Cla020559 (gene) Watermelon (97103) v1

Overview
NameCla020559
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGATA transcription factor 8 (AHRD V1 *--- GATA8_ARATH)
LocationChr5 : 28709702 .. 28711713 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGGAAATAACTTCGTCGATGAGATAGATTGCGGCAGTTTCTTCGACCAAATCGACGACCTTCTCGATTTTCCAGTGGAGGATGTCGACGCCGGCTTGCCTCCGGCGAAGGGCGGTGACTCGGCCAACTCATTTCCAACCATTTGGTCTACTCACTCCGAGTCACTACCCGGTTCCGACTCGGTCTTCTCCGCCAATAGCAACACCGATTTGTCGGCCGAGCTCTCTGTTCCGGTTAGTACTGCTATGCTACACTTTCCTTCACCTGCGGGTGTTTCTATGATTCCTCTTCTGAACCGACCGCCGACACCGCCGGCCCGGTCCAATATTGATTTATTTTGAATCCAGTAATTTATTAATTTTTTCATTTGAAAGAAAATTAAGTTTTTTTTTTTTTTGGGTAACATTGTTTTAATTTGAAATGAATTGGAATAACTTTAACATATTTTCCCAGAAAGAATTTTCAACACTTCAATTTTCAAATTAAATTGACAAGCGGCGTTGGTTTAATTTTGGTGGATTTTGACTTTTTTTTTTTTGTGTGTGTATTGAAATGAATTTAAGATGGTGTCGTCATAGGATATAATTAGTGTAAGAAATCGACAAGATTATGTTTTAATTGATTAGGTTGTCCACCTGGCAGGCCACGTGGGGGCCATTTTGTGGAGGTGCTTTGTCATTTTACCCTTGATTGTAGGCGCCAAACACACATGGAAAATTCATTTAAAATAAAGAATTTTCTATTCGTTCAACAAATTTCAAAATCACCTTTCAATTAAAGGGTATTTTAGTCATTTCATTGGAGTCTTTTTTGGGATCTGTTCATTATAATATGAGGAATGATAAGCTAACATAATATTCACAATTTCTACCTATTCACATAATAAAATAATATTATCTTATAATTATTATCATTTTTACATGCACGTGACAGTTGACTAGTGGCACATGTTTTGTTTCTCTAGTTGGATTTTGTTATGTTTGTAAATTCAAATATAAAATGCCCATTATACAATATCACTTTTAATAACCAATGAAACCATATATATATATATATATATTTTTTTTAATTTTATTTATCATAAAGTTTGCATCACATCAATGTTTTTAGTTAGTAATGGCAGTAGGATTTAGGTTAAATTACAAAATTTGTGCCTATAGCTCAAAGAAAATTAGACTAAAAAATTAGAATTTAGTCCTAATAAAAATTTAGATAATTGCATTGGTAGGTTATAACTATCTTTCTGCAACTCATTCTAATCCAATCACATTTTGCCATGTGACAAAATATTTTTTTCAAAAAAAAAAAAGAAAAAATATTTTTGAATTGATGCAACTTAGTTCCACCTAAGTATTACTCAAAATTTTATCAAATTATCAAGACTAAGTTTCAACTTTTACAAAACTATAAGGACCGAGTGTGTGATTAAAGTCTTTGTTGTTATTTGATTAGGTGAGTTAATTATTTGGTTTGTTTGCAGTATGAGGACATTGTTCAACTGGAATGGCTTTCAAACTTTGTTGAGGATTCATTCTGTGGTGGAAGCCTGACAATGAACAAAGAAGAGCCCAAGGATTTGACTCATAACCAATTCCAAACCTCTAGCCCAGTTTCTGTTCTTGAAAGCAGCAGCTCTTGCTCTAGTGACAAGAGCCTGCAACCCCGCAGCCCCGAACCGACCGTCGCCACTCCAGGTCAGCAGCGTGGCCGTGCACGTAGCAAACGCCCTCGCCCTGCAACCTTCAGTCCCCGGCCCCCAATTCAGCTTATTTCCCCTGCCTCCTCCGTCACCGAAACAACCACCCCTGACCAGGCATTGCAGCTTGTTCCTAAGGCCTCCTCAGACACCGAGAACTTTGCGGAGTCCCGGCCTCTGATAAAAATGCCGAAGCACGGCGCAGGAGAAGAACAAGAAAATCAAGTTATCTTTTTCGCTCGCGGCCCCAATGGAGGCAGGGAACCAAAGTTCAGCATCCTCACAATCAGTAAGAAAATGTATGCATTGTGA

