Cla020502 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTGATTTCTGGGTTCTAGACACTGGTAAGGTTCTCTACCATATTAAATACTTGCAATTGTAACGGATAGAAATTGCTTGTGTTTGAAGCATAACTATGTTTTCTATCCTTTGGTTCCCTTGTGTCTTCAAGATATCTGGCAATGGTCTGAGCTAACTAGTTTTGGTGATTTGCCTTCACCAAGGGACTTTGCTGCAGCATCTTCTTTTGGGAACCGGAAAATTGTCATGTGAGTAATAATATTTCCATTCTTCTTTGGCGTTATTTTTCTTTTTAGATATCCGTGGGTTGGGCCAGCTTACGTGCACCTCGATTAATCTCTCAGGATAATCCACTTGACTCTACAACATTTAGATGTCAAGGATATCCGTGAGTGTCTGCTCGACTAATCTTACGACACTCATGATACGACATTTGAGTACCCGTGAGTGTCTGGGCGTTAATCATCTCTTTTCATATCTTAAATTCAAATATGCTTAAATTGAGTGCAGGTATGGGGGCTGGGATGGTAAGAAGTGGTTGTCAGATGTATATGTCCTAGACACAAGTAATTCCTGTGGCTTCTGCTTCTTAGTTTCTTTTTCTTTTCTTTTCTTTTTTGTTTCCGAGTATTTCTCCTTTTGCTATTAGTCGTCTTCTTTTAAGTTATATTGTATGATTATTCTGTAAGTTTGTCATTTTTTTGGTAAGCAGTGTCACTTGAATGGACTGAACTTTCAGTTTATGGATCACTGCCTCCTCCAAGATGTGGCCATACAGCAATTATGCTTGAGAAAAGGTTGCTTGTCTATGGTGGAAGAGGTATGCTCACATGTAATACTTTTTCTACAGTTGGGTTTTCTAAACGATTTTCTCATTACCATTTGCACATTGAATACGTTTATATTTCATCAATGTATATGAGTACTGTGGTCTAGTGATGTATTATTCTTTTTTCTCTTTGATCTTAGAAATGATAGATTTGCTGAAAAATGAATTTCGTACATAGATAAGAAGAAATGGAGAAAGATTTGATATGACATTGAGTGTTGCAAGTAATTTTGAAGCAATTGATCTGTTTTTCCCCTTTGTATTTGGTTGTTTAGCTAGCTTGGTTCATCTCTTCCATGTTAGTAACACTTATGTTTTGCAAACTATAATAGAGACAGAACCTGTAAAGTGAAGGATTTTTAGAAAAAAAAAAATTTGGACCTTTTCAATTGATATATGCATATAGTACGGTAATGGTCATAAATGAGACAAAGCTTATGTATAGGGGCTTTGGCATTATTTGCATAGTCAATGCTTTTCTTTGATCTTCTAGTTGCAATTGCTGGATCTATTATGACCTATCTTTTTTATTGTGCCGTGCAAATTCAAAACAATCATTCCATGGTCCTAAATTTTGTTATCTTTTCTGCTATTTGTGTGTGGGTTTGGTGGAATATGTTTACTCTTCTTTAGGTGGTTTCCCTTGTTATAGGAGCATATGTAATTAGTTATTGTTTATGGTGGTCATTCTCTTGTTAGCATGCCTTATTCCTCTATGAGAATATGGTCGAACCTATAAAAGTGTGATATTGTGACCATTTGTGTGAAAGTTGTTTCTAGGGTGTTCTGTGAATCACTTTAAGAATAGGGGCATTATCCCGTTTGGACCCCAGGCATTGCAGAACGATTCAGCCCATGATCCATCCCCAAGCATTAGGCATCTCTGTATCAGGTGGCCTAAAGATAATTAAGTGTAATTGTAAACGTTGGAACTTTTCTGTCTTTGGAAATGTGTCCACACTTGGTAATCCTTTAGTTAAGTTTTAACCGTTGTTATTTCCAGGTTGTAAAAGGAGGCTACAAAATATTAAATTATAAGATTTCATTTTTTCAAGATTCATGAAAATTTTTCTTCCATGTGCTCCAGGATGTCTACTAAGAATGATGCTGGTTCATTTTCATTCACTAGCTTCTTACATTGTGAGAAATCATTGTGCTGGGAGACTAATATTTGGATTGCTTTCTTGTTTCAGACCATGTTATAAAATAGTTATCATTTCTCACATGTCTGATACTGTTTTTAATCACCTTAACCTAGGGGTTGAGAGTACTTACACTGGAAAATCACTATTTTATGCTTTAGTTGTGCTACATTGAAACCCTTTTTATTTTGGTATGATTCCTTATTTATAGTTGAATAATCTTGTTGGTAATAAATCTATATCACCCTATTTAACTTTTTCTTCCTTGTTTCAAATGTGGTTCTGTTGCTTTGCGTTTTGCTGCTAAACTAATTGACCCTTTTGAACTGATAGGAGGTGGTGGGCCGATACTGGGTGACTTATGGGCTTTGAAAGGACTAATTGAAGAAGGTCAGTATATGGTTACTTTTTATTTCGTATTTTTATAATAAATATATATGTATATATAACCTCATAAAAGAGAAGTTTTCTGCTTTTATTGTCATGTTCCATCATTTTTTTAATGACCATTTAGATCTGAGAAATGAAGTCATTTTGCAGATCTTGCTGATTTTCTTTGACTTTATTGTTTCATTACCCTTGAGATGATGAGTGATCACCGTTAAGATATATATTCTAAGATTTGGTTTTTCTTGCTTTCATTGTGAAGTCATGACTTCTTTTTCATGGTTACAAGGTCCAATTTCAAGTTGTTGCCCCTTGGCTGCATTTTAAGGATATCACATCCTACTTCTTTGTAACCTGTTTGTTCAATACCTTTTTTTGTTTTCTTGTCCCAATTATAGATGGGTATGTGTTATTTCTTTGTTTCTCAGCTTCACTGTGTCCATAGACTATAGTATATTCAATAGAAACCATTATAGGACATTCTAGATACATGGAACGGTGAAACGCTGTTGGAGCAGTAATGTTGTCTGCTTGGTTTGTTTGTTTGTAGATTATATTGCGTGAGGTGAAGAAGTTCAGGCTCTATGGTTTCATATGGAATTTCTCTTTGAGGCCCTGTATGTTTGCATTTTTTAACCAGCTCATGAAATGTTTCTCGGTTTTGTGATAGAGAATGAAAGCCCTGGATGGACTCAGCTGAAGCTTCCAGGTCAAGGTCCTTCTCCTCGCTGTGGCCATACCATTACATCGGGTGGACATTATGTAATTACATTTTCCAGAATTGTTGTTCTTTTTCACTACTTCATTTCAAGCTTCTCGTCCCGTTAGTGACTTCCATTATCAGCTTCATCAGAAATGAAAATTGTTAAGGAGCGGTCAAGTTGTAAACTTCTATTGGTGGCTAGTATATCATCTTTTAATCCAAAATGGGATGAAGAAAGAAGTTTGGTTGAAGTAGGGTACGTTGGAGTTTTTTCTTTTAATGAACAAAATTGTTTCAAGAAAGACAATTTACTCAAGATGAAATAGACACAGAAGAGCAAGGTGAAGATAAGTTGTCTTCCCCCACTGTTCCAGAGATCTAAAGGTAGAAAATGAGAAAGAGAGAATATACTTATTCTCCCATTAGTTTCAAACAAGCTTCCAGACCAAGATATAGTGAGTTGATTCATATCTTCCCTCTTGCTCCTGAATTCTTGACTGAAAAGATGTTAATGTAGGAAATCCTCAATGTTACTATGGCTTCACAACTGGAGATTGAAAATGCCAAAAATCTTTAACCAAATTCCCGTGGGGAAATGACATTAGGGGAAGTGATGATGTTGAGATTTTATTTTCACTATTAACTGTTACTCAGTTATCTTTCCAGTAACACATTACATCATTTTACAGGGCTATCATTATTTCCCTTGAATTTAAAGCCTTTTGTTCTTTCATTGCTATTCTTCTTGGATATAACCCCCTTCTTGTCTTAGCAGCTACTGTTATTTGGAGGACATGGGACTGGTGGTTGGCTGAGTCGCTATGACGTTTACCACAATGATTGCATTGTGTTGGACAGGGGTGAGTGCATCAATACCTCCTTATGCTGCTAAAAGATAATCTCTTTGATGGTTTAAAGATGGTGAGGTGAGGAAAGAGGTGAATTAGATACTCCTTGATTTTTTAGTTTAGGACTTCATACGCCAACTTTTAAATGTAACAAAAGAAATCTGAAGGAGAACAGTTTGTGCGCTCCATTAAAACCTGAAACTTGTCAAACTTTCCTGATATGATTGATGACCATCTTTGCTTCATCTATTGAATGGATTACAGTTCTGTCGTGAGTAACCTTTTTCTCTTTGAAATGCAGTGACTGCTCAGTGGAAACGGTTGCCTACTGGAAATGAAGCTCCTTCAGCACGGGCATACCATACAATGAACTGTATTGGATCACGTTATTTGTTATTTGGAGGTTTTGATGGGAAATCGACCTTTGGCGATTTGTGGTGGTTAGTTACTGAAGGTATTTAA ATGGGTGATTTCTGGGTTCTAGACACTGATATCTGGCAATGGTCTGAGCTAACTAGTTTTGGTGATTTGCCTTCACCAAGGGACTTTGCTGCAGCATCTTCTTTTGGGAACCGGAAAATTGTCATGTATGGGGGCTGGGATGGTAAGAAGTGGTTGTCAGATGTATATGTCCTAGACACAATGTCACTTGAATGGACTGAACTTTCAGTTTATGGATCACTGCCTCCTCCAAGATGTGGCCATACAGCAATTATGCTTGAGAAAAGGTTGCTTGTCTATGGTGGAAGAGGAGGTGGTGGGCCGATACTGGGTGACTTATGGGCTTTGAAAGGACTAATTGAAGAAGTGACTGCTCAGTGGAAACGGTTGCCTACTGGAAATGAAGCTCCTTCAGCACGGGCATACCATACAATGAACTGTATTGGATCACGTTATTTGTTATTTGGAGGTTTTGATGGGAAATCGACCTTTGGCGATTTGTGGTGGTTAGTTACTGAAGGTATTTAA ATGGGTGATTTCTGGGTTCTAGACACTGATATCTGGCAATGGTCTGAGCTAACTAGTTTTGGTGATTTGCCTTCACCAAGGGACTTTGCTGCAGCATCTTCTTTTGGGAACCGGAAAATTGTCATGTATGGGGGCTGGGATGGTAAGAAGTGGTTGTCAGATGTATATGTCCTAGACACAATGTCACTTGAATGGACTGAACTTTCAGTTTATGGATCACTGCCTCCTCCAAGATGTGGCCATACAGCAATTATGCTTGAGAAAAGGTTGCTTGTCTATGGTGGAAGAGGAGGTGGTGGGCCGATACTGGGTGACTTATGGGCTTTGAAAGGACTAATTGAAGAAGTGACTGCTCAGTGGAAACGGTTGCCTACTGGAAATGAAGCTCCTTCAGCACGGGCATACCATACAATGAACTGTATTGGATCACGTTATTTGTTATTTGGAGGTTTTGATGGGAAATCGACCTTTGGCGATTTGTGGTGGTTAGTTACTGAAGGTATTTAA MGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASSFGNRKIVMYGGWDGKKWLSDVYVLDTMSLEWTELSVYGSLPPPRCGHTAIMLEKRLLVYGGRGGGGPILGDLWALKGLIEEVTAQWKRLPTGNEAPSARAYHTMNCIGSRYLLFGGFDGKSTFGDLWWLVTEGI
