Cla022197 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022197
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Histidine phosphotransfer protein (AHRD V1 ***- B9HE19_POPTR); contains Interpro domain(s) IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) region
Location	Chr8 : 21430140 .. 21432862 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCAAACCTTTTGCAACGTCAAGTTGCCTACACGAAGAGGTGCTTTTTTGAGCAGGTTTATTTTCAAATACAGGAAGTTCTTTCACTTTTCTCGTGTCTTTCACATGGTGCAATTGTACCCTCTAACAGTATAACTTGTACTTTGCATTAAGCATGTTGGAGAATCCTTGGTTCACGGTTTCCTGTACAGTACATAAGTTTTGTGTCTAATTTGAAGGGCAGGTTTAGCCTTACGATGCATAAGCTGATCAGGAACAGGAACCGGTTTTCCTTCGGATAGGAGCCAAACTGAGCCATCTGTCCAAGAACATATTCATGTCCTTTATTTTGGGGCGGACTAGATTTGGTAATTGAACTTGTTCCTAATAGTGCTATGGCTTGGCCATCTAAATCTTCCATTTGAGAGTGAAGTAGAAAGTAAAACCACAAGCCTCTGAATATTTGGTTATAGAATAAACTATTATTTATTTTCTCAAGTTGTTTCTCCAGGATTTAAGTTCTGGATCGCTGTAATTTATAGGTGAGATGGACTAAACATGAAGTGAAAGGTCTCAGCTGGTTCTTGGTCAATTGGATCATAATAATACTGGATGACTACACAGTTGTGCTCTACGTTTCAGACCAGCATAAATTATCAGCAGACCAGGAATAAGACAAACAAAACTTAAAAAATGCTAGGCCAGTTGTTATGATTCTTGAGAATCTTAGCATTCACGTCTATATGGATATTCCATCAGTTTTGAATCATCTCTCTTTTTGAAATTTGTGAATCTTTAGTTATATTTACTTCAAATGATTGACAAATAACTTACTCCATCATAAATGGTTGAACCAGACACAATCCTTTGTTGCAGGGTTATCTTGATCGTGATCAATTCACTCAGCTTGAAGAACTGCAAGATGATGCTAACCCGAATTTTGCTGAAGAAATTGTGTCTTTATTCTACAATGATTCAGCCAGACTCATACGGAGCATTGAACAAACCATGTGAGTATAGAGCCTTGACATTATCAAAATCATTCTGGAAAACCGTTTATTAAAGCCTACTGTTTTACTGGCTCGTACAGGGTCAGTAAGCCAACGGATTTTGAAAAGCTTGACAACTACATGCACCAGTTCAAGGGCAGTAGCTCAAGGTAAAACCATCATATAATCATGGTATTAAATTTTCATCGACATGTTGATATTTTCATGTTTCCATAGATTCGATATCAATATGAGGGGTGAATCAATATTTCCATTGTATCGTAGAAAAATCCATGAAACATTAAAAAAAAAAAAAAAACAACAAAATGTCACTAATGTAAATATAATATAAATAATAGACGTGTTAACTTGTTTAAAAATCATAAAATGTTTATTTATTAATTTAAATTTATTCTTGAACTTCTTGTTTTTACAAATTTTTCAGAAATATCTATTGAAATTGAAATTTCCATAGAATGAGGACCTCGATAATTATGGTGAAATCAACATTTTAAACATTGGATATAATCATATAGTAGATTAGCCAAATGGTGGCACGTGGGCAGGGTGCATATTCAATCGCCCTAGCTTTAGGGAACTCTAGGTATCATTAATTATGAACATTCACCTCCAGTTATAACCTTTTTCGTTAATAGTAATGGGAAGAGGGTAATCATGTTTACGCAGAAACTATTCTATGGCAGTTCATTCATTGTTGATAAATATATGTGAGGATGAATTTGATTGTTCTGGAATATTGGTTCAATGATGACCTCATTTTATCTTCTGTGAAAAGTTGAATCCTCCATGTGTCATGCAAGTCTATTTCATGACAAAGAAATATGGTGGTAGTGTCTTAATCTTTTTAAGAATCTTGTTTTAATTCACTTTATTTTGTTGCTAGCATTGGAGCCAATAGGGTGACTGATGCATGCTCACAGTTTAGAGAATACTGCTTGGCAGGCAATCTTGAAGGGTAATGATCTATATAACTATATATTATCAGTTCATATATTCAGTTGACAATCGACATAATTAAACTTGTTAGCTCTTCTTTTTTTCCTTTTTCTCCTTTTGTTCTAAAGATGCATAAGGAGTTTCCAGGAAGTGAAACAAGAGCATGAAATTCTGAAGAAGAAGCTTGATACCTATTTCCAGGTTTCTTTTTCCTCATTAATATTCTAAATTGGTTAAATTAGACAAAAATAACCCAAGTAACTTTGGAGTATGTTTGTATGATGTTCAAGACTTCCAATATTTTCATTTTTATTCTTGAATTTTGAAATTCATTCCAAAAAGCACCCCTCAAAGAGTTTTACCTTAGAAAATGACACGACGATTAATATGTAAAGATTGAAAGAAAGACATGTGTGACATCAATGTATAAAAAATAATTATATAAATGATTAATGATATCTTTAGACATGAAATAAACGAATAACAACGGTTTTAATCTTCTATATAGTTGTAAGCAAATATGATGTACATCTCTTAATTTTTATACATGTTATCATGCTAATTTTTATAATCTATTTTAGCTGAAAATGGAACAATTTCAAAGTTCAAAGATAAAAATGAAACTTTTCAAAAAAATCAAGAGTATAGTTAGAGACCTACGCTTACCTCAAAGTTGAATGATATTTTGGTATAATTTAATATTAGAAATTCTAGCTCTATATTTATTATATATATCTTATGCATTTGCGTTTGGTTTCTATTTTTAGCTAGTTAGACAAGCTGGGAAAGGTTGA

