Cla021070 (gene) Watermelon (97103) v1

Overview
NameCla021070
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEthylene responsive transcription factor 1b (AHRD V1 *-** C0J9I8_9ROSA); contains Interpro domain(s) IPR001471 Pathogenesis-related transcriptional factor and ERF, DNA-binding
LocationChr5 : 127512 .. 128123 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAGTAACAGCAACAGCAATAGAAGCGTGGAAGGGTCGTCGGATTTGTTTCTGTTGGAGAAGATTCGGCGGCATCTTCTGGAAGACGAATTAGGGAATGTTGATGAGGAGGGAAGGTATGATAGTGGAGCTGCTTCGAAGAGTAGTAATAATAAAAATAACAATATTATGGTGGAAGTGGAAGTGGAAGTGGGCGAAGAGATGAGAGGGAAGTCAGTGAAGGGATCAATTATTAGAGAGGGCGGCGCATGGTCGTCAGGTGATCGGAGGGTGAGGGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCGTGGGGAAAGTACGCGGCAGAAATCAGAGACCCGACCAGAAAAGGGGCTCGAATATGGCTTGGGACTTACCACACCGCCCAAGACGCGGCTTTAGCTTACGATCGAGCTGCTTTCCAGATGCGAGGTGCGAAAGCCAAGCTCAACTTCCCCCACATGATTGCTTCCACTTCCAACAACGACTACTCGCCGCAGCTCCCACGTCGCAACTGTAAGCGTAGTTCGCCTAATTGTAATCCCCTCCGCGCCCCTCCGCCCCTATTCAACTTCAACCACTACTGCCCAACTAACTTCTTCAACTAA

mRNA sequence

ATGTCGAGTAACAGCAACAGCAATAGAAGCGTGGAAGGGTCGTCGGATTTGTTTCTGTTGGAGAAGATTCGGCGGCATCTTCTGGAAGACGAATTAGGGAATGTTGATGAGGAGGGAAGGTATGATAGTGGAGCTGCTTCGAAGAGTAGTAATAATAAAAATAACAATATTATGGTGGAAGTGGAAGTGGAAGTGGGCGAAGAGATGAGAGGGAAGTCAGTGAAGGGATCAATTATTAGAGAGGGCGGCGCATGGTCGTCAGGTGATCGGAGGGTGAGGGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCGTGGGGAAAGTACGCGGCAGAAATCAGAGACCCGACCAGAAAAGGGGCTCGAATATGGCTTGGGACTTACCACACCGCCCAAGACGCGGCTTTAGCTTACGATCGAGCTGCTTTCCAGATGCGAGGTGCGAAAGCCAAGCTCAACTTCCCCCACATGATTGCTTCCACTTCCAACAACGACTACTCGCCGCAGCTCCCACGTCGCAACTGTAAGCGTAGTTCGCCTAATTGTAATCCCCTCCGCGCCCCTCCGCCCCTATTCAACTTCAACCACTACTGCCCAACTAACTTCTTCAACTAA

Coding sequence (CDS)

ATGTCGAGTAACAGCAACAGCAATAGAAGCGTGGAAGGGTCGTCGGATTTGTTTCTGTTGGAGAAGATTCGGCGGCATCTTCTGGAAGACGAATTAGGGAATGTTGATGAGGAGGGAAGGTATGATAGTGGAGCTGCTTCGAAGAGTAGTAATAATAAAAATAACAATATTATGGTGGAAGTGGAAGTGGAAGTGGGCGAAGAGATGAGAGGGAAGTCAGTGAAGGGATCAATTATTAGAGAGGGCGGCGCATGGTCGTCAGGTGATCGGAGGGTGAGGGGTTTGCAGTTCAGAGGAGTTAGGAGGAGGCCGTGGGGAAAGTACGCGGCAGAAATCAGAGACCCGACCAGAAAAGGGGCTCGAATATGGCTTGGGACTTACCACACCGCCCAAGACGCGGCTTTAGCTTACGATCGAGCTGCTTTCCAGATGCGAGGTGCGAAAGCCAAGCTCAACTTCCCCCACATGATTGCTTCCACTTCCAACAACGACTACTCGCCGCAGCTCCCACGTCGCAACTGTAAGCGTAGTTCGCCTAATTGTAATCCCCTCCGCGCCCCTCCGCCCCTATTCAACTTCAACCACTACTGCCCAACTAACTTCTTCAACTAA

