Cla022060 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla022060
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	DNA gyrase subunit A family protein (AHRD V1 **** D7L923_ARALL); contains Interpro domain(s) IPR013760 DNA topoisomerase, type IIA, central
Location	Chr8 : 19959384 .. 19972929 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCTTCTTCTGGACTCCGCATCTCTTCCCTGCTTCGCCATCAGCTCGCTCCACCTTCCGTGTCCAATCGTTTCGTTAGAATCTGCCATGGGTTGTCAGAGCTTCGCTTTCTATCTACCAGGAATTTCACATCCACCAGGCCCATCCGGTTGGCGAAATCCCGGCGCAGAGACGAGCCTGTGAAAGAGGAAGGGGCCGAGGGGCAGGATGAAAATGGCAGTGTAATCGTGAAGGATAGAGGTGGGAGTGATGGAAGGATTGTTCATGCAGAGCTTCACAAGGAGGCTACTGATGCTTACATGGCTTATGCAATGTCCGTGTTGCTCGGCCGTGCATTGCCAGATGTTCGCGATGGTTTGAAGCCTGTCCACCGCCGGATTTTGTTAGTCATTTTCCCTCAAGCTTGTTGCTTACATTATTTTGCATAGCTGCTGATGAAAATGAGGACAATGTAATTTATGCTAGGCCTCCATCTCTATTGAATTTCATCAGGTTTTTTTTAATAATCTTATTTTAATTAGAAACTATTTTAGTGATAGAATGAATATATCCAAAGAAATTTCATCGGTCTGTTTTTGAAGTACTATCTTTCATGCTTATCTCTTTCACCAATTTACCGGCAGTTTATGTTTCTCTTGTTCATTACATCAGTATGCACGAAACTATATTCGTCTGAGATTATGTTTGAATGCTGTTATGCCAAACGGATAGTTCTTGAAACTTTGCACATAGACACGAGAACCTCCGAGATGCCCCTAGAGTTGTTGAATGGAGAGAGTTAGAGACTAGAAACTTCATAATTAAGATATCACCTTTCTCACTGGGTTACTTATGTAGCGGGAGTTAGGTTAGTTGTGAATATATGGAAGAGAGGGGATATTTTTTTTTTCTTTTGATGAAAGAAGAGGGAATTTTTCAAACCGTCAAACCAGTACTTATTTTATTTTATTTTTGAAACAGGAAAACAAAAGCATTATTTGATTGATAAATAAATTATATATAAAAATGGATTAGAACAGCTTTTTAGTTTTTGGGCAGGGACACACAGTCTATAGAAGATATGCCCCATAAGCATTGATTTCATTGACATTCCTCTCTTGAGATATGATAACCCCTCAAATCTACAATGGATAAGAAGTATTGCACGTAGTCAAACCATCCTACAAATCCACAATGGCTTGTGCATTCAAGTAAATATTGGAACAAGAATAATTAATAGCTGTATTGACTTGCATATAGTTGTTTTCGCCTATGGTGGGAAATAACGTCTCTATAGATCTGCTGCATATAGTTGAAGTAAAAATAATCAATAGCTATTTTGACCTGCGGTAAAACTTTTGGCTACAGGTTTGCCATGCATGAATTGGGCCTCTCATCAAGAAAACCATTTAAGAAATGCGCAAGAGTTGTTGGAGAGGTTAAATATACGTTTACTCTATGAAGAATTGAGTTCATTTCTCCCTTTAATCACGCTTTATTATCTCTATATCCAACTATGATTTTTTATTCTCTTAACAGGTTTTAGGTAAGTTTCATCCGCATGGAGATACTGCTGTGTATGATTCGCTTGTTAGAATGGCTCAGGTAACAGGAAAGATTGTCATTAACTTAAAAAAGAATTTTTTTTATATGAAATATGTAGTAACCTTGAATATATACAATGGACGAAGAAGAAGTATAATGGTCCCAATGATCCAAAACGGACCCATTAGGTTTAAGTGCAATTCTAAATAAACTTGGGAAGCAGAATTTTAAAGGAGTATTATCAATCCAAGGGTCAATGCAAAATCCAATTCTACTTCTGCTTCCAAGTTTGTAAATTGCCAAAGCTTCAACTTTCAACCAAGTTCTTGAGATATTAATCCATGGACTTCGAAGACTAAGGTTTACCTTTCCTGATGTGTGCCAGTTGAACAAACTCCTCCCATGAATACTCATCACGACTTGACCTCATAGGGAATTTTCCTCCTTTGTCTTCACGCCCATTTTGCCAGTGCCAAATTTCTCGCTCTTAGCCCACCAAAACCAAGCCCTCCATCCTCCTGAGCCTTAGTGACAAGCTCCCATTTCACCAAATGATTCATTTTCCCCCTTTGTGCCATTCCCAAAAGAAATTCTTCATACTTCTCTCGACGACTAAGAGAACTTTTTCTGGCATAAAAAATGAAGACATATAGTAAGTAGGTAAGCTAGAGAGAACTGACTTTCGTAGTGTTGCTTTTCCTCCTCTAGAGAGATTATATCTTCTCCACTTATCTAACTTTCCTTGTATCTTATCAATAACTGATTGCCAGAAAGAGACTTTTTTAGGGTATCCACCCAAAGGTAAACCAAGGTACATGAAAGGAAGTCATTCAATCTTACAAAGAAGCCTTGCAACCATTAAGGACAACTTATTGTCTTCAATATTAATCCCGCAAAGAGCTGATTTCTCCCAATTAATTTTCTGGCTAGAGCACCATTCAAAAATTTCAAGAGTTCTCTTCAAATTCTCAACCATTTCCTCATCATCCTTACAAAACAGCAGGGTGTCATCGGCAAACTATAGAATGGATACATGAACCCTATCTTTCTCCACCATAAAACCTTCATATTTCCCTTTTTCATAGATTCTGGCAATTAAAGCATTTAGCACCTCACTAACTAAGAGGAATAGAAAAGGAGAAAGGGGATCCCCTTGTCTAATAACTCTAGTAGCAAGAATTCTCCCTCTTGATCTTCCATTTATGAATATAGAGAACTTTGGGTTAGAGATGCAACCCATAATCCAGGAAATCCAGCGTGTGTAAAAAATTTTCCTTTGTAGAACTTTCTCTAGAAAAATTCAATCCACTCTATCAAAGACTTTTTCTTTAATGAATGCAGTTTGAGTAGGTGCGATTATGCTGGCATAATTCTTTTAAGCCTTTCTGCTAGAACTTTTGCTATTATCTTATAGACCATAGCGGTTAGGCTAATGGGTCTAAAGTCCTTAACCAACACTGCATCCTCTTTTTTCTATATCAAGCAAATAAAATTTTCTTTGCGACAAGAATTTAACTTTCCATTATCGTAGAAGTCCTCAAAGAGCGTCATGATTTTATCTTTTAGCAAGTCCCAGAATTTGATAAAGAATTATTTTGTAAAACTATCCGGTCCAGGAGCTTTATTCTTACCCAATTCTTTCACTGTCTTTTTAATTTCACTTGGAGTAAAGCTAGCCACAAGCAACTTGTTTTGTTCTCTTGAAACAGACCCATCTAAATTCAAAGGAACAGATCTGGTTCATACTGATTTTGAGTAAAGGGATGAGTAAAAACCCAAAATTAGATCTTCTGTTTCATGGAAGGGTTTAGTTAGCAATCCTTGGTCATTAATCAACCATTTTTCTCTTTTTTGTTGCTAAAAATTGGTGGAAAAAAGCTGTGTTTTCGTCCCCCAAATTCAGCCAATTTAGTTTACTTTTCTGCATTAAGTTTCTTTCATCCATTCGATAAATGGACAGTAATTTTGCCTTCAATGAAATTCTTGTGTCTTCTTCCAATGGAGGAGCTTCTATGAGTTCGGAAGAATCAGCTTCATGATCTCCTCTTTCAATTTCTTTCAACAAATACTCATCCCTACTTTTCTTGTTCTTTTCGAATTCAGGTAGCCATCTTTTCAAGGTGACTTTTAAGTTTCTTAGTTTGGTGGAGACAACAAAACCAGCCCAACCATGCTGTCCATCAACCTCCAATGTCCTTTCAATCAAACGACAACACTCCTAATTTTTCAACTAACTATTACAAAATCTAAATGGTGCTGGCCTCCATTCAAAAGCTCCGCTTCAAACAGTAGTGGCAAATGATCGAGCATGGTGCGCGCTTGCGTTGCCACTCTTGAGTTCTCAAAAAATTCATCCCAATTATTAGAGACAAAAAAATTTGTCGATAGAGATTTTGATACCATCGATCCTTCCCCCGAACCATTGGAAAGAGGAATTTCCAACAAATTCGAGTCACAAATGAATTTGTTGAATTTTCTCATGCCTTTTGTTATTCTACCCAATGGATAACACTCCCGTCTTTGGCGTGTGATGTTGAAATCACCTCTAATGCACCAAGGCTCTGTACAATGTTTGGATAGCGAAGACAATTTTGTCCAAAGATTACTCCTTTCTCTATAATCAGTAGGGCCATAAACATTTGTTCTCCAACATACTTTCTTGCAAATTGTGGAACATTTTAGTGACAATGAATAGTCACCTTTAAGCACTTCCAACACAACAATCTTCCCCTCATCCCACATGGATAAAATCCCACCAGACCTTCCACTTGCTCCCACAAATGCCCATCCAATATCTTTAGAGCTCCATAGATTTTTTATGAAGCCTCTATCAAAATTGGCTCACTTTGTTTCTTGAATTAAAACAAGGTCCGAATTTACTTTTTAAAAAAATCTTTCTTGTGCCAATCTCTTTGTCATATCTCCAAGTCCTCTTATATTCCATGAAATAATCTTCACTAAGGAATAGTCGAATACCTGAATTGTTGAATACACAATGACTGGCTTTCAAGCTACCATCCTTGATCAACCAAGGATGATTTCACAATCTTCCAGGAGCGGATGCAACTTTTGAGGGATAACTTCCTTATTAAGAGGTGGGATTGAAACATCTTCCAACATGTTTGACTCTTGAGCTTCCTCCACTTGAAACAACTGGCCCAAGTCTTTTATGAACTTCTCCAAATCCTCGCCCTCCATATGATTTTCGTTGACTTCAAGGTCGCCAAACTCTTCACTACTTGCACTTGCTATCGACTCCTCATCGGATTCATGTGATCTGGAACGTTTAATGGATGGCGTGTTGCTTGGAATACCTCGCACAAAATTTATATTTGAGCCAGGTACTCTAAATTATGATTGAATAAAGGGACTACTTTGAGAATTTAATACACTTGACCTGTCTGATATGATGCCAGGAATTTGGATTTTAACACAACATTCTTCAAGAAGGTTCGAATTTGCAATTACTACCCATGAATTGAGATAAGAAGTCCTTTTCCTGGCGAAATGCTTGGGATATGGCTTCAATAGGTGGGCACGTCTCTTGGGTGTTGAAGGACAATTTTTTCCTTTGTCCTATTTTGACACCAAATTCGAAGGGAAGATACTCGACTTGGGCTGTTTATCTTCCACAGCCTGTCCTTAAGAGAGACACTTACGGCTGCTCGATTCCATTGTATCATTAATACAAAAGTCGACTGATTTTGATTCATTAATCGAGTAGCGAAATTATTGGAGATTGCTTGGATCAAGGTGCGTGTGGGACTATCTCTTCTGATTGTAGAAGGCCAATTGTCAATGGTTGCTTCAAGAACCACGTTTTTAATCTTTTGAAATTCCTTTGGGTTAATAATAATAGATTCTTTTTTGATACCTTTGTTCGTGCCAACAAAGGGAGGGACTGTTTGACTTCCTTTGCATGGATGGCTATTAATGCCAACCTCTCTTCTCATTAAATTAATATATGTGTTCATATTGAACTGGTTAGGAAAGCTGTTGGTGTGTTCTTCCAGCTGCGGCTGATCTTTTGATGCCGACTGAAAGCTCTGACGTTTCTCAGTGAACTCTGCATCCAAGTTTTTCCTTGGACTGCCGATGATCTAGTCACATAAGGATTTCTTTTCAAAGTTTAGTGAGTTTCCAGCATTCTCAAGAAAGACCCACCCTGGACTTAAGAAGGATCCTTCTATTTCTTCATCTTTCATAACTTGATTTAAACGAACTAAATCAATTGGGCTGGAAAAGCCTTAACAGATTGCCCTTAACAAACTTCAGAGGACCCAAAATTTCTACATCACCATAATTCAAAAAAATGCTACCTCGGTTCTCATCAGTAATTTCTATAGTAGCAGGTATAAAACCGCATAAATTCTTTTTAACTTGAATTTTGACTTCTGCTACGTTGAGATGATTCAATGTTTCATTTGAGATTGATTCTAGCCCTCCAAAATACGCCCTATGGCTTCAAACATTTTCCTTCACCAGTACTCCAATGGAAGGTTCTTAATTGAGATCCAACCTCCATAACCTTTCATCAAACTTGGACGATTGTGTGTGAATATGTTCCATCTTTCAAACTTCAGATGGAAATCACCATATTCATGCCATTTATTTGGTTGGATAATTATATCTTCCAAGTTCCTTTGATCTACTTTCGTTAAGGCATTCTACGCGAACAGGGGATTGATAATAACATCAGATTTGAAATAAGACTTTAACATGCTTGCAATCTCAGTCCAATCATTGAACTCAAAAAGTCTTGATACTATCCAAAGGTTACTAAAATCTTCTTTGAATACTTCACCATTTTTGTGCACTCAAAACTGCTGCCTGCTTTGTTTAACCGGTGCTTGAATAAGGGAGGCCTTCCGGCCACTGTTATTTCCTTCATCCATGCTTCGTTTTTTGATCGGTAGAACATAGTATTTTGTTACTCACATTGTGTAATCTTATGTAAAACTGGCATGAATCTTTGCTTGGAAGTCTTTTCTAGACTGTCTTTCAACTTCAAAAATTCTCTGAGCATATATGCTCAGAGCAAAAGACTGTCACCCCTAAGTTGAGTCTCCCATTGGGACGTGGACGAAACACCTACCCCCTGAAGAGCGCCATACTACACATCTCATTAGCCAACCGTATGATGTGTATAGTTTAGACAACTTTGTTGCGCTATACCCGTCTCTACTCTTTCTTTCATAAAAACTCGATGATGAGCTATTGGACAAATCTGATATAATTTCCAAACCAAATAACTTGCGTCTTTGAGAGGACTATCTTTTTTCTGGCTTCCATGTCTTTAATAAAGAATTTCCTAGATTCAAACCATATACAAAAATGAGCTTCATTCACTGAACAACTTTTTTACTTCCATGGCTTTCTCTGTTAGACTTGCGAGCTTAGTAAGAAGCTGGATGAGACGACAAACGACGGTGTTGACCGGAAGAGCAAGACTCGACAGATGACGTTATTGAATGGAGGGATGACAAGAAGGAAGACGAGGGGGAGAGCATACTTACCTTAGTTTGACATTGTAAGGGAGTGGATTGTTAGATTAAATTTCACTATTCAAGAAAAAATTTGTATCAATGAAATGGAAGCAATTAAGAAGTGGCAAGAAAAAAAATTGGAAAGGAGGTCTCTATCTTTGATCACTTGCCCCATTGCTAGCGCTCCGTGGTCTCTTTTCTACAAGGTTTTGGTTGGCAATGACCCCTCCCCACAACATTCACAGGACTCTCTCTTCTTTGACGATCTTGAGGTTGCATGTTCAAATCTTCGAGTGGGTTTAATAAGGAAAATCCTTGATGACCAACTAATTTGACTTGACAAGTTGAGATGCTTCCCCTAGGTTGAGACAAAGCAACCTAATAAGGCATGTATCTAGTTTCATGATTTGAGATTCGAGTATAACGAATGTAGGCATGGAGACACCTTAACAGAACAAGATGGCAAACCAAAGTTGGGGTCATTTTGACCAAGTCCATGATGATTGTCGAACTTAAATTTTTTTATTAAGTTCTTGCTTTGCTTTTCCCCCTCTCTACAAGTTATTCTAGTTCTTTGGGCTTTTACTGCTGAATGGTTGCTGATCACTTTTTTATTTTCCTTCATATTTTTGAAGGAACCAACAGTTTCATTGATCAAATAAAGCTACAAAAGGGAGACCTATCCTTGATTATTATAATTTTTTGTCACTTCTGCTCATAGTTTTAGTTCTGATTCTCATAGTCTCATGCTTTTTACAGGATTTCTCTTTAAGGTGCCCACTCATCCAAGGCCATGGAAATTTTGGTTCCATTGATGCAGATCCTCCTGCTGCCATGCGGTATACTGAGTGCAGATTGGAAGTACGTTTACATATGTTTGCTTTTTTAGAGAATTCAGTTGTTTGAAGATATGAAAAACCATTTTGTCAGGCCTCAGTTACCTACTTTTCCTAAACAAATAAAACTCAACCCCCTGTTTGTCTCTGGGAAAGTATAAAGAAAATCATCATAGAAAGTAGAGTAGTTGTCTAACGATTAAAAGCCATATTTTTTTCTTGAGTTTTTTCCCACATTTTGTTCAAATTTCTTTAATTTCTGAAAACCGTCAATCTTTTTGTCATAATTGTTGTATAGGATAAAAAATGTCTGATCGGGCATAAAGCATATGTGTTTGCTTGCTGGCCTGTTGGATTAAATTTTTATGATTTATCAATGAACTCCCATGGTTTGTTTTTTTGGCTCACAATTGTTAATAATTCGCAAGGTAGGGGTGTAGGAACTTGAGATGTGTGGAAATTTGCGCCAAGGTCTTGGTTCAAACAATTTGGTGTAAAATTTTATCATTTAGAATTTGGTTGTCTCTGAAGTTGGTCTTGATGTGTGTGAAGGAACCTCTTCGGGGATTAATGGATTACTAGCTTAAATGGAAACTTTGATTCATTACATGTTTCCTTACAAAATTGGATGCTCATCATGTGTTAGATTTCTGATCCTGTAGGCACTTACAGAAGCAATGTTGTTGTCTGACTTAGAGCTGAATACGGTTTGTTCTATATCTTACATTTGTTTCTAAGTTATTCATTTTTTCTTCTGTCAATATATTTTTAATATGTTTTTTTTTACTTGTGTAGGTTGATTTTGTTCCAAATTTTGATAATTCCCAAAAGGAACCTTCACTTCTACCGGCTCGGCTCCCAACTTTGCTGCTGAATGGTTCCTCAGGGATTGCGGTGATCCATCTGAGTTTTCTTTATTTTTCCCCCTTCTATTTTTTTCTTGAAAAGGAAAATTCCCCCCCCCCCCCCCCCCCTTTCTTTTGACATTCTAATTTAGAGATAAATGGTTTCAGGTTGGAATGGCAACCAATATTCCACCGCATAATCTTGGCGAGTTAGTAGATGCACTCTGTGTTCTTATTCATAATCCGGAGGCTACAGTGAGTACTAACTCTCTTCCTAGATATTCCTTTTTGAAAAATGACTTCTTGTTCTTGTCTTCCTGAATGTTTGTTATGAGTAGTGTGTGATGAACCGCATGCTATATTACTGTTGCACAATAGATTGTGGAAAATGAGCCTAGTTCGGGAGGACTTCATTGGAAGGAGTAACATGGAATTACCTCTGCAGTTTTGGGAGGATTTTAATATCAGACTACCATAAGCCAGATATAAGAAATAGTTTGTATCTTTAGTAACACTGGTTAAGAAGTATTATGTTAAATTACAATTTCAGTCCTTAATTTTTTATATTTGTGTCTAATAGGTTTCTAAACTTTAAAAAAGTATCTATTAGGTCCCTTCACTTCCATTTTTTGTCTTATAGGTCATTGAATTTTAAAGACGTCAAAGAAATCCTTGAATTTTTAATTTTGTGTTATTAGGTTTTGGCATGTTCATCATTTCTTAAAATTAACAATTCTATTAGAACAATTTTGTGTTGAATAAGTTCGTAAAATTTCAAAGAAACGTTTGATCGGTCAATCAATTATAAGTATAAAATTGAAAGTTCAAAAACTTGTTAGGTACGAATTTGTAAGTATAAAATTGAAAGATAGATCTATTAGTCACTTTTTAAATTTAAGAAATCTATTTGACACAGACTCGAGAGTTTAAGGATTGAACTTGTAATTTAACTTTTAATTTATAGTAGAATAGAAAACATTATGGCTGGCTTTAAACATATTTTTCTTTGGATTCTTCAGTGTGAACAAATGGGATAATTTTTAGGGACTTGTCCTGAAATTTTGGTGATTTGTATTAATTGTATTTTATGCTCTATACTGGTGCAAAATTATACCTTTTTTTGATCATTATAGTCTTACTACTGCAATTTCTAATTGGAAAGCTTTATTGTAATACACCTTTTAGTGTTTTTGGGAGTTTTTCCTCCCCATTTCATTCAATAGTGAAATTGTTTCCTTTTCTAAAATATTTATAATAGGGTAGAATGCAGATGATATAATATAATTTTTTCTAGATTTAAATCACATTTCCATGAACTAAGTTTAAAGTTGTATATTTAACAAATATGGAATTAACCATCATGGTCTAGTGGTAAAAAGGAGACATAGTCTCAATAAATGACTAAGAGGTTAAAGATTCAATCCATAGTGGCCACCTACCTATGAATTAATTTCCTACGAGTTTCTTTGACAACCAAATGTTGCATTTGTAGGGTCAGGTGGGTTATCCAAAGAAAAAAAAAACAAATATTGAATTTTGTATATTTATTTATTTTTTTGAGTATTTGGAAATTAACATGTGAATAATTTCATTGGAAATATGTTTCATTTTTTTCTTCATAGTAGTCAACCTAGGCAAAGGCATTAAACTCTTCTAATGTGGGAGTTCAATCTATTATTGTGCATTGCTCATTTCTTCTTTGCAAGTTCATTAGCTTTATTTTGCTTTGTTAAAGTTGCAAGAATTGTTGGAATACATGCCTGGACCTGACTTTCCGACTGGAGGATTAATTATGGGAAACAATGGGTAAGATTTAGTTTCTTATTCCCTTTTTTGAACAATTTTTTATTCCATTTCTTCTGTCACACTTATCCCCTTCCGGTCCCACTAAAAAAGAAGCCTCATCTAGGATATCTATGACAACCTTTTTAGTCTACATGCATTCTAAAATTCTTTTTTTTGCCTTCCATTTTCTTATGGAGCAAAATATCATAATCACTTCAAGAGTTTTAGTGCTTGTTAATTAATTAATTAATTAATTAATTGTTTTTAAAATTTTAAATCTCTAATTGTCCCTCTAATTGTCCCTCCAATTGCTTGCCATCTCTCCATGGATGTTTTTTTTGAAAAGGAAACAACACTTTCTCCATGCATTTTAAAGTTTTATGTTCTGTTATATTGGGAAGTTAGAAAGAAAATGGAGAAAGACACGAGGATGAAGTGGTCTTTCAATTGAAAAGGTAATTTCAAATCATCTTTATTTTCTAAGAATTTTATCTTTTCGTTTTGAAAAAGCAAAAAGTTTCTAAAAATGAAATTGTTTCCCATAGAATAAATATCTTTTTGTTCTCAAAAAACAAACTTTCTCCATTCCAATTAGCAATTTGTAAAATGTAAGCTACCTGAAACTAGCCTCAGAAATATCCTTTTATATTTATTGTTGATTTGCTTCTTAAGGTCATCTTAATAGTTGTTTATATTGTCAAGTATTCTAGAGGCATATCGAACTGGACGTGGACGCATTACAGTTAGGGGGAAAACTGACGTTGAACTGCTTGATTTAAAAACTAAACGAACTGCCGTTATTATAAAAGAGGTGACTATCATGGCGTTTCTGTATAGTTTGCTGGAATTATCTGCTTTAACATGTATTCTTTTCAAAGGTGGAATTTTTAGCAAATTAGAAAGTGGCTTTTTTAAATGGAATGCAGGTACCTTACCAAACAAATAAATCTGCTTTGGTGGAGAAGATAGCGGAACTTGTGGAGAACAAGGTAATACTGTGAGGAAAGATATATTACCCCATGTTTATCTGTATATTAGTTGGGTGAAAATTAATCGATATAATCATTTTCCATTTTTTATTATATATGTTTGTGTGCCCCCCACCCCCACCCCCACCCCACCAGTCTTTCTCTTAGGTCATATTAGATTGATATTAATACCATTCTGTGTTTTTTTTTTATCTTGTTGAGCAATAAATTTAGGAAATGTTTTTATTTATTTATAAATATATCATGATGGTCGATATGTGCCTTTATTATTTATTTATATTATGGCAGTCAATTTGAAACAACATTTCTCCCTTTATATGTATCATGGTTGCCGATTGCTTTAGTAGCACATGCCACATCCAAGAATTTGGTTAAGGGTTATGTATTGGGGGATGGATCCATTAACATTCATCACCTTAGATTTACATTTGCTGATGACACCGTCCTATTTACTTCTTATGAAGAAAGGGGAAGGGCCGTACAAAATTTTTTCAACACTGTCAAGGTGGTCTTTCAAAAGGCTTTGGGGCTCAATATTAATTACGAAATATTGGAGATAGGACATCATTGGTGTCAATATGGATTCGCAATCAGTTGAACATATTGCCAATATGTTTGGTTATAAAGTGGCACATGACCTAATACCTATCTTGGCCTTGTGGCCCTTACCTTGAATATCCTCGGGCACTATCCTTTTGGGGCCCGATTATTGAGAAGATTGACAGAAGGCTCCAATCTTGGAATAACTCACACATTTGCAAGGGAGGAAGACTTACACTCATTCTAGCCACATTATCCAAACTACCAATCTACTACATCTCTCTTTTCAATATGCCGATTATACACTCACATGTCGGAGAAAAGAGAAGAAATACTATAGGAGGAAAATAGAGATAGTTTTTCTTTTTCTTTTCCTTGTTTTCTCCCCTGTCCTTTTGTACCAAAATCAATTTCTTTCGATCCAAGCCGACCACAAAAAAGCACAAGATTCTTCCAAACGATCTCCTTTTCTTTGAAAGGATGGTTGAAAAGGAGCAAATTAAGAAGAATGCAAGTCTTCTTCGGAAGACCACCAGCCAGTTGGTCTTCCATTTTGAGAATGAAAGCTACTAAGTTTCTAAGTCAGCTATTGTGTGGTATAAATTAAACTTGTCCTAATCATGTTGTAAGTCATCATATCTGGTTGCCTGTAGTTTAATTTATTGTTTGTTTAATATTTTAAATGTCCTTATTTTTATGAACAGACACTGGATGGTATAGGTGACATTAGGGACGAGAGTGATCGGTCTGGAATGCGGATTGTAATTGAGGTAAAAATTTTGTTGCATATTATACTTTTATTATCAGTATGACCTGTTAAAATATCTTGCAATTTCTACACAGAATATTAAACTCCTACAAAGTTCTTGGCAACCAATTTTTGTAAAGTCGAAAGGTTGTTGAGATTAGTCCAGGCGTACAACCTAGACACTCACAAATTATATTGTAATTGTTACGCCAACCAAAAAAAAGTCCTTTGCAGCTTAAAAAATGCAGTGAAGGTTAAGAGGAAAAAATTAAATTCATATGAATTGCTATGGCATGTGAATGTTTATTGCCCTAGATAATAAAGGGAGTAGACAATGAATGCTATTTAGACTGACAGATTTCTTTATTATTCTTTACAGCTTAAGCGAGGAGCAGATCCATTAATTATTCAGAATAATTTATATCGTCTTACATCTCTTCAGTCTAGTTTTAGTTGCAATATGGTGGGGTGAGTGGATTGTCCTTACAGCTAACTTGTTATCCTTTACATTTTCATTAATATCTTCTTATTATAACTTATAAGATATTTACTTTAATTGCTTTGCTGATTACTATTCCATATAATATGATTACATTTGATGAAAAATTTGTGTAGTTTTCATTCTGAAGTTTGAATTAGTTTAATGCTTATCTAAAATCCTCTAGAATGATTATATTTAGGGTTGGCAAAAAAACCTGCGGGGCCTTGACCCGATCGGGTCGGGGAATCTCCGGTTTGATCGGGGACATTCTCTGGGTACCCTTTCGGGGACAGGGCGGGGATGGGTAG