mRNA sequence

ATGGACTCAAACCTTTTGCAACGTCAAGTTGCCTACACGAAGAGGTGCTTTTTTGAGCAGGGTTATCTTGATCGTGATCAATTCACTCAGCTTGAAGAACTGCAAGATGATGCTAACCCGAATTTTGCTGAAGAAATTGTGTCTTTATTCTACAATGATTCAGCCAGACTCATACGGAGCATTGAACAAACCATGGTCAGTAAGCCAACGGATTTTGAAAAGCTTGACAACTACATGCACCAGTTCAAGGGCAGTAGCTCAAGCATTGGAGCCAATAGGGTGACTGATGCATGCTCACAGTTTAGAGAATACTGCTTGGCAGGCAATCTTGAAGGATGCATAAGGAGTTTCCAGGAAGTGAAACAAGAGCATGAAATTCTGAAGAAGAAGCTTGATACCTATTTCCAGCTAGTTAGACAAGCTGGGAAAGGTTGA

Coding sequence (CDS)

ATGGACTCAAACCTTTTGCAACGTCAAGTTGCCTACACGAAGAGGTGCTTTTTTGAGCAGGGTTATCTTGATCGTGATCAATTCACTCAGCTTGAAGAACTGCAAGATGATGCTAACCCGAATTTTGCTGAAGAAATTGTGTCTTTATTCTACAATGATTCAGCCAGACTCATACGGAGCATTGAACAAACCATGGTCAGTAAGCCAACGGATTTTGAAAAGCTTGACAACTACATGCACCAGTTCAAGGGCAGTAGCTCAAGCATTGGAGCCAATAGGGTGACTGATGCATGCTCACAGTTTAGAGAATACTGCTTGGCAGGCAATCTTGAAGGATGCATAAGGAGTTTCCAGGAAGTGAAACAAGAGCATGAAATTCTGAAGAAGAAGCTTGATACCTATTTCCAGCTAGTTAGACAAGCTGGGAAAGGTTGA

Protein sequence

MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEVKQEHEILKKKLDTYFQLVRQAGKG

Homology

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BLAST of Cla022197 vs. Swiss-Prot
Match: PHP5_ORYSJ (Pseudo histidine-containing phosphotransfer protein 5 OS=Oryza sativa subsp. japonica GN=PHP5 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.5e-39
Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+   L+RQ A  K+  F+QGYLD +QF Q+E+LQD+ANPNFAEE+VSLF+ DS R++ +
Sbjct: 1   MEYGNLRRQAASLKKSLFDQGYLD-EQFCQVEDLQDEANPNFAEEVVSLFFKDSTRVMLN 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
            EQ +   P DF + D +M Q KGS SSIGA+RV + C+ FR +C   N EGC RSFQ+V
Sbjct: 61  FEQAIEKHPKDFARWDTHMQQLKGSCSSIGASRVKNECTSFRNFCGEENAEGCTRSFQKV 120

