Cla020405 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla020405
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr5 : 30101684 .. 30102637 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATTCCTGTCATTAACAGGTTTAGCGGGTTGGAAACCGGGATGAGTTCCTTGCCAAATCCTACTCTCTTACCTCAGATTTTGGCTTCCCCCTCTGGATTCCAAACCCTTTCTCGATCTCTAGATCTCTGGAAATGGAGCGCTGTTATTATCGCCGTTGTTGCTACATTCAGCAGCGTAATCAACCGGATTAAGCTTTTGTTTGTCATTTTCCGACGCCAGAAACGTATTCTGCAGGAGATTGTTTATGATTCTGACTCCGATAGCGAATACTCTGTCGACGATTCTGCCAGCTCTGTTTCGTCGGTTTGGTCGGAGTTTGAAGAAGACGATGAGCCCGCCGCCTCGTCTTCTCGTAGTTGGGATTTCACTGACCGGGATTTTCATGTTAGAGGCTCCGATTACTACTTGAACGATGACGAAACGAAACGGACTCTGAGACATCGACGGAGCTTCCACAACCAAGACGGAGAAAGCGACCATTTTTCGTGGGCCGATTTCAGCGGAGGTAAAAGCGTTGTGAAATTATGGGACAATCTCAGATTCGAATTCGATCACTGTCACTCCGACGCGAATGAAATCCGCGTGTACGATGTAATCAAAGAGCAAACAATCGGGTCGATTCTAGCCGGGAAATCGCAGATAGCACCGTCGTTGACGTCGACGTTACTGTTATCAGCGGCGGAAAATGTTTCCGGGAAGACGTCGGTGAATCTCTGGGACACGCGCGTGGGTTCCCAAATCCCAGCGTTAATCGCCGAGTGGAAGCCGGTGACCGGAAAGGTTTTGGGTGTTAAATTTACCGGTGACCAAAAGGTGTATATTAGTGGAGACGCAGGAAAAATAACGGTCGGTGACGTGAGAAACGTGAAGTCGCCTCTAAAGAATTTAACGGCGGCGGATATGGAGACTTGGTTCGACGCCGACGCGGTTATGGTTTCGGCGGAATAG

mRNA sequence

ATGGAGATTCCTGTCATTAACAGGTTTAGCGGGTTGGAAACCGGGATGAGTTCCTTGCCAAATCCTACTCTCTTACCTCAGATTTTGGCTTCCCCCTCTGGATTCCAAACCCTTTCTCGATCTCTAGATCTCTGGAAATGGAGCGCTGTTATTATCGCCGTTGTTGCTACATTCAGCAGCGTAATCAACCGGATTAAGCTTTTGTTTGTCATTTTCCGACGCCAGAAACGTATTCTGCAGGAGATTGTTTATGATTCTGACTCCGATAGCGAATACTCTGTCGACGATTCTGCCAGCTCTGTTTCGTCGGTTTGGTCGGAGTTTGAAGAAGACGATGAGCCCGCCGCCTCGTCTTCTCGTAGTTGGGATTTCACTGACCGGGATTTTCATGTTAGAGGCTCCGATTACTACTTGAACGATGACGAAACGAAACGGACTCTGAGACATCGACGGAGCTTCCACAACCAAGACGGAGAAAGCGACCATTTTTCGTGGGCCGATTTCAGCGGAGGTAAAAGCGTTGTGAAATTATGGGACAATCTCAGATTCGAATTCGATCACTGTCACTCCGACGCGAATGAAATCCGCGTGTACGATGTAATCAAAGAGCAAACAATCGGGTCGATTCTAGCCGGGAAATCGCAGATAGCACCGTCGTTGACGTCGACGTTACTGTTATCAGCGGCGGAAAATGTTTCCGGGAAGACGTCGGTGAATCTCTGGGACACGCGCGTGGGTTCCCAAATCCCAGCGTTAATCGCCGAGTGGAAGCCGGTGACCGGAAAGGTTTTGGGTGTTAAATTTACCGGTGACCAAAAGGTGTATATTAGTGGAGACGCAGGAAAAATAACGGTCGGTGACGTGAGAAACGTGAAGTCGCCTCTAAAGAATTTAACGGCGGCGGATATGGAGACTTGGTTCGACGCCGACGCGGTTATGGTTTCGGCGGAATAG

