Cla022075 (gene) Watermelon (97103) v1

Overview
NameCla022075
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAuxin response factor (AHRD V1 ***- D2NUD7_9BRYO); contains Interpro domain(s) IPR010525 Auxin response factor
LocationChr8 : 20137356 .. 20138919 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTATCAGTGGTATTCTGGAATAAGAGTGAAAATGCCTTTGGAGACGGAGGATTCTTTGAAGACGCAATGGTATCAAGGGACTGTAACCTCAGCGTCTGTTCCTGCCCATGGGCCTTGGAAGGGTTCTCCATGGCGTATGCTTGAGGTAAACATTTCCTTTGTTAACCCATGTCTCTAATTCCACGTGTGTAGGAGCTAGCTTTCATATCTACTTTTGAATGGTTTTTTTTTTCTTTCCTTTGATAATTGAATCTAGCTTCATTCGATTGTCTGAGTCTGTTGATCGTTTTGTTTGTACCTAGCTTTAGTTTATGTTTTCAAACTCAACATGACAATCAGTGACGAGAAATTGGATGGGATCAAACTATTTTTAGTATTTGTATTAAATTCTCTGGTTCTTATCGAGGGAGAGAAAAAAACACAGATACTAAAAATGTGTTGGAGCCTCTCACTCTAGGTAATTTCATTCTTGATGTTTTGATGGTTCCACCCTTTGAAAGATGCTGACATTTTTAATCGTATATATTTTCTTATTAAGAAGTAGTCTCTAATTTTATTTTAGTTTTAAGACAGAGAACTGGATTTATAATTTATGAGTATTTTCAATTACTCCCTCATTGTTGAAATGTGTAGCTCTGTTGGGTTATATATCAAGGCTTTGGTGGTTGAGACAGGTCTTAAACAATTGATTTAGTCGGATGACTTTGGAGTGTTCCTGTTATATATGCATACCAGATAACAAGCCGATCAAACATTAAGAGAATGGAAATGAGATTTGTTGATGTAATCAGATGACTATGGGTGTTGCTTAAAATGGGGTGGTCTTCATTAGATCTTTTCCCTTCTGTCAGTTAGGGATTTACATTTCGTGTGGTTTTTAGAAGTTGTTTTGTCTTTACCAGCATTTATCATCATCATCATTATTATTTTCATATTATTTCATTTTTCTGTCTTAGGTTACATGGGAAGAAACTGATGCTCTGCAGAGTGCTAAGTATGTGAGCCCTTGGGAAGTTGAACTTGCTACACCCACTCCTCCAATACCCTCTCCTCTCCACCCAGCAAAGAAATTTAGAGGTCCCCAGAAATCTGGGATGGTGAATGGTGAAGCAGATCTGTTTTCACCTATGATGAGATTCGGTGATTCAACAATGGGGCAATTCAACCCATCATTTTTGAGTTTTAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAATATTTTCTGTGAATCGGGTTTATTCAATCCATATAATGAAATTACTCCACCATCGTGTGATGAAAATTCCATGTGCAAACTGAATCCAGCGCCAATGACACAAACGGTGTCTACTGACCTCCAAATTGGTAGTGCGCAATCGGATACCTTATCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTTGCCACAGGAACGGCTGAGAACCATACCTGCAACTCAACTAAAGCTGGAGTCAATTCATTTCAATTGTTTGGTCAAGTTATATATACGAATCTGCCGGTTGAAAATGGACGTGACAGTTGTGCTAACAATGATGGTGGTGACAATAAGCGTTAG

mRNA sequence

ATGAATTATCAGTGGTATTCTGGAATAAGAGTGAAAATGCCTTTGGAGACGGAGGATTCTTTGAAGACGCAATGGTATCAAGGGACTGTAACCTCAGCGTCTGTTCCTGCCCATGGGCCTTGGAAGGGTTCTCCATGGCGTATGCTTGAGGTTACATGGGAAGAAACTGATGCTCTGCAGAGTGCTAAGTATGTGAGCCCTTGGGAAGTTGAACTTGCTACACCCACTCCTCCAATACCCTCTCCTCTCCACCCAGCAAAGAAATTTAGAGGTCCCCAGAAATCTGGGATGGTGAATGGTGAAGCAGATCTGTTTTCACCTATGATGAGATTCGGTGATTCAACAATGGGGCAATTCAACCCATCATTTTTGAGTTTTAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAATATTTTCTGTGAATCGGGTTTATTCAATCCATATAATGAAATTACTCCACCATCGTGTGATGAAAATTCCATGTGCAAACTGAATCCAGCGCCAATGACACAAACGGTGTCTACTGACCTCCAAATTGGTAGTGCGCAATCGGATACCTTATCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTTGCCACAGGAACGGCTGAGAACCATACCTGCAACTCAACTAAAGCTGGAGTCAATTCATTTCAATTGTTTGGTCAAGTTATATATACGAATCTGCCGGTTGAAAATGGACGTGACAGTTGTGCTAACAATGATGGTGGTGACAATAAGCGTTAG

