Cla020692 (gene) Watermelon (97103) v1

Overview
NameCla020692
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNucleic acid binding protein (AHRD V1 **** Q93YF1_TOBAC); contains Interpro domain(s) IPR012677 Nucleotide-binding, alpha-beta plait
LocationChr5 : 27660852 .. 27663276 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCACGTTGAACATTGATTGTTCTATTTTCTGTACGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCAGTTAAAGCTGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGTATATTTTTATTTTAGGGTTTAGTGTACTTAGTCTAAAACCACTTCCAAGAAAGAGTAGGATTAGTCATTGGGGAGGGTGTGCAATTCTGGAATAAATGAAAATGTGAAGGTTTTCTTTCTCCCTAGACATTTGGTTCAAGACTTGGGGATATGTATCAAAAAAGGGTTATGAAAATGATTACTACAATGCTAACATAGAAATTTGGGGTTTGATCTTATTGTCCTCCTTAGAAATTTTGTAGCAGTTAATGTTTGTGTGTCAAACATCATGTCAGATAACAGAGCACACAAGCTATCCATTATATTGACTTACTTTTTGTAGATGTGTAATAATTCAGACTGAAGTGGTTCATATGCTCAAACTGGGGTGCAAGCCAGTTTACTTCCTTATAATTCAGGCTAAAGATGGTATCTATTTGTTATATCTTTCATTTTTCAGGCATCCAATAATGCTACATGTTTATTTAAGCGGTTTTCTTTTGTGGAGTTATTTTTATCAATAAGATAGGCCATTCAGGCTAAACTTGTGTTAAGTAAGTTTTGAATTGGAGCCGTTTTTATGGCATTTTCTTTTGACAACTTTTTGTAAAAAAGTTTCTGTGAATCCTCCTTGAGCAAAAGTAGTTCTGAAATAGCATCTTCAAAGAATCGAAGCTTAAGGATTTAATTCTTTGAATGCCTGTTTTCTTAGGGTTTAGTCATGGTTGTACACTTCCATACCTTTTGGACTGCTTATATATATATATATATATTGTCCTCTGGTTTTTATAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTGTGAGTTACTTTGATTATTTTTGTTTGCATGGCTAGAGATCCCACCTCATATTCTTGGGTTAACCGGAGCTTTCCTTTTTAGATATTTGTTGGAATTAACCCAAGCTTTCCTTCTAGATATTTGTTGGAGGGCTAGATCCTAATGTCACCGATGAAGATCTGAGACAACCTTTCTTGCAGTATGGTGAGATAGTCTCTGTTAAAATACCAGTTGGTAAAGGATGTGGGTTTGTCCAATTTGCCAACAGGTAAAATTTCTGTAATCAGGTTTTCTTTTCTTATCATATGAACAATGAAATAGTAGTATCTATCTGATAATTGGTTTTGTTTATTTACTGAGTCACTAATTTATGTCACATATTCTTCTCAAATTTCCTTTGCAGAAATGATGCTGAAGAGGCTTTGCAGAAACTAAATGCAACTGTAATTGGCAAGCAAACTGTTCGTCTTTCTTGGGGCCGAAATCCAGCAAATAAGCAGGCAAATTACCTTTCTCTCCTACTGTGAAAATGTAACAATATATATATATATATATTTATTTGTTTTGTTATTATCACTCTCTCAATTTTCATGACTTTCCTGATGGGCAAGGATAGGAAAGCAACTAAAATCAGTCGTTTTTAGGATTCCAATTAAGTCTGAGCTTTACTTTGGTCGATGAATTTCCATATTTAATCTTTTGTCATTGACAAAAAAATGTTTTTGCCAAACTGAAAACTCATGTGCTACCATATGTGTACTTTTTATTTGAACCTTTCTCATTTATGGAACCGATTTTGGGAACAAGTATCCGAAGAATGTCTGGTTTAAATTGCCTCTATATTCTTATCATTTGAAACGTCGAATTTAGTTGGATAAACAAACTAACGGTAATTTTTCTTGCATTTGTTGAGGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATGATGGCTATGGATATGGTCTACAACCTCATCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTGTTTATGGAAGCCATCAACAAGTAGTCTGA

mRNA sequence

ATGGTCACGTTGAACATTGATTGTTCTATTTTCTGTACGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCAGTTAAAGCTGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATGATGGCTATGGATATGGTCTACAACCTCATCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTGTTTATGGAAGCCATCAACAAGTAGTCTGA

Coding sequence (CDS)