mRNA sequence

ATGGCCTCTTCTTCTGGACTCCGCATCTCTTCCCTGCTTCGCCATCAGCTCGCTCCACCTTCCGTGTCCAATCGTTTCGTTAGAATCTGCCATGGGTTGTCAGAGCTTCGCTTTCTATCTACCAGGAATTTCACATCCACCAGGCCCATCCGGTTGGCGAAATCCCGGCGCAGAGACGAGCCTGTGAAAGAGGAAGGGGCCGAGGGGCAGGATGAAAATGGCAGTGTAATCGTGAAGGATAGAGGTGGGAGTGATGGAAGGATTGTTCATGCAGAGCTTCACAAGGAGGCTACTGATGCTTACATGGCTTATGCAATGTCCGTGTTGCTCGGCCGTGCATTGCCAGATGTTCGCGATGGTTTGAAGCCTGTCCACCGCCGGATTTTGTTTGCCATGCATGAATTGGGCCTCTCATCAAGAAAACCATTTAAGAAATGCGCAAGAGTTGTTGGAGAGGTTTTAGGTAAGTTTCATCCGCATGGAGATACTGCTGTGTATGATTCGCTTGTTAGAATGGCTCAGGATTTCTCTTTAAGGTGCCCACTCATCCAAGGCCATGGAAATTTTGGTTCCATTGATGCAGATCCTCCTGCTGCCATGCGGTATACTGAGTGCAGATTGGAAGCACTTACAGAAGCAATGTTGTTGTCTGACTTAGAGCTGAATACGGTTGATTTTGTTCCAAATTTTGATAATTCCCAAAAGGAACCTTCACTTCTACCGGCTCGGCTCCCAACTTTGCTGCTGAATGGTTCCTCAGGGATTGCGGTTGGAATGGCAACCAATATTCCACCGCATAATCTTGGCGAGTTAGTAGATGCACTCTGTGTTCTTATTCATAATCCGGAGGCTACAACACTGGATGGTATAGGTGACATTAGGGACGAGAGTGATCGGTCTGGAATGCGGATTGTAATTGAGCTTAAGCGAGGAGCAGATCCATTAATTATTCAGAATAATTTATATCGTCTTACATCTCTTCAGTCTAGTTTTAGTTGCAATATGGTGGGGGTTGGCAAAAAAACCTGCGGGGCCTTGACCCGATCGGGTCGGGGAATCTCCGGTTTGATCGGGGACATTCTCTGGGTACCCTTTCGGGGACAGGGCGGGGATGGGTAG

Coding sequence (CDS)

ATGGCCTCTTCTTCTGGACTCCGCATCTCTTCCCTGCTTCGCCATCAGCTCGCTCCACCTTCCGTGTCCAATCGTTTCGTTAGAATCTGCCATGGGTTGTCAGAGCTTCGCTTTCTATCTACCAGGAATTTCACATCCACCAGGCCCATCCGGTTGGCGAAATCCCGGCGCAGAGACGAGCCTGTGAAAGAGGAAGGGGCCGAGGGGCAGGATGAAAATGGCAGTGTAATCGTGAAGGATAGAGGTGGGAGTGATGGAAGGATTGTTCATGCAGAGCTTCACAAGGAGGCTACTGATGCTTACATGGCTTATGCAATGTCCGTGTTGCTCGGCCGTGCATTGCCAGATGTTCGCGATGGTTTGAAGCCTGTCCACCGCCGGATTTTGTTTGCCATGCATGAATTGGGCCTCTCATCAAGAAAACCATTTAAGAAATGCGCAAGAGTTGTTGGAGAGGTTTTAGGTAAGTTTCATCCGCATGGAGATACTGCTGTGTATGATTCGCTTGTTAGAATGGCTCAGGATTTCTCTTTAAGGTGCCCACTCATCCAAGGCCATGGAAATTTTGGTTCCATTGATGCAGATCCTCCTGCTGCCATGCGGTATACTGAGTGCAGATTGGAAGCACTTACAGAAGCAATGTTGTTGTCTGACTTAGAGCTGAATACGGTTGATTTTGTTCCAAATTTTGATAATTCCCAAAAGGAACCTTCACTTCTACCGGCTCGGCTCCCAACTTTGCTGCTGAATGGTTCCTCAGGGATTGCGGTTGGAATGGCAACCAATATTCCACCGCATAATCTTGGCGAGTTAGTAGATGCACTCTGTGTTCTTATTCATAATCCGGAGGCTACAACACTGGATGGTATAGGTGACATTAGGGACGAGAGTGATCGGTCTGGAATGCGGATTGTAATTGAGCTTAAGCGAGGAGCAGATCCATTAATTATTCAGAATAATTTATATCGTCTTACATCTCTTCAGTCTAGTTTTAGTTGCAATATGGTGGGGGTTGGCAAAAAAACCTGCGGGGCCTTGACCCGATCGGGTCGGGGAATCTCCGGTTTGATCGGGGACATTCTCTGGGTACCCTTTCGGGGACAGGGCGGGGATGGGTAG

Protein sequence

MASSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRDEPVKEEGAEGQDENGSVIVKDRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTSLQSSFSCNMVGVGKKTCGALTRSGRGISGLIGDILWVPFRGQGGDG

Homology

[Close]

BLAST of Cla022060 vs. Swiss-Prot
Match: GYRA_NICBE (DNA gyrase subunit A, chloroplastic/mitochondrial OS=Nicotiana benthamiana GN=GYRA PE=2 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 3.2e-110
Identity = 205/267 (76.78%), Postives = 227/267 (85.02%), Query Frame = 1