Coding sequence (CDS)

ATGAATTATCAGTGGTATTCTGGAATAAGAGTGAAAATGCCTTTGGAGACGGAGGATTCTTTGAAGACGCAATGGTATCAAGGGACTGTAACCTCAGCGTCTGTTCCTGCCCATGGGCCTTGGAAGGGTTCTCCATGGCGTATGCTTGAGGTTACATGGGAAGAAACTGATGCTCTGCAGAGTGCTAAGTATGTGAGCCCTTGGGAAGTTGAACTTGCTACACCCACTCCTCCAATACCCTCTCCTCTCCACCCAGCAAAGAAATTTAGAGGTCCCCAGAAATCTGGGATGGTGAATGGTGAAGCAGATCTGTTTTCACCTATGATGAGATTCGGTGATTCAACAATGGGGCAATTCAACCCATCATTTTTGAGTTTTAACTCTTTTCCTGCTGGCATGCAGGGAGCCAGGCAAAATATTTTCTGTGAATCGGGTTTATTCAATCCATATAATGAAATTACTCCACCATCGTGTGATGAAAATTCCATGTGCAAACTGAATCCAGCGCCAATGACACAAACGGTGTCTACTGACCTCCAAATTGGTAGTGCGCAATCGGATACCTTATCGCCTGATAGTCAGGCTAGTGTTCTTTCCTTTGCCACAGGAACGGCTGAGAACCATACCTGCAACTCAACTAAAGCTGGAGTCAATTCATTTCAATTGTTTGGTCAAGTTATATATACGAATCTGCCGGTTGAAAATGGACGTGACAGTTGTGCTAACAATGATGGTGGTGACAATAAGCGTTAG

Protein sequence

MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQSAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMVNGEADLFSPMMRFGDSTMGQFNPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDLQIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDSCANNDGGDNKR
Homology
[Close]
BLAST of Cla022075 vs. Swiss-Prot
Match: ARFQ_ARATH (Auxin response factor 17 OS=Arabidopsis thaliana GN=ARF17 PE=2 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 9.9e-39
Identity = 96/241 (39.83%), Postives = 132/241 (54.77%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           M+  W  G RVKM +ETEDS +  W+QG V+S +    GPW+GSPW+ L++TW+E + LQ
Sbjct: 308 MSMYWTPGTRVKMAMETEDSSRITWFQGIVSS-TYQETGPWRGSPWKQLQITWDEPEILQ 367

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSG--MVNGEADLFSPMMRFGDSTMGQ 120
           + K V+PW+VE+A     + +P  PAK+ + PQ  G  +   + ++  P      +    
Sbjct: 368 NVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGEILYPQSGLSSAAAPD 427

Query: 121 FNPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEI--TPPSCDENSMCKLNPAPMTQTVS 180
            +PS  S+++FPAGMQGARQ  F   G FNP   I   PP    N+   L+P P    VS
Sbjct: 428 PSPSMFSYSTFPAGMQGARQYDF---GSFNPTGFIGGNPPQLFTNNF--LSPLPDLGKVS 487

Query: 181 TD-LQIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVEN 237
           T+ +  GS  SD LSP+S  + LS       N    S K  VNS QLFG++I      E+
Sbjct: 488 TEMMNFGSPPSDNLSPNSNTTNLSSGNDLVGNRGPLSKK--VNSIQLFGKIITVEEHSES 540

[Close]
BLAST of Cla022075 vs. Swiss-Prot
Match: ARFV_ORYSJ (Auxin response factor 22 OS=Oryza sativa subsp. japonica GN=ARF22 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.8e-25
Identity = 79/215 (36.74%), Postives = 102/215 (47.44%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           M  QW SG+R KM  ETEDS +  W+ GT++S  V     W  SPWR+L+VTW+E D LQ
Sbjct: 322 MRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVTWDEPDLLQ 381

