Cla022702 (gene) Watermelon (97103) v1

Overview
NameCla022702
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionDNA-binding protein (Fragment) (AHRD V1 *--- Q42051_ARATH); contains Interpro domain(s) IPR005516 Remorin, C-terminal region
LocationChr8 : 25853608 .. 25855546 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGGGGAGAGAGGAGAATGGGTATGACAACAATGGATCAAAGCATGAAAAGGCTATGGGTTTTGAGTTTCATAGAGGAAATGGAGTTAATGGCAGTTTTCATCGCCGGGTGGTCACTGCTAAATCAACTCCATCGAAGTGGGACGATGCACAGAAATGGATTTTTGGGTTGCCAAGAGGAGGAGAAAAAGGGGAGTCTAAAATCAAGCATAGAAATTCGAATGCTGATGACTTGCGGCTTATAGCTGCTGTGCCACAACAGGAGCATGAATATTTGAGCGGTGGAGATAAAAGGATCGAAGGGCAAGAAGAAAATGGAGGATTTGCTTCTGCTATGAGTAGTCGAAGTGAAGCAGAAACAAAGAAGATGGAATGTGATGAGCCCATTTGGAGAATCAATAAGCCAGTGGAGAGCTGCAAGACGGTGGTTAGATCTGTGTGTGTGAGAGACATGGGAACAGAGATGACTCCCATAGCGAGTCAGGAGCCTTCAAGGACGGCTACCCCAGTTAGAGCCACAACCCCTGTGCTTCAGAGCCCTATAACTTCTGGATCTTCCACTCCAGCAAGGCCTCACCATGAGATGCAAGCCATTGAAGATCGTCAAGCAGGTTTTGCTTCTACCGCTATGGTGGTGAGAAACCAAAGCTCTGATCAGACTCTAAAGATGGACTCTATGGAAACTAGAGCAATGGCTTGGGATGAAGCAGAGCGAGCCAAGCATATGGCAAGGTGATCCCTTGATCCCTTTTCCTTACTTCTCTAGTTTTGTTTTTGCCTTTCAAATTCTGAACAGTGAACACTTTGGCCCGATCGATAACTTCTGTTTTATTTTTGAAGTTCAAGAAACTAGTTGTATGTTTTCAAAGCATCCAATTTTGTGGGCCTTTTTCGTCTTTTCATTAGACAAAAAGGGAAAAAAAGGAGGGTACCAGACTCATCCTTTCAGACTGGAAACCTGATGATTGAATGTCTTCTCCCCCTTTGCAATCTGGAGAACTTAAAATGCTAGATTTAACTTGGATGTTCATGATATGCTGATCGTTTTGCATTTTTAGGTATAAACGTGAAGAAGTGAAGATACAAGCATGGGAAACCAGCGAGAAGAGGAAAGCGGAGTCAAAAATGAGAAAAATAGAGGTACTCTCTTAGCCTGATTTTTACCTTCTTCCAAACTTGAATGTGCAGTTGAACTTTGATCCAAATCTGTTCTTTTATTATATTATAGTTTCTGTAGTTTGGCTAGATCTCCTAAATCGTATCTGTCATCAGTTTTCTTCCATGGCACCTTTTCTTTTGATGTTTCAAAAAAAGAAATGGAAATATTGGATTTGAAAGGGTTCTGTAAAGCTCACCCGTCTTATGCCCAGCTCGATTTTGTCGCCCAATTTTCTCTTTTTTATCCAGCTCAAATCGTAATACAATTGTTCATATAATATATTAGCCTATCCAAGGTAAAAAATTTATCAACATCTAATATCGAGAAACATTTTAAAATATTATTTAACCAACCCAATAAAACTATAACATAACATTTAAAATCACGAGGATCAAATTAAGAAATAAGACTAAACTCGAATTAATAGCATTCTAACCGCCCATCTTTTCTGCAAATGGATTCACTTCCTTGAAGTCGTAGTAGTGAACATGAAATCTATAACAACTTTGAACATTGGATCCAATGAACAGTTCTTTTAACTTTTTTTAAAAAATTATATGAGCAGAAAAAGGCAGAGAAAATGAAAGCTGGTGCACAAGAGACGCTGGCAGATAAACTAGCAGCGACGAGAAGAATAGCCGAAGAGAAACGTGCAAATGCAGAGGCAAAACTAAATAAGAAATCTGTAAGGACTTCTGAAAAGGCTGATTATATTAGGAGGACTGGTCACTTACCTTCTTCTTTCTCCTTCAAGTTGCCTTCTCTATGCTGCTGGTAG