Query: 121 KQEHEILKKKLDTYFQLVRQAG 143
           K+EH +L++K ++YFQL+RQAG
Sbjct: 121 KREHAVLRQKWESYFQLLRQAG 141

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BLAST of Cla022197 vs. Swiss-Prot
Match: AHP4_ARATH (Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 PE=1 SV=2)

HSP 1 Score: 157.9 bits (398), Expect = 8.2e-38
Identity = 73/117 (62.39%), Postives = 93/117 (79.49%), Query Frame = 1


Query: 20  QGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDNYM 79
           QGYLD +QF +LEELQDDANPNF EE+ +L++ DSARLI +I+Q +     DF +LD+YM
Sbjct: 9   QGYLD-EQFMELEELQDDANPNFVEEVSALYFKDSARLINNIDQALERGSFDFNRLDSYM 68

Query: 80  HQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEVKQEHEILKKKLDTYFQ 137
           HQFKGSS+SIGA++V   C+ FREYC AGN EGC+R+FQ++K+EH  L+KKL+ YFQ
Sbjct: 69  HQFKGSSTSIGASKVKAECTTFREYCRAGNAEGCLRTFQQLKKEHSTLRKKLEHYFQ 124

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BLAST of Cla022197 vs. Swiss-Prot
Match: PHP2_ORYSJ (Pseudo histidine-containing phosphotransfer protein 2 OS=Oryza sativa subsp. japonica GN=PHP2 PE=2 SV=3)

HSP 1 Score: 154.8 bits (390), Expect = 7.0e-37
Identity = 75/142 (52.82%), Postives = 104/142 (73.24%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+ + L+RQ+ + K+  F+QGYLD +QF QLEELQD+++PNF EE+ +LF+ DS+RL+ +
Sbjct: 1   MEYSNLRRQIIFMKKNLFDQGYLD-EQFNQLEELQDESSPNFVEEVAALFFKDSSRLLTN 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQ +   P DF +LD+ + Q KGS SSIGA R+ + CS F+  C   NLEGC RS Q++
Sbjct: 61  IEQAIDKYPQDFYRLDSLVQQLKGSGSSIGALRMKNECSVFKVNCNDRNLEGCRRSLQKM 120

Query: 121 KQEHEILKKKLDTYFQLVRQAG 143
           K+EH  LK+KL++YFQL+RQ G
Sbjct: 121 KREHATLKQKLESYFQLLRQVG 141

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BLAST of Cla022197 vs. Swiss-Prot
Match: PHP1_ORYSJ (Pseudo histidine-containing phosphotransfer protein 1 OS=Oryza sativa subsp. japonica GN=PHP1 PE=3 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 9.1e-37
Identity = 71/123 (57.72%), Postives = 96/123 (78.05%), Query Frame = 1


Query: 20  QGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDNYM 79
           +GYLD +QF Q+E+LQD+A+PNF EE+V+LF+ DS RL+ +IEQ +   P DF + D YM
Sbjct: 56  KGYLD-EQFCQVEDLQDEASPNFVEEVVTLFFKDSGRLMSNIEQALEKYPRDFNRWDTYM 115

Query: 80  HQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEVKQEHEILKKKLDTYFQLVR 139
            Q KGS SSIGA+R+ + C  FR+ C  GN+EGC+RSFQ+VK+EH +L++KL++YFQL+R
Sbjct: 116 QQLKGSCSSIGASRMKNECMSFRDSCGQGNVEGCMRSFQKVKREHAVLRQKLESYFQLLR 175

Query: 140 QAG 143
           QAG
Sbjct: 176 QAG 177

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BLAST of Cla022197 vs. Swiss-Prot
Match: AHP1_ARATH (Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.6e-28
Identity = 64/140 (45.71%), Postives = 96/140 (68.57%), Query Frame = 1