BLAST of Cla020502 vs. Swiss-Prot
Match: RNGB_DICDI (RING finger protein B OS=Dictyostelium discoideum GN=rngB PE=2 SV=2) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 51/151 (33.77%), Postives = 76/151 (50.33%), Query Frame = 1
BLAST of Cla020502 vs. Swiss-Prot
Match: TEA1_SCHPO (Tip elongation aberrant protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tea1 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 3.0e-15 Identity = 47/148 (31.76%), Postives = 72/148 (48.65%), Query Frame = 1
BLAST of Cla020502 vs. Swiss-Prot
Match: DYHA_CHLRE (Dynein alpha chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA11 PE=3 SV=2) HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11 Identity = 55/159 (34.59%), Postives = 73/159 (45.91%), Query Frame = 1
BLAST of Cla020502 vs. Swiss-Prot
Match: RABEK_XENLA (Rab9 effector protein with kelch motifs OS=Xenopus laevis GN=rabepk PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10 Identity = 47/164 (28.66%), Postives = 72/164 (43.90%), Query Frame = 1
HSP 2 Score: 46.2 bits (108), Expect = 4.1e-04 Identity = 26/84 (30.95%), Postives = 39/84 (46.43%), Query Frame = 1
BLAST of Cla020502 vs. Swiss-Prot
Match: TYW23_ARATH (tRNA wybutosine-synthesizing protein 2/3/4 OS=Arabidopsis thaliana GN=At4g04670 PE=2 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.9e-10 Identity = 41/138 (29.71%), Postives = 63/138 (45.65%), Query Frame = 1
BLAST of Cla020502 vs. TrEMBL
Match: M4CM37_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 6.0e-79 Identity = 137/167 (82.04%), Postives = 152/167 (91.02%), Query Frame = 1
BLAST of Cla020502 vs. TrEMBL
Match: M4CM35_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 3.0e-78 Identity = 137/167 (82.04%), Postives = 151/167 (90.42%), Query Frame = 1
BLAST of Cla020502 vs. TrEMBL
Match: M4CM35_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 4.9e-49 Identity = 99/166 (59.64%), Postives = 114/166 (68.67%), Query Frame = 1
HSP 2 Score: 289.3 bits (739), Expect = 3.1e-75 Identity = 127/157 (80.89%), Postives = 142/157 (90.45%), Query Frame = 1
BLAST of Cla020502 vs. TrEMBL
Match: N1QS48_AEGTA (Uncharacterized protein OS=Aegilops tauschii GN=F775_07269 PE=4 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 5.9e-10 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 1