mRNA sequence

ATGAGGGGGAGAGAGGAGAATGGGTATGACAACAATGGATCAAAGCATGAAAAGGCTATGGGTTTTGAGTTTCATAGAGGAAATGGAGTTAATGGCAGTTTTCATCGCCGGGTGGTCACTGCTAAATCAACTCCATCGAAGTGGGACGATGCACAGAAATGGATTTTTGGGTTGCCAAGAGGAGGAGAAAAAGGGGAGTCTAAAATCAAGCATAGAAATTCGAATGCTGATGACTTGCGGCTTATAGCTGCTGTGCCACAACAGGAGCATGAATATTTGAGCGGTGGAGATAAAAGGATCGAAGGGCAAGAAGAAAATGGAGGATTTGCTTCTGCTATGAGTAGTCGAAGTGAAGCAGAAACAAAGAAGATGGAATGTGATGAGCCCATTTGGAGAATCAATAAGCCAGTGGAGAGCTGCAAGACGGTGGTTAGATCTGTGTGTGTGAGAGACATGGGAACAGAGATGACTCCCATAGCGAGTCAGGAGCCTTCAAGGACGGCTACCCCAGTTAGAGCCACAACCCCTGTGCTTCAGAGCCCTATAACTTCTGGATCTTCCACTCCAGCAAGGCCTCACCATGAGATGCAAGCCATTGAAGATCGTCAAGCAGGTTTTGCTTCTACCGCTATGGTGGTGAGAAACCAAAGCTCTGATCAGACTCTAAAGATGGACTCTATGGAAACTAGAGCAATGGCTTGGGATGAAGCAGAGCGAGCCAAGCATATGGCAAGCCTATCCAAGAAAAAGGCAGAGAAAATGAAAGCTGGTGCACAAGAGACGCTGGCAGATAAACTAGCAGCGACGAGAAGAATAGCCGAAGAGAAACGTGCAAATGCAGAGGCAAAACTAAATAAGAAATCTGTAAGGACTTCTGAAAAGGCTGATTATATTAGGAGGACTGGTCACTTACCTTCTTCTTTCTCCTTCAAGTTGCCTTCTCTATGCTGCTGGTAG

Coding sequence (CDS)

ATGAGGGGGAGAGAGGAGAATGGGTATGACAACAATGGATCAAAGCATGAAAAGGCTATGGGTTTTGAGTTTCATAGAGGAAATGGAGTTAATGGCAGTTTTCATCGCCGGGTGGTCACTGCTAAATCAACTCCATCGAAGTGGGACGATGCACAGAAATGGATTTTTGGGTTGCCAAGAGGAGGAGAAAAAGGGGAGTCTAAAATCAAGCATAGAAATTCGAATGCTGATGACTTGCGGCTTATAGCTGCTGTGCCACAACAGGAGCATGAATATTTGAGCGGTGGAGATAAAAGGATCGAAGGGCAAGAAGAAAATGGAGGATTTGCTTCTGCTATGAGTAGTCGAAGTGAAGCAGAAACAAAGAAGATGGAATGTGATGAGCCCATTTGGAGAATCAATAAGCCAGTGGAGAGCTGCAAGACGGTGGTTAGATCTGTGTGTGTGAGAGACATGGGAACAGAGATGACTCCCATAGCGAGTCAGGAGCCTTCAAGGACGGCTACCCCAGTTAGAGCCACAACCCCTGTGCTTCAGAGCCCTATAACTTCTGGATCTTCCACTCCAGCAAGGCCTCACCATGAGATGCAAGCCATTGAAGATCGTCAAGCAGGTTTTGCTTCTACCGCTATGGTGGTGAGAAACCAAAGCTCTGATCAGACTCTAAAGATGGACTCTATGGAAACTAGAGCAATGGCTTGGGATGAAGCAGAGCGAGCCAAGCATATGGCAAGCCTATCCAAGAAAAAGGCAGAGAAAATGAAAGCTGGTGCACAAGAGACGCTGGCAGATAAACTAGCAGCGACGAGAAGAATAGCCGAAGAGAAACGTGCAAATGCAGAGGCAAAACTAAATAAGAAATCTGTAAGGACTTCTGAAAAGGCTGATTATATTAGGAGGACTGGTCACTTACCTTCTTCTTTCTCCTTCAAGTTGCCTTCTCTATGCTGCTGGTAG

Protein sequence

MRGREENGYDNNGSKHEKAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIFGLPRGGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSRSEAETKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTPVLQSPITSGSSTPARPHHEMQAIEDRQAGFASTAMVVRNQSSDQTLKMDSMETRAMAWDEAERAKHMASLSKKKAEKMKAGAQETLADKLAATRRIAEEKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW
Homology
[Close]
BLAST of Cla022702 vs. TrEMBL
Match: A0A0A0LMY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G350470 PE=4 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 1.1e-166
Identity = 298/336 (88.69%), Postives = 312/336 (92.86%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHEKAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIFGLPR 60
           MRGREENGYDNNGSKHEKAMGF+FHRGNG+NG FHRRVVTAKSTPSKWDDAQKWIFGLPR
Sbjct: 1   MRGREENGYDNNGSKHEKAMGFDFHRGNGINGGFHRRVVTAKSTPSKWDDAQKWIFGLPR 60

