Cla021868 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAAGGACAAACCCCAAGGCTATTCTGGTGGATTTCCAACACCATCAAGTCGTTACTCAGTTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCGATGCCTTCAGGTGCTCTTTCTGATTCAGGTCAATTTGGTCGTGAAAGGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCAAATGCCTGATAACCCACCGAGAAATATTGGTCACAGACGTGCCCATTCAGAAATCCTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTTGGTGTCATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCCACCTCCGCAATACAAGTTGGCGAGTCATCTTCTGCTGTTGGAGATGCAATATCAACTCCTACTCCAGCAATTGGAGCAGCAACCTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAGCTCGCTGAGCTTGCGCTTATTGACCCCAAACGTGCTAAGAGGTATAATTCCTTCATAATTCTCTCTCTCTCCCCCTCTCCCTCTTTAAACATGAAAAGAAACTGATAAATGTGTTATTTCAAGATGTATCTGTATCCCCAACAGATTTTGCGCATTGCTTTTTTTCAAACCCAATATACCTTTTGTGCATTGCTTTATTTTGCTCATATTTACTATTGATGTTCATATGCTAGTCAGAACTACCGTTGCTGTACAATTTATGATAACTCAACATTTGAACTTCGTTGGATGCTTTGCCTAAATTTCAAGAACCTGTGATGGTAATGAAGTGTTTTTGTCAATAGTTGACAAGTAGTTTAGGTTAAGCTTCTATTATTATTTTTCTAAAACATGAAACGAGAAGATTGTTGAGTTATCAAGTAGTTTAGGTTAACTTCTGTTATTATTAGTTATTGGTTTTTTTATTGTTGCCGATTATTTTACAGAAGTTATTCCTATTCTTTCTGTATATGAAAGGTTGTTACAAAGTTTTAGCTAGTAATTAAACTCTGGGGATTCTGTAATGTTGTACAGCATTGCTTTCTAATAAATGTTTTTTCCGTATATTTAAGTGGTAGGAACCAAATCATTTGTCTTTGGCCGTGTATGGTACTTTTTCTTTGTAATTTCTCGTTTGATGAAATTACTTTATTTATTTTCAAGATAAAATAATTTGTCTATCTAGAGTTTCTTTGGGGAATTTTAACTCTAAGAAAATGAAACTCGATCTTTTGTGCTGAGTTATGAGGCAGCTTCTAGAATTTAGCTGGTGTGTGATCATTTACATGGATTATGTTTCTCTCTTATCTCGAAGAGCCTGGAGACCGTTTTTAAACCCTGTATATTCCCTCCCCTTCTCCATTGTAAGCATGTTTTTCTTGAACTTTTTCATGTTTGGGATTATTTGCTTTAGCGTCCTTCAATTATTATGTTCATTCTGTTTCCTGTGAAAAATGGAAAAACAAGAATAGAAAATTTGTTTGTAAATCCCCTTTGTTGTGCATTGTATAGGATATGGGCAAATAGACAGTCGGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGGTGGATTGTCAAATAGTTTATCGTGCGTGTTTGATCGTATTTTTGGATGCTCATTTTATATTTTCATACCATTTGAATTTCAGAATTCTCTTATGTTTTACTGATTGCCTTCTTATTATCAGAGAGACACAAACGGTCTTTCTGCTGAGAACAATGAATTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGGTAAGACCTCTATAGTTTCATTTTGATTGCACATTTTTTAAATTGAAACAAAAATTTTCATTCATGAAATGAAAAGAGGTATTGCTTGAAGTACAATAAAACATAATAAGCAAGATAATAGCGCAAAGTTGGACTTGTTCAGAAAATTAAAGTCAATACAATCAAATCCAACCCAAGAAGAAACAAATTGTCTCTTTGAATGAAAATTCCAAATGCCACTGAAACTGAAACTCTGAGAACGAGCAACCATGTGGTGAGGATAACTTCTAATAAACTGGTGATAACCAACAATCCATTAAACCAGAGCCGCAAGAGAGGAACAAACTGACTAGATTAAAAGGAGAACCACAACGCCTTAGAACCGGCAAATTCAAATAGAAAGAGACCGCTGAGAACTTGGCAAGGGGCAAACAAAATCAGAAAAATCCAACCTCCCTCCAACTATGGCAACTTGGTGACAAAGCCACCCTAAAATTCCAGCTTCTTGAAACTGATCAAGCGAAGAAAACAAGCACAACAAGGAGATCCATCTCATTTTTTCTTCCTTTTTTTCCCATACTCAGCAAACCTTGATATCAAAGCTACTTCAAAATTCTGAGATTAGAATAAATGACAAAACCTGCCCACCCTTGCAATCGAAGATCATCAATGCTTCTTTAAAATTATGAGACTTCGGTGATTGCCCATTATAGCTGCCTTCTCTTAGTTTTTATCTAATCGCTCCATTTTTAATTGTTGAAATGTAGGTCCTTTTTGGAAGATGATTTTATTTGCATTTTTGGCATTCATAGACATTGTCACATTGAAAGTTGCTTTAGTCTCCAACTAA