Protein sequence

MSSNSNSNRSVEGSSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEVEVEVGEEMRGKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYSPQLPRRNCKRSSPNCNPLRAPPPLFNFNHYCPTNFFN
Homology
[Close]
BLAST of Cla021070 vs. Swiss-Prot
Match: ERF99_ARATH (Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=2 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.1e-26
Identity = 52/69 (75.36%), Postives = 62/69 (89.86%), Query Frame = 1 

Query: 91  RVRGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAK 150
           R +G+Q+RGVRRRPWGK+AAEIRDP + GAR+WLGTY T +DAA+AYDRAAFQ+RG+KAK
Sbjct: 86  RQKGMQYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETPEDAAVAYDRAAFQLRGSKAK 145

Query: 151 LNFPHMIAS 160
           LNFPH+I S
Sbjct: 146 LNFPHLIGS 154

[Close]
BLAST of Cla021070 vs. Swiss-Prot
Match: ERF2_TOBAC (Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 5.6e-24
Identity = 58/126 (46.03%), Postives = 77/126 (61.11%), Query Frame = 1 

Query: 55  NNIMVEVEVEVGEEMRGKSVKGSIIREGGAWSSGDRRV-RGLQFRGVRRRPWGKYAAEIR 114
           N    E++ E  EE+   ++    +      ++    V +G  +RGVR+RPWGK+AAEIR
Sbjct: 56  NLTSTEIKAEPREEIEPATIPVPSVAPPAETTTAQAVVPKGRHYRGVRQRPWGKFAAEIR 115

Query: 115 DPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYSPQLPRRN 174
           DP + GAR+WLGTY TA++AALAYD+AA++MRG+KA LNFPH I         P+  R  
Sbjct: 116 DPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLNFPHRIGLN-----EPEPVRLT 175

Query: 175 CKRSSP 180
            KR SP
Sbjct: 176 AKRRSP 176

[Close]
BLAST of Cla021070 vs. Swiss-Prot
Match: ERF2_NICSY (Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-23
Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 1 

Query: 93  RGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLN 152
           +G  +RGVR+RPWGK+AAEIRDP + GAR+WLGTY TA++AALAYD+AA++MRG+KA LN
Sbjct: 99  KGRHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTYETAEEAALAYDKAAYRMRGSKALLN 158

Query: 153 FPHMIASTSNNDYSPQLPRRNCKRSSP 180
           FPH I         P+  R   KR SP
Sbjct: 159 FPHRIGLN-----EPEPVRLTVKRRSP 180

[Close]
BLAST of Cla021070 vs. Swiss-Prot
Match: EF100_ARATH (Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 1 

Query: 47  SKSSNNKNNNIMVEVEVEVGEEMRGKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWG 106
           S SS++++ +    V++E  E             +    S+     +G  +RGVR+RPWG
Sbjct: 98  SSSSSDEDRSSFPSVKIETPESFAAVDSVPVKKEKTSPVSAAVTAAKGKHYRGVRQRPWG 157

Query: 107 KYAAEIRDPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYS 166
           K+AAEIRDP + GAR+WLGT+ TA+DAALAYDRAAF+MRG++A LNFP  +     N   
Sbjct: 158 KFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAFRMRGSRALLNFPLRV-----NSGE 217

Query: 167 PQLPRRNCKRSS 179
           P   R   KRSS
Sbjct: 218 PDPVRIKSKRSS 224

[Close]
BLAST of Cla021070 vs. Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.7e-23
Identity = 53/95 (55.79%), Postives = 66/95 (69.47%), Query Frame = 1 

Query: 93  RGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLN 152
           RG  +RGVRRRPWGK+AAEIRDP + GAR+WLGTY T ++AA+AYD+AA++MRG+KA LN
Sbjct: 101 RGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLN 160

Query: 153 FPHMIA--------STSNNDYSPQLPRRNCKRSSP 180
           FPH I          T+    SP+ P  + + SSP
Sbjct: 161 FPHRIGLNEPEPVRVTAKRRASPE-PASSSENSSP 194

[Close]
BLAST of Cla021070 vs. TrEMBL
Match: A0A0A0L893_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-41
Identity = 107/173 (61.85%), Postives = 122/173 (70.52%), Query Frame = 1 