Query: 61  GGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSRSEAE 120
           GGEKGESK+KHRNSNADDLRLIAAVPQQEHEYLS G+KRIEG+EENGGFASAM+SRSEAE
Sbjct: 61  GGEKGESKVKHRNSNADDLRLIAAVPQQEHEYLSIGEKRIEGEEENGGFASAMTSRSEAE 120

Query: 121 TKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTPVLQS 180
           TKKMEC EPIWR+NKP+ESCKT+VRSVCVRDMGT+MTPIASQEPSRTATPVRATTPVLQS
Sbjct: 121 TKKMECGEPIWRVNKPLESCKTMVRSVCVRDMGTDMTPIASQEPSRTATPVRATTPVLQS 180

Query: 181 PITSGSSTPARPHHEMQAIEDRQAGFASTAMVVRN--QSSDQTLKMDSMETRAMAWDEAE 240
           PITSGSSTPARPHHEMQ IEDRQAGFASTAMVV+N  QSSDQTL+MDSMETRAMAWDEAE
Sbjct: 181 PITSGSSTPARPHHEMQTIEDRQAGFASTAMVVKNQSQSSDQTLQMDSMETRAMAWDEAE 240

Query: 241 RAKHMAS-----------LSK-----KKAEKMKAGAQETLADKLAATRRIAEEKRANAEA 300
           RAKHMAS           + K     K+AEKMKAGAQETLADKLAATRRIAEEKRANAEA
Sbjct: 241 RAKHMASDHFGPIDNFCFIPKFKKLVKRAEKMKAGAQETLADKLAATRRIAEEKRANAEA 300

Query: 301 KLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW 319
           KLNKKSVRTSEKADYIRRTGHLPS FSFKLPSLCCW
Sbjct: 301 KLNKKSVRTSEKADYIRRTGHLPSYFSFKLPSLCCW 336

[Close]
BLAST of Cla022702 vs. TrEMBL
Match: A0A061E752_THECC (Remorin family protein OS=Theobroma cacao GN=TCM_010769 PE=4 SV=1)

HSP 1 Score: 368.6 bits (945), Expect = 7.5e-99
Identity = 203/366 (55.46%), Postives = 242/366 (66.12%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHE----KAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIF 60
           MR  E+ G  N G   E     A+ FEFH+GNG N + H R    K TPSKWDDAQKW+ 
Sbjct: 1   MRSIEDKGCYNLGPAQEISSSSAISFEFHKGNGTNRASHHRTALGKPTPSKWDDAQKWLV 60

Query: 61  GLPRGGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSR 120
           GL RG +K +SK   RNSNADD RLIA VPQ+E +Y S  D+  E  + NG FA+AMSS 
Sbjct: 61  GLSRGRDKSQSKTTPRNSNADDRRLIAPVPQKEQDYSSSEDE--EAAQANG-FAAAMSSN 120

Query: 121 SEAETKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTP 180
            E ETKK++CDE IWRINK  E+  + VRS+CVRDMGTEMTPIASQEPSRTATP+RATTP
Sbjct: 121 FEGETKKVDCDEAIWRINKLAENSTSAVRSICVRDMGTEMTPIASQEPSRTATPIRATTP 180

Query: 181 VLQSPITSGSSTPARPHHEMQAIEDRQAGFAST----------------------AMVVR 240
             +SPI+SGSSTP R  H +   E  QAG  ST                      +M+  
Sbjct: 181 AARSPISSGSSTPVRCQHGVPGAEGYQAGLTSTEGRGETNAAARGNAPNGPYGQESMIHE 240

Query: 241 NQSSDQTLKMDSMETRAMAWDEAERAKHMASLSKK------------------------K 300
           N +SDQ  K +++ETRA AWDEAERAK+MA   ++                        K
Sbjct: 241 NSNSDQARKQNTLETRATAWDEAERAKYMARYKREEVKIQAWENHEKRKAEMEMKKMEVK 300

Query: 301 AEKMKAGAQETLADKLAATRRIAEEKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSF 317
           AE++KA AQE  ++KLAATRRIAEEKRANAEA+LN+K++RTSE+ADYIRRTGHLPSSFSF
Sbjct: 301 AERLKARAQERCSNKLAATRRIAEEKRANAEAELNEKAMRTSERADYIRRTGHLPSSFSF 360

[Close]
BLAST of Cla022702 vs. TrEMBL
Match: M5XG52_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007233mg PE=4 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 7.1e-97
Identity = 204/376 (54.26%), Postives = 245/376 (65.16%), Query Frame = 1 

Query: 1   MRGREENG-YDNNGSKHE----KAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWI 60
           MR  E+ G Y+N+G   E     A+ FEFH+ NG + + H R    K TPSKWDDAQKW+
Sbjct: 1   MRSIEDKGCYNNHGPTQEISGSSAINFEFHKANGASRTPHHRTALGKPTPSKWDDAQKWL 60