Coding sequence (CDS)

ATGGAGATTCCTGTCATTAACAGGTTTAGCGGGTTGGAAACCGGGATGAGTTCCTTGCCAAATCCTACTCTCTTACCTCAGATTTTGGCTTCCCCCTCTGGATTCCAAACCCTTTCTCGATCTCTAGATCTCTGGAAATGGAGCGCTGTTATTATCGCCGTTGTTGCTACATTCAGCAGCGTAATCAACCGGATTAAGCTTTTGTTTGTCATTTTCCGACGCCAGAAACGTATTCTGCAGGAGATTGTTTATGATTCTGACTCCGATAGCGAATACTCTGTCGACGATTCTGCCAGCTCTGTTTCGTCGGTTTGGTCGGAGTTTGAAGAAGACGATGAGCCCGCCGCCTCGTCTTCTCGTAGTTGGGATTTCACTGACCGGGATTTTCATGTTAGAGGCTCCGATTACTACTTGAACGATGACGAAACGAAACGGACTCTGAGACATCGACGGAGCTTCCACAACCAAGACGGAGAAAGCGACCATTTTTCGTGGGCCGATTTCAGCGGAGGTAAAAGCGTTGTGAAATTATGGGACAATCTCAGATTCGAATTCGATCACTGTCACTCCGACGCGAATGAAATCCGCGTGTACGATGTAATCAAAGAGCAAACAATCGGGTCGATTCTAGCCGGGAAATCGCAGATAGCACCGTCGTTGACGTCGACGTTACTGTTATCAGCGGCGGAAAATGTTTCCGGGAAGACGTCGGTGAATCTCTGGGACACGCGCGTGGGTTCCCAAATCCCAGCGTTAATCGCCGAGTGGAAGCCGGTGACCGGAAAGGTTTTGGGTGTTAAATTTACCGGTGACCAAAAGGTGTATATTAGTGGAGACGCAGGAAAAATAACGGTCGGTGACGTGAGAAACGTGAAGTCGCCTCTAAAGAATTTAACGGCGGCGGATATGGAGACTTGGTTCGACGCCGACGCGGTTATGGTTTCGGCGGAATAG

Protein sequence

MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSSVINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEPAASSSRSWDFTDRDFHVRGSDYYLNDDETKRTLRHRRSFHNQDGESDHFSWADFSGGKSVVKLWDNLRFEFDHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTSTLLLSAAENVSGKTSVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYISGDAGKITVGDVRNVKSPLKNLTAADMETWFDADAVMVSAE

Homology

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BLAST of Cla020405 vs. TrEMBL
Match: A0A0A0KR50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609760 PE=4 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 2.3e-156
Identity = 283/322 (87.89%), Postives = 301/322 (93.48%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINRFSGLE+GMSSLPNPTLLPQIL SPSGFQTLSRSLDLWKWSAVIIAVVATFS 
Sbjct: 1   MEIPVINRFSGLESGMSSLPNPTLLPQILTSPSGFQTLSRSLDLWKWSAVIIAVVATFSG 60

Query: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDD--EPAASS 120
           VINRIKLLFVIFRRQKRILQEIVYDSDSD+EYSVDDSASSVSSVWSEFEEDD  EPA+SS
Sbjct: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDTEYSVDDSASSVSSVWSEFEEDDVDEPASSS 120

Query: 121 SRSWDFTDRDFHVRGSDYYLNDDETKRTLR--HRRSFHNQDGESDHFSWADFSGGKSVVK 180
           S SWD TD+DFHVRGSDYYLNDD+TK+TLR  HRRSFHNQDGE + FSWADF+GGKSVVK
Sbjct: 121 SFSWDLTDQDFHVRGSDYYLNDDKTKQTLRLRHRRSFHNQDGEGEQFSWADFTGGKSVVK 180

Query: 181 LWDNLRFEFDHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTSTLLLSAAENVSGKT 240
           LWDNLRFEFDHC SD NEIRV+DVIKEQTIGSILAGKSQIAPSLTSTLLLS   NVS KT
Sbjct: 181 LWDNLRFEFDHCDSDTNEIRVHDVIKEQTIGSILAGKSQIAPSLTSTLLLSTTTNVSSKT 240