ATGGTCACGTTGAACATTGATTGTTCTATTTTCTGTACGATGCAGATTGCAGCTCTCAAGGTCATTCGTAATAAGCAAACTGGTTTGTCTGAGGGGTATGGATTTGTAGAATTTTTTTCTCATGCAACAGCTGAGAAAGCTCTTCAGAACTATTCTGGAGTGTTCATGCCAAATACAGAGCAGACTTTCCGCCTCAATTGGGCAACATTTAGCACCGGTGACAAGCGATCAGATAATGATCCTGATCTTTCTATTTTTGTTGGAGACTTAGCTGCAGATGTTACTGATTCTTTGTTGTACGAAACATTTTCTAGTAAATATCCTTCAGTTAAAGCTGCAAAAGTTGTAATTGATGCCAACACTGGTCGTTCAAAGGGTTATGGTTTTGTGCGGTTTGGAGATGACAATGAAAGGTCTCAGGCCATGACCGAAATGAACGGTGTATATTGTTCAAGCAGACCTATGCGCATTGGTGCAGCAACGCCCAGAAAGTCTTCTGGATTTCAGCAACAGCATTCTTCACAAGGAGGATATTCAACAAATGGTTCCTTTAGCCATGGTCTCCAATCTGATGGAGATTCTGCAAATACAACTGTTTGGCAGTTCAGAGATTTTGGGAACCAGTGGAATGGAGCTTACTACGGAGGCCACATATATGATGGCTATGGATATGGTCTACAACCTCATCACGATCCAAGTATGTATCACGCAGCTTATGGAGCTTACACTGTTTATGGAAGCCATCAACAAGTAGTCTGA

Protein sequence

MVTLNIDCSIFCTMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDGDSANTTVWQFRDFGNQWNGAYYGGHIYDGYGYGLQPHHDPSMYHAAYGAYTVYGSHQQVV
Homology
[Close]
BLAST of Cla020692 vs. Swiss-Prot
Match: RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-70
Identity = 129/191 (67.54%), Postives = 159/191 (83.25%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           ++ ++K+IRNKQTG SE YGFVEF +HA AEK LQ+Y+G  MPNTEQ FRLNWA FSTG+
Sbjct: 109 EVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGE 168

Query: 75  KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGD 134
           KR++   D SIFVGDLA+DVTD++L +TF+S+YPS+K AKVV+DANTG SKGYGFVRFGD
Sbjct: 169 KRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGD 228

Query: 135 DNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQ-----GGYSTNGSFSHGLQ 194
           ++ERS+AMTEMNGVYCSSR MRIG ATP+K S   +Q+SSQ     GGY++NG+ +HG Q
Sbjct: 229 ESERSRAMTEMNGVYCSSRAMRIGVATPKKPSA-HEQYSSQAVILSGGYASNGAATHGSQ 288

Query: 195 SDGDSANTTVW 201
           SDGDS+NTT++
Sbjct: 289 SDGDSSNTTIF 298


HSP 2 Score: 43.1 bits (100), Expect = 5.2e-03
Identity = 31/127 (24.41%), Postives = 58/127 (45.67%), Query Frame = 1 

Query: 36  VEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVT 95
           +++ + A A +    Y   +MP  +Q  +      S    +S ++ + +I++GDL   + 
Sbjct: 37  MQYPAAAMAMQQQMMYGQQYMPYYQQHQQQQKMQQSPTQIQSSSEDNKTIWIGDLQQWMD 96

Query: 96  DSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYC--SSR 155
           +S L+  FS     V + K++ +  TG+S+ YGFV F       + +   NG     + +
Sbjct: 97  ESYLHSCFSQA-GEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQ 156

Query: 156 PMRIGAA 161
           P R+  A
Sbjct: 157 PFRLNWA 162


HSP 3 Score: 30.8 bits (68), Expect = 2.7e+01
Identity = 14/37 (37.84%), Postives = 22/37 (59.46%), Query Frame = 1 

Query: 31  EGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNW 68
           +G GFV+F   ++A++A+Q  SG  +   +Q  RL+W
Sbjct: 330 KGCGFVQFSDRSSAQEAIQKLSGAII--GKQAVRLSW 364

[Close]
BLAST of Cla020692 vs. Swiss-Prot
Match: RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 3.8e-70
Identity = 128/194 (65.98%), Postives = 159/194 (81.96%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +++++KVIRNK T  SEGYGFVEF S A AE+ LQNYSG  MPN++Q FR+NWA+FST
Sbjct: 131 TGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFST 190

Query: 73  GDKRS-DNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVR 132
           G+KR+ +N PDLS+FVGDL+ DVTD LL+ETFS +YPSVK+AKVVID+NTGRSKGYGFVR
Sbjct: 191 GEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVR 250

Query: 133 FGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQ-----GGYSTNGSFSH 192
           FGD+NERS+A+TEMNG YCS+R MR+G ATP+++   QQQHSSQ     GG+ +NGS  +
Sbjct: 251 FGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGY 310

Query: 193 GLQSDGDSANTTVW 201
           G QSDG+S N T++
Sbjct: 311 GSQSDGESTNATIF 324


HSP 2 Score: 69.7 bits (169), Expect = 5.2e-11
Identity = 68/248 (27.42%), Postives = 92/248 (37.10%), Query Frame = 1 