Query: 61  SAKYVSPWEVELATPTPPIP-SPL-HPAKKFRGPQKSGMVNGEADLFSPMMRFGDSTMGQ 120
           + K VSPW VEL +  PPI   P   P KK R P        E  L +P+  F  + +G 
Sbjct: 382 NVKCVSPWLVELVSSIPPIHLGPFSSPRKKLRVPPHPDF-PFEGHLLNPI--FHGNPLGP 441

Query: 121 FNPSFLSF-NSFPAGMQGARQNIF----------------CESGLFNPYNEITPPSCDEN 180
            N     + ++ PAG+QGAR   F                  SG FN  + ITPPS    
Sbjct: 442 SNSPLCCYPDTAPAGIQGARHAQFGLPLTDHQLNKLHLGLLHSGSFNRLDAITPPSRISK 501

Query: 181 SMCKLNPAPMTQTVSTDLQIGSAQSDTLSPDSQAS 197
               ++ AP    +S  L I + Q    S D + +
Sbjct: 502 GFV-VSSAPAHDNISCLLSISTPQVAEKSDDRKTT 532

[Close]
BLAST of Cla022075 vs. Swiss-Prot
Match: ARFP_ARATH (Auxin response factor 16 OS=Arabidopsis thaliana GN=ARF16 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.3e-24
Identity = 84/265 (31.70%), Postives = 119/265 (44.91%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           M   W SG+R KM  ETEDS +  W+ GTV++ +V     W  SPWR+L+V W+E D LQ
Sbjct: 313 MRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVAWDEPDLLQ 372

Query: 61  SAKYVSPWEVELATPTPPIP--SPLHPAKKFRGPQK---SGMVNGEADLFSPMMRFGDST 120
           + K V+PW VEL +   PIP  S   P KK R PQ    + ++N       P+  F  + 
Sbjct: 373 NVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNLINS-----IPVPSFPSNP 432

Query: 121 MGQFNPSFLSFNSFPAGMQGARQNIFCESGL----FNPYNEITPPSCDENSMCKLNPAPM 180
           + + +P     ++ P G+QGAR N     GL     + Y    PP     S  +L+P+  
Sbjct: 433 LIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPPPPPSSLQLSPSLG 492

Query: 181 TQTVSTDLQIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNL 240
            + + T  + G                 F   T     CN TK+  +   LFG++I    
Sbjct: 493 LRNIDTKNEKG-----------------FCFLTMGTTPCNDTKSKKSHIVLFGKLILPEE 552

Query: 241 PV-ENGRDSCAN------NDGGDNK 250
            + E G    AN      + GG N+
Sbjct: 553 QLSEKGSTDTANIEKTQISSGGSNQ 555

[Close]
BLAST of Cla022075 vs. Swiss-Prot
Match: ARFJ_ORYSI (Auxin response factor 10 OS=Oryza sativa subsp. indica GN=ARF10 PE=3 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-22
Identity = 91/264 (34.47%), Postives = 116/264 (43.94%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           M  QW  G+R KM  ETEDS +  W+ GTV          W  SPWR+L+VTW+E + LQ
Sbjct: 314 MAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQ 373

Query: 61  SAKYVSPWEVELATPTP--PIPSPLHPAKKFRGPQKSGM-VNGE---ADLFSPMMRFGDS 120
           + K V PW VEL +  P   +PS   P KK R P  + + + G+     +F P     D 
Sbjct: 374 NVKRVCPWLVELVSSMPNLHLPSFSPPRKKPRNPPYAELPLEGQIFTGPVFPPNPMAHDH 433

Query: 121 TMGQFNPSFLSF---NSFPAGMQGARQNIFCES------GLFNP----YNEITPPSCDEN 180
                 P FL F   ++ PAG+QGAR   F         G   P    Y  I  P  D  
Sbjct: 434 HHHHGFP-FLPFPDSSAQPAGIQGARHAQFASPFPEFHIGNLQPNLMLYAGIRLPPADRA 493

Query: 181 SMCKLNPAPMTQTVSTDLQIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQ 240
           +     P P    +STDL IGS       PD  A      + ++     + TK     F 
Sbjct: 494 APA---PRPPRIIISTDLTIGSPG----KPDDAA-----CSPSSGGKKIDDTKP--RGFL 553

Query: 241 LFGQVIYTNLPVENGRDSCANNDG 246
           LFGQ I T   ++NG     N+DG
Sbjct: 554 LFGQAILTEEQIKNG-----NSDG 557

[Close]
BLAST of Cla022075 vs. Swiss-Prot
Match: ARFJ_ORYSJ (Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10 PE=2 SV=3)