ATGGAGAAGGACAAACCCCAAGGCTATTCTGGTGGATTTCCAACACCATCAAGTCGTTACTCAGTTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCGATGCCTTCAGGTGCTCTTTCTGATTCAGGTCAATTTGGTCGTGAAAGGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCAAATGCCTGATAACCCACCGAGAAATATTGGTCACAGACGTGCCCATTCAGAAATCCTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTTGGTGTCATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCCACCTCCGCAATACAAGTTGGCGAGTCATCTTCTGCTGTTGGAGATGCAATATCAACTCCTACTCCAGCAATTGGAGCAGCAACCTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAGCTCGCTGAGCTTGCGCTTATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATAGACAGTCGGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTTCTGCTGAGAACAATGAATTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGGTCCTTTTTGGAAGATGATTTTATTTGCATTTTTGGCATTCATAGACATTGTCACATTGAAAGTTGCTTTAGTCTCCAACTAA ATGGAGAAGGACAAACCCCAAGGCTATTCTGGTGGATTTCCAACACCATCAAGTCGTTACTCAGTTCTTTCACCAACTGGAAGCATTTTCAATGGAAAATCTGAGGCAACTTCATCTTCAATGTTGCTTCCTCCGATGCCTTCAGGTGCTCTTTCTGATTCAGGTCAATTTGGTCGTGAAAGGCCCACTGATTCTAATCGGTTCAGCCATGATATTAGTCAAATGCCTGATAACCCACCGAGAAATATTGGTCACAGACGTGCCCATTCAGAAATCCTGACCCTTCCTGATGATATTTGTTTTGACAATGACCTTGGTGTCATTGGTAGTGCTGATGGCCCTTCTTTTTCTGATGATACTGAGGAAGATTTGTTGTCCATGTACCTTGACATGGACAAATTCAATTCTTCGACTGCCACCTCCGCAATACAAGTTGGCGAGTCATCTTCTGCTGTTGGAGATGCAATATCAACTCCTACTCCAGCAATTGGAGCAGCAACCTCTAAAGATGATACTGCTGTTGGTTTGAAGGAGAGGCCGAGAGTTAGACACCAGCATAGCCAGTCCATGGATGGCTTGACAACCATAAAGCCTGAGATGCTTGTCTCAGGGTCTGAAGAAGCCTCTGCAGCCGATTCCAAGAAAGCCATGTCAGCTACAAAGCTCGCTGAGCTTGCGCTTATTGACCCCAAACGTGCTAAGAGGATATGGGCAAATAGACAGTCGGCTGCTAGGTCAAAGGAAAGAAAGATGCGGTACATTGCTGAGCTTGAACGGAAAGTTCAGACTCTGCAAACAGAGGCAACTTCTTTATCTGCTCAGTTAACCCTCTTACAGAGAGACACAAACGGTCTTTCTGCTGAGAACAATGAATTAAAGCTGCGGTTGCAGACAATGGAGCAGCAGGTTCACCTGCAAGATGGTCCTTTTTGGAAGATGATTTTATTTGCATTTTTGGCATTCATAGACATTGTCACATTGAAAGTTGCTTTAGTCTCCAACTAA MEKDKPQGYSGGFPTPSSRYSVLSPTGSIFNGKSEATSSSMLLPPMPSGALSDSGQFGRERPTDSNRFSHDISQMPDNPPRNIGHRRAHSEILTLPDDICFDNDLGVIGSADGPSFSDDTEEDLLSMYLDMDKFNSSTATSAIQVGESSSAVGDAISTPTPAIGAATSKDDTAVGLKERPRVRHQHSQSMDGLTTIKPEMLVSGSEEASAADSKKAMSATKLAELALIDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLSAENNELKLRLQTMEQQVHLQDGPFWKMILFAFLAFIDIVTLKVALVSN
BLAST of Cla021868 vs. Swiss-Prot
Match: POF21_ARATH (Probable transcription factor PosF21 OS=Arabidopsis thaliana GN=POSF21 PE=2 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 7.4e-98 Identity = 197/279 (70.61%), Postives = 220/279 (78.85%), Query Frame = 1
BLAST of Cla021868 vs. Swiss-Prot
Match: RF2A_ORYSJ (Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a PE=1 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 5.3e-72 Identity = 153/249 (61.45%), Postives = 178/249 (71.49%), Query Frame = 1
BLAST of Cla021868 vs. Swiss-Prot
Match: RF2B_ORYSJ (Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b PE=1 SV=2) HSP 1 Score: 180.6 bits (457), Expect = 2.7e-44 Identity = 113/228 (49.56%), Postives = 133/228 (58.33%), Query Frame = 1
BLAST of Cla021868 vs. Swiss-Prot