Query: 16  IAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWAT------ 75
           + + KV+ +  TG S+GYGFV F       +AL   +G +  N +   R+  AT      
Sbjct: 229 VKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQ--MRVGIATPKRAIA 288

Query: 76  ---------------------FSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYP 135
                                   G +      + +IFVG +  DV D  L + F S++ 
Sbjct: 289 NQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPF-SQFG 348

Query: 136 SVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGF 195
            V + K+ +       KG GFV+F D      A+  +NG         IG  T R S G 
Sbjct: 349 EVVSVKIPV------GKGCGFVQFADRKSAEDAIESLNGTV-------IGKNTVRLSWG- 408

Query: 196 QQQHSSQGGYSTNGSFSHGLQSDGDSANTTVWQFRDFGNQWNGAYYGGHIYDGYGYGLQP 237
                           S   Q  GDS           G QWNG Y  GH Y+  G G   
Sbjct: 409 ---------------RSPNKQWRGDS-----------GQQWNGGYSRGHGYNN-GGGYAN 432

[Close]
BLAST of Cla020692 vs. Swiss-Prot
Match: R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.5e-68
Identity = 130/187 (69.52%), Postives = 156/187 (83.42%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I +LKVIRNK  G SEGYGFVEF SH  A+K LQ ++G  MPNT+Q FRLNWA+FSTG+
Sbjct: 130 EIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGE 189

Query: 75  KRSDND-PDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFG 134
           KR +N+ PDLSIFVGDLA DV+D+LL+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFG
Sbjct: 190 KRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 249

Query: 135 DDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDGD 194
           D+NER++AMTEMNGV CSSR MRIG ATPRK++G+QQ    QGGY  +G+F+   +S+GD
Sbjct: 250 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ----QGGYMPSGAFT---RSEGD 309

Query: 195 SANTTVW 201
           + NTT++
Sbjct: 310 TINTTIF 309


HSP 2 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 51/186 (27.42%), Postives = 79/186 (42.47%), Query Frame = 1 

Query: 16  IAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGV-----------FMPNTEQTFR 75
           + A KV+ +  TG S+GYGFV F       KA+   +GV             P     ++
Sbjct: 226 VKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQ 285

Query: 76  LNWATFSTGD-KRSDNDP-DLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTG 135
                  +G   RS+ D  + +IFVG L + VTD  L + F S++  + + K+ +     
Sbjct: 286 QQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPF-SEFGEIVSVKIPV----- 345

Query: 136 RSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRI------GAATPRKSSGFQQQHSSQG 183
             KG GFV+F +     +A+ ++NG     + +R+          PR   G Q      G
Sbjct: 346 -GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG 404

[Close]
BLAST of Cla020692 vs. Swiss-Prot
Match: RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana GN=RBP47C PE=2 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 6.6e-67
Identity = 127/187 (67.91%), Postives = 154/187 (82.35%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I ++KVIRNK  GLSEGYGFVEF SH  A+K L+ ++G  MPNT+Q FRLNWA+FSTG+
Sbjct: 128 EIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGE 187

Query: 75  KRSDND-PDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFG 134
           KR +N+ PDLSIFVGDL+ DV+D+LL+ETFS KYPSVKAAKVV+DANTGRSKGYGFVRFG
Sbjct: 188 KRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFG 247

Query: 135 DDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDGD 194
           D+NER++AMTEMNGV CSSR MRIG ATPRK++G+QQ    QGGY  NG+ +   + +GD
Sbjct: 248 DENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQ----QGGYMPNGTLT---RPEGD 307

Query: 195 SANTTVW 201
             NTT++
Sbjct: 308 IMNTTIF 307


HSP 2 Score: 53.9 bits (128), Expect = 2.9e-06
Identity = 49/186 (26.34%), Postives = 77/186 (41.40%), Query Frame = 1 

Query: 16  IAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGV-----------FMPNTEQTFR 75
           + A KV+ +  TG S+GYGFV F       KA+   +GV             P     ++
Sbjct: 224 VKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQ 283

Query: 76  LNWATFSTGD-KRSDND-PDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTG 135
                   G   R + D  + +IFVG L + VTD  L + F +++  + + K+ +     
Sbjct: 284 QQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPF-NEFGEIVSVKIPV----- 343

Query: 136 RSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRI------GAATPRKSSGFQQQHSSQG 183
             KG GFV+F +     +A+ ++NG     + +R+          PR   G Q      G
Sbjct: 344 -GKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQWVDPYYG 402


HSP 3 Score: 43.1 bits (100), Expect = 5.2e-03
Identity = 29/96 (30.21%), Postives = 49/96 (51.04%), Query Frame = 1 

Query: 71  STGDKRSD--NDPDLSIFVGDLAADVTDSLLYETFSS-KYPSVKAAKVVIDANTGRSKGY 130
           S G+K  +  N  + +I+VGDL   + ++ L  +F+S     + + KV+ + N G S+GY
Sbjct: 87  SRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGY 146

