Cla021570 (gene) Watermelon (97103) v1

Overview
NameCla021570
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAuxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
LocationChr5 : 4224821 .. 4226263 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAACATGCTGGAAACTGATCTTTGTCTCGGCCTCCCCGGCGGTGGCGGTGGCGGCGGAGGAGAGCCGGAAACTCCCAAAGCTAATGGGAAAAGAGGGTTCTCTGAAACCGTTGATCTGAAACTCAATATCCAATCTAAGCCTGGAGTTACCGTCGATCTCACTCCACAGAATAATAATACTTCAACTGATGAGGAGAATCTCATAACCTCCAAAGATCCTGCAAAGCCACCTGCCAAGTATGTTTCTTCTATCTTCTAGATATCGAAATTAACTGTTACCATTTCAGATTATTATCTAATTCAAAAGTTTAAGCTGTTGGATTGCTATATATTTTTTCAAATATGTTAAGTAATAATTAAGGATTTATATGGTATGGGTGAATATTGTAGGGCACAAGTTGTGGGATGGCCACCGGTGCGATCTTACCGGAAGAATGCGATGTCTCAAAAGAGCACTGACGCCGGAGAAAAAGGTGGAAGCGGCGGTGGCGGTTCGGGTATGTTTGTCAAAGTCTGTATGGATGGCGCACCTTATCTGCGAAAGGTGGACCTAAAGATGTACAAAAGCTACCAAGAGCTGTCGAATGCCTTGGCCAAGATGTTCAGCTCCTTCACTATGGCGGGTTAGTTTATTTTTAGAAAGAGGATACTTTATTATACCTACTCGTATGATTTTCTTTTGGCAAGATACTAGAGGATAAAGAGAAAATATTAGATAATATTAAAAGAGAGAGAGTTTAATATAAATAATACATGGTATATTTAATTTACACTTCTTACTTCTCTCACATAAAATATATTTATTTTCAATATGGGTATTTTTATTTTATTTTTTTACTATTTTAAACATGTAGAGAGATTTGGGTAATGAATTAGGTTAGATCTGAAAACACAAGAATCCTTGATGCCAGAATATGTGGGACGATCATTTGGAATCATTAAGAAAGGCACATTACAGCCTAGCCATATGGCTTTATTATTATTTCTTATAATAATTATTTTATGTTGGTGAATTAAATAATTTTAATTAACCAAGTGTTAGCTATTTTTTAATTATTATTGGGTGTTAATGATAATGTTTAATAATAAAATGTAAAGGTGACTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTACCTTGGGAGTAAGTTCTTATTCCAACCAAAACCTTCCTTATCTCCATAACCAATCAACAACCAATTATTTTTAGATTCAATTCTTCTTCTAATTATATTTTAATCCACCTCTTTACTTTAGGATGTTTGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCAGAAGCTATTGGACTCGGTATGTATAATTTATTTGCCTATAATTAA

mRNA sequence

ATGGTCAACATGCTGGAAACTGATCTTTGTCTCGGCCTCCCCGGCGGTGGCGGTGGCGGCGGAGGAGAGCCGGAAACTCCCAAAGCTAATGGGAAAAGAGGGTTCTCTGAAACCGTTGATCTGAAACTCAATATCCAATCTAAGCCTGGAGTTACCGTCGATCTCACTCCACAGAATAATAATACTTCAACTGATGAGGAGAATCTCATAACCTCCAAAGATCCTGCAAAGCCACCTGCCAAGGCACAAGTTGTGGGATGGCCACCGGTGCGATCTTACCGGAAGAATGCGATGTCTCAAAAGAGCACTGACGCCGGAGAAAAAGGTGGAAGCGGCGGTGGCGGTTCGGGTATGTTTGTCAAAGTCTGTATGGATGGCGCACCTTATCTGCGAAAGGTGGACCTAAAGATGTACAAAAGCTACCAAGAGCTGTCGAATGCCTTGGCCAAGATGTTCAGCTCCTTCACTATGGCGGGTGACTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTACCTTGGGAGATGTTTGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCAGAAGCTATTGGACTCGGTATGTATAATTTATTTGCCTATAATTAA