mRNA sequence

ATGATCGGAAATAACTTCGTCGATGAGATAGATTGCGGCAGTTTCTTCGACCAAATCGACGACCTTCTCGATTTTCCAGTGGAGGATGTCGACGCCGGCTTGCCTCCGGCGAAGGGCGGTGACTCGGCCAACTCATTTCCAACCATTTGGTCTACTCACTCCGAGTCACTACCCGGTTCCGACTCGGTCTTCTCCGCCAATAGCAACACCGATTTGTCGGCCGAGCTCTCTGTTCCGTATGAGGACATTGTTCAACTGGAATGGCTTTCAAACTTTGTTGAGGATTCATTCTGTGGTGGAAGCCTGACAATGAACAAAGAAGAGCCCAAGGATTTGACTCATAACCAATTCCAAACCTCTAGCCCAGTTTCTGTTCTTGAAAGCAGCAGCTCTTGCTCTAGTGACAAGAGCCTGCAACCCCGCAGCCCCGAACCGACCGTCGCCACTCCAGGTCAGCAGCGTGGCCGTGCACGTAGCAAACGCCCTCGCCCTGCAACCTTCAGTCCCCGGCCCCCAATTCAGCTTATTTCCCCTGCCTCCTCCGTCACCGAAACAACCACCCCTGACCAGGCATTGCAGCTTGTTCCTAAGGCCTCCTCAGACACCGAGAACTTTGCGGAGTCCCGGCCTCTGATAAAAATGCCGAAGCACGGCGCAGGAGAAGAACAAGAAAATCAAGTTATCTTTTTCGCTCGCGGCCCCAATGGAGGCAGGGAACCAAAGTTCAGCATCCTCACAATCAGTAAGAAAATGTATGCATTGTGA

Coding sequence (CDS)

ATGATCGGAAATAACTTCGTCGATGAGATAGATTGCGGCAGTTTCTTCGACCAAATCGACGACCTTCTCGATTTTCCAGTGGAGGATGTCGACGCCGGCTTGCCTCCGGCGAAGGGCGGTGACTCGGCCAACTCATTTCCAACCATTTGGTCTACTCACTCCGAGTCACTACCCGGTTCCGACTCGGTCTTCTCCGCCAATAGCAACACCGATTTGTCGGCCGAGCTCTCTGTTCCGTATGAGGACATTGTTCAACTGGAATGGCTTTCAAACTTTGTTGAGGATTCATTCTGTGGTGGAAGCCTGACAATGAACAAAGAAGAGCCCAAGGATTTGACTCATAACCAATTCCAAACCTCTAGCCCAGTTTCTGTTCTTGAAAGCAGCAGCTCTTGCTCTAGTGACAAGAGCCTGCAACCCCGCAGCCCCGAACCGACCGTCGCCACTCCAGGTCAGCAGCGTGGCCGTGCACGTAGCAAACGCCCTCGCCCTGCAACCTTCAGTCCCCGGCCCCCAATTCAGCTTATTTCCCCTGCCTCCTCCGTCACCGAAACAACCACCCCTGACCAGGCATTGCAGCTTGTTCCTAAGGCCTCCTCAGACACCGAGAACTTTGCGGAGTCCCGGCCTCTGATAAAAATGCCGAAGCACGGCGCAGGAGAAGAACAAGAAAATCAAGTTATCTTTTTCGCTCGCGGCCCCAATGGAGGCAGGGAACCAAAGTTCAGCATCCTCACAATCAGTAAGAAAATGTATGCATTGTGA