Query: 24  NRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRDEPVKEEGAEGQDENGSVIVKDRGG 83
           +RF  +    SELRFLS+      + +R   +RR++E V +EG      NGSVI++DRG 
Sbjct: 27  SRFSGLRKTSSELRFLSSVTPPPRKQLRPVSARRKEEEVGDEG------NGSVILRDRGE 86

Query: 84  SDGR-----IVHAELHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLS 143
           ++ R     +V  ELHKEAT+AYM+YAMSVLLGRALPDVRDGLKPVHRRIL+AMHELGLS
Sbjct: 87  NEDRNGGERVVLTELHKEATEAYMSYAMSVLLGRALPDVRDGLKPVHRRILYAMHELGLS 146

Query: 144 SRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSIDADPPA 203
           S+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR PLI+GHGNFGSIDADPPA
Sbjct: 147 SKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRSPLIRGHGNFGSIDADPPA 206

Query: 204 AMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVG 263
           AMRYTECRLEALTE+MLL+DLE NTVDFVPNFDNSQKEPSLLPAR+P LLLNG+SGIAVG
Sbjct: 207 AMRYTECRLEALTESMLLADLEQNTVDFVPNFDNSQKEPSLLPARVPNLLLNGASGIAVG 266

Query: 264 MATNIPPHNLGELVDALCVLIHNPEAT 286
           MATNIPPHNLGELVDAL  LIHNPEAT
Sbjct: 267 MATNIPPHNLGELVDALSALIHNPEAT 287

HSP 2 Score: 96.3 bits (238), Expect = 7.6e-19
Identity = 48/72 (66.67%), Postives = 55/72 (76.39%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+ N     L+G+ DIRDESDRSGMRIVIELKRG+DP I+ NNLYRLT+
Sbjct: 353 NKASLVEKIADLVENK---ILEGVSDIRDESDRSGMRIVIELKRGSDPAIVLNNLYRLTA 412

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMVG+
Sbjct: 413 LQSSFSCNMVGI 421

[Close]

BLAST of Cla022060 vs. Swiss-Prot
Match: GYRA_ARATH (DNA gyrase subunit A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GYRA PE=1 SV=2)

HSP 1 Score: 382.1 bits (980), Expect = 6.9e-105
Identity = 203/287 (70.73%), Postives = 229/287 (79.79%), Query Frame = 1


Query: 1   MASSSGLRISS-LLRHQLAPPSVSNRFVRICHGL-SELRFLSTRNFTSTRPIRLAKSRRR 60
           M+ SS LR+SS LLR       +++   R+     S  RF S+R   S + + +   +R 
Sbjct: 19  MSLSSTLRLSSSLLRRSFFRFPLTDPLCRLRRTEPSATRFFSSRTPRSGKFV-VGAGKRG 78

Query: 61  DEPVKEEGAEGQDENGSVIVKDRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVR 120
           DE VKEE       NG ++V    G + RIV  ELHKEAT++YM+YA+SVLLGRALPDVR
Sbjct: 79  DEQVKEESGAN---NGGLVVS---GDESRIVPFELHKEATESYMSYALSVLLGRALPDVR 138

Query: 121 DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 180
           DGLKPVHRRILFAMHELG+SS+KP+KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQ FSL
Sbjct: 139 DGLKPVHRRILFAMHELGMSSKKPYKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQSFSL 198

Query: 181 RCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPS 240
           RCPLIQGHGNFGSIDADPPAAMRYTECRL+ L EA+LLSDL+ +TVDFV NFDNSQKEP+
Sbjct: 199 RCPLIQGHGNFGSIDADPPAAMRYTECRLDPLAEAVLLSDLDQDTVDFVANFDNSQKEPA 258

Query: 241 LLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           +LPARLP LLLNG+SGIAVGMATNIPPHNLGELVD LC LIHNPEAT
Sbjct: 259 VLPARLPALLLNGASGIAVGMATNIPPHNLGELVDVLCALIHNPEAT 298

HSP 2 Score: 93.2 bits (230), Expect = 6.4e-18
Identity = 49/79 (62.03%), Postives = 56/79 (70.89%), Query Frame = 1


Query: 261 TNIPPH-NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQN 320
           T IP   N   LV  +  L+ N    TL+GI DIRDESDR+GMR+VIELKRG DP ++ N
Sbjct: 357 TEIPYQTNKATLVQKIAELVENK---TLEGISDIRDESDRNGMRVVIELKRGGDPALVLN 416

Query: 321 NLYRLTSLQSSFSCNMVGV 339
           NLYR T+LQSSFSCNMVG+
Sbjct: 417 NLYRHTALQSSFSCNMVGI 432

[Close]

BLAST of Cla022060 vs. Swiss-Prot
Match: GYRA_ORYSJ (Probable DNA gyrase subunit A, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=GYRA PE=2 SV=2)

HSP 1 Score: 335.5 bits (859), Expect = 7.4e-91
Identity = 180/273 (65.93%), Postives = 210/273 (76.92%), Query Frame = 1


Query: 17  LAPPSVSNRFVRICHGLSELRFLSTRNFTS--TRPIRLAKSRRRDEPVKEEGAEGQDENG 76
           LA  + ++R       +  +RFLS+ + +S  +R ++  ++ R      E  A G+   G
Sbjct: 23  LAAAAAASRRRAAVVAVPAVRFLSSSSSSSDGSRSVQPLRAGR-----DERAAAGE---G 82

Query: 77  SVIVKDRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHE 136
              VK+R      +V  ELHKEAT+AYMAYAMSVLLGRALPDVRDGLKPVHRRIL+AMHE
Sbjct: 83  GAAVKER------VVPVELHKEATEAYMAYAMSVLLGRALPDVRDGLKPVHRRILYAMHE 142

Query: 137 LGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSIDA 196
           +GL+SR+PF+KCARVVGEVLGKFHPHGD+AVY++LVRMAQDFS+R PL+QGHGNFGSIDA
Sbjct: 143 MGLASRRPFRKCARVVGEVLGKFHPHGDSAVYETLVRMAQDFSMRYPLVQGHGNFGSIDA 202

Query: 197 DPPAAMRYTECRLEALTEAMLLSD--LELNTVDFVPNFDNSQKEPSLLPARLPTLLLNGS 256
           DPPAAMRYTECRL+      L  D    +  VDFVPNFDNSQKEPSLLPAR+P+LLLNGS
Sbjct: 203 DPPAAMRYTECRLDVGCFFFLDIDAIFIIGQVDFVPNFDNSQKEPSLLPARVPSLLLNGS 262

Query: 257 SGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           SGIAVGMATNIPPHNLGELVD L V+I NPEAT
Sbjct: 263 SGIAVGMATNIPPHNLGELVDVLSVMIENPEAT 281

HSP 2 Score: 92.0 bits (227), Expect = 1.4e-17
Identity = 47/72 (65.28%), Postives = 53/72 (73.61%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+   E   L+GI DIRDESDRSGMR+VIELKRGADP I+ NNLYR T+
Sbjct: 347 NKSTLVERIAELV---EEKVLEGISDIRDESDRSGMRVVIELKRGADPAIVLNNLYRHTA 406

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMV +
Sbjct: 407 LQSSFSCNMVAI 415

[Close]

BLAST of Cla022060 vs. Swiss-Prot
Match: GYRA_SYNY3 (DNA gyrase subunit A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gyrA PE=3 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.6e-80
Identity = 142/202 (70.30%), Postives = 167/202 (82.67%), Query Frame = 1


Query: 84  SDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPF 143
           S  R++  +L  E + +Y+ YAMSV++GRALPD RDGLKPVHRRIL+AM+ELGL+  +PF
Sbjct: 4   SPDRLIATDLRNEMSQSYLEYAMSVIVGRALPDARDGLKPVHRRILYAMYELGLTPDRPF 63

Query: 144 KKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSIDADPPAAMRYT 203
           +KCARVVGEVLGK+HPHGDTAVYD+LVRMAQDFS+R PLI GHGNFGS+D DPPAAMRYT
Sbjct: 64  RKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMREPLIDGHGNFGSVDNDPPAAMRYT 123

Query: 204 ECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNI 263
           E RL  L+   LL D+E  TVDF+ NFD SQ+EP++LPAR+P LL+NGSSGIAVGMATNI
Sbjct: 124 ESRLRPLSTNSLLRDIEAETVDFIDNFDGSQQEPTVLPARIPQLLINGSSGIAVGMATNI 183

Query: 264 PPHNLGELVDALCVLIHNPEAT 286
           PPHNLGE++D    LI NPE T
Sbjct: 184 PPHNLGEVIDGAIALIRNPEIT 205

HSP 2 Score: 70.5 bits (171), Expect = 4.5e-11
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   L++ +  L+++ +   +DGI DIRDESDR GMRIVIELKR A   ++ NNLY+ T 
Sbjct: 273 NKAALIERIADLVNDKK---IDGIADIRDESDRDGMRIVIELKRDAYARVVLNNLYKQTP 332