Query: 4   NLLQRQVA---YTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 63
           +L+Q+Q +   YTK  F E G LD  QF QL++LQD++NP+F  ++V+LF+ DS R++  
Sbjct: 2   DLVQKQKSLQDYTKSLFLE-GILD-SQFLQLQQLQDESNPDFVSQVVTLFFQDSDRILND 61

Query: 64  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 123
           +  ++  +  DF+K+D ++HQ KGSSSSIGA RV +AC  FR +C   N+E C R  Q+V
Sbjct: 62  LSLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVKNACVVFRSFCEQQNVEACHRCLQQV 121

Query: 124 KQEHEILKKKLDTYFQLVRQ 141
           KQE+ ++K +L+T F+L +Q
Sbjct: 122 KQEYYLVKNRLETLFKLEQQ 139

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BLAST of Cla022197 vs. TrEMBL
Match: A0A0A0LLW8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373410 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 4.6e-72
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           MDSNLL RQVAYTKRC FEQGYLDRDQFTQLEELQDD NPNFAEEIVSLFYNDSARLIRS
Sbjct: 1   MDSNLLHRQVAYTKRCLFEQGYLDRDQFTQLEELQDDTNPNFAEEIVSLFYNDSARLIRS 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQTM SKPTDFEKLDN MHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGC RSFQ+V
Sbjct: 61  IEQTMASKPTDFEKLDNDMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCTRSFQQV 120

Query: 121 KQEHEILKKKLDTYFQLVRQAGKG 145
           KQEHEILKKKLDTYFQLVRQAGKG
Sbjct: 121 KQEHEILKKKLDTYFQLVRQAGKG 144

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BLAST of Cla022197 vs. TrEMBL
Match: A5ATK8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008201 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.5e-50
Identity = 98/142 (69.01%), Postives = 120/142 (84.51%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+ N LQRQVAY +R  F+QGYLD +QF QLE+LQDDANPNF EEIV+LFY DSARLI +
Sbjct: 1   MERNPLQRQVAYMRRSLFDQGYLD-EQFVQLEDLQDDANPNFVEEIVTLFYTDSARLIHN 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQ + S+P DF +LD+YMHQFKGSSSSIGA +V + C+QFRE+C A + EGC+R+FQ+V
Sbjct: 61  IEQALESRPLDFIRLDDYMHQFKGSSSSIGAKKVKNECTQFREHCSARSAEGCVRTFQQV 120

Query: 121 KQEHEILKKKLDTYFQLVRQAG 143
           KQEH IL++KL+TYFQL RQAG
Sbjct: 121 KQEHTILRRKLETYFQLARQAG 141

[Close]

BLAST of Cla022197 vs. TrEMBL
Match: F6H360_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00210 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 6.5e-50
Identity = 98/142 (69.01%), Postives = 120/142 (84.51%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+ N LQRQVAY +R  F+QGYLD +QF QLE+LQDDANPNF EEIV+LFY DSARLI +
Sbjct: 42  MERNPLQRQVAYMRRSLFDQGYLD-EQFVQLEDLQDDANPNFVEEIVTLFYTDSARLIHN 101

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQ + S+P DF +LD+YMHQFKGSSSSIGA +V + C+QFRE+C A + EGC+R+FQ+V
Sbjct: 102 IEQALESRPLDFIRLDDYMHQFKGSSSSIGAKKVKNECTQFREHCSARSAEGCVRTFQQV 161

Query: 121 KQEHEILKKKLDTYFQLVRQAG 143
           KQEH IL++KL+TYFQL RQAG
Sbjct: 162 KQEHTILRRKLETYFQLARQAG 182

[Close]

BLAST of Cla022197 vs. TrEMBL
Match: A0A067GJJ9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032249mg PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-49
Identity = 94/141 (66.67%), Postives = 119/141 (84.40%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+SN LQ QV Y +R  F+QGYLD +Q  QLE+LQDDANPNF EE+VSLFY+DSARLI++
Sbjct: 1   MNSNQLQHQVLYMRRSLFDQGYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQN 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQT+ ++P DF +LD+ +HQFKGS SSIGA +V DACSQFREYC AGN EGC RSFQ +
Sbjct: 61  IEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKDACSQFREYCNAGNAEGCSRSFQLI 120