Query: 131 GFVRFGDDNERSQAMTEMNGVYC--SSRPMRIGAAT 162
           GFV F   +   + + E NG     + +P R+  A+
Sbjct: 147 GFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWAS 182

[Close]
BLAST of Cla020692 vs. Swiss-Prot
Match: RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 2.5e-66
Identity = 123/189 (65.08%), Postives = 154/189 (81.48%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +++++KVIRNKQT  SEGYGFVEF S + AE+ALQ++SGV MPN EQ FRLNWA+FST
Sbjct: 142 TNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFST 201

Query: 73  GDKR-SDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVR 132
           G+KR S+N PDLSIFVGDLA DV+D++L ETF+ +YPSVK AKVVID+NTGRSKGYGFVR
Sbjct: 202 GEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVR 261

Query: 133 FGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSD 192
           FGD+NERS+AMTEMNG +CSSR MR+G ATP++++ + QQ+ SQ      G   +G  SD
Sbjct: 262 FGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSD 321

Query: 193 GDSANTTVW 201
           G+S N+T++
Sbjct: 322 GESNNSTIF 330


HSP 2 Score: 64.3 bits (155), Expect = 2.2e-09
Identity = 50/204 (24.51%), Postives = 78/204 (38.24%), Query Frame = 1 

Query: 16  IAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVF-------------------- 75
           +   KV+ +  TG S+GYGFV F       +A+   +G F                    
Sbjct: 240 VKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYG 299

Query: 76  MPNTEQTFRLNWATFSTGDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKV 135
             N  Q   L       G        + +IFVG L ADVT+  L + FS  +  V + K+
Sbjct: 300 QQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSD-FGEVVSVKI 359

Query: 136 VIDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKSSGFQQQHSS 195
            +       KG GFV+F +     +A+  +NG       +R+    +P K       +  
Sbjct: 360 PV------GKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDSGNQW 419

Query: 196 QGGYSTNGSFSHGLQSDGDSANTT 199
            GGYS    +++G  +   +   T
Sbjct: 420 NGGYSRGQGYNNGYANQDSNMYAT 436


HSP 3 Score: 39.3 bits (90), Expect = 7.5e-02
Identity = 26/87 (29.89%), Postives = 44/87 (50.57%), Query Frame = 1 

Query: 77  SDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDN 136
           S  D   +++VGDL   + ++ L+  FS     V + KV+ +  T +S+GYGFV F   +
Sbjct: 113 SGGDDVKTLWVGDLLHWMDETYLHTCFSHTN-EVSSVKVIRNKQTCQSEGYGFVEFLSRS 172

Query: 137 ERSQAMTEMNGVYC--SSRPMRIGAAT 162
              +A+   +GV    + +P R+  A+
Sbjct: 173 AAEEALQSFSGVTMPNAEQPFRLNWAS 198

[Close]
BLAST of Cla020692 vs. TrEMBL
Match: A0A0A0L4T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639100 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 3.4e-110
Identity = 201/252 (79.76%), Postives = 213/252 (84.52%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I+++KVIRNKQTGLSEGYGFVEF SH TAEK LQNYSG+FMP+TEQTFRLNWATFSTGD
Sbjct: 109 EISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGD 168

Query: 75  KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGD 134
           KRSDNDPDLSIFVGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGD
Sbjct: 169 KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGD 228

Query: 135 DNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGG--YSTNGSFSHGLQSDG 194
           DNERSQAMTEMNG+YCSSRPMRIGAATPRKSSG+QQQHSSQGG  +         LQ   
Sbjct: 229 DNERSQAMTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGKKFVIRNDAEEALQKLN 288

Query: 195 DSA------------NTTVWQFRDFGNQWNGAYYGGHIYDGYGYGLQPHHDPSMYHAAYG 253
            +             N    QFRDFGNQWNGAYYGGHIYDGYGYGL   HDPSMYHAAYG
Sbjct: 289 GTVIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYG 348

[Close]
BLAST of Cla020692 vs. TrEMBL
Match: A0A0A0L4T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639100 PE=4 SV=1)

HSP 1 Score: 41.2 bits (95), Expect = 2.2e+00
Identity = 23/69 (33.33%), Postives = 38/69 (55.07%), Query Frame = 1 

Query: 84  SIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMT 143
           +I+VGDL   + +S L+  FSS    + + KV+ +  TG S+GYGFV F       + + 
Sbjct: 85  TIWVGDLHHWMDESYLHSCFSS-VGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQ 144

Query: 144 EMNGVYCSS 153
             +G++  S
Sbjct: 145 NYSGMFMPS 152


HSP 2 Score: 380.2 bits (975), Expect = 2.0e-102
Identity = 196/269 (72.86%), Postives = 214/269 (79.55%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +I ++KVIRNKQTGLSEGYGFVEFFSHATAEK LQNYSG+FMPNTEQ FRLNWATFST
Sbjct: 118 TGEIVSIKVIRNKQTGLSEGYGFVEFFSHATAEKVLQNYSGMFMPNTEQPFRLNWATFST 177

Query: 73  GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRF 132
           G+KRS+N PDLSIFVGDLAADVTD LL+ETF+SKYPSVKAAKVVIDANTGRSKGYGFVRF
Sbjct: 178 GEKRSENGPDLSIFVGDLAADVTDGLLHETFASKYPSVKAAKVVIDANTGRSKGYGFVRF 237

Query: 133 GDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDG 192
           GDD ERSQAMTEMNG YCSSRPMRIGAATPRKSSG+QQQ+SSQGGY++NG+     QSDG
Sbjct: 238 GDDTERSQAMTEMNGAYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---STQSDG 297

Query: 193 DSANTT------------------VW-------QFR-DFGNQWNGAYYGGHIYDGYGYGL 252
           DS+NTT                   W       QFR D+ NQW GAYYGG +YDGYGY L
Sbjct: 298 DSSNTTEALQKLNETNIGKQTVRLSWGRNPANKQFRPDYSNQWGGAYYGGQVYDGYGYAL 357

[Close]
BLAST of Cla020692 vs. TrEMBL
Match: A0A061FB25_THECC (RNA-binding protein 47C isoform 7 OS=Theobroma cacao GN=TCM_033896 PE=4 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 9.5e-97
Identity = 181/243 (74.49%), Postives = 195/243 (80.25%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +IA++KVIRNKQTGLSEGYGFVEFFSHATAEK LQNY G+ MPN EQ FRLNWATFST
Sbjct: 121 TGEIASIKVIRNKQTGLSEGYGFVEFFSHATAEKVLQNYGGILMPNMEQPFRLNWATFST 180

Query: 73  GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRF 132
           G+KRS+N PDLSIFVGDLAADVTDSLL+ETF+SKY SVKAAKVVIDANTGRSKGYGFVRF
Sbjct: 181 GEKRSENGPDLSIFVGDLAADVTDSLLHETFASKYSSVKAAKVVIDANTGRSKGYGFVRF 240

Query: 133 GDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDG 192
           GDD ERSQAMTEMNGVYCSSRPMRIGAATPRKSSG+QQQ+SSQG                
Sbjct: 241 GDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGR--------------- 300

Query: 193 DSANTTVWQFRDFGNQWNGAYYGGHIYDGYGYGLQPHHDPSMYHAA---YGAYTVYGSHQ 252
                      D+GNQW+GAYYGG +YDGYGY   P HDP MY AA   YGAY +YGSHQ
Sbjct: 301 ----------ADYGNQWSGAYYGGQVYDGYGYAFPPPHDPGMYAAAAATYGAYPIYGSHQ 338

[Close]
BLAST of Cla020692 vs. TrEMBL
Match: A0A0B0PHI7_GOSAR (Polyadenylate-binding RBP47 OS=Gossypium arboreum GN=F383_06246 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.9e-93
Identity = 178/259 (68.73%), Postives = 197/259 (76.06%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I+++KVIRNKQTGLSEGYGFVEFFSHATAEK LQNYSG+ MPN EQ FRLNWATFS GD
Sbjct: 123 EISSIKVIRNKQTGLSEGYGFVEFFSHATAEKVLQNYSGILMPNMEQPFRLNWATFSMGD 182

Query: 75  KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGD 134
           K S+N PDLSIFVGDLAADVTDSLL+ETF+SKYPSVKA KVVIDANTGRSKGYGFVRFGD
Sbjct: 183 KHSENGPDLSIFVGDLAADVTDSLLHETFASKYPSVKAVKVVIDANTGRSKGYGFVRFGD 242

Query: 135 DNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDGDS 194
           D ERS AMTEMNGVYCSSRPMRIGAATPRKSS +QQQ+S Q  +          Q++ + 
Sbjct: 243 DTERSLAMTEMNGVYCSSRPMRIGAATPRKSSSYQQQYSLQVLHPNLMEILQTQQNNAEE 302

Query: 195 A--------------------NTTVWQFR-DFGNQWNGAYYGGHIYDGYGYGLQPHHDPS 253
           A                    N T  QFR D+GNQW GAYYGG +YDGYGY   P H+P 
Sbjct: 303 ALQKLNGTMIGKQTVRLSWGRNPTNKQFRADYGNQWGGAYYGGAVYDGYGYAFPPPHNPG 362

[Close]
BLAST of Cla020692 vs. TrEMBL
Match: M5XWD8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005903mg PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 4.0e-87
Identity = 161/188 (85.64%), Postives = 175/188 (93.09%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +IA++KVIRNKQT LSEGYGFVEFFSHATAEK LQ Y+G+ MPNTEQ FRLNWATFST
Sbjct: 123 TGEIASIKVIRNKQTLLSEGYGFVEFFSHATAEKVLQTYTGILMPNTEQPFRLNWATFST 182