Protein sequence

MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGSDSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLTHNQFQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQLISPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVIFFARGPNGGREPKFSILTISKKMYAL
Homology
[Close]
BLAST of Cla020559 vs. Swiss-Prot
Match: GATA8_ARATH (GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.7e-31
Identity = 77/168 (45.83%), Postives = 109/168 (64.88%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLP-G 60
           MIG +F +++DCG+FFD +DDL+DFP  D+D G     G   ++SFPTIW+TH ++ P  
Sbjct: 1   MIGTSFPEDLDCGNFFDNMDDLMDFPGGDIDVGF----GIGDSDSFPTIWTTHHDTWPAA 60

Query: 61  SDSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFC---GGSLTMNKEEPKDLTHNQ 120
           SD +FS+N+N+D S EL VP+EDIV++E   +FVE++       S + N +     +H+Q
Sbjct: 61  SDPLFSSNTNSDSSPELYVPFEDIVKVERPPSFVEETLVEKKEDSFSTNTDSSS--SHSQ 120

Query: 121 FQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRP 165
           F++SSPVSVLESSSS S   +        ++  PG + GR R+KRPRP
Sbjct: 121 FRSSSPVSVLESSSSSSQTTN------TTSLVLPG-KHGRPRTKRPRP 155

[Close]
BLAST of Cla020559 vs. TrEMBL
Match: A0A0A0KRL5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622830 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 2.4e-111
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           MIGNNFVDEIDCGSFFD IDDLLDFPVEDVDAGLPPAKGGDSANSFPTIW THSESLPGS
Sbjct: 1   MIGNNFVDEIDCGSFFDHIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWPTHSESLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLTH--NQFQ 120
           DSVFSANSN+DLSAELSVPYEDIVQL+WL+NFVEDSFCG  LTMNKEE KDLTH  NQFQ
Sbjct: 61  DSVFSANSNSDLSAELSVPYEDIVQLDWLANFVEDSFCGEGLTMNKEEVKDLTHNNNQFQ 120

Query: 121 TSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPP-IQLIS 180
           TSSPVSVLESSSSCSSDK+LQPRSPEPTVATPGQQRGRARSKRPRPATFSPR P IQ IS
Sbjct: 121 TSSPVSVLESSSSCSSDKTLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRSPIIQRIS 180

Query: 181 PASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAG 221
           PASSVTETTTPDQALQLVPKA+SDT+NFAESRPL+K+PKHGAG
Sbjct: 181 PASSVTETTTPDQALQLVPKAASDTDNFAESRPLVKLPKHGAG 223

[Close]
BLAST of Cla020559 vs. TrEMBL
Match: A0A067E1G0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016706mg PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.5e-76
Identity = 162/233 (69.53%), Postives = 186/233 (79.83%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           MIG NF+DEIDCGSFFD IDDLLDFP EDV+AGLP A     +NSFP+IW T S+SLPGS
Sbjct: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNA----DSNSFPSIWPTQSDSLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLT-----HN 120
           DSVFS NS+TDLS +LSVPYEDIVQLEWLSNFVEDSF GGSLTM+K+E   +T     HN
Sbjct: 61  DSVFS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHN 120

Query: 121 QFQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQL 180
           QFQTSSPVSVLESSSSCS +K++   SPE T   PG +RGRARSKRPRPATF+PRPP+QL
Sbjct: 121 QFQTSSPVSVLESSSSCSGEKTVL-GSPETT--APG-RRGRARSKRPRPATFNPRPPVQL 180

Query: 181 ISPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           +SP SSVTE T P   L + PKASSD+ENFAESR +IK+PK    E ++ + I
Sbjct: 181 VSPTSSVTE-TQPQHRL-IAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKI 222

[Close]
BLAST of Cla020559 vs. TrEMBL
Match: V4TDM9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032018mg PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.5e-76
Identity = 162/233 (69.53%), Postives = 186/233 (79.83%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           MIG NF+DEIDCGSFFD IDDLLDFP EDV+AGLP A     +NSFP+IW T S+SLPGS
Sbjct: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNA----DSNSFPSIWPTQSDSLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLT-----HN 120
           DSVFS NS+TDLS +LSVPYEDIVQLEWLSNFVEDSF GGSLTM+K+E   +T     HN
Sbjct: 61  DSVFS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHN 120