Query: 241 SVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYISGDAG-KITVGDVRNVKSPL 300
           SVN+WDTR+G QIPALIAEWKPV GKVLGVKF+G+QKVY+  ++G KITVGDVRN+KSPL
Sbjct: 241 SVNIWDTRMGCQIPALIAEWKPVAGKVLGVKFSGEQKVYLRNESGEKITVGDVRNMKSPL 300

Query: 301 KNLTAADMETWFDADAVMVSAE 318
           +NLTAADMETWFDADAVMVSAE
Sbjct: 301 ENLTAADMETWFDADAVMVSAE 322

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BLAST of Cla020405 vs. TrEMBL
Match: A0A067JZL3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18342 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.2e-64
Identity = 150/333 (45.05%), Postives = 209/333 (62.76%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR   LETG++SL NP+ L QI AS SG + + ++   WKW A+I+A VA+FS+
Sbjct: 1   MEIPVINRIGNLETGIASLQNPSFLSQIFAS-SGVEKIHQAYSFWKWGALILAFVASFST 60

Query: 61  VINRIKLLFV------IFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEP 120
           +INRIK+L +      +      I  +  YD DSD+    D S SS+S    E EE+DEP
Sbjct: 61  IINRIKILVIRIQNHYLIPSSPPISTQEHYDFDSDT----DTSCSSMSD--DEEEEEDEP 120

Query: 121 ---AASSSRSWDFTDRDFHVRGSDYYLNDDETKRTLRHRRSFHNQDGESDHFSWADFSGG 180
              ++SSS+SW   D DF VRGS ++ ++    R+LR RR   N   E    SW++F+ G
Sbjct: 121 SLSSSSSSQSWRSIDEDFRVRGSGHHFDNQFQNRSLRRRR---NSSLEDLFSSWSEFTNG 180

Query: 181 KSVVKLWDNLRF--EFDHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTST----LL 240
           K+VVKLWDNL F    +  +   N + VYD+ KEQ + SI   K +I    TS+    ++
Sbjct: 181 KNVVKLWDNLGFGLGLNLENESTNCVSVYDMHKEQDVFSIFGEKCKIPAVCTSSSSPAVI 240

Query: 241 LSAAENVSGKTSVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYISGD-AGKIT 300
            S   N SG   + LWDTR+GS++PA++AEWKP  GK +GV   G++KVY+  D  G++T
Sbjct: 241 FSGESNTSGHL-LKLWDTRLGSRLPAILAEWKPRLGKFVGVSAAGNEKVYVRDDITGRLT 300

Query: 301 VGDVRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           VGD+R V SPL N T +D++TW+DADAV+V  +
Sbjct: 301 VGDIRKVSSPLANATDSDVDTWWDADAVIVEED 322

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BLAST of Cla020405 vs. TrEMBL
Match: A0A061E550_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_009683 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 1.8e-55
Identity = 143/331 (43.20%), Postives = 206/331 (62.24%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR S  E G++SL NP+ L Q+ A  SG + +  +   WKW A+I+A+VA+ S+
Sbjct: 1   MEIPVINRISDFEAGINSLNNPSFLSQVFAL-SGIEKIYEAYSFWKWGALILALVASLST 60

Query: 61  VINRIKLLFVIFRRQKRI-LQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEPAASSS 120
           +INR+K+L + FRR   +  Q +++D+D D++    D + S S    E+EE      S+S
Sbjct: 61  IINRLKILIIRFRRDHSLPSQPLLHDTDFDTD---TDCSCSSSEDEREYEEP-----STS 120

Query: 121 RSWDFTDRDFHVRGSDYYLNDDETKR--TLRHRRSFHNQDGESDHFSWAD-FSGGKSVVK 180
           +SW   D +F VRGS + ++D    R  TLR RRS        D FSWA+  + GKSVVK
Sbjct: 121 QSWRQVDENFRVRGSAHCIDDQWQNRKFTLRKRRS-----SIGDLFSWAEELTSGKSVVK 180

Query: 181 LWDNLRFEF--DHCHSDANEIRVYDVIKEQTIGSILAGK----SQIAPSLTSTLLLSA-A 240
           LWDNL   F  D   SD N + VYDV KE  + S   GK    +  APS +S +++SA A
Sbjct: 181 LWDNLGLGFGLDLDESD-NVLNVYDVNKETKLTSFFGGKCIFQAVSAPSSSSAVVVSAGA 240