Query: 73  GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRF 132
           GDKRSDN PDLSIFVGDLAADVTDSLL+ETFSSKYPSVKAAKVV DANTGRSKGYGFVRF
Sbjct: 183 GDKRSDNAPDLSIFVGDLAADVTDSLLHETFSSKYPSVKAAKVVFDANTGRSKGYGFVRF 242

Query: 133 GDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDG 192
           GD+NERSQAMTEMNGVYCSSRPMRIGAATPRKSSG+QQQ+SSQGGY +NG+ + G QSDG
Sbjct: 243 GDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGGYVSNGTPTQGFQSDG 302

Query: 193 DSANTTVW 201
           DS NTT++
Sbjct: 303 DSTNTTIF 310

[Close]
BLAST of Cla020692 vs. NCBI nr
Match: gi|700200013|gb|KGN55171.1| (hypothetical protein Csa_4G639100 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 4.8e-110
Identity = 201/252 (79.76%), Postives = 213/252 (84.52%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I+++KVIRNKQTGLSEGYGFVEF SH TAEK LQNYSG+FMP+TEQTFRLNWATFSTGD
Sbjct: 109 EISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQNYSGMFMPSTEQTFRLNWATFSTGD 168

Query: 75  KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGD 134
           KRSDNDPDLSIFVGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGD
Sbjct: 169 KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGD 228

Query: 135 DNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGG--YSTNGSFSHGLQSDG 194
           DNERSQAMTEMNG+YCSSRPMRIGAATPRKSSG+QQQHSSQGG  +         LQ   
Sbjct: 229 DNERSQAMTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGKKFVIRNDAEEALQKLN 288

Query: 195 DSA------------NTTVWQFRDFGNQWNGAYYGGHIYDGYGYGLQPHHDPSMYHAAYG 253
            +             N    QFRDFGNQWNGAYYGGHIYDGYGYGL   HDPSMYHAAYG
Sbjct: 289 GTVIGKQTVRLSWGRNPANKQFRDFGNQWNGAYYGGHIYDGYGYGLASPHDPSMYHAAYG 348

[Close]
BLAST of Cla020692 vs. NCBI nr
Match: gi|700200013|gb|KGN55171.1| (hypothetical protein Csa_4G639100 [Cucumis sativus])

HSP 1 Score: 41.2 bits (95), Expect = 3.1e+00
Identity = 23/69 (33.33%), Postives = 38/69 (55.07%), Query Frame = 1 

Query: 84  SIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGDDNERSQAMT 143
           +I+VGDL   + +S L+  FSS    + + KV+ +  TG S+GYGFV F       + + 
Sbjct: 85  TIWVGDLHHWMDESYLHSCFSS-VGEISSMKVIRNKQTGLSEGYGFVEFLSHTTAEKVLQ 144

Query: 144 EMNGVYCSS 153
             +G++  S
Sbjct: 145 NYSGMFMPS 152


HSP 2 Score: 380.2 bits (975), Expect = 2.8e-102
Identity = 196/269 (72.86%), Postives = 214/269 (79.55%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +I ++KVIRNKQTGLSEGYGFVEFFSHATAEK LQNYSG+FMPNTEQ FRLNWATFST
Sbjct: 118 TGEIVSIKVIRNKQTGLSEGYGFVEFFSHATAEKVLQNYSGMFMPNTEQPFRLNWATFST 177

Query: 73  GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRF 132
           G+KRS+N PDLSIFVGDLAADVTD LL+ETF+SKYPSVKAAKVVIDANTGRSKGYGFVRF
Sbjct: 178 GEKRSENGPDLSIFVGDLAADVTDGLLHETFASKYPSVKAAKVVIDANTGRSKGYGFVRF 237

Query: 133 GDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDG 192
           GDD ERSQAMTEMNG YCSSRPMRIGAATPRKSSG+QQQ+SSQGGY++NG+     QSDG
Sbjct: 238 GDDTERSQAMTEMNGAYCSSRPMRIGAATPRKSSGYQQQYSSQGGYASNGA---STQSDG 297

Query: 193 DSANTT------------------VW-------QFR-DFGNQWNGAYYGGHIYDGYGYGL 252
           DS+NTT                   W       QFR D+ NQW GAYYGG +YDGYGY L
Sbjct: 298 DSSNTTEALQKLNETNIGKQTVRLSWGRNPANKQFRPDYSNQWGGAYYGGQVYDGYGYAL 357

[Close]
BLAST of Cla020692 vs. NCBI nr
Match: gi|590592633|ref|XP_007017335.1| (RNA-binding protein 47C isoform 7 [Theobroma cacao])

HSP 1 Score: 361.3 bits (926), Expect = 1.4e-96
Identity = 181/243 (74.49%), Postives = 195/243 (80.25%), Query Frame = 1 