Query: 61  FGLPRGGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQ-----EENGGFA 120
            GL RG +K +SK K RNSNADDLRLIA VPQ+E +Y SG D  +E Q     EENG   
Sbjct: 61  VGLSRGPDKNQSKTKPRNSNADDLRLIAPVPQKEQDYSSGEDDGVEDQQEEEEEENGCDG 120

Query: 121 SAMSSRSEAETKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATP 180
           SA  ++ + ETKK++CD+ +WR NKP+E+    +RS+C+RDMGTEMTPIASQEPSRTATP
Sbjct: 121 SARPNQYDVETKKVDCDDSVWRSNKPMENSTAAMRSLCLRDMGTEMTPIASQEPSRTATP 180

Query: 181 VRATTPVLQSPITSGSSTPARP-HHEMQAI-------------EDRQAGFASTAM----- 240
           +RATTP  +SPI+SGSSTP RP  H MQA              E +  G  S A      
Sbjct: 181 IRATTPAARSPISSGSSTPVRPCQHGMQASQGYQKSTDGRSSHEAKSCGRGSGAAKRYVE 240

Query: 241 -------VVRNQSSDQTLKMDSMETRAMAWDEAERAKHMASLSKK--------------- 300
                  +  NQ+SDQ  K   +ETRAMAWDEAERAK+MA   ++               
Sbjct: 241 ESNACKSMPDNQNSDQARKPSPLETRAMAWDEAERAKYMARYKREEVRIQAWENHEKRKA 300

Query: 301 ---------KAEKMKAGAQETLADKLAATRRIAEEKRANAEAKLNKKSVRTSEKADYIRR 317
                    KAE+MKA  QE L +KLAATRRIAEEKRANAEAKLN+K++RTSEKADYIRR
Sbjct: 301 EMEMRKMEVKAERMKARGQEKLTNKLAATRRIAEEKRANAEAKLNEKALRTSEKADYIRR 360

[Close]
BLAST of Cla022702 vs. TrEMBL
Match: B9RMM0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1081720 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 9.5e-94
Identity = 200/367 (54.50%), Postives = 238/367 (64.85%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHE----KAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIF 60
           MR  E+ G  N+G   E      + FEFH+GNG N + H R    K TPSKWDDAQKW+ 
Sbjct: 1   MRSIEDKGCYNHGPIQEISTSHGISFEFHKGNGANRTSHHRTALGKPTPSKWDDAQKWLV 60

Query: 61  GLPRGGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSR 120
           GL RGG+K +SK   RNSNADD RLIA VPQQE +YLSGGD  +EG+E NG   S     
Sbjct: 61  GLSRGGDKNQSK--PRNSNADDRRLIAPVPQQERDYLSGGDD-VEGEEANGWPDST---- 120

Query: 121 SEAETKKMECDEPIWRINKPVE-SCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATT 180
              ETKK++CDEPIWRINK V+ S  + VRS+CVRDMGTEMTPIASQEPSRTATP+RA T
Sbjct: 121 ---ETKKVDCDEPIWRINKTVQNSTASAVRSICVRDMGTEMTPIASQEPSRTATPIRAGT 180

Query: 181 PVLQSPITSGSSTPARPHHEMQAIEDR-QAGFAST---------------------AMVV 240
           PV +SPI+SGSSTP R  H +Q  +   QAG AST                       + 
Sbjct: 181 PVARSPISSGSSTPVRCQHGLQCTDQGYQAGLASTESRGGEPSSASRGRHGEEPNGCKMS 240

Query: 241 RNQSSDQTLKMDSMETRAMAWDEAERAKHMASLSKK------------------------ 300
            N+  D+   ++ +E RA AWDEAERAK+MA   ++                        
Sbjct: 241 ENKDLDEARNLNPLEMRATAWDEAERAKYMARYKREEVKIQAWENHEKRKAEMEMKKMEV 300

Query: 301 KAEKMKAGAQETLADKLAATRRIAEEKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFS 317
           KAE++KA AQE L  KLA T+R+AEEKRANAEAKLN+K+VRT+E+ADYIRRTGHLPSSFS
Sbjct: 301 KAERIKARAQEKLTSKLATTKRMAEEKRANAEAKLNEKAVRTAERADYIRRTGHLPSSFS 357

[Close]
BLAST of Cla022702 vs. TrEMBL
Match: A0A059D8Z3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03464 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 3.4e-91
Identity = 192/340 (56.47%), Postives = 225/340 (66.18%), Query Frame = 1 

Query: 19  AMGFEFHRGNGVN-GSFHRRVVTAKSTPSKWDDAQKWIFGLPR-GGEKGESKIKHRNSNA 78
           ++GFEFHR NG N  S H R    K TPSKWDDAQKW+ G+ R GG+K +SK K RNSNA
Sbjct: 24  SIGFEFHRANGTNRASHHHRTALGKPTPSKWDDAQKWLVGISRVGGDKSQSKTKPRNSNA 83