Query: 241 ENVSGKTSVNLWDTRVGSQIPALIAEWKPVTG--KVLGVKFTGDQKVYISGDA-GKITVG 300
           ++   + +V+ WDTR+  +IP+++AEW+P     K+  V   G +KVYI  D  G++TV 
Sbjct: 241 DSSFRRVAVSAWDTRLPCRIPSILAEWRPKKSVEKIAAVNAGGVEKVYIRDDVTGELTVA 300

Query: 301 DVRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           D+R V SPLK+LT +D++TW+DA+AV+VS E
Sbjct: 301 DMRKVSSPLKSLTESDVDTWWDANAVIVSDE 316

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BLAST of Cla020405 vs. TrEMBL
Match: A0A0D2SJV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G192000 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.3e-54
Identity = 139/331 (41.99%), Postives = 202/331 (61.03%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR S  E  +S+L NP+ L Q+ A  SG   + ++   WKW A+I+A++A+ S+
Sbjct: 1   MEIPVINRISDFEASISTLNNPSFLSQVYAL-SGIDKIYQAYHFWKWGALILALLASLST 60

Query: 61  VINRIKLLFVIFRRQKRI-LQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEPAASSS 120
           +INR+K+L + FRR   +  + ++YD+D D+    D   SS SS  +E E ++    S+S
Sbjct: 61  IINRLKILVIRFRRNHSLPSRPLLYDTDFDT----DSETSSCSSSDNELEYEEP---SAS 120

Query: 121 RSWDFTDRDFHVRGSDYYLNDD--ETKRTLRHRRSFHNQDGESDHFSWAD-FSGGKSVVK 180
           ++W   D DF VRGS ++++D    +  TLR RRS        D FSWA+  + GKSVVK
Sbjct: 121 QNWRQVDEDFRVRGSGHFIDDQWRNSGSTLRKRRS-----SIGDLFSWAEELTNGKSVVK 180

Query: 181 LWDNLR--FEFDHCHSDANEIRVYDVIKEQTIGSILAGKSQI----APSLTSTLLLSAA- 240
           LWDNL   F  D   SD N + VYD+ KE  I SI   KS      A S +  +++SA  
Sbjct: 181 LWDNLGLGFRLDLDESD-NFLNVYDINKETKIRSIFGEKSDFQAVSASSSSPAVVVSAGG 240

Query: 241 ENVSGKTSVNLWDTRVGSQIPALIAEWKPVTG--KVLGVKFTGDQKVYISGDA-GKITVG 300
           ++ + + +V+ WDTR+  + P ++ EW P     K+  V   G +KVYI GD  G +TVG
Sbjct: 241 DSSTRRVAVSAWDTRLDCRQPVILTEWSPEKPMEKISAVNTDGVEKVYIRGDVKGMLTVG 300

Query: 301 DVRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           D+R  +SPL+NLT +++ETW+DADAV+VS E
Sbjct: 301 DMRKARSPLRNLTDSEVETWWDADAVIVSDE 317

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BLAST of Cla020405 vs. TrEMBL
Match: B9SLW5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1308620 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 9.0e-52
Identity = 133/333 (39.94%), Postives = 195/333 (58.56%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR    E   +SL NP+ L Q +   SG + + ++   WKW A+I+A+VA+FS+
Sbjct: 1   MEIPVINRIGDFE---ASLQNPSFLSQAITL-SGVEKIHQAYGFWKWGALILALVASFST 60

Query: 61  VINRIKLLFVIFRRQ-------KRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDE 120
           +INRIK L +  +           +  +  YDSD++SE S   S+     +  E +E+DE
Sbjct: 61  IINRIKNLIIRIQNHYLTPSPPPPLTTQQHYDSDTESETSSSSSSDDEQDIEVEDDEEDE 120

Query: 121 PAASSSRSWDFTDRDFHVRGSDYYLNDDETKRTLRHRRSFHNQDGESDHFSWADFSGGKS 180
               S RS D  D    V+GS +Y++D    R LR RR+   QD       +++F  GKS
Sbjct: 121 DERCSWRSNDDDDYYSVVKGSGHYIDDQWQNRNLRRRRNSSLQD------LFSEFRNGKS 180