Query: 121 KQEHEILKKKLDTYFQLVRQA 142
           KQE+E L+++L++YFQ+V+QA
Sbjct: 121 KQEYETLRRRLESYFQMVKQA 141

[Close]

BLAST of Cla022197 vs. TrEMBL
Match: V4UNH8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009825mg PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.4e-49
Identity = 93/141 (65.96%), Postives = 118/141 (83.69%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+SN LQ QV Y +R  F+QGYLD +Q  QLE+LQDDANPNF EE+VSLFY+DSARLI++
Sbjct: 1   MNSNQLQHQVLYMRRSLFDQGYLDSEQLIQLEDLQDDANPNFVEEVVSLFYSDSARLIQN 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQT+ ++P DF +LD+ +HQFKGS SSIGA +V DACSQFREYC AGN EGC  SFQ +
Sbjct: 61  IEQTLSNRPVDFSRLDDILHQFKGSCSSIGAKKVKDACSQFREYCNAGNAEGCSSSFQLI 120

Query: 121 KQEHEILKKKLDTYFQLVRQA 142
           KQE+E L+++L++YFQ+V+QA
Sbjct: 121 KQEYETLRRRLESYFQMVKQA 141

[Close]

BLAST of Cla022197 vs. NCBI nr
Match: gi|449461335|ref|XP_004148397.1| (PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X1 [Cucumis sativus])

HSP 1 Score: 278.5 bits (711), Expect = 6.7e-72
Identity = 137/144 (95.14%), Postives = 138/144 (95.83%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           MDSNLL RQVAYTKRC FEQGYLDRDQFTQLEELQDD NPNFAEEIVSLFYNDSARLIRS
Sbjct: 1   MDSNLLHRQVAYTKRCLFEQGYLDRDQFTQLEELQDDTNPNFAEEIVSLFYNDSARLIRS 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQTM SKPTDFEKLDN MHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGC RSFQ+V
Sbjct: 61  IEQTMASKPTDFEKLDNDMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCTRSFQQV 120

Query: 121 KQEHEILKKKLDTYFQLVRQAGKG 145
           KQEHEILKKKLDTYFQLVRQAGKG
Sbjct: 121 KQEHEILKKKLDTYFQLVRQAGKG 144

[Close]

BLAST of Cla022197 vs. NCBI nr
Match: gi|778671991|ref|XP_011649724.1| (PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X2 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 1.7e-67
Identity = 129/137 (94.16%), Postives = 131/137 (95.62%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           MDSNLL RQVAYTKRC FEQGYLDRDQFTQLEELQDD NPNFAEEIVSLFYNDSARLIRS
Sbjct: 1   MDSNLLHRQVAYTKRCLFEQGYLDRDQFTQLEELQDDTNPNFAEEIVSLFYNDSARLIRS 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQTM SKPTDFEKLDN MHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGC RSFQ+V
Sbjct: 61  IEQTMASKPTDFEKLDNDMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCTRSFQQV 120

Query: 121 KQEHEILKKKLDTYFQL 138
           KQEHEILKKKLDTYFQ+
Sbjct: 121 KQEHEILKKKLDTYFQV 137

[Close]

BLAST of Cla022197 vs. NCBI nr
Match: gi|659089561|ref|XP_008445576.1| (PREDICTED: histidine-containing phosphotransfer protein 4-like [Cucumis melo])

HSP 1 Score: 233.0 bits (593), Expect = 3.2e-58
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 1


Query: 20  QGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRSIEQTMVSKPTDFEKLDNYM 79
           QGYLDRDQFTQLEELQDD NPNFAEEIVSLFYNDSARLIRSIEQT+ SKPTDFEKLDNYM
Sbjct: 10  QGYLDRDQFTQLEELQDDTNPNFAEEIVSLFYNDSARLIRSIEQTLASKPTDFEKLDNYM 69

Query: 80  HQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEVKQEHEILKKKLDTYFQL 138
           HQFKGSSSSIGANRVTDACSQFREYCLAGNLEGC+RSFQ+VKQEHEILKKKLDTYFQ+
Sbjct: 70  HQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCMRSFQQVKQEHEILKKKLDTYFQV 127

[Close]