Query: 121 QFQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQL 180
           QFQTSSPVSVLESSSSCS +K++   SPE T   PG +RGRARSKRPRPATF+PRPP+QL
Sbjct: 121 QFQTSSPVSVLESSSSCSGEKTVL-GSPETT--APG-RRGRARSKRPRPATFNPRPPVQL 180

Query: 181 ISPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           +SP SSVTE T P   L + PKASSD+ENFAESR +IK+PK    E ++ + I
Sbjct: 181 VSPTSSVTE-TQPQHRL-IAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKI 222

[Close]
BLAST of Cla020559 vs. TrEMBL
Match: A0A061FP83_THECC (Plant-specific GATA-type zinc finger transcription factor family protein isoform 1 OS=Theobroma cacao GN=TCM_043158 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.3e-74
Identity = 157/233 (67.38%), Postives = 182/233 (78.11%), Query Frame = 1 

Query: 1   MIG-NNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPG 60
           MIG  NF+DEIDCGSFFD IDDLLDFP EDV+AGL  +    +A++FP+IW+THSESLPG
Sbjct: 74  MIGPTNFIDEIDCGSFFDHIDDLLDFPNEDVEAGLSASDSAVNASAFPSIWTTHSESLPG 133

Query: 61  SDSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEE----PKDLTHN 120
           SDSVFS NS +DLSAELSVPYEDIVQLEWLSNFV+DS CG SLT+ KEE     KD + +
Sbjct: 134 SDSVFSNNSASDLSAELSVPYEDIVQLEWLSNFVDDSQCGASLTIKKEESSSITKDSSQH 193

Query: 121 QFQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQL 180
           QFQTSSPVSVLESSSSCS +K+L PRSPE   A PG +RGRARSKRPRP TF+PRP IQL
Sbjct: 194 QFQTSSPVSVLESSSSCSGEKTL-PRSPE--TAAPG-RRGRARSKRPRPTTFNPRPAIQL 253

Query: 181 ISPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           ISP SSV E   P     +VPK  SD+EN+AESR LIK+P+    E ++ + I
Sbjct: 254 ISPTSSVNENDIPQPF--VVPKVPSDSENYAESRLLIKIPRQVNPEHKKKKKI 300

[Close]
BLAST of Cla020559 vs. TrEMBL
Match: A0A061FV65_THECC (Plant-specific GATA-type zinc finger transcription factor family protein isoform 2 OS=Theobroma cacao GN=TCM_043158 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 2.3e-74
Identity = 157/233 (67.38%), Postives = 182/233 (78.11%), Query Frame = 1 

Query: 1   MIG-NNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPG 60
           MIG  NF+DEIDCGSFFD IDDLLDFP EDV+AGL  +    +A++FP+IW+THSESLPG
Sbjct: 1   MIGPTNFIDEIDCGSFFDHIDDLLDFPNEDVEAGLSASDSAVNASAFPSIWTTHSESLPG 60

Query: 61  SDSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEE----PKDLTHN 120
           SDSVFS NS +DLSAELSVPYEDIVQLEWLSNFV+DS CG SLT+ KEE     KD + +
Sbjct: 61  SDSVFSNNSASDLSAELSVPYEDIVQLEWLSNFVDDSQCGASLTIKKEESSSITKDSSQH 120

Query: 121 QFQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQL 180
           QFQTSSPVSVLESSSSCS +K+L PRSPE   A PG +RGRARSKRPRP TF+PRP IQL
Sbjct: 121 QFQTSSPVSVLESSSSCSGEKTL-PRSPE--TAAPG-RRGRARSKRPRPTTFNPRPAIQL 180

Query: 181 ISPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           ISP SSV E   P     +VPK  SD+EN+AESR LIK+P+    E ++ + I
Sbjct: 181 ISPTSSVNENDIPQPF--VVPKVPSDSENYAESRLLIKIPRQVNPEHKKKKKI 227