Query: 5   SNSNRSVEGSS-DLFLLEKIRRHLLEDELG-----NVDEEG--RYD---SGAASKSSNNK 64
           S+S+ S+EGSS DLF LE+IRRHLLED+LG     N  E+G  RYD   SGA  + SNN 
Sbjct: 3   SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNN 62

Query: 65  NNNIMVEVEVEVGEEMRGKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWGKYAAEIR 124
           NN +         ++M       SII           R RGLQFRGVRRRPWGKYAAEIR
Sbjct: 63  NNMV---------DQM------SSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIR 122

Query: 125 DPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYS 167
           DP++KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I   S+N+YS
Sbjct: 123 DPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHII---SSNNYS 157

[Close]
BLAST of Cla021070 vs. TrEMBL
Match: K7L178_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-27
Identity = 75/159 (47.17%), Postives = 98/159 (61.64%), Query Frame = 1 

Query: 2   SSNSNSNRSVEGSSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEV 61
           S  +N N ++E S D  LLE I+R+LL+D           D  + ++     NNN+    
Sbjct: 9   SQMNNFNTTLE-SDDFALLESIQRYLLDDN---------EDFNSLTEVLATPNNNVNA-- 68

Query: 62  EVEVGEEMRGKSVKGSIIREGGAWSSGDRR---VRGLQFRGVRRRPWGKYAAEIRDPTRK 121
              V   +       +   EG   SS + R   VR   ++GVRRRPWGK+AAEIRDP R 
Sbjct: 69  ---VNSPLSSLGHATTAATEGRGASSAEARGGHVRNQNYKGVRRRPWGKFAAEIRDPNRN 128

Query: 122 GARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMI 158
           GAR+WLGTY++A+DAALAYDRAAF+MRG+KAKLNFPH+I
Sbjct: 129 GARVWLGTYNSAEDAALAYDRAAFEMRGSKAKLNFPHLI 152

[Close]
BLAST of Cla021070 vs. TrEMBL
Match: A0A0B2RQG4_GLYSO (Ethylene-responsive transcription factor 13 OS=Glycine soja GN=glysoja_026150 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-27
Identity = 74/156 (47.44%), Postives = 98/156 (62.82%), Query Frame = 1 

Query: 5   SNSNRSVEGSSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEVEVE 64
           +N N ++E S D  LLE I+R+LL+D           D  + ++     NNN+       
Sbjct: 2   NNFNTTLE-SDDFALLESIQRYLLDDN---------EDFNSITEVLATPNNNVNA----- 61

Query: 65  VGEEMRGKSVKGSIIREGGAWSSGDRR---VRGLQFRGVRRRPWGKYAAEIRDPTRKGAR 124
           V   +       +   EG   SS + R   VR   ++GVRRRPWGK+AAEIRDP+R GAR
Sbjct: 62  VNSPLSSLGHATTAATEGRGASSAEARGGHVRNQNYKGVRRRPWGKFAAEIRDPSRNGAR 121

Query: 125 IWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMI 158
           +WLGTY++A+DAALAYDRAAF+MRG+KAKLNFPH+I
Sbjct: 122 VWLGTYNSAEDAALAYDRAAFEMRGSKAKLNFPHLI 142

[Close]
BLAST of Cla021070 vs. TrEMBL
Match: W9QSR5_9ROSA (Ethylene-responsive transcription factor 13 OS=Morus notabilis GN=L484_021851 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.2e-27
Identity = 75/168 (44.64%), Postives = 97/168 (57.74%), Query Frame = 1 

Query: 11  VEGSSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEVEVEVGEEMR 70
           +  S+D+ LLE +R+HLL+D+   V+    + +  A                V     M 
Sbjct: 6   IPNSADMALLESVRQHLLDDDC--VNPPATFFANVAP---------------VREATRMT 65

Query: 71  GKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTYHTA 130
           G        RE  A S G      + FRGVRRRPWGKYAAEIRDP + GAR+WLGTY T 
Sbjct: 66  GIEQYQEGARERHAPSGG------VHFRGVRRRPWGKYAAEIRDPKKNGARVWLGTYETQ 125

Query: 131 QDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYSPQLPRRNCKRSS 179
           +DAALAYDRAAF+MRG+KAKLNFPH+I S+   + +   P+R    +S
Sbjct: 126 EDAALAYDRAAFKMRGSKAKLNFPHLIGSSHELELARVTPKRRSPETS 150