Query: 181 VVKLWDNLRFEF--DHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTST----LLLS 240
           VVKLWDNL F F  +  ++  N + ++D+ KE ++ SIL  +S I    TS+    +++S
Sbjct: 181 VVKLWDNLGFGFGLNLDNNSRNCVSLHDINKELSLFSILGERSDIPAVSTSSSSPAVIVS 240

Query: 241 AAENVSGKTSVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQ--KVYISGDA-GKIT 300
           +  NV+G   + +WDTRVG +IP ++AEW+P  GK +G+   G    KVY+  D  G++T
Sbjct: 241 SEANVAGNL-LKVWDTRVGCRIPEILAEWRPRLGKFVGISSGGGGVGKVYVRDDVTGRLT 300

Query: 301 VGDVRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           VGD+R VKSPL N T  D++TW+DAD V V  E
Sbjct: 301 VGDMRKVKSPLVNATETDVDTWWDADGVSVGEE 322

[Close]

BLAST of Cla020405 vs. NCBI nr
Match: gi|659091551|ref|XP_008446606.1| (PREDICTED: uncharacterized protein LOC103489289 [Cucumis melo])

HSP 1 Score: 562.0 bits (1447), Expect = 6.6e-157
Identity = 286/322 (88.82%), Postives = 300/322 (93.17%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINRFSGLE+GMSSLPNPTLLPQIL SPSGFQT+SRSLDLWKWSAVIIAVVATFS 
Sbjct: 1   MEIPVINRFSGLESGMSSLPNPTLLPQILTSPSGFQTISRSLDLWKWSAVIIAVVATFSG 60

Query: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDD--EPAASS 120
           VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSA+SVSSVWSEFE+DD  EPA+SS
Sbjct: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSATSVSSVWSEFEDDDADEPASSS 120

Query: 121 SRSWDFTDRDFHVRGSDYYLNDDETKRTLR--HRRSFHNQDGESDHFSWADFSGGKSVVK 180
             SWD TDRDFHVRGSDYYLNDD+TKRTLR  HRRSFHNQDGE + FSWADF+GGKSVVK
Sbjct: 121 PFSWDLTDRDFHVRGSDYYLNDDKTKRTLRLRHRRSFHNQDGEDEQFSWADFTGGKSVVK 180

Query: 181 LWDNLRFEFDHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTSTLLLSAAENVSGKT 240
           LWDNLRFEFDH HSD NEIRV+DVIKEQTIGSI+AGKSQIAPSLTSTLLLS   NVS KT
Sbjct: 181 LWDNLRFEFDHYHSDTNEIRVHDVIKEQTIGSIVAGKSQIAPSLTSTLLLSTTTNVSSKT 240

Query: 241 SVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYI-SGDAGKITVGDVRNVKSPL 300
           SVN+WDTRVG QIPALIAEWKPV GKVLGVKF+ DQKVYI + DAGKITVGDVRNVKSPL
Sbjct: 241 SVNIWDTRVGCQIPALIAEWKPVAGKVLGVKFSNDQKVYIRNEDAGKITVGDVRNVKSPL 300

Query: 301 KNLTAADMETWFDADAVMVSAE 318
           +NLTAADMETWFDADAVMVSAE
Sbjct: 301 ENLTAADMETWFDADAVMVSAE 322

[Close]

BLAST of Cla020405 vs. NCBI nr
Match: gi|778706001|ref|XP_011655777.1| (PREDICTED: uncharacterized protein LOC105435585 [Cucumis sativus])

HSP 1 Score: 559.7 bits (1441), Expect = 3.3e-156
Identity = 283/322 (87.89%), Postives = 301/322 (93.48%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINRFSGLE+GMSSLPNPTLLPQIL SPSGFQTLSRSLDLWKWSAVIIAVVATFS 
Sbjct: 1   MEIPVINRFSGLESGMSSLPNPTLLPQILTSPSGFQTLSRSLDLWKWSAVIIAVVATFSG 60

Query: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDD--EPAASS 120
           VINRIKLLFVIFRRQKRILQEIVYDSDSD+EYSVDDSASSVSSVWSEFEEDD  EPA+SS
Sbjct: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDTEYSVDDSASSVSSVWSEFEEDDVDEPASSS 120