[Close]
BLAST of Cla020559 vs. NCBI nr
Match: gi|659092069|ref|XP_008446884.1| (PREDICTED: GATA transcription factor 8 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 1.0e-115
Identity = 206/219 (94.06%), Postives = 213/219 (97.26%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVD GLPPAKGGDS NSFPTIW THSESLPGS
Sbjct: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDTGLPPAKGGDSTNSFPTIWPTHSESLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLTHNQFQTS 120
           DSVFSANSN+DLSAELSVPYEDIVQL+WL+NFVEDSFCGGSLTMNKEEPKDLTHNQFQTS
Sbjct: 61  DSVFSANSNSDLSAELSVPYEDIVQLDWLANFVEDSFCGGSLTMNKEEPKDLTHNQFQTS 120

Query: 121 SPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQLISPAS 180
           SPVSVLESSSSCSSDK+LQPRSPEPTVATPGQQRGRARSKRPRPATF+PRPPIQLISPAS
Sbjct: 121 SPVSVLESSSSCSSDKTLQPRSPEPTVATPGQQRGRARSKRPRPATFNPRPPIQLISPAS 180

Query: 181 SVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGA 220
           SVTETTTPDQ LQLVPKA SDTENFAESRP +K+PKHGA
Sbjct: 181 SVTETTTPDQTLQLVPKAPSDTENFAESRPSVKLPKHGA 219

[Close]
BLAST of Cla020559 vs. NCBI nr
Match: gi|449449346|ref|XP_004142426.1| (PREDICTED: GATA transcription factor 8 [Cucumis sativus])

HSP 1 Score: 409.8 bits (1052), Expect = 3.4e-111
Identity = 205/223 (91.93%), Postives = 213/223 (95.52%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           MIGNNFVDEIDCGSFFD IDDLLDFPVEDVDAGLPPAKGGDSANSFPTIW THSESLPGS
Sbjct: 1   MIGNNFVDEIDCGSFFDHIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWPTHSESLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLTH--NQFQ 120
           DSVFSANSN+DLSAELSVPYEDIVQL+WL+NFVEDSFCG  LTMNKEE KDLTH  NQFQ
Sbjct: 61  DSVFSANSNSDLSAELSVPYEDIVQLDWLANFVEDSFCGEGLTMNKEEVKDLTHNNNQFQ 120

Query: 121 TSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPP-IQLIS 180
           TSSPVSVLESSSSCSSDK+LQPRSPEPTVATPGQQRGRARSKRPRPATFSPR P IQ IS
Sbjct: 121 TSSPVSVLESSSSCSSDKTLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRSPIIQRIS 180

Query: 181 PASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAG 221
           PASSVTETTTPDQALQLVPKA+SDT+NFAESRPL+K+PKHGAG
Sbjct: 181 PASSVTETTTPDQALQLVPKAASDTDNFAESRPLVKLPKHGAG 223

[Close]
BLAST of Cla020559 vs. NCBI nr
Match: gi|1009120985|ref|XP_015877215.1| (PREDICTED: GATA transcription factor 8-like isoform X1 [Ziziphus jujuba])

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 159/232 (68.53%), Postives = 184/232 (79.31%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           M+G+NF+DEIDCGSFFD IDDLLDFP EDV+AGL P    DS ++FPTIW T S+SLPGS
Sbjct: 63  MVGSNFIDEIDCGSFFDHIDDLLDFPCEDVEAGLGP--NADSNSAFPTIWPTQSDSLPGS 122

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPK----DLTHNQ 120
           DSVFSANS +DLSAELSVPYEDIVQ+EWLS FVEDSF GGSLT+NK++        +H+Q
Sbjct: 123 DSVFSANSASDLSAELSVPYEDIVQMEWLSKFVEDSFSGGSLTINKQDDSSNKDSSSHHQ 182

Query: 121 FQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQLI 180
           FQTSSPVSVLESSSSCS DK++ PRSPE     PG +RGRARSKRPRPATF+PRP IQLI
Sbjct: 183 FQTSSPVSVLESSSSCSGDKNV-PRSPEG--VAPG-RRGRARSKRPRPATFNPRPAIQLI 242