Query: 79  DDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSRSEAETKKMECDEPIWRINKP 138
           DD RLIA  P  E EY S  D      E+NGG    M+ + E ETKK+ECDE +WRINKP
Sbjct: 84  DDRRLIAPAPP-EQEYSSDEDGC--ELEQNGGMDHEMAGQYEVETKKVECDESVWRINKP 143

Query: 139 VESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTPVLQSPITSGSSTPARPHHEM 198
            ++C   VRSVCVRDMGT+MTPIASQEPSRT TP+RATTP  +SPI SGSSTP R  H +
Sbjct: 144 AQNCMPAVRSVCVRDMGTDMTPIASQEPSRTGTPIRATTPAARSPINSGSSTPVRCQHGV 203

Query: 199 QAIEDRQAGFASTAMVVR----------------NQSSDQTLKMDSMETRAMAWDEAERA 258
            +IE R  G A +    R                N S D   K+  +E+RA+AWDEAERA
Sbjct: 204 VSIEGR-GGVAPSTNGPRVIGACMEGAHACEHSGNMSLDHAKKLSPLESRAVAWDEAERA 263

Query: 259 KHMASLSKK------------------------KAEKMKAGAQETLADKLAATRRIAEEK 317
           K+MA   ++                        KAE++KA AQE LA+KLA+TRRIAEEK
Sbjct: 264 KYMARYKREEVKIQAWENHEKRKAEMQMKKMEVKAERLKARAQEKLANKLASTRRIAEEK 323

[Close]
BLAST of Cla022702 vs. NCBI nr
Match: gi|700207245|gb|KGN62364.1| (hypothetical protein Csa_2G350470 [Cucumis sativus])

HSP 1 Score: 594.0 bits (1530), Expect = 1.6e-166
Identity = 298/336 (88.69%), Postives = 312/336 (92.86%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHEKAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIFGLPR 60
           MRGREENGYDNNGSKHEKAMGF+FHRGNG+NG FHRRVVTAKSTPSKWDDAQKWIFGLPR
Sbjct: 1   MRGREENGYDNNGSKHEKAMGFDFHRGNGINGGFHRRVVTAKSTPSKWDDAQKWIFGLPR 60

Query: 61  GGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSRSEAE 120
           GGEKGESK+KHRNSNADDLRLIAAVPQQEHEYLS G+KRIEG+EENGGFASAM+SRSEAE
Sbjct: 61  GGEKGESKVKHRNSNADDLRLIAAVPQQEHEYLSIGEKRIEGEEENGGFASAMTSRSEAE 120

Query: 121 TKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTPVLQS 180
           TKKMEC EPIWR+NKP+ESCKT+VRSVCVRDMGT+MTPIASQEPSRTATPVRATTPVLQS
Sbjct: 121 TKKMECGEPIWRVNKPLESCKTMVRSVCVRDMGTDMTPIASQEPSRTATPVRATTPVLQS 180

Query: 181 PITSGSSTPARPHHEMQAIEDRQAGFASTAMVVRN--QSSDQTLKMDSMETRAMAWDEAE 240
           PITSGSSTPARPHHEMQ IEDRQAGFASTAMVV+N  QSSDQTL+MDSMETRAMAWDEAE
Sbjct: 181 PITSGSSTPARPHHEMQTIEDRQAGFASTAMVVKNQSQSSDQTLQMDSMETRAMAWDEAE 240

Query: 241 RAKHMAS-----------LSK-----KKAEKMKAGAQETLADKLAATRRIAEEKRANAEA 300
           RAKHMAS           + K     K+AEKMKAGAQETLADKLAATRRIAEEKRANAEA
Sbjct: 241 RAKHMASDHFGPIDNFCFIPKFKKLVKRAEKMKAGAQETLADKLAATRRIAEEKRANAEA 300

Query: 301 KLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW 319
           KLNKKSVRTSEKADYIRRTGHLPS FSFKLPSLCCW
Sbjct: 301 KLNKKSVRTSEKADYIRRTGHLPSYFSFKLPSLCCW 336

[Close]
BLAST of Cla022702 vs. NCBI nr
Match: gi|449450383|ref|XP_004142942.1| (PREDICTED: uncharacterized protein At3g61260 [Cucumis sativus])

HSP 1 Score: 590.9 bits (1522), Expect = 1.3e-165
Identity = 296/344 (86.05%), Postives = 310/344 (90.12%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHEKAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIFGLPR 60
           MRGREENGYDNNGSKHEKAMGF+FHRGNG+NG FHRRVVTAKSTPSKWDDAQKWIFGLPR
Sbjct: 1   MRGREENGYDNNGSKHEKAMGFDFHRGNGINGGFHRRVVTAKSTPSKWDDAQKWIFGLPR 60