Query: 327 LQSSFSCNMVGVGKKTCGALT 348
           +QS+F  N++ +   T   LT
Sbjct: 333 IQSNFGANLLALVNGTPEVLT 350

[Close]

BLAST of Cla022060 vs. Swiss-Prot
Match: PARC_SYNY3 (DNA topoisomerase 4 subunit A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=parC PE=3 SV=2)

HSP 1 Score: 279.6 bits (714), Expect = 4.8e-74
Identity = 132/198 (66.67%), Postives = 161/198 (81.31%), Query Frame = 1


Query: 86  GRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDGLKPVHRRILFAMHELGLSSRKPFKK 145
           G+I+  +LH+E   +Y+ YAMSV++GRALPDVRDGLKPVHRRIL+AM+ELGL+  +PF+K
Sbjct: 9   GQIIPTDLHEEMERSYLEYAMSVIVGRALPDVRDGLKPVHRRILYAMYELGLTPDRPFRK 68

Query: 146 CARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCPLIQGHGNFGSIDADPPAAMRYTEC 205
           CARVVG+VLGK+HPHGD +VYD+LVRM QDFS R PL+ GHGNFGS+D DPPAAMRYTE 
Sbjct: 69  CARVVGDVLGKYHPHGDQSVYDALVRMVQDFSSRYPLLAGHGNFGSVDNDPPAAMRYTET 128

Query: 206 RLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPP 265
           RL  +    +L  +    VDF  NFDNSQ+EP+++PA+LP LLLNG SGIAVGMAT+IPP
Sbjct: 129 RLAPIAMGAMLEGISEAIVDFTGNFDNSQEEPTVVPAQLPLLLLNGCSGIAVGMATSIPP 188

Query: 266 HNLGELVDALCVLIHNPE 284
           HNLGE+VD L  LI+ P+
Sbjct: 189 HNLGEVVDGLIGLINKPD 206

HSP 2 Score: 65.5 bits (158), Expect = 1.4e-09
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1


Query: 287 LDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTSLQSSF 332
           LDGI D+RDESDR+GMR+VIELKR A+P  I   LYR+T LQS+F
Sbjct: 295 LDGISDLRDESDRTGMRVVIELKRDAEPNAILQKLYRMTPLQSNF 339

[Close]

BLAST of Cla022060 vs. TrEMBL
Match: A0A0A0KDG8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401070 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 1.7e-142
Identity = 260/286 (90.91%), Postives = 269/286 (94.06%), Query Frame = 1


Query: 1   MASSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRDE 60
           MASSSGLRIS LLRHQLAPP VSNRF R C GLSELRFLST+N T++R +RLAKS RRDE
Sbjct: 1   MASSSGLRISYLLRHQLAPPLVSNRFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRRDE 60

Query: 61  PVKEEGAEGQDENGSVIVK-DRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRD 120
           PVK+EG +GQD NGSV VK D GGSDGRIVH  LHKEATDAYMAYAMSVLLGRALPDVRD
Sbjct: 61  PVKDEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRD 120

Query: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 180
           GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLR
Sbjct: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLR 180

Query: 181 CPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSL 240
            PLIQGHGNFGSIDADPPAAMRYTECRLEAL+EAMLLSDLE+NTVDFVPNFDNSQKEPSL
Sbjct: 181 SPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSL 240

Query: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           LPARLPTLLLNGSSGIAVGMATNIPPHNLGE+VDALCVLIHNPEAT
Sbjct: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEAT 286

[Close]

BLAST of Cla022060 vs. TrEMBL
Match: A0A059A928_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00313 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 2.0e-119
Identity = 234/289 (80.97%), Postives = 247/289 (85.47%), Query Frame = 1


Query: 1   MASSSGLRISSLL-RHQLAPPSVSNRFVRI-CHGLSELRFLSTRNFTSTRPIRLAKSRRR 60
           MA +S LR SSLL R +L  P   +R        LS LRF S  +    RP+R+   RRR
Sbjct: 20  MAFTSTLRFSSLLLRSRLPAPGNPDRLACAWTDRLSCLRFYSAPSSRGPRPVRV---RRR 79

Query: 61  DEPVKEEG-AEGQDENGSVIVKDRG-GSDGRIVHAELHKEATDAYMAYAMSVLLGRALPD 120
           D P K+EG AEGQD NG VIVKDR    +GRIV  ELHKEATDAYMAYAMSVLLGRALPD
Sbjct: 80  DGPPKQEGPAEGQDGNGGVIVKDREVEGNGRIVPTELHKEATDAYMAYAMSVLLGRALPD 139

Query: 121 VRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDF 180
           VRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDF
Sbjct: 140 VRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDF 199

Query: 181 SLRCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKE 240
           SLRCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEA+LL+D++L+TVDFVPNFDNSQKE
Sbjct: 200 SLRCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAVLLADIDLDTVDFVPNFDNSQKE 259

Query: 241 PSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           PSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVD LC LIHNPEAT
Sbjct: 260 PSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEAT 305

[Close]

BLAST of Cla022060 vs. TrEMBL
Match: A0A059A928_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00313 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.0e-17
Identity = 51/72 (70.83%), Postives = 58/72 (80.56%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV  +  L+   E  +LDGI DIRDESDRSGMRIVIELKRG+DPLI+ NNLYRLT+
Sbjct: 371 NKASLVQKIAELV---EDKSLDGISDIRDESDRSGMRIVIELKRGSDPLIVLNNLYRLTA 430

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMVG+
Sbjct: 431 LQSSFSCNMVGI 439

HSP 2 Score: 434.5 bits (1116), Expect = 1.3e-118
Identity = 225/287 (78.40%), Postives = 248/287 (86.41%), Query Frame = 1


Query: 1   MASSSGLRISS-LLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRD 60
           MA SS LR+SS L RH L  P    RF R+ HG S+LRFLST + + T  +R  ++RRRD
Sbjct: 1   MAFSSVLRLSSSLFRHHL--PLAQTRFSRLRHGFSKLRFLSTGSPSGTL-LRPVQARRRD 60

Query: 61  EPVKEEGAEGQDENGSVIVKD-RGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVR 120
                E  + +++NG ++V D  GG +GR+V  ELHKEAT+AYMAYAMSVLLGRALPDVR
Sbjct: 61  YSPGREQRDNEEQNGGLLVSDSNGGRNGRVVPTELHKEATEAYMAYAMSVLLGRALPDVR 120

Query: 121 DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 180
           DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYD+LVRMAQDFSL
Sbjct: 121 DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDALVRMAQDFSL 180

Query: 181 RCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPS 240
           R PLIQGHGNFGS+DADPPAAMRYTECRLEALTEA+LL+DLEL+TV+FVPNFDNSQKEPS
Sbjct: 181 RSPLIQGHGNFGSVDADPPAAMRYTECRLEALTEAVLLADLELDTVNFVPNFDNSQKEPS 240

Query: 241 LLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           LLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVD LC LIHNPEAT
Sbjct: 241 LLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEAT 284

[Close]

BLAST of Cla022060 vs. TrEMBL
Match: A0A067KY13_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03163 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.2e-17
Identity = 49/72 (68.06%), Postives = 56/72 (77.78%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+ N     LDGI DIRDESDRSGMRIV+ELKRGADP ++ NNLYRLT 
Sbjct: 350 NKASLVEKIAELVENKN---LDGISDIRDESDRSGMRIVVELKRGADPSVVLNNLYRLTP 409

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMVG+
Sbjct: 410 LQSSFSCNMVGI 418

HSP 2 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 222/287 (77.35%), Postives = 245/287 (85.37%), Query Frame = 1


Query: 1   MASSSGLRISS-LLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRD 60
           MA +S LR+SS +LR++LA P    RF  + H LSELRFLS  +      +R  K+R +D
Sbjct: 1   MALASSLRLSSSILRYRLAAPLYPTRFSSLRHNLSELRFLSASSSRPGTHVRPIKARLQD 60

Query: 61  EPVKEEGAEGQDENGSVIVKDRG-GSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVR 120
           +P KE+  EGQ+ NGSV+VKD    S+ RIV  ELHKEAT+AYMAYAMSVLLGRALPDVR
Sbjct: 61  DPQKEDPGEGQNGNGSVLVKDTSENSEERIVRVELHKEATEAYMAYAMSVLLGRALPDVR 120

Query: 121 DGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 180
           DGLKPVHRRIL+AMHELGL+SRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL
Sbjct: 121 DGLKPVHRRILYAMHELGLASRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSL 180