Coding sequence (CDS)

ATGGTCAACATGCTGGAAACTGATCTTTGTCTCGGCCTCCCCGGCGGTGGCGGTGGCGGCGGAGGAGAGCCGGAAACTCCCAAAGCTAATGGGAAAAGAGGGTTCTCTGAAACCGTTGATCTGAAACTCAATATCCAATCTAAGCCTGGAGTTACCGTCGATCTCACTCCACAGAATAATAATACTTCAACTGATGAGGAGAATCTCATAACCTCCAAAGATCCTGCAAAGCCACCTGCCAAGGCACAAGTTGTGGGATGGCCACCGGTGCGATCTTACCGGAAGAATGCGATGTCTCAAAAGAGCACTGACGCCGGAGAAAAAGGTGGAAGCGGCGGTGGCGGTTCGGGTATGTTTGTCAAAGTCTGTATGGATGGCGCACCTTATCTGCGAAAGGTGGACCTAAAGATGTACAAAAGCTACCAAGAGCTGTCGAATGCCTTGGCCAAGATGTTCAGCTCCTTCACTATGGCGGGTGACTATGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTTCTGAACAGCTCTGAGTATGTGCCAACCTATGAAGATAAGGATGGTGATTGGATGCTGGTGGGAGATGTACCTTGGGAGATGTTTGTTGATTCATGCAAGCGCTTAAGGATAATGAAGGGATCAGAAGCTATTGGACTCGGTATGTATAATTTATTTGCCTATAATTAA

Protein sequence

MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNNNTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGSGMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGMYNLFAYN
Homology
[Close]
BLAST of Cla021570 vs. Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2)

HSP 1 Score: 300.1 bits (767), Expect = 2.2e-80
Identity = 158/226 (69.91%), Postives = 178/226 (78.76%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANG---KRGFSETVDLKLNIQSKPGVTVDLTPQ 61
           +N+ ET+LCLGLPGG        E+P  +G   KRGFSETVDLKLN+QS     VDL   
Sbjct: 1   MNLKETELCLGLPGGTE----TVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDL--- 60

Query: 62  NNNTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGSGM 121
           N N +  E+  +  KDP+KPPAKAQVVGWPPVR+YRKN M+ + +   E+  S GGG+  
Sbjct: 61  NTNGAPKEKTFL--KDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVA 120

Query: 122 FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDL 181
           FVKV MDGAPYLRKVDLKMY SY++LS+ALAKMFSSFTM G YGAQGMIDFMNESK+MDL
Sbjct: 121 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTM-GSYGAQGMIDFMNESKVMDL 180

Query: 182 LNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           LNSSEYVP+YEDKDGDWMLVGDVPW MFV+SCKRLRIMKGSEAIGL
Sbjct: 181 LNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGL 216

[Close]
BLAST of Cla021570 vs. Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 2.2e-80
Identity = 159/232 (68.53%), Postives = 178/232 (76.72%), Query Frame = 1 

Query: 1   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 60
           ++N+  T+LCLGLPGG       P       KRGFSETVDL LN+QS    +VDL     
Sbjct: 5   LMNLKATELCLGLPGGAEAVES-PAKSAVGSKRGFSETVDLMLNLQSNKEGSVDL----K 64

Query: 61  NTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAG------EKGGSGGG 120
           N S   +   T KDP+KPPAKAQVVGWPPVR+YRKN M+Q+ T +G      EK G+ GG
Sbjct: 65  NVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGG 124

Query: 121 GSGM--FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNE 180
           G+     VKV MDGAPYLRKVDLKMYKSYQ+LS+ALAKMFSSFTM G+YGAQGMIDFMNE
Sbjct: 125 GAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM-GNYGAQGMIDFMNE 184

Query: 181 SKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           SKLM+LLNSSEYVP+YEDKDGDWMLVGDVPWEMFV+SCKRLRIMKGSEA+GL
Sbjct: 185 SKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGL 230

