6_9ROSA	1.2e-36	55.33	GDSL esterase/lipase OS=Morus notabilis GN=L484_027679 PE=4 SV=1	[more]
B9HLP7_POPTR	4.6e-36	54.36	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s18930g PE=4 SV=2	[more]
F6GVM2_VITVI	4.6e-36	56.38	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00690 PE=4 SV=...	[more]

BLAST of Cla022738 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670574\|ref\|XP_011649497.1\|	7.2e-75	95.30	PREDICTED: uncharacterized protein LOC101206526 [Cucumis sativus]	[more]
gi\|659087302\|ref\|XP_008444378.1\|	6.3e-71	86.50	PREDICTED: uncharacterized protein LOC103487724 isoform X2 [Cucumis melo]	[more]
gi\|659087300\|ref\|XP_008444377.1\|	3.4e-69	79.66	PREDICTED: uncharacterized protein LOC103487724 isoform X1 [Cucumis melo]	[more]
gi\|596287485\|ref\|XP_007225782.1\|	2.1e-42	63.09	hypothetical protein PRUPE_ppa003820mg [Prunus persica]	[more]
gi\|743872115\|ref\|XP_011034049.1\|	1.8e-38	56.67	PREDICTED: uncharacterized protein LOC105132322 isoform X2 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010433	EIF-4B_pln

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU29747	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU48994	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022738	Cla022738.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU48994	WMU48994	transcribed_cluster
WMU29747	WMU29747	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010433	Plant specific eukaryotic initiation factor 4B	PFAM	PF06273	eIF-4B	coord: 1..82 score: 5.1E-26coord: 80..140 score: 3.9
None	No IPR available	unknown	Coil	Coil	coord: 26..53 scor
None	No IPR available	PANTHER	PTHR32091	FAMILY NOT NAMED	coord: 1..16 score: 3.0E-32coord: 44..152 score: 3.0
None	No IPR available	PANTHER	PTHR32091:SF0	EUKARYOTIC INITIATION FACTOR 4B-RELATED	coord: 1..16 score: 3.0E-32coord: 44..152 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla022738	Melon (DHL92) v3.6.1	medwmB049
Cla022738	Melon (DHL92) v3.6.1	medwmB295
Cla022738	Silver-seed gourd	carwmB0230
Cla022738	Silver-seed gourd	carwmB0500
Cla022738	Silver-seed gourd	carwmB0621
Cla022738	Cucumber (Chinese Long) v3	cucwmB124
Cla022738	Cucumber (Chinese Long) v3	cucwmB399
Cla022738	Watermelon (97103) v2	wmwmbB100
Cla022738	Watermelon (97103) v2	wmwmbB095
Cla022738	Wax gourd	wgowmB316
Cla022738	Watermelon (97103) v1	wmwmB063
Cla022738	Cucumber (Gy14) v1	cgywmB706
Cla022738	Cucurbita maxima (Rimu)	cmawmB154
Cla022738	Cucurbita maxima (Rimu)	cmawmB364
Cla022738	Cucurbita maxima (Rimu)	cmawmB670
Cla022738	Cucurbita maxima (Rimu)	cmawmB753
Cla022738	Cucurbita moschata (Rifu)	cmowmB139
Cla022738	Cucurbita moschata (Rifu)	cmowmB666
Cla022738	Cucurbita moschata (Rifu)	cmowmB748
Cla022738	Wild cucumber (PI 183967)	cpiwmB116
Cla022738	Wild cucumber (PI 183967)	cpiwmB382
Cla022738	Melon (DHL92) v3.5.1	mewmB048
Cla022738	Melon (DHL92) v3.5.1	mewmB300
Cla022738	Watermelon (Charleston Gray)	wcgwmB278
Cla022738	Watermelon (Charleston Gray)	wcgwmB400
Cla022738	Cucumber (Chinese Long) v2	cuwmB111
Cla022738	Cucumber (Chinese Long) v2	cuwmB376
Cla022738	Cucurbita pepo (Zucchini)	cpewmB022
Cla022738	Cucurbita pepo (Zucchini)	cpewmB101
Cla022738	Cucurbita pepo (Zucchini)	cpewmB397
Cla022738	Cucurbita pepo (Zucchini)	cpewmB789
Cla022738	Bottle gourd (USVL1VR-Ls)	lsiwmB296
Cla022738	Bottle gourd (USVL1VR-Ls)	lsiwmB465
Cla022738	Cucumber (Gy14) v2	cgybwmB108
Cla022738	Cucumber (Gy14) v2	cgybwmB349