Query: 61  GGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSRSEAE 120
           GGEKGESK+KHRNSNADDLRLIAAVPQQEHEYLS G+KRIEG+EENGGFASAM+SRSEAE
Sbjct: 61  GGEKGESKVKHRNSNADDLRLIAAVPQQEHEYLSIGEKRIEGEEENGGFASAMTSRSEAE 120

Query: 121 TKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTPVLQS 180
           TKKMEC EPIWR+NKP+ESCKT+VRSVCVRDMGT+MTPIASQEPSRTATPVRATTPVLQS
Sbjct: 121 TKKMECGEPIWRVNKPLESCKTMVRSVCVRDMGTDMTPIASQEPSRTATPVRATTPVLQS 180

Query: 181 PITSGSSTPARPHHEMQAIEDRQAGFASTAMVVRNQS--SDQTLKMDSMETRAMAWDEAE 240
           PITSGSSTPARPHHEMQ IEDRQAGFASTAMVV+NQS  SDQTL+MDSMETRAMAWDEAE
Sbjct: 181 PITSGSSTPARPHHEMQTIEDRQAGFASTAMVVKNQSQSSDQTLQMDSMETRAMAWDEAE 240

Query: 241 RAKHMASLS------------------------KKKAEKMKAGAQETLADKLAATRRIAE 300
           RAKHMA                           +K+AEKMKAGAQETLADKLAATRRIAE
Sbjct: 241 RAKHMARYKREEVRIQAWETSEKKKAESKMRKMEKRAEKMKAGAQETLADKLAATRRIAE 300

Query: 301 EKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW 319
           EKRANAEAKLNKKSVRTSEKADYIRRTGHLPS FSFKLPSLCCW
Sbjct: 301 EKRANAEAKLNKKSVRTSEKADYIRRTGHLPSYFSFKLPSLCCW 344

[Close]
BLAST of Cla022702 vs. NCBI nr
Match: gi|659087400|ref|XP_008444431.1| (PREDICTED: uncharacterized protein At3g61260 [Cucumis melo])

HSP 1 Score: 586.6 bits (1511), Expect = 2.5e-164
Identity = 294/344 (85.47%), Postives = 308/344 (89.53%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHEKAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIFGLPR 60
           MRGREENGYDNNGSKHEKAMGFEFHRGNG+NG FHRRVVTAKSTPSKWDDAQKWIFGLPR
Sbjct: 1   MRGREENGYDNNGSKHEKAMGFEFHRGNGINGGFHRRVVTAKSTPSKWDDAQKWIFGLPR 60

Query: 61  GGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSRSEAE 120
           GGEKGESK+KHRNSNADDLRLIAAVPQQEHEYLS G+KRIEG+EEN GFASAM+SRSEAE
Sbjct: 61  GGEKGESKVKHRNSNADDLRLIAAVPQQEHEYLSSGEKRIEGEEENEGFASAMTSRSEAE 120

Query: 121 TKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTPVLQS 180
           TKKMEC EPIWR+NKP+ESCKT+VRSVCVRDMGT+MTPIASQEPSRTATPVRATTPVLQS
Sbjct: 121 TKKMECGEPIWRVNKPLESCKTMVRSVCVRDMGTDMTPIASQEPSRTATPVRATTPVLQS 180

Query: 181 PITSGSSTPARPHHEMQAIEDRQAGFASTAMVVRNQS--SDQTLKMDSMETRAMAWDEAE 240
           PITSGSSTPARPHHEMQ IEDRQAGFASTAMVV+NQS  S+QTL+ DSMETRAMAWDEAE
Sbjct: 181 PITSGSSTPARPHHEMQVIEDRQAGFASTAMVVKNQSQSSNQTLQADSMETRAMAWDEAE 240

Query: 241 RAKHMASLS------------------------KKKAEKMKAGAQETLADKLAATRRIAE 300
           RAKHMA                           +KKAEKMKAGAQE +ADKLAATRRIAE
Sbjct: 241 RAKHMARYKREEVRIQAWETSEKRKAESKMRKIEKKAEKMKAGAQEMMADKLAATRRIAE 300

Query: 301 EKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW 319
           EKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW
Sbjct: 301 EKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSFKLPSLCCW 344

[Close]
BLAST of Cla022702 vs. NCBI nr
Match: gi|590695858|ref|XP_007045008.1| (Remorin family protein [Theobroma cacao])

HSP 1 Score: 368.6 bits (945), Expect = 1.1e-98
Identity = 203/366 (55.46%), Postives = 242/366 (66.12%), Query Frame = 1 

Query: 1   MRGREENGYDNNGSKHE----KAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWIF 60
           MR  E+ G  N G   E     A+ FEFH+GNG N + H R    K TPSKWDDAQKW+ 
Sbjct: 1   MRSIEDKGCYNLGPAQEISSSSAISFEFHKGNGTNRASHHRTALGKPTPSKWDDAQKWLV 60