HSP 1 Score: 105.5 bits (262), Expect = 8.4e-22
Identity = 91/264 (34.47%), Postives = 116/264 (43.94%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           M  QW  G+R KM  ETEDS +  W+ GTV          W  SPWR+L+VTW+E + LQ
Sbjct: 314 MAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQVTWDEPELLQ 373

Query: 61  SAKYVSPWEVELATPTP--PIPSPLHPAKKFRGPQKSGM-VNGE---ADLFSPMMRFGDS 120
           + K V PW VEL +  P   +PS   P KK R P  + + + G+     +F P     D 
Sbjct: 374 NVKRVCPWLVELVSSMPNLHLPSFSPPRKKPRNPPYAELPLEGQIFTGPVFPPNPMAHDH 433

Query: 121 TMGQFNPSFLSF---NSFPAGMQGARQNIFCES------GLFNP----YNEITPPSCDEN 180
                 P FL F   ++ PAG+QGAR   F         G   P    Y  I  P  D  
Sbjct: 434 HHHHGFP-FLPFPDSSAQPAGIQGARHAQFASPFPEFHIGNLQPNLMLYAGIRLPPADRA 493

Query: 181 SMCKLNPAPMTQTVSTDLQIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQ 240
           +     P P    +STDL IGS       PD  A      + ++     + TK     F 
Sbjct: 494 APA---PRPPRIIISTDLTIGSPG----KPDDAA-----CSPSSGGKKIDDTKP--RGFL 553

Query: 241 LFGQVIYTNLPVENGRDSCANNDG 246
           LFGQ I T   ++NG     N+DG
Sbjct: 554 LFGQAILTEEQIKNG-----NSDG 557

[Close]
BLAST of Cla022075 vs. TrEMBL
Match: A0A0A0LJV3_CUCSA (Auxin response factor OS=Cucumis sativus GN=Csa_2G315390 PE=3 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-115
Identity = 205/250 (82.00%), Postives = 222/250 (88.80%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +NYQWY GIRVKMP+ETEDSLKTQWYQGTVTSASVP  GPWKGSPWRMLEVTWEETDALQ
Sbjct: 295 LNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQ 354

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMVNGEADLFSPMMRFGDSTMGQFN 120
           SAK+VSPWEVELA+P+PPIP PLH AKK+R PQKSGMVN EADLFSPMMRFGDSTMGQFN
Sbjct: 355 SAKFVSPWEVELASPSPPIPPPLHSAKKYRIPQKSGMVNAEADLFSPMMRFGDSTMGQFN 414

Query: 121 PSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDLQ 180
            S ++FNSFPAGMQGARQ  F ESG  NP+NEI+PP+ DENSM KLN AP TQTVSTDL 
Sbjct: 415 RSLMNFNSFPAGMQGARQIFFRESGSSNPHNEISPPTSDENSMLKLNTAPNTQTVSTDLH 474

Query: 181 IGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDSC 240
           IGS QSDTLSPDSQASVLSFATGTAEN +CNSTKAGVNSFQLFGQ+IYT+ P EN  D+ 
Sbjct: 475 IGSVQSDTLSPDSQASVLSFATGTAENQSCNSTKAGVNSFQLFGQIIYTSPPAENELDNG 534

Query: 241 ANNDGGDNKR 251
           A++D GD KR
Sbjct: 535 ADSDDGDKKR 544

[Close]
BLAST of Cla022075 vs. TrEMBL
Match: M5XYJ1_PRUPE (Auxin response factor OS=Prunus persica GN=PRUPE_ppa003136mg PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.7e-64
Identity = 127/250 (50.80%), Postives = 168/250 (67.20%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +N  W +G+RVKM +ETEDS +  W+QGT++S S+P +GPW+ SPWRML+VTW+E + LQ
Sbjct: 314 LNVFWSAGMRVKMSVETEDSSRMTWFQGTLSSVSIPDNGPWQRSPWRMLQVTWDEPEVLQ 373

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMV-NGEADLFSPMMRFGDSTMGQF 120
           +AK VSPW+V+    TP I +   PAK+FR P   G++ N E + F P+    +STMGQ 
Sbjct: 374 NAKRVSPWQVDYVASTPSIHTAFPPAKRFRAPMSPGLLTNAEEEFFFPVPGAPNSTMGQS 433

Query: 121 NPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDL 180
           N S L++N+FPAGMQGARQ+++C S L +  +E TP  C  NS    N  P  + VST+L
Sbjct: 434 NASLLNYNTFPAGMQGARQDLYCVSNLSHLLSENTPQMCPYNSFGN-NVVPKLKRVSTEL 493