[Close]
BLAST of Cla021570 vs. Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2)

HSP 1 Score: 278.9 bits (712), Expect = 5.2e-74
Identity = 145/225 (64.44%), Postives = 163/225 (72.44%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNNN 61
           +N+ ET+LCLGLPGG      +   P    KRGFSETVDLKLN+ ++P      T  +  
Sbjct: 7   LNLRETELCLGLPGG------DTVAPVTGNKRGFSETVDLKLNLNNEPANKEGSTTHDVV 66

Query: 62  TSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAM--SQKSTDAGEKGGSGGGGSGMF 121
           T   +E     KDPAKPPAKAQVVGWPPVRSYRKN M   QKS        SGG  +  F
Sbjct: 67  TFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKS--------SGGPEAAAF 126

Query: 122 VKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLL 181
           VKV MDGAPYLRK+DL+MYKSY ELSNAL+ MFSSFTM    G +GMIDFMNE KLMDL+
Sbjct: 127 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLV 186

Query: 182 NSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           NS +YVP+YEDKDGDWMLVGDVPW MFVD+CKRLR+MKGS+AIGL
Sbjct: 187 NSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGL 217

[Close]
BLAST of Cla021570 vs. Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.4e-73
Identity = 153/238 (64.29%), Postives = 171/238 (71.85%), Query Frame = 1 

Query: 1   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 60
           M+N   T+L LGLPGG  GG       K NGKRGFSETVDLKLN+ S        T  ++
Sbjct: 1   MINFEATELRLGLPGGNHGG---EMAGKNNGKRGFSETVDLKLNLSS--------TAMDS 60

Query: 61  NTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMS-QKST--DAGEKGGSGGGGSG 120
            +  D EN+   +   KPPAKAQVVGWPPVRS+RKN MS QK T  DA E      G SG
Sbjct: 61  VSKVDLENM--KEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSG 120

Query: 121 M-----------FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGM 180
                       +VKV MDGAPYLRK+DLK+YK+YQ+LSNAL+KMFSSFT+ G+YG QGM
Sbjct: 121 ATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTI-GNYGPQGM 180

Query: 181 IDFMNESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
            DFMNESKL+DLLN S+YVPTYEDKDGDWMLVGDVPWEMFVDSCKR+RIMKGSEAIGL
Sbjct: 181 KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGL 224

[Close]
BLAST of Cla021570 vs. Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.2e-68
Identity = 144/236 (61.02%), Postives = 162/236 (68.64%), Query Frame = 1 

Query: 6   ETDLCLGLPGGGGGGGGEPETPKANGKRGFSET-----------VDLKLNIQSKPGVTVD 65
           ET+L LGLPG GG             KRGFSET           VDL LN+ SK   T  
Sbjct: 5   ETELRLGLPGNGG------TEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTA 64

Query: 66  LT---PQNNNTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMS-QKSTDAGEKGG 125
                P + + +  +E  +   DPAKPPAK QVVGWPPVRS+RKN ++ QKS   GE+  
Sbjct: 65  AAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSV--GEESE 124

Query: 126 SGGGGSGMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFM 185
                +  FVKV MDGAPYLRKVDLKMYKSY+ELS++L KMFSSFT  G+  +QGM DFM
Sbjct: 125 KNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTF-GNCESQGMKDFM 184

Query: 186 NESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLGM 227
           NESKL DLLNSS+YVPTYEDKDGDWMLVGDVPWEMFV+SCKRLRIMKG EAIGLG+
Sbjct: 185 NESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGL 231

[Close]
BLAST of Cla021570 vs. TrEMBL
Match: A0A0A0LA18_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_3G143570 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 1.9e-115
Identity = 211/224 (94.20%), Postives = 215/224 (95.98%), Query Frame = 1 

Query: 1   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 60
           MVNMLETDLCLGLPGGG     EPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN
Sbjct: 7   MVNMLETDLCLGLPGGGA----EPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 66