Query: 61  GLPRGGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQEENGGFASAMSSR 120
           GL RG +K +SK   RNSNADD RLIA VPQ+E +Y S  D+  E  + NG FA+AMSS 
Sbjct: 61  GLSRGRDKSQSKTTPRNSNADDRRLIAPVPQKEQDYSSSEDE--EAAQANG-FAAAMSSN 120

Query: 121 SEAETKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATPVRATTP 180
            E ETKK++CDE IWRINK  E+  + VRS+CVRDMGTEMTPIASQEPSRTATP+RATTP
Sbjct: 121 FEGETKKVDCDEAIWRINKLAENSTSAVRSICVRDMGTEMTPIASQEPSRTATPIRATTP 180

Query: 181 VLQSPITSGSSTPARPHHEMQAIEDRQAGFAST----------------------AMVVR 240
             +SPI+SGSSTP R  H +   E  QAG  ST                      +M+  
Sbjct: 181 AARSPISSGSSTPVRCQHGVPGAEGYQAGLTSTEGRGETNAAARGNAPNGPYGQESMIHE 240

Query: 241 NQSSDQTLKMDSMETRAMAWDEAERAKHMASLSKK------------------------K 300
           N +SDQ  K +++ETRA AWDEAERAK+MA   ++                        K
Sbjct: 241 NSNSDQARKQNTLETRATAWDEAERAKYMARYKREEVKIQAWENHEKRKAEMEMKKMEVK 300

Query: 301 AEKMKAGAQETLADKLAATRRIAEEKRANAEAKLNKKSVRTSEKADYIRRTGHLPSSFSF 317
           AE++KA AQE  ++KLAATRRIAEEKRANAEA+LN+K++RTSE+ADYIRRTGHLPSSFSF
Sbjct: 301 AERLKARAQERCSNKLAATRRIAEEKRANAEAELNEKAMRTSERADYIRRTGHLPSSFSF 360

[Close]
BLAST of Cla022702 vs. NCBI nr
Match: gi|596177415|ref|XP_007223247.1| (hypothetical protein PRUPE_ppa007233mg [Prunus persica])

HSP 1 Score: 362.1 bits (928), Expect = 1.0e-96
Identity = 204/376 (54.26%), Postives = 245/376 (65.16%), Query Frame = 1 

Query: 1   MRGREENG-YDNNGSKHE----KAMGFEFHRGNGVNGSFHRRVVTAKSTPSKWDDAQKWI 60
           MR  E+ G Y+N+G   E     A+ FEFH+ NG + + H R    K TPSKWDDAQKW+
Sbjct: 1   MRSIEDKGCYNNHGPTQEISGSSAINFEFHKANGASRTPHHRTALGKPTPSKWDDAQKWL 60

Query: 61  FGLPRGGEKGESKIKHRNSNADDLRLIAAVPQQEHEYLSGGDKRIEGQ-----EENGGFA 120
            GL RG +K +SK K RNSNADDLRLIA VPQ+E +Y SG D  +E Q     EENG   
Sbjct: 61  VGLSRGPDKNQSKTKPRNSNADDLRLIAPVPQKEQDYSSGEDDGVEDQQEEEEEENGCDG 120

Query: 121 SAMSSRSEAETKKMECDEPIWRINKPVESCKTVVRSVCVRDMGTEMTPIASQEPSRTATP 180
           SA  ++ + ETKK++CD+ +WR NKP+E+    +RS+C+RDMGTEMTPIASQEPSRTATP
Sbjct: 121 SARPNQYDVETKKVDCDDSVWRSNKPMENSTAAMRSLCLRDMGTEMTPIASQEPSRTATP 180

Query: 181 VRATTPVLQSPITSGSSTPARP-HHEMQAI-------------EDRQAGFASTAM----- 240
           +RATTP  +SPI+SGSSTP RP  H MQA              E +  G  S A      
Sbjct: 181 IRATTPAARSPISSGSSTPVRPCQHGMQASQGYQKSTDGRSSHEAKSCGRGSGAAKRYVE 240

Query: 241 -------VVRNQSSDQTLKMDSMETRAMAWDEAERAKHMASLSKK--------------- 300
                  +  NQ+SDQ  K   +ETRAMAWDEAERAK+MA   ++               
Sbjct: 241 ESNACKSMPDNQNSDQARKPSPLETRAMAWDEAERAKYMARYKREEVRIQAWENHEKRKA 300

Query: 301 ---------KAEKMKAGAQETLADKLAATRRIAEEKRANAEAKLNKKSVRTSEKADYIRR 317
                    KAE+MKA  QE L +KLAATRRIAEEKRANAEAKLN+K++RTSEKADYIRR
Sbjct: 301 EMEMRKMEVKAERMKARGQEKLTNKLAATRRIAEEKRANAEAKLNEKALRTSEKADYIRR 360