HSP 2 Score: 261.9 bits (668), Expect = 5.3e-67 Identity = 126/152 (82.89%), Postives = 129/152 (84.87%), Query Frame = 1
BLAST of Cla020502 vs. TrEMBL
Match: A0A0A0KRE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G615270 PE=4 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 3.9e-38 Identity = 90/180 (50.00%), Postives = 110/180 (61.11%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 2.6e-13 Identity = 52/152 (34.21%), Postives = 79/152 (51.97%), Query Frame = 1
HSP 3 Score: 252.3 bits (643), Expect = 4.2e-64 Identity = 121/152 (79.61%), Postives = 128/152 (84.21%), Query Frame = 1
BLAST of Cla020502 vs. NCBI nr
Match: gi|475347360|gb|EMT00398.1| (hypothetical protein F775_07269 [Aegilops tauschii]) HSP 1 Score: 289.3 bits (739), Expect = 4.4e-75 Identity = 127/157 (80.89%), Postives = 142/157 (90.45%), Query Frame = 1
BLAST of Cla020502 vs. NCBI nr
Match: gi|475347360|gb|EMT00398.1| (hypothetical protein F775_07269 [Aegilops tauschii]) HSP 1 Score: 72.4 bits (176), Expect = 8.5e-10 Identity = 46/166 (27.71%), Postives = 80/166 (48.19%), Query Frame = 1
HSP 2 Score: 261.9 bits (668), Expect = 7.5e-67 Identity = 126/152 (82.89%), Postives = 129/152 (84.87%), Query Frame = 1
BLAST of Cla020502 vs. NCBI nr
Match: gi|778706379|ref|XP_011655839.1| (PREDICTED: host cell factor isoform X2 [Cucumis sativus]) HSP 1 Score: 166.0 bits (419), Expect = 5.6e-38 Identity = 90/180 (50.00%), Postives = 110/180 (61.11%), Query Frame = 1
HSP 2 Score: 261.9 bits (668), Expect = 7.5e-67 Identity = 126/152 (82.89%), Postives = 129/152 (84.87%), Query Frame = 1
BLAST of Cla020502 vs. NCBI nr
Match: gi|700197028|gb|KGN52205.1| (hypothetical protein Csa_5G615270 [Cucumis sativus]) HSP 1 Score: 166.0 bits (419), Expect = 5.6e-38 Identity = 90/180 (50.00%), Postives = 110/180 (61.11%), Query Frame = 1
HSP 2 Score: 83.6 bits (205), Expect = 3.7e-13 Identity = 52/152 (34.21%), Postives = 79/152 (51.97%), Query Frame = 1
HSP 3 Score: 261.9 bits (668), Expect = 7.5e-67 Identity = 126/152 (82.89%), Postives = 129/152 (84.87%), Query Frame = 1
BLAST of Cla020502 vs. NCBI nr
Match: gi|659091862|ref|XP_008446772.1| (PREDICTED: rab9 effector protein with kelch motifs isoform X1 [Cucumis melo]) HSP 1 Score: 166.0 bits (419), Expect = 5.6e-38 Identity = 90/180 (50.00%), Postives = 110/180 (61.11%), Query Frame = 1
HSP 2 Score: 83.2 bits (204), Expect = 4.8e-13 Identity = 52/152 (34.21%), Postives = 78/152 (51.32%), Query Frame = 1
HSP 3 Score: 261.9 bits (668), Expect = 7.5e-67 Identity = 126/152 (82.89%), Postives = 129/152 (84.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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