Query: 61  NTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGSGMFV 120
           +TSTDEE+LI SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKS++AGEKGGS GG S MFV
Sbjct: 67  DTSTDEESLIASKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSSEAGEKGGSSGG-SAMFV 126

Query: 121 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 180
           KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN
Sbjct: 127 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 186

Query: 181 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 187 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225

[Close]
BLAST of Cla021570 vs. TrEMBL
Match: A0A0A0LIL5_CUCSA (Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G200420 PE=3 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 2.1e-90
Identity = 178/233 (76.39%), Postives = 191/233 (81.97%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPG-------VTVD 61
           V++ ET+LCLGLPGGGG GG +    KA+GKRGFSETVDLKLN+QSK G       V VD
Sbjct: 14  VSLKETELCLGLPGGGGSGGDQTSL-KASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVD 73

Query: 62  LTPQNNNTST--DEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSG 121
           L     N ST  D E  + SKDPAKPPAKAQVVGWPPVRSYRKN M+QK+T  GE    G
Sbjct: 74  LNENIKNVSTNVDGEKSLCSKDPAKPPAKAQVVGWPPVRSYRKNVMAQKNTSGGEGTEKG 133

Query: 122 GGGSGM-FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMN 181
            GGS   FVKVCMDGAPYLRKVDLKMY+SYQELS+ALAKMFSSFTM G+YG QGMIDFMN
Sbjct: 134 NGGSSAAFVKVCMDGAPYLRKVDLKMYQSYQELSDALAKMFSSFTM-GEYGTQGMIDFMN 193

Query: 182 ESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           E KLMDLLNSSE+VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 194 ERKLMDLLNSSEFVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 244

[Close]
BLAST of Cla021570 vs. TrEMBL
Match: M5XGE5_PRUPE (Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010698mg PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 1.2e-88
Identity = 174/224 (77.68%), Postives = 190/224 (84.82%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNNN 61
           +N+ ET+LCLGLPGGG     EPETP+A GKRGFSET+DLKLN+QSK  +  ++    N 
Sbjct: 11  LNLKETELCLGLPGGGTVP--EPETPRATGKRGFSETIDLKLNLQSKEDLNDNV---KNI 70

Query: 62  TSTDEENLIT-SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGSGMFV 121
            S ++ NL+T +KDPAKPPAKAQVVGWPPVRSYRKN M+QKS+   E    G G S  FV
Sbjct: 71  ASKEKNNLLTCTKDPAKPPAKAQVVGWPPVRSYRKNIMAQKSSSE-ESTEKGSGCSAAFV 130

Query: 122 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 181
           KVCMDGAPYLRKVDLKMYKSYQELSN+LAKMFSSFTM G YGAQGMIDFMNESKLMDLLN
Sbjct: 131 KVCMDGAPYLRKVDLKMYKSYQELSNSLAKMFSSFTM-GYYGAQGMIDFMNESKLMDLLN 190

Query: 182 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 191 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 227

[Close]
BLAST of Cla021570 vs. TrEMBL
Match: F6HDY1_VITVI (Auxin-responsive protein OS=Vitis vinifera GN=VIT_05s0020g04690 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 1.5e-88
Identity = 178/221 (80.54%), Postives = 191/221 (86.43%), Query Frame = 1 

Query: 6   ETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNNNTSTD 65
           ET+LCLGLPGGGGG   E ET KA+GKRGFSETVDLKLN+QSK  V VDL  +N      
Sbjct: 21  ETELCLGLPGGGGG---EAETLKASGKRGFSETVDLKLNLQSKESV-VDLN-ENVKCPPK 80

Query: 66  EENLIT-SKDPAKPPAKAQVVGWPPVRSYRKNAMSQK-STDAGEKGGSGGGGSGMFVKVC 125
           E+NL+  +KDPAKPPAKAQVVGWPPVRS+RKN M+QK S++ GEKG SG      FVKVC
Sbjct: 81  EKNLLPCTKDPAKPPAKAQVVGWPPVRSFRKNIMAQKNSSEEGEKGSSGAA----FVKVC 140