The following BLAST results are available for this feature:
BLAST of Cla022702 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMY4_CUCSA1.1e-16688.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G350470 PE=4 SV=1[more]
A0A061E752_THECC7.5e-9955.46Remorin family protein OS=Theobroma cacao GN=TCM_010769 PE=4 SV=1[more]
M5XG52_PRUPE7.1e-9754.26Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007233mg PE=4 SV=1[more]
B9RMM0_RICCO9.5e-9454.50Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1081720 PE=4 SV=1[more]
A0A059D8Z3_EUCGR3.4e-9156.47Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03464 PE=4 SV=1[more]
BLAST of Cla022702 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207245|gb|KGN62364.1|1.6e-16688.69hypothetical protein Csa_2G350470 [Cucumis sativus][more]
gi|449450383|ref|XP_004142942.1|1.3e-16586.05PREDICTED: uncharacterized protein At3g61260 [Cucumis sativus][more]
gi|659087400|ref|XP_008444431.1|2.5e-16485.47PREDICTED: uncharacterized protein At3g61260 [Cucumis melo][more]
gi|590695858|ref|XP_007045008.1|1.1e-9855.46Remorin family protein [Theobroma cacao][more]
gi|596177415|ref|XP_007223247.1|1.0e-9654.26hypothetical protein PRUPE_ppa007233mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005516Remorin_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009853 photorespiration
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0006814 sodium ion transport
biological_process GO:0051788 response to misfolded protein
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0015992 proton transport
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0010181 FMN binding
molecular_function GO:0051287 NAD binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022702Cla022702.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005516Remorin, C-terminalPFAMPF03763Remorin_Ccoord: 222..306
score: 3.5
NoneNo IPR availableunknownCoilCoilcoord: 263..290
scor
NoneNo IPR availablePANTHERPTHR31471FAMILY NOT NAMEDcoord: 1..318
score: 1.7E
NoneNo IPR availablePANTHERPTHR31471:SF15F12A21.28coord: 1..318
score: 1.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla022702Cla97C08G160980Watermelon (97103) v2wmwmbB100
Cla022702Csa2G350470Cucumber (Chinese Long) v2cuwmB111
Cla022702MELO3C010730Melon (DHL92) v3.5.1mewmB300
Cla022702ClCG08G017290Watermelon (Charleston Gray)wcgwmB400
Cla022702CSPI02G17740Wild cucumber (PI 183967)cpiwmB116
Cla022702Cucsa.394880Cucumber (Gy14) v1cgywmB706
Cla022702CmaCh18G007160Cucurbita maxima (Rimu)cmawmB364
Cla022702CmaCh05G000740Cucurbita maxima (Rimu)cmawmB753
Cla022702CmaCh12G000610Cucurbita maxima (Rimu)cmawmB154
Cla022702CmoCh04G019150Cucurbita moschata (Rifu)cmowmB666
Cla022702CmoCh18G007030Cucurbita moschata (Rifu)cmowmB358
Cla022702CmoCh12G000450Cucurbita moschata (Rifu)cmowmB139
Cla022702CmoCh05G000810Cucurbita moschata (Rifu)cmowmB748
Cla022702Lsi08G016070Bottle gourd (USVL1VR-Ls)lsiwmB465
Cla022702Cp4.1LG09g06120Cucurbita pepo (Zucchini)cpewmB022
Cla022702Cp4.1LG11g00270Cucurbita pepo (Zucchini)cpewmB101
Cla022702Cp4.1LG01g16010Cucurbita pepo (Zucchini)cpewmB397
Cla022702Cp4.1LG07g00440Cucurbita pepo (Zucchini)cpewmB789
Cla022702MELO3C010730.2Melon (DHL92) v3.6.1medwmB295
Cla022702Carg14274Silver-seed gourdcarwmB0230
Cla022702Carg20464Silver-seed gourdcarwmB0621
Cla022702Carg11944Silver-seed gourdcarwmB0172
Cla022702Carg21243Silver-seed gourdcarwmB0685
Cla022702CsaV3_2G025340Cucumber (Chinese Long) v3cucwmB124
Cla022702Bhi04G000483Wax gourdwgowmB297
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla022702Bottle gourd (USVL1VR-Ls)lsiwmB296
Cla022702Cucumber (Gy14) v2cgybwmB108
Cla022702Cucumber (Gy14) v2cgybwmB349
Cla022702Melon (DHL92) v3.6.1medwmB049
Cla022702Cucumber (Chinese Long) v3cucwmB399
Cla022702Wax gourdwgowmB540
Cla022702Cucumber (Gy14) v1cgywmB078
Cla022702Cucurbita maxima (Rimu)cmawmB670
Cla022702Wild cucumber (PI 183967)cpiwmB382
Cla022702Melon (DHL92) v3.5.1mewmB048
Cla022702Cucumber (Chinese Long) v2cuwmB376