BLAST of Cla022197 vs. NCBI nr
Match: gi|778671994|ref|XP_011649725.1| (PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X3 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 4.3e-55
Identity = 115/144 (79.86%), Postives = 117/144 (81.25%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           MDSNLL RQVAYTKRC FEQGYLDRDQFTQLEELQDD NPNFAEEIVSLFYNDSARLIRS
Sbjct: 1   MDSNLLHRQVAYTKRCLFEQGYLDRDQFTQLEELQDDTNPNFAEEIVSLFYNDSARLIRS 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQT+                       IGANRVTDACSQFREYCLAGNLEGC RSFQ+V
Sbjct: 61  IEQTI-----------------------IGANRVTDACSQFREYCLAGNLEGCTRSFQQV 120

Query: 121 KQEHEILKKKLDTYFQLVRQAGKG 145
           KQEHEILKKKLDTYFQLVRQAGKG
Sbjct: 121 KQEHEILKKKLDTYFQLVRQAGKG 121

[Close]

BLAST of Cla022197 vs. NCBI nr
Match: gi|731384806|ref|XP_010648281.1| (PREDICTED: histidine-containing phosphotransfer protein 4-like [Vitis vinifera])

HSP 1 Score: 204.9 bits (520), Expect = 9.4e-50
Identity = 98/142 (69.01%), Postives = 120/142 (84.51%), Query Frame = 1


Query: 1   MDSNLLQRQVAYTKRCFFEQGYLDRDQFTQLEELQDDANPNFAEEIVSLFYNDSARLIRS 60
           M+ N LQRQVAY +R  F+QGYLD +QF QLE+LQDDANPNF EEIV+LFY DSARLI +
Sbjct: 1   MERNPLQRQVAYMRRSLFDQGYLD-EQFVQLEDLQDDANPNFVEEIVTLFYTDSARLIHN 60

Query: 61  IEQTMVSKPTDFEKLDNYMHQFKGSSSSIGANRVTDACSQFREYCLAGNLEGCIRSFQEV 120
           IEQ + S+P DF +LD+YMHQFKGSSSSIGA +V + C+QFRE+C A + EGC+R+FQ+V
Sbjct: 61  IEQALESRPLDFIRLDDYMHQFKGSSSSIGAKKVKNECTQFREHCSARSAEGCVRTFQQV 120

Query: 121 KQEHEILKKKLDTYFQLVRQAG 143
           KQEH IL++KL+TYFQL RQAG
Sbjct: 121 KQEHTILRRKLETYFQLARQAG 141

The following BLAST results are available for this feature:

BLAST of Cla022197 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PHP5_ORYSJ	1.5e-39	54.93	Pseudo histidine-containing phosphotransfer protein 5 OS=Oryza sativa subsp. jap...	[more]
AHP4_ARATH	8.2e-38	62.39	Histidine-containing phosphotransfer protein 4 OS=Arabidopsis thaliana GN=AHP4 P...	[more]
PHP2_ORYSJ	7.0e-37	52.82	Pseudo histidine-containing phosphotransfer protein 2 OS=Oryza sativa subsp. jap...	[more]
PHP1_ORYSJ	9.1e-37	57.72	Pseudo histidine-containing phosphotransfer protein 1 OS=Oryza sativa subsp. jap...	[more]
AHP1_ARATH	1.6e-28	45.71	Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 P...	[more]

BLAST of Cla022197 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLW8_CUCSA	4.6e-72	95.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373410 PE=4 SV=1	[more]
A5ATK8_VITVI	6.5e-50	69.01	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008201 PE=4 SV=1	[more]
F6H360_VITVI	6.5e-50	69.01	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g00210 PE=4 SV=...	[more]
A0A067GJJ9_CITSI	1.9e-49	66.67	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g032249mg PE=4 SV=1	[more]
V4UNH8_9ROSI	9.4e-49	65.96	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009825mg PE=4 SV=1	[more]

BLAST of Cla022197 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461335\|ref\|XP_004148397.1\|	6.7e-72	95.14	PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X1 [Cucum...	[more]
gi\|778671991\|ref\|XP_011649724.1\|	1.7e-67	94.16	PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X2 [Cucum...	[more]
gi\|659089561\|ref\|XP_008445576.1\|	3.2e-58	94.92	PREDICTED: histidine-containing phosphotransfer protein 4-like [Cucumis melo]	[more]
gi\|778671994\|ref\|XP_011649725.1\|	4.3e-55	79.86	PREDICTED: histidine-containing phosphotransfer protein 4-like isoform X3 [Cucum...	[more]
gi\|731384806\|ref\|XP_010648281.1\|	9.4e-50	69.01	PREDICTED: histidine-containing phosphotransfer protein 4-like [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008207	Sig_transdc_His_kin_Hpt_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