Match: VIP1_ARATH (Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 7.0e-32 Identity = 105/260 (40.38%), Postives = 137/260 (52.69%), Query Frame = 1
BLAST of Cla021868 vs. Swiss-Prot
Match: BZP02_ORYSJ (Basic leucine zipper 2 OS=Oryza sativa subsp. japonica GN=BZIP02 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.9e-14 Identity = 75/269 (27.88%), Postives = 116/269 (43.12%), Query Frame = 1
BLAST of Cla021868 vs. TrEMBL
Match: A0A0A0L894_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G172930 PE=4 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 1.5e-158 Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 1
BLAST of Cla021868 vs. TrEMBL
Match: W9QIN9_9ROSA (Putative transcription factor PosF21 OS=Morus notabilis GN=L484_016125 PE=4 SV=1) HSP 1 Score: 459.5 bits (1181), Expect = 3.4e-126 Identity = 241/308 (78.25%), Postives = 257/308 (83.44%), Query Frame = 1
BLAST of Cla021868 vs. TrEMBL
Match: A0A0A0L642_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G173030 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 1.7e-125 Identity = 244/310 (78.71%), Postives = 261/310 (84.19%), Query Frame = 1
BLAST of Cla021868 vs. TrEMBL
Match: M5XCD0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005999mg PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 6.7e-122 Identity = 230/308 (74.68%), Postives = 257/308 (83.44%), Query Frame = 1
BLAST of Cla021868 vs. TrEMBL
Match: A0A0B2RMK2_GLYSO (Putative transcription factor PosF21 OS=Glycine soja GN=glysoja_005340 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 4.8e-120 Identity = 238/311 (76.53%), Postives = 258/311 (82.96%), Query Frame = 1
BLAST of Cla021868 vs. NCBI nr
Match: gi|449459834|ref|XP_004147651.1| (PREDICTED: probable transcription factor PosF21 [Cucumis sativus]) HSP 1 Score: 567.0 bits (1460), Expect = 2.2e-158 Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 1
BLAST of Cla021868 vs. NCBI nr
Match: gi|659077138|ref|XP_008439053.1| (PREDICTED: probable transcription factor PosF21 [Cucumis melo]) HSP 1 Score: 565.5 bits (1456), Expect = 6.3e-158 Identity = 290/307 (94.46%), Postives = 294/307 (95.77%), Query Frame = 1
BLAST of Cla021868 vs. NCBI nr
Match: gi|659077162|ref|XP_008439065.1| (PREDICTED: probable transcription factor PosF21 [Cucumis melo]) HSP 1 Score: 467.2 bits (1201), Expect = 2.3e-128 Identity = 245/307 (79.80%), Postives = 262/307 (85.34%), Query Frame = 1
BLAST of Cla021868 vs. NCBI nr
Match: gi|703062319|ref|XP_010086697.1| (putative transcription factor PosF21 [Morus notabilis]) HSP 1 Score: 459.5 bits (1181), Expect = 4.9e-126 Identity = 241/308 (78.25%), Postives = 257/308 (83.44%), Query Frame = 1
BLAST of Cla021868 vs. NCBI nr
Match: gi|1009173021|ref|XP_015867590.1| (PREDICTED: probable transcription factor PosF21 [Ziziphus jujuba]) HSP 1 Score: 459.5 bits (1181), Expect = 4.9e-126 Identity = 238/307 (77.52%), Postives = 260/307 (84.69%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|