Query: 181 RCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPS 240
           R PLIQGHGNFGSIDADP AAMRYTECRLE L EAMLL+DL+ +TVDF PNFDNSQKEPS
Sbjct: 181 RFPLIQGHGNFGSIDADPAAAMRYTECRLEPLAEAMLLADLDQDTVDFTPNFDNSQKEPS 240

Query: 241 LLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           +LPARLPTLLLNG+SGIAVGMATNIPPHNLGELVD L VLIHNPEAT
Sbjct: 241 VLPARLPTLLLNGASGIAVGMATNIPPHNLGELVDVLSVLIHNPEAT 287

[Close]

BLAST of Cla022060 vs. TrEMBL
Match: M5X3P2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021419mg PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.1e-16
Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+ N    +L+GI DIRDESDRSGMR+VIELKRG+DP I+ NNLYRLTS
Sbjct: 353 NKSALVEKIAELVENK---SLEGISDIRDESDRSGMRVVIELKRGSDPSIVLNNLYRLTS 412

Query: 327 LQSSFSCNMVGV 339
           LQ SFSCNMVG+
Sbjct: 413 LQCSFSCNMVGI 421

HSP 2 Score: 425.6 bits (1093), Expect = 6.1e-116
Identity = 225/294 (76.53%), Postives = 249/294 (84.69%), Query Frame = 1


Query: 1   MASSSGLRISSLLRHQLAPPSVSNRFVRICHG---LSELRFLSTR----NFTSTRPIRLA 60
           MA SS +R+SS L  +  P S + RF R+ H    LS+LRFLST     ++T  +P++  
Sbjct: 15  MALSSAVRLSSSLLRRSLPLSHTFRFSRLRHQQRHLSDLRFLSTTLTPSSWTHLQPVQAR 74

Query: 61  KSRRRDEPVKEEGAEGQDENGSV-IVKD-RGGSDGRIVHAELHKEATDAYMAYAMSVLLG 120
             RR     KEE    +++NGS+ +VKD  GG D R+VH ELHKEAT+AYMAYAMSVLLG
Sbjct: 75  --RRVYTSAKEESHSNEEQNGSLLVVKDSNGGRDARVVHTELHKEATEAYMAYAMSVLLG 134

Query: 121 RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVR 180
           RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD+AVYD+LVR
Sbjct: 135 RALPDVRDGLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDSAVYDALVR 194

Query: 181 MAQDFSLRCPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFD 240
           MAQDFSLR PLIQGHGNFGSIDADPPAAMRYTECRLEALTEA+LL+DLEL+TVDFVPNFD
Sbjct: 195 MAQDFSLRSPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAVLLADLELDTVDFVPNFD 254

Query: 241 NSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           +SQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVD LC LIHNPEAT
Sbjct: 255 DSQKEPSLLPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCALIHNPEAT 306

[Close]

BLAST of Cla022060 vs. NCBI nr
Match: gi|659089205|ref|XP_008445382.1| (PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 1.3e-143
Identity = 262/286 (91.61%), Postives = 270/286 (94.41%), Query Frame = 1


Query: 1   MASSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRDE 60
           MASSSGLRIS LLRHQLAPP VSNRF R C GLSELRFL TRNFT++R +RLAKS RRDE
Sbjct: 1   MASSSGLRISYLLRHQLAPPLVSNRFTRTCRGLSELRFLPTRNFTASRSLRLAKSGRRDE 60

Query: 61  PVKEEGAEGQDENGSVIVK-DRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRD 120
            VK+EG EGQD NGSV VK D GGSDGRIVHA LHKEATDAYMAYAMSVLLGRALPDVRD
Sbjct: 61  LVKDEGEEGQDGNGSVAVKKDGGGSDGRIVHAALHKEATDAYMAYAMSVLLGRALPDVRD 120

Query: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 180
           GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR
Sbjct: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 180

Query: 181 CPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSL 240
            PLIQGHGNFGS+DADPPAAMRYTECRLEAL+EAMLLSDLE+NTVDFVPNFDNSQKEPSL
Sbjct: 181 SPLIQGHGNFGSVDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSL 240

Query: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           LPARLPTLLLNGSSGIAVGMATNIPPHNLGE+VDALCVLIHNPEAT
Sbjct: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEAT 286

[Close]

BLAST of Cla022060 vs. NCBI nr
Match: gi|659089205|ref|XP_008445382.1| (PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 4.5e-19
Identity = 54/72 (75.00%), Postives = 59/72 (81.94%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+ N    TLDGI DIRDESDR+GMRIVIELKRGADP IIQNNLYRLTS
Sbjct: 352 NKSALVEKIAELVENK---TLDGISDIRDESDRTGMRIVIELKRGADPSIIQNNLYRLTS 411

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMVG+
Sbjct: 412 LQSSFSCNMVGI 420

HSP 2 Score: 513.8 bits (1322), Expect = 2.4e-142
Identity = 260/286 (90.91%), Postives = 269/286 (94.06%), Query Frame = 1


Query: 1   MASSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRDE 60
           MASSSGLRIS LLRHQLAPP VSNRF R C GLSELRFLST+N T++R +RLAKS RRDE
Sbjct: 1   MASSSGLRISYLLRHQLAPPLVSNRFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRRDE 60

Query: 61  PVKEEGAEGQDENGSVIVK-DRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRD 120
           PVK+EG +GQD NGSV VK D GGSDGRIVH  LHKEATDAYMAYAMSVLLGRALPDVRD
Sbjct: 61  PVKDEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRD 120

Query: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 180
           GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLR
Sbjct: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLR 180

Query: 181 CPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSL 240
            PLIQGHGNFGSIDADPPAAMRYTECRLEAL+EAMLLSDLE+NTVDFVPNFDNSQKEPSL
Sbjct: 181 SPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSL 240

Query: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           LPARLPTLLLNGSSGIAVGMATNIPPHNLGE+VDALCVLIHNPEAT
Sbjct: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEAT 286

[Close]

BLAST of Cla022060 vs. NCBI nr
Match: gi|449458077|ref|XP_004146774.1| (PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 5.8e-19
Identity = 53/72 (73.61%), Postives = 59/72 (81.94%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+ N    TLDGI DIRDESDR+GMRIVIELKRGADP I+QNNLYRLTS
Sbjct: 352 NKSALVERIAELVENK---TLDGISDIRDESDRTGMRIVIELKRGADPSIVQNNLYRLTS 411

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMVG+
Sbjct: 412 LQSSFSCNMVGI 420

HSP 2 Score: 513.8 bits (1322), Expect = 2.4e-142
Identity = 260/286 (90.91%), Postives = 269/286 (94.06%), Query Frame = 1


Query: 1   MASSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTSTRPIRLAKSRRRDE 60
           MASSSGLRIS LLRHQLAPP VSNRF R C GLSELRFLST+N T++R +RLAKS RRDE
Sbjct: 1   MASSSGLRISYLLRHQLAPPLVSNRFTRTCLGLSELRFLSTKNSTASRSLRLAKSGRRDE 60

Query: 61  PVKEEGAEGQDENGSVIVK-DRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRD 120
           PVK+EG +GQD NGSV VK D GGSDGRIVH  LHKEATDAYMAYAMSVLLGRALPDVRD
Sbjct: 61  PVKDEGDDGQDGNGSVAVKKDGGGSDGRIVHTALHKEATDAYMAYAMSVLLGRALPDVRD 120

Query: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR 180
           GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLR
Sbjct: 121 GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLR 180

Query: 181 CPLIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSL 240
            PLIQGHGNFGSIDADPPAAMRYTECRLEAL+EAMLLSDLE+NTVDFVPNFDNSQKEPSL
Sbjct: 181 SPLIQGHGNFGSIDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSL 240

Query: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           LPARLPTLLLNGSSGIAVGMATNIPPHNLGE+VDALCVLIHNPEAT
Sbjct: 241 LPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEAT 286

[Close]

BLAST of Cla022060 vs. NCBI nr
Match: gi|1009119269|ref|XP_015876288.1| (PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 458.8 bits (1179), Expect = 9.3e-126
Identity = 235/284 (82.75%), Postives = 255/284 (89.79%), Query Frame = 1


Query: 3   SSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTST-RPIRLAKSRRRDEP 62
           S SGLR SS+LR +L+ P   +RF  +   L ELRFLS+ + T   R +R  K+RRRDEP
Sbjct: 21  SYSGLRFSSILRCRLSSPLFPSRFSWLRPDLPELRFLSSYSTTPRFRTLRPVKARRRDEP 80

Query: 63  VKEEGAEGQDENGSVIVKDRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDGL 122
           VKEE  EG+D NGSV+VKDR G+DGR+V  ELHKEATDAY+AYAMSVLLGRALPDVRDGL
Sbjct: 81  VKEE--EGEDGNGSVLVKDRNGNDGRVVPTELHKEATDAYIAYAMSVLLGRALPDVRDGL 140