Vocabulary: **Molecular Function**
Term	Definition
GO:0004871	signal transducer activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0008152	metabolic process
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0044424	intracellular part
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0009927	histidine phosphotransfer kinase activity
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004871	signal transducer activity
molecular_function	GO:0032440	2-alkenal reductase [NAD(P)] activity
molecular_function	GO:0043424	protein histidine kinase binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU57183	watermelon EST collection version 2.0	transcribed_cluster
WMU79281	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022197	Cla022197.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU57183	WMU57183	transcribed_cluster
WMU79281	WMU79281	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008207	Signal transduction histidine kinase, phosphotransfer (Hpt) domain	GENE3D	G3DSA:1.20.120.160		coord: 20..136 score: 5.8
IPR008207	Signal transduction histidine kinase, phosphotransfer (Hpt) domain	PFAM	PF01627	Hpt	coord: 45..127 score: 1.
IPR008207	Signal transduction histidine kinase, phosphotransfer (Hpt) domain	PROFILE	PS50894	HPT	coord: 39..141 score: 13
IPR008207	Signal transduction histidine kinase, phosphotransfer (Hpt) domain	unknown	SSF47226	Histidine-containing phosphotransfer domain, HPT domain	coord: 19..140 score: 1.7
None	No IPR available	PANTHER	PTHR28242	FAMILY NOT NAMED	coord: 1..142 score: 5.3
None	No IPR available	PANTHER	PTHR28242:SF12	SUBFAMILY NOT NAMED	coord: 1..142 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla022197	Cla97C08G155240	Watermelon (97103) v2	wmwmbB100
Cla022197	Csa2G373410	Cucumber (Chinese Long) v2	cuwmB107
Cla022197	ClCG08G012100	Watermelon (Charleston Gray)	wcgwmB400
Cla022197	CSPI02G22070	Wild cucumber (PI 183967)	cpiwmB112
Cla022197	Cucsa.161120	Cucumber (Gy14) v1	cgywmB289
Cla022197	CmaCh12G002380	Cucurbita maxima (Rimu)	cmawmB148
Cla022197	CmoCh12G001930	Cucurbita moschata (Rifu)	cmowmB134
Cla022197	Lsi08G010700	Bottle gourd (USVL1VR-Ls)	lsiwmB465
Cla022197	Cp4.1LG07g02420	Cucurbita pepo (Zucchini)	cpewmB782
Cla022197	CsGy2G021800	Cucumber (Gy14) v2	cgybwmB105
Cla022197	MELO3C030319.2	Melon (DHL92) v3.6.1	medwmB300
Cla022197	CsaV3_2G030700	Cucumber (Chinese Long) v3	cucwmB121
Cla022197	Bhi04G000714	Wax gourd	wgowmB311

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla022197	Watermelon (97103) v2	wmwmbB084
Cla022197	Wax gourd	wgowmB600
Cla022197	Watermelon (97103) v1	wmwmB076
Cla022197	Cucumber (Gy14) v1	cgywmB565
Cla022197	Cucurbita maxima (Rimu)	cmawmB751
Cla022197	Cucurbita moschata (Rifu)	cmowmB746
Cla022197	Wild cucumber (PI 183967)	cpiwmB208
Cla022197	Melon (DHL92) v3.5.1	mewmB307
Cla022197	Melon (DHL92) v3.5.1	mewmB354
Cla022197	Watermelon (Charleston Gray)	wcgwmB088
Cla022197	Cucumber (Chinese Long) v2	cuwmB209
Cla022197	Cucurbita pepo (Zucchini)	cpewmB099
Cla022197	Bottle gourd (USVL1VR-Ls)	lsiwmB291
Cla022197	Cucumber (Gy14) v2	cgybwmB196
Cla022197	Melon (DHL92) v3.6.1	medwmB352
Cla022197	Silver-seed gourd	carwmB0058
Cla022197	Cucumber (Chinese Long) v3	cucwmB217