[Close]
BLAST of Cla021070 vs. TrEMBL
Match: A0A0R0J8G6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G113800 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.9e-27
Identity = 74/156 (47.44%), Postives = 97/156 (62.18%), Query Frame = 1 

Query: 5   SNSNRSVEGSSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEVEVE 64
           +N N ++E S D  LLE I+R+LL+D           D  + ++     NNN+       
Sbjct: 2   NNFNTTLE-SDDFALLESIQRYLLDDN---------EDFNSLTEVLATPNNNVNA----- 61

Query: 65  VGEEMRGKSVKGSIIREGGAWSSGDRR---VRGLQFRGVRRRPWGKYAAEIRDPTRKGAR 124
           V   +       +   EG   SS + R   VR   ++GVRRRPWGK+AAEIRDP R GAR
Sbjct: 62  VNSPLSSLGHATTAATEGRGASSAEARGGHVRNQNYKGVRRRPWGKFAAEIRDPNRNGAR 121

Query: 125 IWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMI 158
           +WLGTY++A+DAALAYDRAAF+MRG+KAKLNFPH+I
Sbjct: 122 VWLGTYNSAEDAALAYDRAAFEMRGSKAKLNFPHLI 142

[Close]
BLAST of Cla021070 vs. NCBI nr
Match: gi|659077725|ref|XP_008439350.1| (PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 8.3e-44
Identity = 109/172 (63.37%), Postives = 126/172 (73.26%), Query Frame = 1 

Query: 1   MSSNSNSNRSVEGSS-DLFLLEKIRRHLLEDELG-----NVDEEG--RYD---SGAASKS 60
           M S+S+S+ S+EGSS DLFLLE+IRRHLLED+LG     N  E+G  RYD   SGA  + 
Sbjct: 1   MLSSSSSSSSLEGSSSDLFLLEQIRRHLLEDDLGKGSTNNNVEDGIIRYDISCSGAGWEM 60

Query: 61  SNNKNNNIMVEVEVEVGEEMRGKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWGKYA 120
           SNN NNN++ ++                IIR+     S   R RGLQFRGVRRRPWGKYA
Sbjct: 61  SNNNNNNMVDQMS-------------SIIIRDNPEEKS---RPRGLQFRGVRRRPWGKYA 120

Query: 121 AEIRDPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTS 162
           AEIRDP+RKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I+S +
Sbjct: 121 AEIRDPSRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHIISSNN 156

[Close]
BLAST of Cla021070 vs. NCBI nr
Match: gi|449432982|ref|XP_004134277.1| (PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 2.3e-41
Identity = 107/173 (61.85%), Postives = 122/173 (70.52%), Query Frame = 1 

Query: 5   SNSNRSVEGSS-DLFLLEKIRRHLLEDELG-----NVDEEG--RYD---SGAASKSSNNK 64
           S+S+ S+EGSS DLF LE+IRRHLLED+LG     N  E+G  RYD   SGA  + SNN 
Sbjct: 3   SSSSSSLEGSSSDLFHLEQIRRHLLEDDLGKGSTHNNVEDGIIRYDISRSGAGWEMSNNN 62

Query: 65  NNNIMVEVEVEVGEEMRGKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWGKYAAEIR 124
           NN +         ++M       SII           R RGLQFRGVRRRPWGKYAAEIR
Sbjct: 63  NNMV---------DQM------SSIIIRDNPEEKSQPRPRGLQFRGVRRRPWGKYAAEIR 122

Query: 125 DPTRKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYS 167
           DP++KGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPH+I   S+N+YS
Sbjct: 123 DPSKKGARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHII---SSNNYS 157

[Close]
BLAST of Cla021070 vs. NCBI nr
Match: gi|694427419|ref|XP_009341338.1| (PREDICTED: ethylene-responsive transcription factor 2-like [Pyrus x bretschneideri])

HSP 1 Score: 136.0 bits (341), Expect = 7.5e-29
Identity = 81/176 (46.02%), Postives = 108/176 (61.36%), Query Frame = 1 

Query: 15  SDLFLLEKIRRHLLEDE-------LGNVDEEGRYDSGAASKSSNNKNNNIMVEVEVEVGE 74
           S+  LLE IR++LL+D+       L NV E    DS ++ + ++N +N+I  +VE     
Sbjct: 9   SNRALLESIRQYLLDDDFETQVTFLVNVAE----DSQSSCRGTSNPSNSIPFDVEGLGAT 68