Query: 126 MDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLNSSE 185
           MDGAPYLRKVDLKMYKSYQELS+AL KMFSSFTM G+YGAQGMIDFMNESKLMDLLNSSE
Sbjct: 141 MDGAPYLRKVDLKMYKSYQELSDALGKMFSSFTM-GNYGAQGMIDFMNESKLMDLLNSSE 200

Query: 186 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 201 YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 231

[Close]
BLAST of Cla021570 vs. TrEMBL
Match: A0A061END6_THECC (Auxin-responsive protein OS=Theobroma cacao GN=TCM_020774 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 5.7e-88
Identity = 172/228 (75.44%), Postives = 184/228 (80.70%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGG----EPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTP 61
           +N  ET+LCLGLPGGGGGGGG    E ETPK  GKRGFSETVDLKLN+QSK    +DL  
Sbjct: 17  LNFKETELCLGLPGGGGGGGGGGGNEVETPKTTGKRGFSETVDLKLNLQSKE-TGMDLNK 76

Query: 62  QNNNTSTDEENL-ITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGS 121
              N S ++  L   +KDPAKPPAKAQVVGWPPVRSYRKN M+ +     E       G 
Sbjct: 77  NIENGSKEKTLLPACTKDPAKPPAKAQVVGWPPVRSYRKNIMANQKNSCEESDKKASSGG 136

Query: 122 GMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLM 181
             FVKV MDGAPYLRKVDLKMYKSYQELS+ALAKMFSSFTM G+YGAQGMIDFMNESKLM
Sbjct: 137 AAFVKVSMDGAPYLRKVDLKMYKSYQELSDALAKMFSSFTM-GNYGAQGMIDFMNESKLM 196

Query: 182 DLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           DLLNSS+YVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 197 DLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 242

[Close]
BLAST of Cla021570 vs. NCBI nr
Match: gi|449432618|ref|XP_004134096.1| (PREDICTED: auxin-responsive protein IAA14 [Cucumis sativus])

HSP 1 Score: 423.3 bits (1087), Expect = 2.7e-115
Identity = 211/224 (94.20%), Postives = 215/224 (95.98%), Query Frame = 1 

Query: 1   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 60
           MVNMLETDLCLGLPGGG     EPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN
Sbjct: 7   MVNMLETDLCLGLPGGGA----EPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 66

Query: 61  NTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGSGMFV 120
           +TSTDEE+LI SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKS++AGEKGGS GG S MFV
Sbjct: 67  DTSTDEESLIASKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSSEAGEKGGSSGG-SAMFV 126

Query: 121 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 180
           KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN
Sbjct: 127 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 186

Query: 181 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 187 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225

[Close]
BLAST of Cla021570 vs. NCBI nr
Match: gi|659076266|ref|XP_008438588.1| (PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo])

HSP 1 Score: 420.2 bits (1079), Expect = 2.3e-114
Identity = 210/224 (93.75%), Postives = 214/224 (95.54%), Query Frame = 1 

Query: 1   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNN 60
           MVNMLETDLCLGLPGGG     EPETPKANGKRGFSETVDLKLNIQSK GVTVDLTP+N+
Sbjct: 7   MVNMLETDLCLGLPGGGA----EPETPKANGKRGFSETVDLKLNIQSKTGVTVDLTPKNS 66

Query: 61  NTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSGGGGSGMFV 120
           +TSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKS D+GEKGGS GG S MFV
Sbjct: 67  DTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDSGEKGGSSGG-SAMFV 126

Query: 121 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 180
           KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN
Sbjct: 127 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDLLN 186

Query: 181 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 187 SSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225

[Close]
BLAST of Cla021570 vs. NCBI nr
Match: gi|778668893|ref|XP_011649168.1| (PREDICTED: auxin-responsive protein IAA14 [Cucumis sativus])