Query: 181 QIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDS 240
            IGS+QSD LS DSQ+SV SF T    N  CNSTK G +SFQLFG++I+ N PVE G D 
Sbjct: 494 NIGSSQSDELSLDSQSSVHSFGTELDGNRYCNSTKVGRSSFQLFGKIIHMNQPVEGGFDD 553

Query: 241 CANNDGGDNK 250
               +   NK
Sbjct: 554 VGCTEDNGNK 562

[Close]
BLAST of Cla022075 vs. TrEMBL
Match: A0A067KCM5_JATCU (Auxin response factor OS=Jatropha curcas GN=JCGZ_12025 PE=3 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 3.1e-63
Identity = 126/250 (50.40%), Postives = 167/250 (66.80%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +N  W +G+RVKM +ETEDS +  W+QGT+ SA+    GPW+GSPWRML++TW+E + LQ
Sbjct: 305 LNVFWTAGMRVKMAMETEDSSRMTWFQGTIASAAAADCGPWRGSPWRMLQITWDEPEVLQ 364

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSG-MVNGEADLFSPMMRFGDSTMGQF 120
           +AK VSPW+VE   PTPP+ +   PAKKFR P+ SG +++GE +LF PM    +STM   
Sbjct: 365 NAKKVSPWQVEFIAPTPPLHAAFPPAKKFRYPENSGLLIDGEGELFFPMSGLTNSTMENM 424

Query: 121 NPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDL 180
           N S L++N+FPAGMQGARQ+ F   GL N  +E       +N+       P  QTVST+L
Sbjct: 425 NHSLLNYNTFPAGMQGARQDPFSAFGLSNFLSENASQMSTDNAFGN-KMVPKLQTVSTEL 484

Query: 181 QIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDS 240
            IGS+ SD LSPDSQ+S+ SF T    N   NS+K G++SFQLFG++I  N PVE+G D 
Sbjct: 485 NIGSSHSDNLSPDSQSSMHSFGTELVGNQCSNSSKVGISSFQLFGKIIRMNQPVESGFDD 544

Query: 241 CANNDGGDNK 250
            +  D   NK
Sbjct: 545 VSYIDDYGNK 553

[Close]
BLAST of Cla022075 vs. TrEMBL
Match: B9RJC5_RICCO (Auxin response factor OS=Ricinus communis GN=RCOM_1033160 PE=3 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 7.6e-62
Identity = 124/233 (53.22%), Postives = 164/233 (70.39%), Query Frame = 1 

Query: 5   WYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQSAKY 64
           W +G+RVKM +ETEDS +  W+QGT+ SAS+P  G W+GSPWRML+V W+E + LQ+AK 
Sbjct: 322 WSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQVAWDEPEVLQNAKR 381

Query: 65  VSPWEVELATPTPPIPSPLHPAKKFRGPQKSG-MVNGEADLFSPMMRFGDSTMGQFNPSF 124
           VSPW+VE  +P+PP+     PAKKFR P+ SG + +GE +LF PM    +STMG  N S 
Sbjct: 382 VSPWQVEYVSPSPPLHGAFPPAKKFRFPENSGFLTDGEGELFFPMSGLTNSTMGNINQS- 441

Query: 125 LSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDLQIGS 184
           L+++SFPAGMQGARQN F   GL N ++E T   C +N        P  +TVST+L IGS
Sbjct: 442 LNYHSFPAGMQGARQNPFSVYGLSNFFSEDTSHLCSDNVFGN-KMVPKLKTVSTELNIGS 501

Query: 185 AQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENG 237
           + S+ LSPDSQ+S+ S  T    N  CNSTKAG++SFQLFG++I+ + PVE+G
Sbjct: 502 SPSENLSPDSQSSIHSCDTELVGNPGCNSTKAGISSFQLFGKIIHMSQPVESG 552

[Close]
BLAST of Cla022075 vs. TrEMBL
Match: A0A0K0LGA3_9ROSI (Auxin response factor OS=Dimocarpus longan GN=ARF17 PE=2 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 8.4e-61
Identity = 124/249 (49.80%), Postives = 167/249 (67.07%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           M   W +G+RVKM  ETEDS +  W+QGTV+ AS+P  GPW GSPWRMLEVTW+E + L 
Sbjct: 287 MKIFWTAGVRVKMVTETEDSSRVTWFQGTVSDASMPTTGPWCGSPWRMLEVTWDEPEILL 346