Query: 121 SRSWDFTDRDFHVRGSDYYLNDDETKRTLR--HRRSFHNQDGESDHFSWADFSGGKSVVK 180
           S SWD TD+DFHVRGSDYYLNDD+TK+TLR  HRRSFHNQDGE + FSWADF+GGKSVVK
Sbjct: 121 SFSWDLTDQDFHVRGSDYYLNDDKTKQTLRLRHRRSFHNQDGEGEQFSWADFTGGKSVVK 180

Query: 181 LWDNLRFEFDHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTSTLLLSAAENVSGKT 240
           LWDNLRFEFDHC SD NEIRV+DVIKEQTIGSILAGKSQIAPSLTSTLLLS   NVS KT
Sbjct: 181 LWDNLRFEFDHCDSDTNEIRVHDVIKEQTIGSILAGKSQIAPSLTSTLLLSTTTNVSSKT 240

Query: 241 SVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYISGDAG-KITVGDVRNVKSPL 300
           SVN+WDTR+G QIPALIAEWKPV GKVLGVKF+G+QKVY+  ++G KITVGDVRN+KSPL
Sbjct: 241 SVNIWDTRMGCQIPALIAEWKPVAGKVLGVKFSGEQKVYLRNESGEKITVGDVRNMKSPL 300

Query: 301 KNLTAADMETWFDADAVMVSAE 318
           +NLTAADMETWFDADAVMVSAE
Sbjct: 301 ENLTAADMETWFDADAVMVSAE 322

[Close]

BLAST of Cla020405 vs. NCBI nr
Match: gi|802681373|ref|XP_012082103.1| (PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas])

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 150/333 (45.05%), Postives = 209/333 (62.76%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR   LETG++SL NP+ L QI AS SG + + ++   WKW A+I+A VA+FS+
Sbjct: 1   MEIPVINRIGNLETGIASLQNPSFLSQIFAS-SGVEKIHQAYSFWKWGALILAFVASFST 60

Query: 61  VINRIKLLFV------IFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEP 120
           +INRIK+L +      +      I  +  YD DSD+    D S SS+S    E EE+DEP
Sbjct: 61  IINRIKILVIRIQNHYLIPSSPPISTQEHYDFDSDT----DTSCSSMSD--DEEEEEDEP 120

Query: 121 ---AASSSRSWDFTDRDFHVRGSDYYLNDDETKRTLRHRRSFHNQDGESDHFSWADFSGG 180
              ++SSS+SW   D DF VRGS ++ ++    R+LR RR   N   E    SW++F+ G
Sbjct: 121 SLSSSSSSQSWRSIDEDFRVRGSGHHFDNQFQNRSLRRRR---NSSLEDLFSSWSEFTNG 180

Query: 181 KSVVKLWDNLRF--EFDHCHSDANEIRVYDVIKEQTIGSILAGKSQIAPSLTST----LL 240
           K+VVKLWDNL F    +  +   N + VYD+ KEQ + SI   K +I    TS+    ++
Sbjct: 181 KNVVKLWDNLGFGLGLNLENESTNCVSVYDMHKEQDVFSIFGEKCKIPAVCTSSSSPAVI 240

Query: 241 LSAAENVSGKTSVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYISGD-AGKIT 300
            S   N SG   + LWDTR+GS++PA++AEWKP  GK +GV   G++KVY+  D  G++T
Sbjct: 241 FSGESNTSGHL-LKLWDTRLGSRLPAILAEWKPRLGKFVGVSAAGNEKVYVRDDITGRLT 300

Query: 301 VGDVRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           VGD+R V SPL N T +D++TW+DADAV+V  +
Sbjct: 301 VGDIRKVSSPLANATDSDVDTWWDADAVIVEED 322

[Close]

BLAST of Cla020405 vs. NCBI nr
Match: gi|743784379|ref|XP_011022249.1| (PREDICTED: uncharacterized protein LOC105124081 [Populus euphratica])

HSP 1 Score: 234.6 bits (597), Expect = 2.4e-58
Identity = 137/330 (41.52%), Postives = 200/330 (60.61%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR S  ETG++SL NPT L QILA  SG + + ++   WKW A+I+A+ A+F++
Sbjct: 1   MEIPVINRISDFETGLTSLQNPTFLSQILAL-SGVEKIHQAYSFWKWGALILALAASFTT 60

Query: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEPAASSSR 120
           +INRIK+L + F+    I    +  +  D +Y  +   S  SS+    +E +E + SSSR
Sbjct: 61  IINRIKILIIRFKNHPFISSPSLIINQEDCDYESETDLSCPSSISLSDDEQEEESTSSSR 120