Query: 181 SPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           SP SS TET  P     + PK  SD+ENFAESRPLIK+PK  + E ++ + I
Sbjct: 243 SPTSSFTETPQP----LITPKGCSDSENFAESRPLIKLPKQVSTEHKKKKKI 284

[Close]
BLAST of Cla020559 vs. NCBI nr
Match: gi|1009120987|ref|XP_015877217.1| (PREDICTED: GATA transcription factor 8-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 297.7 bits (761), Expect = 1.9e-77
Identity = 159/232 (68.53%), Postives = 184/232 (79.31%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           M+G+NF+DEIDCGSFFD IDDLLDFP EDV+AGL P    DS ++FPTIW T S+SLPGS
Sbjct: 1   MVGSNFIDEIDCGSFFDHIDDLLDFPCEDVEAGLGP--NADSNSAFPTIWPTQSDSLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPK----DLTHNQ 120
           DSVFSANS +DLSAELSVPYEDIVQ+EWLS FVEDSF GGSLT+NK++        +H+Q
Sbjct: 61  DSVFSANSASDLSAELSVPYEDIVQMEWLSKFVEDSFSGGSLTINKQDDSSNKDSSSHHQ 120

Query: 121 FQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQLI 180
           FQTSSPVSVLESSSSCS DK++ PRSPE     PG +RGRARSKRPRPATF+PRP IQLI
Sbjct: 121 FQTSSPVSVLESSSSCSGDKNV-PRSPEG--VAPG-RRGRARSKRPRPATFNPRPAIQLI 180

Query: 181 SPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           SP SS TET  P     + PK  SD+ENFAESRPLIK+PK  + E ++ + I
Sbjct: 181 SPTSSFTETPQP----LITPKGCSDSENFAESRPLIKLPKQVSTEHKKKKKI 222

[Close]
BLAST of Cla020559 vs. NCBI nr
Match: gi|641825409|gb|KDO44680.1| (hypothetical protein CISIN_1g016706mg [Citrus sinensis])

HSP 1 Score: 292.4 bits (747), Expect = 7.9e-76
Identity = 162/233 (69.53%), Postives = 186/233 (79.83%), Query Frame = 1 

Query: 1   MIGNNFVDEIDCGSFFDQIDDLLDFPVEDVDAGLPPAKGGDSANSFPTIWSTHSESLPGS 60
           MIG NF+DEIDCGSFFD IDDLLDFP EDV+AGLP A     +NSFP+IW T S+SLPGS
Sbjct: 1   MIGTNFMDEIDCGSFFDHIDDLLDFPNEDVEAGLPNA----DSNSFPSIWPTQSDSLPGS 60

Query: 61  DSVFSANSNTDLSAELSVPYEDIVQLEWLSNFVEDSFCGGSLTMNKEEPKDLT-----HN 120
           DSVFS NS+TDLS +LSVPYEDIVQLEWLSNFVEDSF GGSLTM+K+E   +T     HN
Sbjct: 61  DSVFS-NSSTDLSTQLSVPYEDIVQLEWLSNFVEDSFSGGSLTMSKQESSTITKDDSSHN 120

Query: 121 QFQTSSPVSVLESSSSCSSDKSLQPRSPEPTVATPGQQRGRARSKRPRPATFSPRPPIQL 180
           QFQTSSPVSVLESSSSCS +K++   SPE T   PG +RGRARSKRPRPATF+PRPP+QL
Sbjct: 121 QFQTSSPVSVLESSSSCSGEKTVL-GSPETT--APG-RRGRARSKRPRPATFNPRPPVQL 180

Query: 181 ISPASSVTETTTPDQALQLVPKASSDTENFAESRPLIKMPKHGAGEEQENQVI 229
           +SP SSVTE T P   L + PKASSD+ENFAESR +IK+PK    E ++ + I
Sbjct: 181 VSPTSSVTE-TQPQHRL-IAPKASSDSENFAESRLVIKIPKQFNPEHKKKKKI 222