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMV-NGEADLFSPMMRFGDSTMGQF 120
           + K VSPW++E  + + P+ +P   AK+ + PQ SG+V +GE D+FSP+    +STMGQ 
Sbjct: 347 NVKRVSPWQLEFVSSSLPLHTPFPSAKRLKFPQNSGLVTDGEEDIFSPLRGLTNSTMGQM 406

Query: 121 NPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDL 180
           NPS L+ N+FP GMQGARQN      L N  +E T  +C EN+   +N  P  + V T+L
Sbjct: 407 NPSSLNCNTFPVGMQGARQNTNSIFSLSNFISENTHQTCTENT-TGINIVPKLKNVCTEL 466

Query: 181 QIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRD- 240
            +GS+ S+ LSPDS +S  SF+T    N  CNS+K G +SFQLFG++I+ N PVE+G D 
Sbjct: 467 NMGSSPSENLSPDSHSSAYSFSTELG-NQGCNSSKIGASSFQLFGKIIHMNQPVESGFDD 526

Query: 241 -SCANNDGG 247
            +C  +DGG
Sbjct: 527 VACVEDDGG 533

[Close]
BLAST of Cla022075 vs. NCBI nr
Match: gi|659089165|ref|XP_008445361.1| (PREDICTED: auxin response factor 17 [Cucumis melo])

HSP 1 Score: 435.6 bits (1119), Expect = 5.7e-119
Identity = 210/250 (84.00%), Postives = 224/250 (89.60%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +NYQWY GIRVKMP+ETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ
Sbjct: 294 LNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 353

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMVNGEADLFSPMMRFGDSTMGQFN 120
           SAK+VSPWEVELA+P+PPIP PLH AKK+RGPQKSGMVN EADLFSPMMRFGDSTMGQFN
Sbjct: 354 SAKFVSPWEVELASPSPPIPPPLHSAKKYRGPQKSGMVNSEADLFSPMMRFGDSTMGQFN 413

Query: 121 PSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDLQ 180
            S LSFNSFPAGMQGARQN F ESG FN YNEI+PP+ DENSM KLN  P TQTVSTDL 
Sbjct: 414 QSLLSFNSFPAGMQGARQNFFRESGSFNAYNEISPPTSDENSMFKLNTVPKTQTVSTDLH 473

Query: 181 IGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDSC 240
           IGS QSDTLSPDSQASVLSFATGTAEN +CNSTKAGVNSFQLFGQ+IY + PVE   D+ 
Sbjct: 474 IGSVQSDTLSPDSQASVLSFATGTAENQSCNSTKAGVNSFQLFGQIIYMSPPVEKEIDNG 533

Query: 241 ANNDGGDNKR 251
           A++D GD KR
Sbjct: 534 ADSDDGDKKR 543

[Close]
BLAST of Cla022075 vs. NCBI nr
Match: gi|449466452|ref|XP_004150940.1| (PREDICTED: auxin response factor 17 [Cucumis sativus])

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115
Identity = 205/250 (82.00%), Postives = 222/250 (88.80%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +NYQWY GIRVKMP+ETEDSLKTQWYQGTVTSASVP  GPWKGSPWRMLEVTWEETDALQ
Sbjct: 295 LNYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQ 354

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMVNGEADLFSPMMRFGDSTMGQFN 120
           SAK+VSPWEVELA+P+PPIP PLH AKK+R PQKSGMVN EADLFSPMMRFGDSTMGQFN
Sbjct: 355 SAKFVSPWEVELASPSPPIPPPLHSAKKYRIPQKSGMVNAEADLFSPMMRFGDSTMGQFN 414

Query: 121 PSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDLQ 180
            S ++FNSFPAGMQGARQ  F ESG  NP+NEI+PP+ DENSM KLN AP TQTVSTDL 
Sbjct: 415 RSLMNFNSFPAGMQGARQIFFRESGSSNPHNEISPPTSDENSMLKLNTAPNTQTVSTDLH 474

Query: 181 IGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDSC 240
           IGS QSDTLSPDSQASVLSFATGTAEN +CNSTKAGVNSFQLFGQ+IYT+ P EN  D+ 
Sbjct: 475 IGSVQSDTLSPDSQASVLSFATGTAENQSCNSTKAGVNSFQLFGQIIYTSPPAENELDNG 534

Query: 241 ANNDGGDNKR 251
           A++D GD KR
Sbjct: 535 ADSDDGDKKR 544

[Close]
BLAST of Cla022075 vs. NCBI nr
Match: gi|645256414|ref|XP_008233939.1| (PREDICTED: auxin response factor 17 [Prunus mume])