Query: 13  TMQIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFST 72
           T +IA++KVIRNKQTGLSEGYGFVEFFSHATAEK LQNY G+ MPN EQ FRLNWATFST
Sbjct: 121 TGEIASIKVIRNKQTGLSEGYGFVEFFSHATAEKVLQNYGGILMPNMEQPFRLNWATFST 180

Query: 73  GDKRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRF 132
           G+KRS+N PDLSIFVGDLAADVTDSLL+ETF+SKY SVKAAKVVIDANTGRSKGYGFVRF
Sbjct: 181 GEKRSENGPDLSIFVGDLAADVTDSLLHETFASKYSSVKAAKVVIDANTGRSKGYGFVRF 240

Query: 133 GDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDG 192
           GDD ERSQAMTEMNGVYCSSRPMRIGAATPRKSSG+QQQ+SSQG                
Sbjct: 241 GDDTERSQAMTEMNGVYCSSRPMRIGAATPRKSSGYQQQYSSQGR--------------- 300

Query: 193 DSANTTVWQFRDFGNQWNGAYYGGHIYDGYGYGLQPHHDPSMYHAA---YGAYTVYGSHQ 252
                      D+GNQW+GAYYGG +YDGYGY   P HDP MY AA   YGAY +YGSHQ
Sbjct: 301 ----------ADYGNQWSGAYYGGQVYDGYGYAFPPPHDPGMYAAAAATYGAYPIYGSHQ 338

[Close]
BLAST of Cla020692 vs. NCBI nr
Match: gi|728844924|gb|KHG24367.1| (Polyadenylate-binding RBP47 [Gossypium arboreum])

HSP 1 Score: 349.7 bits (896), Expect = 4.1e-93
Identity = 178/259 (68.73%), Postives = 197/259 (76.06%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I+++KVIRNKQTGLSEGYGFVEFFSHATAEK LQNYSG+ MPN EQ FRLNWATFS GD
Sbjct: 123 EISSIKVIRNKQTGLSEGYGFVEFFSHATAEKVLQNYSGILMPNMEQPFRLNWATFSMGD 182

Query: 75  KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGD 134
           K S+N PDLSIFVGDLAADVTDSLL+ETF+SKYPSVKA KVVIDANTGRSKGYGFVRFGD
Sbjct: 183 KHSENGPDLSIFVGDLAADVTDSLLHETFASKYPSVKAVKVVIDANTGRSKGYGFVRFGD 242

Query: 135 DNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQGGYSTNGSFSHGLQSDGDS 194
           D ERS AMTEMNGVYCSSRPMRIGAATPRKSS +QQQ+S Q  +          Q++ + 
Sbjct: 243 DTERSLAMTEMNGVYCSSRPMRIGAATPRKSSSYQQQYSLQVLHPNLMEILQTQQNNAEE 302

Query: 195 A--------------------NTTVWQFR-DFGNQWNGAYYGGHIYDGYGYGLQPHHDPS 253
           A                    N T  QFR D+GNQW GAYYGG +YDGYGY   P H+P 
Sbjct: 303 ALQKLNGTMIGKQTVRLSWGRNPTNKQFRADYGNQWGGAYYGGAVYDGYGYAFPPPHNPG 362

[Close]
BLAST of Cla020692 vs. NCBI nr
Match: gi|659103189|ref|XP_008452518.1| (PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo])

HSP 1 Score: 347.4 bits (890), Expect = 2.0e-92
Identity = 170/187 (90.91%), Postives = 182/187 (97.33%), Query Frame = 1 

Query: 15  QIAALKVIRNKQTGLSEGYGFVEFFSHATAEKALQNYSGVFMPNTEQTFRLNWATFSTGD 74
           +I+++KVIRNKQTGLSEGYGFVEF SHATAEK LQNYSG+FMP+TEQTFRLNWATFSTGD
Sbjct: 109 EISSMKVIRNKQTGLSEGYGFVEFLSHATAEKVLQNYSGMFMPSTEQTFRLNWATFSTGD 168

Query: 75  KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKYPSVKAAKVVIDANTGRSKGYGFVRFGD 134
           KRSDNDPDLSIFVGDLAADVTDSLLYETFSSK+PSVKAAKVVIDANTGRSKGYGFVRFGD
Sbjct: 169 KRSDNDPDLSIFVGDLAADVTDSLLYETFSSKFPSVKAAKVVIDANTGRSKGYGFVRFGD 228

Query: 135 DNERSQAMTEMNGVYCSSRPMRIGAATPRKSSGFQQQHSSQ-GGYSTNGSFSHGLQSDGD 194
           DNERSQAMTEMNG+YCSSRPMRIGAATPRKSSG+QQQHSSQ GGYSTNG FS GLQS+GD
Sbjct: 229 DNERSQAMTEMNGIYCSSRPMRIGAATPRKSSGYQQQHSSQGGGYSTNGYFSQGLQSEGD 288