HSP 1 Score: 340.1 bits (871), Expect = 3.0e-90
Identity = 178/233 (76.39%), Postives = 191/233 (81.97%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPG-------VTVD 61
           V++ ET+LCLGLPGGGG GG +    KA+GKRGFSETVDLKLN+QSK G       V VD
Sbjct: 14  VSLKETELCLGLPGGGGSGGDQTSL-KASGKRGFSETVDLKLNLQSKDGGGGVGVGVGVD 73

Query: 62  LTPQNNNTST--DEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSG 121
           L     N ST  D E  + SKDPAKPPAKAQVVGWPPVRSYRKN M+QK+T  GE    G
Sbjct: 74  LNENIKNVSTNVDGEKSLCSKDPAKPPAKAQVVGWPPVRSYRKNVMAQKNTSGGEGTEKG 133

Query: 122 GGGSGM-FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMN 181
            GGS   FVKVCMDGAPYLRKVDLKMY+SYQELS+ALAKMFSSFTM G+YG QGMIDFMN
Sbjct: 134 NGGSSAAFVKVCMDGAPYLRKVDLKMYQSYQELSDALAKMFSSFTM-GEYGTQGMIDFMN 193

Query: 182 ESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           E KLMDLLNSSE+VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 194 ERKLMDLLNSSEFVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 244

[Close]
BLAST of Cla021570 vs. NCBI nr
Match: gi|659130454|ref|XP_008465181.1| (PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo])

HSP 1 Score: 339.7 bits (870), Expect = 3.9e-90
Identity = 177/233 (75.97%), Postives = 191/233 (81.97%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKP-------GVTVD 61
           V++ ET+LCLGLPGGGGGGG +    K++GKRGFSETVDLKLN+QSK        GV VD
Sbjct: 14  VSLKETELCLGLPGGGGGGGDQTSL-KSSGKRGFSETVDLKLNLQSKDGGGGGGVGVGVD 73

Query: 62  LTPQNNNTST--DEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSTDAGEKGGSG 121
           L     N ST  D E  + SKDPAKPPAKAQVVGWPPVRSYRKN M+QK+T  GE    G
Sbjct: 74  LNENVKNVSTNVDGEKSLCSKDPAKPPAKAQVVGWPPVRSYRKNVMAQKNTSGGEGAEKG 133

Query: 122 -GGGSGMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMN 181
             G S  FVKVCMDGAPYLRKVDLKMY+SYQELS+ALAKMFSSFTM G+YG QGMIDFMN
Sbjct: 134 SSGSSAAFVKVCMDGAPYLRKVDLKMYQSYQELSDALAKMFSSFTM-GEYGTQGMIDFMN 193

Query: 182 ESKLMDLLNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           E KLMDLLNSSE+VPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL
Sbjct: 194 ERKLMDLLNSSEFVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 244

[Close]
BLAST of Cla021570 vs. NCBI nr
Match: gi|694418597|ref|XP_009337294.1| (PREDICTED: auxin-responsive protein IAA14-like [Pyrus x bretschneideri])

HSP 1 Score: 335.1 bits (858), Expect = 9.7e-89
Identity = 173/226 (76.55%), Postives = 188/226 (83.19%), Query Frame = 1 

Query: 2   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTPQNNN 61
           +N+ ET+LCLGLPGGG     EPET K  GKRGFSETVDLKLN+QSK  +  ++    N 
Sbjct: 11  LNLRETELCLGLPGGGTTTVAEPETAKTTGKRGFSETVDLKLNLQSKEDLNDNV---KNI 70

Query: 62  TSTDEENLIT-SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKST--DAGEKGGSGGGGSGM 121
            S D+ NL++ +KDP+KPPAKAQVVGWPPVRSYRKN MSQK+T  +  EK   GGG S  
Sbjct: 71  ASKDKNNLLSCTKDPSKPPAKAQVVGWPPVRSYRKNIMSQKNTSEEKTEKASGGGGCSAA 130