HSP 1 Score: 254.2 bits (648), Expect = 2.3e-64
Identity = 127/250 (50.80%), Postives = 168/250 (67.20%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +N  W +G+RVKM +ETEDS +  W+QGT++S S+P + PW+ SPWRML+VTW+E + LQ
Sbjct: 317 LNVFWSAGMRVKMSVETEDSSRMTWFQGTLSSVSIPDNRPWQRSPWRMLQVTWDEPEVLQ 376

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMV-NGEADLFSPMMRFGDSTMGQF 120
           +AK VSPW+V+    TP I +   PAK+FR P   G++ N E + F P+    +STMGQ 
Sbjct: 377 NAKRVSPWQVDYVASTPSIHTAFPPAKRFRAPMSPGLLTNAEEEFFFPVPGAPNSTMGQL 436

Query: 121 NPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDL 180
           N S L++N+FPAGMQGARQ+++C S L +  +E TP  C  NS    N  P  + VST+L
Sbjct: 437 NASLLNYNTFPAGMQGARQDLYCVSNLSHLLSENTPQMCTYNSFGN-NVVPKLKRVSTEL 496

Query: 181 QIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDS 240
            IGS+QSD LSPDSQ+SV SF T    N  CNSTK G +SFQLFG++I+ N PVE G D 
Sbjct: 497 NIGSSQSDELSPDSQSSVHSFGTELDGNRYCNSTKVGRSSFQLFGKIIHMNQPVEGGFDD 556

Query: 241 CANNDGGDNK 250
               +   NK
Sbjct: 557 VGCTEDNGNK 565

[Close]
BLAST of Cla022075 vs. NCBI nr
Match: gi|596286890|ref|XP_007225689.1| (hypothetical protein PRUPE_ppa003136mg [Prunus persica])

HSP 1 Score: 252.7 bits (644), Expect = 6.8e-64
Identity = 127/250 (50.80%), Postives = 168/250 (67.20%), Query Frame = 1 

Query: 1   MNYQWYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQ 60
           +N  W +G+RVKM +ETEDS +  W+QGT++S S+P +GPW+ SPWRML+VTW+E + LQ
Sbjct: 314 LNVFWSAGMRVKMSVETEDSSRMTWFQGTLSSVSIPDNGPWQRSPWRMLQVTWDEPEVLQ 373

Query: 61  SAKYVSPWEVELATPTPPIPSPLHPAKKFRGPQKSGMV-NGEADLFSPMMRFGDSTMGQF 120
           +AK VSPW+V+    TP I +   PAK+FR P   G++ N E + F P+    +STMGQ 
Sbjct: 374 NAKRVSPWQVDYVASTPSIHTAFPPAKRFRAPMSPGLLTNAEEEFFFPVPGAPNSTMGQS 433

Query: 121 NPSFLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDL 180
           N S L++N+FPAGMQGARQ+++C S L +  +E TP  C  NS    N  P  + VST+L
Sbjct: 434 NASLLNYNTFPAGMQGARQDLYCVSNLSHLLSENTPQMCPYNSFGN-NVVPKLKRVSTEL 493

Query: 181 QIGSAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDS 240
            IGS+QSD LS DSQ+SV SF T    N  CNSTK G +SFQLFG++I+ N PVE G D 
Sbjct: 494 NIGSSQSDELSLDSQSSVHSFGTELDGNRYCNSTKVGRSSFQLFGKIIHMNQPVEGGFDD 553

Query: 241 CANNDGGDNK 250
               +   NK
Sbjct: 554 VGCTEDNGNK 562

[Close]
BLAST of Cla022075 vs. NCBI nr
Match: gi|1009136571|ref|XP_015885595.1| (PREDICTED: auxin response factor 17 [Ziziphus jujuba])

HSP 1 Score: 251.9 bits (642), Expect = 1.2e-63
Identity = 131/247 (53.04%), Postives = 167/247 (67.61%), Query Frame = 1 

Query: 5   WYSGIRVKMPLETEDSLKTQWYQGTVTSASVPAHGPWKGSPWRMLEVTWEETDALQSAKY 64
           W +G+RVKM +ETEDS +  W+QGTV++AS P +GPW+GSPWRML+VTW+E + LQ+AK 
Sbjct: 332 WSAGMRVKMAMETEDSSRMTWFQGTVSTASPPDNGPWRGSPWRMLQVTWDEPEVLQNAKR 391