The following BLAST results are available for this feature:
BLAST of Cla020559 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GATA8_ARATH7.7e-3145.83GATA transcription factor 8 OS=Arabidopsis thaliana GN=GATA8 PE=2 SV=1[more]
BLAST of Cla020559 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRL5_CUCSA2.4e-11191.93Uncharacterized protein OS=Cucumis sativus GN=Csa_5G622830 PE=4 SV=1[more]
A0A067E1G0_CITSI5.5e-7669.53Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016706mg PE=4 SV=1[more]
V4TDM9_9ROSI5.5e-7669.53Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032018mg PE=4 SV=1[more]
A0A061FP83_THECC2.3e-7467.38Plant-specific GATA-type zinc finger transcription factor family protein isoform... [more]
A0A061FV65_THECC2.3e-7467.38Plant-specific GATA-type zinc finger transcription factor family protein isoform... [more]
BLAST of Cla020559 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659092069|ref|XP_008446884.1|1.0e-11594.06PREDICTED: GATA transcription factor 8 [Cucumis melo][more]
gi|449449346|ref|XP_004142426.1|3.4e-11191.93PREDICTED: GATA transcription factor 8 [Cucumis sativus][more]
gi|1009120985|ref|XP_015877215.1|1.9e-7768.53PREDICTED: GATA transcription factor 8-like isoform X1 [Ziziphus jujuba][more]
gi|1009120987|ref|XP_015877217.1|1.9e-7768.53PREDICTED: GATA transcription factor 8-like isoform X2 [Ziziphus jujuba][more]
gi|641825409|gb|KDO44680.1|7.9e-7669.53hypothetical protein CISIN_1g016706mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009845 seed germination
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020559Cla020559.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10071TRANSCRIPTION FACTOR GATA GATA BINDING FACTORcoord: 1..223
score: 3.2
NoneNo IPR availablePANTHERPTHR10071:SF194GATA TRANSCRIPTION FACTOR 8coord: 1..223
score: 3.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla020559MELO3C019804Melon (DHL92) v3.5.1mewmB321
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla020559Cucumber (Gy14) v2cgybwmB377
Cla020559Cucumber (Gy14) v2cgybwmB462
Cla020559Melon (DHL92) v3.6.1medwmB061
Cla020559Melon (DHL92) v3.6.1medwmB318
Cla020559Silver-seed gourdcarwmB0255
Cla020559Silver-seed gourdcarwmB0480
Cla020559Silver-seed gourdcarwmB0683
Cla020559Silver-seed gourdcarwmB0842
Cla020559Cucumber (Chinese Long) v3cucwmB428
Cla020559Watermelon (97103) v2wmwmbB207
Cla020559Watermelon (97103) v2wmwmbB223
Cla020559Wax gourdwgowmB337
Cla020559Wax gourdwgowmB552
Cla020559Watermelon (97103) v1wmwmB060
Cla020559Watermelon (97103) v1wmwmB132
Cla020559Cucurbita maxima (Rimu)cmawmB267
Cla020559Cucumber (Gy14) v1cgywmB239
Cla020559Cucumber (Gy14) v1cgywmB559
Cla020559Cucumber (Gy14) v1cgywmB694
Cla020559Cucurbita maxima (Rimu)cmawmB372
Cla020559Cucurbita maxima (Rimu)cmawmB699
Cla020559Cucurbita maxima (Rimu)cmawmB708
Cla020559Cucurbita moschata (Rifu)cmowmB258
Cla020559Cucurbita moschata (Rifu)cmowmB365
Cla020559Cucurbita moschata (Rifu)cmowmB693
Cla020559Cucurbita moschata (Rifu)cmowmB704
Cla020559Melon (DHL92) v3.5.1mewmB061
Cla020559Watermelon (Charleston Gray)wcgwmB285
Cla020559Watermelon (Charleston Gray)wcgwmB413
Cla020559Cucumber (Chinese Long) v2cuwmB401
Cla020559Cucurbita pepo (Zucchini)cpewmB031
Cla020559Cucurbita pepo (Zucchini)cpewmB181
Cla020559Cucurbita pepo (Zucchini)cpewmB427
Cla020559Cucurbita pepo (Zucchini)cpewmB438
Cla020559Bottle gourd (USVL1VR-Ls)lsiwmB312
Cla020559Bottle gourd (USVL1VR-Ls)lsiwmB485