Query: 122 FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAGDYGAQGMIDFMNESKLMDL 181
           FVKVCMDGAPYLRKVDLKMYKSYQELSNAL+KMFSSFT  G YG QGMIDFMNESKLMDL
Sbjct: 131 FVKVCMDGAPYLRKVDLKMYKSYQELSNALSKMFSSFT-TGYYGTQGMIDFMNESKLMDL 190

Query: 182 LNSSEYVPTYEDKDGDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGL 225
           LNSSEYVPTYEDKDGDWMLVGDVPW MFVDSCKRLRIMKGSEAIGL
Sbjct: 191 LNSSEYVPTYEDKDGDWMLVGDVPWGMFVDSCKRLRIMKGSEAIGL 232

The following BLAST results are available for this feature:
BLAST of Cla021570 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IAA14_ARATH2.2e-8069.91Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2[more]
IAA7_ARATH2.2e-8068.53Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1[more]
IAA17_ARATH5.2e-7464.44Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2[more]
IAA16_ARATH4.4e-7364.29Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=1 SV=1[more]
AUX28_SOYBN7.2e-6861.02Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1[more]
BLAST of Cla021570 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA18_CUCSA1.9e-11594.20Auxin-responsive protein OS=Cucumis sativus GN=Csa_3G143570 PE=3 SV=1[more]
A0A0A0LIL5_CUCSA2.1e-9076.39Auxin-responsive protein OS=Cucumis sativus GN=Csa_2G200420 PE=3 SV=1[more]
M5XGE5_PRUPE1.2e-8877.68Auxin-responsive protein OS=Prunus persica GN=PRUPE_ppa010698mg PE=3 SV=1[more]
F6HDY1_VITVI1.5e-8880.54Auxin-responsive protein OS=Vitis vinifera GN=VIT_05s0020g04690 PE=3 SV=1[more]
A0A061END6_THECC5.7e-8875.44Auxin-responsive protein OS=Theobroma cacao GN=TCM_020774 PE=3 SV=1[more]
BLAST of Cla021570 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432618|ref|XP_004134096.1|2.7e-11594.20PREDICTED: auxin-responsive protein IAA14 [Cucumis sativus][more]
gi|659076266|ref|XP_008438588.1|2.3e-11493.75PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo][more]
gi|778668893|ref|XP_011649168.1|3.0e-9076.39PREDICTED: auxin-responsive protein IAA14 [Cucumis sativus][more]
gi|659130454|ref|XP_008465181.1|3.9e-9075.97PREDICTED: auxin-responsive protein IAA14-like [Cucumis melo][more]
gi|694418597|ref|XP_009337294.1|9.7e-8976.55PREDICTED: auxin-responsive protein IAA14-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000270PB1_dom
IPR003311AUX_IAA
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009734 auxin-activated signaling pathway
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010583 response to cyclopentenone
biological_process GO:0006970 response to osmotic stress
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:1900057 positive regulation of leaf senescence
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0005515 protein binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003674 molecular_function
molecular_function GO:0042802 identical protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021570Cla021570.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000270PB1 domainPROFILEPS51745PB1coord: 117..218
score: 23
IPR003311AUX/IAA proteinPANTHERPTHR31734FAMILY NOT NAMEDcoord: 5..224
score: 3.4E
NoneNo IPR availablePANTHERPTHR31734:SF30AUXIN-RESPONSIVE PROTEIN IAA14-RELATEDcoord: 5..224
score: 3.4E
NoneNo IPR availableunknownSSF54277CAD & PB1 domainscoord: 115..217
score: 6.47