Query: 65  VSPWEVELATPTPPIPS-PLHPAKKFRGPQKSGMV-NGEADLFSPMMRFGDSTMGQFNPS 124
           VSPW+VE    TPP+ +    PAK+FR P  SG++ +GE ++F PM    +ST+ Q N S
Sbjct: 392 VSPWQVEFVASTPPLQTCGFPPAKRFRAPLNSGLLTDGEGEVFFPMTGAANSTIEQLNAS 451

Query: 125 FLSFNSFPAGMQGARQNIFCESGLFNPYNEITPPSCDENSMCKLNPAPMTQTVSTDLQIG 184
            LS+N+FPAGMQGARQ +F  S L N  +E T  S   NS    N  P  +TVST+L IG
Sbjct: 452 LLSYNTFPAGMQGARQELFSVSSLSNLLSETTRMSA-YNSFGN-NVVPKLKTVSTELNIG 511

Query: 185 SAQSDTLSPDSQASVLSFATGTAENHTCNSTKAGVNSFQLFGQVIYTNLPVENGRDSCAN 244
           S+QSD LSPDSQ+S+ SF T    N  CN TK G N+FQLFGQ+I   LP ENG D    
Sbjct: 512 SSQSDNLSPDSQSSIRSFGTEFVGNQYCNPTKVGKNTFQLFGQIINVPLPAENGFDDVGC 571

Query: 245 NDGGDNK 250
            +G   K
Sbjct: 572 TEGNGIK 576

The following BLAST results are available for this feature:
BLAST of Cla022075 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARFQ_ARATH9.9e-3939.83Auxin response factor 17 OS=Arabidopsis thaliana GN=ARF17 PE=2 SV=1[more]
ARFV_ORYSJ4.8e-2536.74Auxin response factor 22 OS=Oryza sativa subsp. japonica GN=ARF22 PE=2 SV=1[more]
ARFP_ARATH5.3e-2431.70Auxin response factor 16 OS=Arabidopsis thaliana GN=ARF16 PE=2 SV=1[more]
ARFJ_ORYSI8.4e-2234.47Auxin response factor 10 OS=Oryza sativa subsp. indica GN=ARF10 PE=3 SV=2[more]
ARFJ_ORYSJ8.4e-2234.47Auxin response factor 10 OS=Oryza sativa subsp. japonica GN=ARF10 PE=2 SV=3[more]
BLAST of Cla022075 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJV3_CUCSA1.2e-11582.00Auxin response factor OS=Cucumis sativus GN=Csa_2G315390 PE=3 SV=1[more]
M5XYJ1_PRUPE4.7e-6450.80Auxin response factor OS=Prunus persica GN=PRUPE_ppa003136mg PE=3 SV=1[more]
A0A067KCM5_JATCU3.1e-6350.40Auxin response factor OS=Jatropha curcas GN=JCGZ_12025 PE=3 SV=1[more]
B9RJC5_RICCO7.6e-6253.22Auxin response factor OS=Ricinus communis GN=RCOM_1033160 PE=3 SV=1[more]
A0A0K0LGA3_9ROSI8.4e-6149.80Auxin response factor OS=Dimocarpus longan GN=ARF17 PE=2 SV=1[more]
BLAST of Cla022075 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659089165|ref|XP_008445361.1|5.7e-11984.00PREDICTED: auxin response factor 17 [Cucumis melo][more]
gi|449466452|ref|XP_004150940.1|1.7e-11582.00PREDICTED: auxin response factor 17 [Cucumis sativus][more]
gi|645256414|ref|XP_008233939.1|2.3e-6450.80PREDICTED: auxin response factor 17 [Prunus mume][more]
gi|596286890|ref|XP_007225689.1|6.8e-6450.80hypothetical protein PRUPE_ppa003136mg [Prunus persica][more]
gi|1009136571|ref|XP_015885595.1|1.2e-6353.04PREDICTED: auxin response factor 17 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010525Auxin_resp
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0009725response to hormone
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048856 anatomical structure development
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0007275 multicellular organism development
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009725 response to hormone
biological_process GO:0044763 single-organism cellular process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0044699 single-organism process
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla022075Cla022075.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010525Auxin response factorPFAMPF06507Auxin_respcoord: 1..49
score: 6.2
NoneNo IPR availablePANTHERPTHR31384FAMILY NOT NAMEDcoord: 1..239
score: 8.3
NoneNo IPR availablePANTHERPTHR31384:SF19AUXIN RESPONSE FACTOR 17coord: 1..239
score: 8.3