Query: 195 SANTTVW 201
           SANTT++
Sbjct: 289 SANTTIF 295

The following BLAST results are available for this feature:
BLAST of Cla020692 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBP47_NICPL1.3e-7067.54Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia GN=RBP47 PE=1 S... [more]
RB47B_ARATH3.8e-7065.98Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana GN=RBP47B PE=2 SV=1[more]
R47CP_ARATH3.5e-6869.52Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana GN=RBP47C' PE=2 SV... [more]
RB47C_ARATH6.6e-6767.91Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana GN=RBP47C PE=2 SV=1[more]
RB47A_ARATH2.5e-6665.08Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana GN=RBP47A PE=2 SV=1[more]
BLAST of Cla020692 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4T7_CUCSA3.4e-11079.76Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639100 PE=4 SV=1[more]
A0A0A0L4T7_CUCSA2.2e+0033.33Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639100 PE=4 SV=1[more]
A0A061FB25_THECC9.5e-9774.49RNA-binding protein 47C isoform 7 OS=Theobroma cacao GN=TCM_033896 PE=4 SV=1[more]
A0A0B0PHI7_GOSAR2.9e-9368.73Polyadenylate-binding RBP47 OS=Gossypium arboreum GN=F383_06246 PE=4 SV=1[more]
M5XWD8_PRUPE4.0e-8785.64Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005903mg PE=4 SV=1[more]
BLAST of Cla020692 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200013|gb|KGN55171.1|4.8e-11079.76hypothetical protein Csa_4G639100 [Cucumis sativus][more]
gi|700200013|gb|KGN55171.1|3.1e+0033.33hypothetical protein Csa_4G639100 [Cucumis sativus][more]
gi|590592633|ref|XP_007017335.1|1.4e-9674.49RNA-binding protein 47C isoform 7 [Theobroma cacao][more]
gi|728844924|gb|KHG24367.1|4.1e-9368.73Polyadenylate-binding RBP47 [Gossypium arboreum][more]
gi|659103189|ref|XP_008452518.1|2.0e-9290.91PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020692Cla020692.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 85..154
score: 6.6E-16coord: 16..60
score: 3.
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 84..158
score: 2.4
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 15..70
score: 9.132coord: 83..162
score: 16
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 73..168
score: 2.4E-22coord: 15..68
score: 1.
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 15..71
score: 7.74E-11coord: 64..187
score: 9.77
NoneNo IPR availablePANTHERPTHR24012FAMILY NOT NAMEDcoord: 60..168
score: 9.9E-76coord: 188..200
score: 9.9
NoneNo IPR availablePANTHERPTHR24012:SF403POLYADENYLATE-BINDING PROTEIN RBP47Acoord: 60..168
score: 9.9E-76coord: 188..200
score: 9.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla020692Cucumber (Gy14) v2cgybwmB119
Cla020692Cucumber (Gy14) v2cgybwmB295
Cla020692Melon (DHL92) v3.6.1medwmB311
Cla020692Melon (DHL92) v3.6.1medwmB512
Cla020692Silver-seed gourdcarwmB0102
Cla020692Silver-seed gourdcarwmB0769
Cla020692Cucumber (Chinese Long) v3cucwmB138
Cla020692Cucumber (Chinese Long) v3cucwmB332
Cla020692Watermelon (97103) v2wmwmbB207
Cla020692Watermelon (97103) v2wmwmbB222
Cla020692Wax gourdwgowmB329
Cla020692Wax gourdwgowmB623
Cla020692Watermelon (97103) v1wmwmB059
Cla020692Cucumber (Gy14) v1cgywmB196
Cla020692Cucumber (Gy14) v1cgywmB434
Cla020692Cucurbita maxima (Rimu)cmawmB026
Cla020692Cucurbita maxima (Rimu)cmawmB159
Cla020692Cucurbita maxima (Rimu)cmawmB440
Cla020692Cucurbita moschata (Rifu)cmowmB018
Cla020692Cucurbita moschata (Rifu)cmowmB145
Cla020692Cucurbita moschata (Rifu)cmowmB434
Cla020692Cucurbita moschata (Rifu)cmowmB753
Cla020692Melon (DHL92) v3.5.1mewmB317
Cla020692Melon (DHL92) v3.5.1mewmB527
Cla020692Watermelon (Charleston Gray)wcgwmB285
Cla020692Watermelon (Charleston Gray)wcgwmB412
Cla020692Cucumber (Chinese Long) v2cuwmB126
Cla020692Cucumber (Chinese Long) v2cuwmB319
Cla020692Cucurbita pepo (Zucchini)cpewmB559
Cla020692Cucurbita pepo (Zucchini)cpewmB765
Cla020692Cucurbita pepo (Zucchini)cpewmB795
Cla020692Bottle gourd (USVL1VR-Ls)lsiwmB316
Cla020692Bottle gourd (USVL1VR-Ls)lsiwmB480