Query: 123 KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCP 182
           KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLRCP
Sbjct: 141 KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRCP 200

Query: 183 LIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSLLP 242
           LI+GHGNFGSIDADPPAAMRYTECRL+AL+EAMLL+DLEL+TVDFVPNFDNSQKEPSLLP
Sbjct: 201 LIRGHGNFGSIDADPPAAMRYTECRLDALSEAMLLADLELDTVDFVPNFDNSQKEPSLLP 260

Query: 243 ARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           ARLPTLLLNGSSGIAVGMATNIPPHNLGELVD LCVLI+NPEAT
Sbjct: 261 ARLPTLLLNGSSGIAVGMATNIPPHNLGELVDVLCVLINNPEAT 302

[Close]

BLAST of Cla022060 vs. NCBI nr
Match: gi|1009119269|ref|XP_015876288.1| (PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Ziziphus jujuba])

HSP 1 Score: 96.7 bits (239), Expect = 9.3e-17
Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 1


Query: 267 NLGELVDALCVLIHNPEATTLDGIGDIRDESDRSGMRIVIELKRGADPLIIQNNLYRLTS 326
           N   LV+ +  L+ N    +LDGI DIRDESDRSGMRIVIELKRG++P I+ NNL+RLTS
Sbjct: 368 NKSALVEKIAELVENK---SLDGISDIRDESDRSGMRIVIELKRGSEPSIVLNNLFRLTS 427

Query: 327 LQSSFSCNMVGV 339
           LQSSFSCNMVG+
Sbjct: 428 LQSSFSCNMVGI 436

HSP 2 Score: 456.8 bits (1174), Expect = 3.5e-125
Identity = 234/284 (82.39%), Postives = 255/284 (89.79%), Query Frame = 1


Query: 3   SSSGLRISSLLRHQLAPPSVSNRFVRICHGLSELRFLSTRNFTST-RPIRLAKSRRRDEP 62
           S SGLR SS+LR +L+ P   +RF  +   L ELRFLS+ + T   R +R  K+RRRDEP
Sbjct: 21  SYSGLRFSSILRCRLSSPLFPSRFSWLRPDLPELRFLSSYSTTPRFRTLRPVKARRRDEP 80

Query: 63  VKEEGAEGQDENGSVIVKDRGGSDGRIVHAELHKEATDAYMAYAMSVLLGRALPDVRDGL 122
           VKEE  EG+D NGSV+VKDR G+DGR+V  ELHKEATDAY+AYAMSVLLGRALPDVRDGL
Sbjct: 81  VKEE--EGEDGNGSVLVKDRNGNDGRVVPTELHKEATDAYIAYAMSVLLGRALPDVRDGL 140

Query: 123 KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLRCP 182
           KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGD AVYDSLVRMAQDFSLRCP
Sbjct: 141 KPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDNAVYDSLVRMAQDFSLRCP 200

Query: 183 LIQGHGNFGSIDADPPAAMRYTECRLEALTEAMLLSDLELNTVDFVPNFDNSQKEPSLLP 242
           LI+GHGNFGSIDADPPAAMRYTECRL+AL+EAMLL+DLEL+TVDFVPNFDNSQKEPSLLP
Sbjct: 201 LIRGHGNFGSIDADPPAAMRYTECRLDALSEAMLLADLELDTVDFVPNFDNSQKEPSLLP 260

Query: 243 ARLPTLLLNGSSGIAVGMATNIPPHNLGELVDALCVLIHNPEAT 286
           ARLPTLLL+GSSGIAVGMATNIPPHNLGELVD LCVLI+NPEAT
Sbjct: 261 ARLPTLLLHGSSGIAVGMATNIPPHNLGELVDVLCVLINNPEAT 302

The following BLAST results are available for this feature:

BLAST of Cla022060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GYRA_NICBE	3.2e-110	76.78	DNA gyrase subunit A, chloroplastic/mitochondrial OS=Nicotiana benthamiana GN=GY...	[more]
GYRA_ARATH	6.9e-105	70.73	DNA gyrase subunit A, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=GYR...	[more]
GYRA_ORYSJ	7.4e-91	65.93	Probable DNA gyrase subunit A, chloroplastic/mitochondrial OS=Oryza sativa subsp...	[more]
GYRA_SYNY3	1.6e-80	70.30	DNA gyrase subunit A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=gyrA PE=...	[more]
PARC_SYNY3	4.8e-74	66.67	DNA topoisomerase 4 subunit A OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN...	[more]

BLAST of Cla022060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDG8_CUCSA	1.7e-142	90.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401070 PE=4 SV=1	[more]
A0A059A928_EUCGR	2.0e-119	80.97	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00313 PE=3 SV=1	[more]
A0A059A928_EUCGR	1.0e-17	70.83	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00313 PE=3 SV=1	[more]
A0A067KY13_JATCU	2.2e-17	68.06	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03163 PE=3 SV=1	[more]
M5X3P2_PRUPE	1.1e-16	66.67	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021419mg PE=4 S...	[more]

BLAST of Cla022060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089205\|ref\|XP_008445382.1\|	1.3e-143	91.61	PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis melo]	[more]
gi\|659089205\|ref\|XP_008445382.1\|	4.5e-19	75.00	PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis melo]	[more]
gi\|449458077\|ref\|XP_004146774.1\|	5.8e-19	73.61	PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Cucumis sativus]	[more]
gi\|1009119269\|ref\|XP_015876288.1\|	9.3e-126	82.75	PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Ziziphus jujuba]	[more]
gi\|1009119269\|ref\|XP_015876288.1\|	9.3e-17	68.06	PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002205	Topo_IIA_A/C
IPR013758	Topo_IIA_A/C_ab
IPR013760	Topo_IIA-like_dom_sf
IPR024946	Arginine repressor C-terminal-like domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006265	DNA topological change
GO:0006259	DNA metabolic process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006265	DNA topological change
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0009220	pyrimidine ribonucleotide biosynthetic process
cellular_component	GO:0005694	chromosome
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016592	mediator complex
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009295	nucleoid
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity
molecular_function	GO:0003916	DNA topoisomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla022060	Cla022060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal	PFAM	PF00521	DNA_topoisoIV	coord: 112..284 score: 1.6E-81coord: 286..338 score: 5.
IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal	SMART	SM00434	topIV4	coord: 91..364 score: 3.4
IPR013758	DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta	GENE3D	G3DSA:3.90.199.10		coord: 111..285 score: 2.6
IPR013760	DNA topoisomerase, type IIA-like domain	unknown	SSF56719	Type II DNA topoisomerase	coord: 86..339 score: 3.66E
IPR024946	Arginine repressor C-terminal-like domain	GENE3D	G3DSA:3.30.1360.40		coord: 286..334 score: 3.1
None	No IPR available	PANTHER	PTHR10169	DNA TOPOISOMERASE/GYRASE	coord: 32..338 score: 5.3E
None	No IPR available	PANTHER	PTHR10169:SF48	DNA GYRASE SUBUNIT A, CHLOROPLASTIC/MITOCHONDRIAL-RELATED	coord: 32..338 score: 5.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla022060	Cla97C08G153670	Watermelon (97103) v2	wmwmbB100
Cla022060	MELO3C011386	Melon (DHL92) v3.5.1	mewmB301
Cla022060	ClCG08G010760	Watermelon (Charleston Gray)	wcgwmB400
Cla022060	CSPI06G20750	Wild cucumber (PI 183967)	cpiwmB486
Cla022060	Cucsa.005100	Cucumber (Gy14) v1	cgywmB057
Cla022060	CmaCh05G004700	Cucurbita maxima (Rimu)	cmawmB751
Cla022060	CmoCh05G004940	Cucurbita moschata (Rifu)	cmowmB746
Cla022060	Lsi08G009310	Bottle gourd (USVL1VR-Ls)	lsiwmB465
Cla022060	Cp4.1LG11g04140	Cucurbita pepo (Zucchini)	cpewmB099
Cla022060	CsGy6G020100	Cucumber (Gy14) v2	cgybwmB442
Cla022060	MELO3C011386.2	Melon (DHL92) v3.6.1	medwmB296
Cla022060	Carg09240	Silver-seed gourd	carwmB0134
Cla022060	CsaV3_6G035790	Cucumber (Chinese Long) v3	cucwmB497

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla022060	Cucurbita maxima (Rimu)	cmawmB149
Cla022060	Cucurbita moschata (Rifu)	cmowmB135
Cla022060	Cucumber (Chinese Long) v2	cuwmB471
Cla022060	Cucurbita pepo (Zucchini)	cpewmB783
Cla022060	Silver-seed gourd	carwmB0649