Query: 75  EMRGKSVKGSIIREGGAWSSGDRRVRGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTY 134
                 ++ S I EG A      + +G  FRGVRRRPWGKYAAEIRDP + GAR+W+GTY
Sbjct: 69  MGVNHDLETSNILEGAAHEQHAPQ-KGQHFRGVRRRPWGKYAAEIRDPMKNGARVWIGTY 128

Query: 135 HTAQDAALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYSPQLPRRNCKRSSPNCNP 184
            TA DA LAYDRAAF+MRG+KAKLNFPH+I +   +   P      C  S P+ +P
Sbjct: 129 ETAADAGLAYDRAAFKMRGSKAKLNFPHLIGT---HGLEPGRVAPKCGLSEPSSSP 176

[Close]
BLAST of Cla021070 vs. NCBI nr
Match: gi|764627242|ref|XP_004308505.2| (PREDICTED: ethylene-responsive transcription factor ERF107-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 134.0 bits (336), Expect = 2.9e-28
Identity = 77/169 (45.56%), Postives = 111/169 (65.68%), Query Frame = 1 

Query: 14  SSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEVEVEVGEEMRGKS 73
           +SD  LLE IR+HLL+D+    D +  + + + S+S+++ N   +    V++ E+    +
Sbjct: 52  NSDWALLESIRQHLLDDDF---DTQSAFFADSPSQSTSSSNCTEISSSNVDIVEQNNAFT 111

Query: 74  VKGSII-REGGAWSSGDRRVRGLQFRGVRRRPWGKYAAEIRDPTRKGARIWLGTYHTAQD 133
            +  +  R+  A S+ +       FRGVRRRPWGKYAAEIRDP + G R+WLGTY TA+D
Sbjct: 112 TELDVAARDDHAPSAPNH------FRGVRRRPWGKYAAEIRDPKKNGTRVWLGTYETAED 171

Query: 134 AALAYDRAAFQMRGAKAKLNFPHMIASTSNNDYSPQLPRR-NCKRSSPN 181
           A LAYDRAAF+MRG+KAKLNFPH+I  T + +    LP+R + + SSP+
Sbjct: 172 AGLAYDRAAFRMRGSKAKLNFPHLI-GTHDMEVGRVLPKRASPEPSSPS 210

[Close]
BLAST of Cla021070 vs. NCBI nr
Match: gi|955328933|ref|XP_003530145.3| (PREDICTED: ethylene-responsive transcription factor 14-like [Glycine max])

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27
Identity = 75/159 (47.17%), Postives = 98/159 (61.64%), Query Frame = 1 

Query: 2   SSNSNSNRSVEGSSDLFLLEKIRRHLLEDELGNVDEEGRYDSGAASKSSNNKNNNIMVEV 61
           S  +N N ++E S D  LLE I+R+LL+D           D  + ++     NNN+    
Sbjct: 24  SQMNNFNTTLE-SDDFALLESIQRYLLDDN---------EDFNSLTEVLATPNNNVNA-- 83

Query: 62  EVEVGEEMRGKSVKGSIIREGGAWSSGDRR---VRGLQFRGVRRRPWGKYAAEIRDPTRK 121
              V   +       +   EG   SS + R   VR   ++GVRRRPWGK+AAEIRDP R 
Sbjct: 84  ---VNSPLSSLGHATTAATEGRGASSAEARGGHVRNQNYKGVRRRPWGKFAAEIRDPNRN 143

Query: 122 GARIWLGTYHTAQDAALAYDRAAFQMRGAKAKLNFPHMI 158
           GAR+WLGTY++A+DAALAYDRAAF+MRG+KAKLNFPH+I
Sbjct: 144 GARVWLGTYNSAEDAALAYDRAAFEMRGSKAKLNFPHLI 167