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021570Cla97C09G170160Watermelon (97103) v2wmwmbB232
Cla021570Cla97C06G116170Watermelon (97103) v2wmwmbB217
Cla021570Cla97C05G085700Watermelon (97103) v2wmwmbB206
Cla021570Cla97C02G042430Watermelon (97103) v2wmwmbB203
Cla021570Csa2G200420Cucumber (Chinese Long) v2cuwmB122
Cla021570Csa2G010920Cucumber (Chinese Long) v2cuwmB125
Cla021570Csa3G143570Cucumber (Chinese Long) v2cuwmB233
Cla021570MELO3C004382Melon (DHL92) v3.5.1mewmB416
Cla021570MELO3C026762Melon (DHL92) v3.5.1mewmB413
Cla021570MELO3C014310Melon (DHL92) v3.5.1mewmB415
Cla021570MELO3C006476Melon (DHL92) v3.5.1mewmB461
Cla021570ClCG06G006620Watermelon (Charleston Gray)wcgwmB331
Cla021570ClCG05G004660Watermelon (Charleston Gray)wcgwmB286
Cla021570CSPI02G02980Wild cucumber (PI 183967)cpiwmB127
Cla021570CSPI03G12530Wild cucumber (PI 183967)cpiwmB231
Cla021570CSPI02G10780Wild cucumber (PI 183967)cpiwmB125
Cla021570Cucsa.133250Cucumber (Gy14) v1cgywmB221
Cla021570Cucsa.254870Cucumber (Gy14) v1cgywmB479
Cla021570Cucsa.386640Cucumber (Gy14) v1cgywmB700
Cla021570CmaCh06G013440Cucurbita maxima (Rimu)cmawmB798
Cla021570CmaCh17G001900Cucurbita maxima (Rimu)cmawmB344
Cla021570CmaCh14G017740Cucurbita maxima (Rimu)cmawmB242
Cla021570CmoCh08G010880Cucurbita moschata (Rifu)cmowmB856
Cla021570CmoCh17G001860Cucurbita moschata (Rifu)cmowmB340
Cla021570CmoCh06G013550Cucurbita moschata (Rifu)cmowmB793
Cla021570CmoCh14G018110Cucurbita moschata (Rifu)cmowmB231
Cla021570Lsi09G012780Bottle gourd (USVL1VR-Ls)lsiwmB017
Cla021570Lsi05G016630Bottle gourd (USVL1VR-Ls)lsiwmB365
Cla021570Cp4.1LG08g03670Cucurbita pepo (Zucchini)cpewmB845
Cla021570Cp4.1LG17g01690Cucurbita pepo (Zucchini)cpewmB331
Cla021570CsGy3G012690Cucumber (Gy14) v2cgybwmB217
Cla021570CsGy2G010810Cucumber (Gy14) v2cgybwmB117
Cla021570MELO3C026762.2Melon (DHL92) v3.6.1medwmB404
Cla021570MELO3C006476.2Melon (DHL92) v3.6.1medwmB447
Cla021570Carg10063Silver-seed gourdcarwmB0218
Cla021570Carg16591Silver-seed gourdcarwmB0223
Cla021570Carg15874Silver-seed gourdcarwmB0316
Cla021570Carg06192Silver-seed gourdcarwmB0961
Cla021570CsaV3_3G012650Cucumber (Chinese Long) v3cucwmB239
Cla021570CsaV3_2G013210Cucumber (Chinese Long) v3cucwmB136
Cla021570Bhi12G002028Wax gourdwgowmB073
Cla021570BhiUN393G6Wax gourdwgowmB289
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cla021570Cla014808Watermelon (97103) v1wmwmB021
Cla021570Cla006021Watermelon (97103) v1wmwmB099
Cla021570Cla019805Watermelon (97103) v1wmwmB133
Cla021570Cla007545Watermelon (97103) v1wmwmB138
The following block(s) are covering this gene:
GeneOrganismBlock
Cla021570Watermelon (97103) v2wmwmbB221
Cla021570Wax gourdwgowmB270
Cla021570Cucurbita maxima (Rimu)cmawmB869
Cla021570Cucurbita moschata (Rifu)cmowmB560
Cla021570Watermelon (Charleston Gray)wcgwmB191
Cla021570Watermelon (Charleston Gray)wcgwmB382
Cla021570Cucumber (Chinese Long) v2cuwmB124
Cla021570Cucurbita pepo (Zucchini)cpewmB151
Cla021570Cucurbita pepo (Zucchini)cpewmB613
Cla021570Bottle gourd (USVL1VR-Ls)lsiwmB367
Cla021570Silver-seed gourdcarwmB0782