The following BLAST results are available for this feature:
BLAST of Cla021070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERF99_ARATH2.1e-2675.36Ethylene-responsive transcription factor 13 OS=Arabidopsis thaliana GN=ERF13 PE=... [more]
ERF2_TOBAC5.6e-2446.03Ethylene-responsive transcription factor 2 OS=Nicotiana tabacum GN=ERF2 PE=2 SV=... [more]
ERF2_NICSY1.2e-2359.77Ethylene-responsive transcription factor 2 OS=Nicotiana sylvestris GN=ERF2 PE=2 ... [more]
EF100_ARATH2.1e-2344.70Ethylene-responsive transcription factor 1A OS=Arabidopsis thaliana GN=ERF1A PE=... [more]
ERF1_TOBAC4.7e-2355.79Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=... [more]
BLAST of Cla021070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L893_CUCSA1.6e-4161.85Uncharacterized protein OS=Cucumis sativus GN=Csa_3G116730 PE=4 SV=1[more]
K7L178_SOYBN1.7e-2747.17Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
A0A0B2RQG4_GLYSO2.2e-2747.44Ethylene-responsive transcription factor 13 OS=Glycine soja GN=glysoja_026150 PE... [more]
W9QSR5_9ROSA2.2e-2744.64Ethylene-responsive transcription factor 13 OS=Morus notabilis GN=L484_021851 PE... [more]
A0A0R0J8G6_SOYBN2.9e-2747.44Uncharacterized protein OS=Glycine max GN=GLYMA_07G113800 PE=4 SV=1[more]
BLAST of Cla021070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077725|ref|XP_008439350.1|8.3e-4463.37PREDICTED: ethylene-responsive transcription factor 13-like [Cucumis melo][more]
gi|449432982|ref|XP_004134277.1|2.3e-4161.85PREDICTED: ethylene-responsive transcription factor 1 [Cucumis sativus][more]
gi|694427419|ref|XP_009341338.1|7.5e-2946.02PREDICTED: ethylene-responsive transcription factor 2-like [Pyrus x bretschneide... [more]
gi|764627242|ref|XP_004308505.2|2.9e-2845.56PREDICTED: ethylene-responsive transcription factor ERF107-like [Fragaria vesca ... [more]
gi|955328933|ref|XP_003530145.3|2.4e-2747.17PREDICTED: ethylene-responsive transcription factor 14-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0009723 response to ethylene
biological_process GO:0006228 UTP biosynthetic process
biological_process GO:0006165 nucleoside diphosphate phosphorylation
biological_process GO:0006183 GTP biosynthetic process
biological_process GO:0006241 CTP biosynthetic process
biological_process GO:0009863 salicylic acid mediated signaling pathway
biological_process GO:0042538 hyperosmotic salinity response
biological_process GO:0009414 response to water deprivation
biological_process GO:0009733 response to auxin
biological_process GO:0002679 respiratory burst involved in defense response
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0043069 negative regulation of programmed cell death
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0035556 intracellular signal transduction
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0004550 nucleoside diphosphate kinase activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU39916watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla021070Cla021070.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU39916WMU39916transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 97..108
score: 5.7E-13coord: 136..156
score: 5.7
IPR001471AP2/ERF domainGENE3DG3DSA:3.30.730.10coord: 96..155
score: 1.5
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 97..146
score: 2.0
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 96..160
score: 1.9
IPR001471AP2/ERF domainPROFILEPS51032AP2_ERFcoord: 96..154
score: 23
IPR016177DNA-binding domainunknownSSF54171DNA-binding domaincoord: 97..155
score: 1.63
NoneNo IPR availablePANTHERPTHR31190FAMILY NOT NAMEDcoord: 14..180
score: 4.6
NoneNo IPR availablePANTHERPTHR31190:SF21ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13coord: 14..180
score: 4.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla021070Bhi01G000454Wax gourdwgowmB212
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla021070Cucurbita pepo (Zucchini)cpewmB845
Cla021070Bottle gourd (USVL1VR-Ls)lsiwmB365
Cla021070Cucumber (Gy14) v2cgybwmB217
Cla021070Melon (DHL92) v3.6.1medwmB447
Cla021070Silver-seed gourdcarwmB1013
Cla021070Cucumber (Chinese Long) v3cucwmB239
Cla021070Watermelon (97103) v2wmwmbB206
Cla021070Cucumber (Gy14) v1cgywmB479
Cla021070Cucurbita maxima (Rimu)cmawmB799
Cla021070Cucurbita moschata (Rifu)cmowmB793
Cla021070Melon (DHL92) v3.5.1mewmB461
Cla021070Watermelon (Charleston Gray)wcgwmB286
Cla021070Cucumber (Chinese Long) v2cuwmB233