Query: 121 SW---DFTDRDFHVRGS-DYYLNDDETKRTLRHRRSFHNQDGESDHFSWADFSGGKSVVK 180
           SW   +  D+DF VRGS + Y++D       R RR  ++  G  D FS  DF+ GK+VVK
Sbjct: 121 SWWSINDHDQDFRVRGSGNCYIDDQCQGSNFRLRRRRNSSIG--DFFSLTDFTNGKNVVK 180

Query: 181 LWDN----LRFEFDHCHSDAN-EIRVYDVIKEQTIGSILAGKSQ---IAPSLTSTLLLSA 240
           LWDN    L    ++ +   N  +  YD+ KEQ I SI   K      A   + ++++S 
Sbjct: 181 LWDNLGLSLGLNLNNSYDSRNAAVSFYDINKEQKICSIFGSKCDSIFAAVPTSPSVVVSG 240

Query: 241 AENVSGKTSVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGDQKVYISGD-AGKITVGD 300
             N+SG +S++LWD RVG ++P + AE +P  GK++GV   G +KVY+  D  G++TVGD
Sbjct: 241 ETNLSGHSSLSLWDARVGFRVPEVFAELRPTLGKIVGVAGGGVEKVYVRDDVTGELTVGD 300

Query: 301 VRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           +R   SPL N T +D++TW+DADAV+V  E
Sbjct: 301 MRKPSSPLVNATESDVDTWWDADAVIVDNE 327

[Close]

BLAST of Cla020405 vs. NCBI nr
Match: gi|743797329|ref|XP_011007781.1| (PREDICTED: uncharacterized protein LOC105113331 [Populus euphratica])

HSP 1 Score: 227.3 bits (578), Expect = 3.9e-56
Identity = 136/332 (40.96%), Postives = 203/332 (61.14%), Query Frame = 1


Query: 1   MEIPVINRFSGLETGMSSLPNPTLLPQILASPSGFQTLSRSLDLWKWSAVIIAVVATFSS 60
           MEIPVINR S  ETG+SSL NP+ L QI A  SG + +  +   WKW A+++A+VA+F++
Sbjct: 1   MEIPVINRISDFETGISSLQNPSFLSQIFAL-SGVEKIHHAYGFWKWGALLLALVASFTT 60

Query: 61  VINRIKLLFVIFRRQKRILQEIVYDSDSDSEYSVDDSASSVSSVWSEFEEDDEPAASSSR 120
           +INRIK+L + F+    I    +  +  D +Y  +   S  SS+    EE +E   S+SR
Sbjct: 61  IINRIKILVIRFKNHPFISSPSLITNQEDGDYESETDLSCSSSISLSDEEQEEEPPSTSR 120

Query: 121 SW---DFTDRDFHVRGS-DYYLNDDETKRTLRHRRSFHNQDGESDHFSWADFSGGKSVVK 180
           SW   +  D DF VRGS + Y++D       R RR  ++  G  D FS +DF+  ++VVK
Sbjct: 121 SWWSINDHDEDFCVRGSGNRYIDDQWQNGNFRLRRRRNSSIG--DFFSSSDFTNERNVVK 180

Query: 181 LWDNLRFEFDHCHSDANEIR-----VYDVIKEQTIGSILAGK--SQIAPSLTSTLLLSAA 240
           LWDNL        ++ ++ R      YD+ +E+ I SI   K  S  A S + ++++SA 
Sbjct: 181 LWDNLGLGLGFNLNNGSDSRSAVVSFYDINQERNICSIFGSKCDSFTAVSSSPSVVVSAE 240

Query: 241 ENVSGKTSVNLWDTRVGSQIPALIAEWKPVTGKVLGVKFTGD---QKVYISGD-AGKITV 300
            N+SG +S+NLWD+RVG ++P + AE +P+ GK++ V   G     +VY+ GD  G++TV
Sbjct: 241 TNLSGHSSLNLWDSRVGFRMPQVFAELRPMLGKIVDVSGGGGGGVTEVYVRGDVTGELTV 300

Query: 301 GDVRNVKSPLKNLTAADMETWFDADAVMVSAE 318
           GD+R V SPL N+T +D++TW+DADAV+V  E
Sbjct: 301 GDIRKVSSPLVNVTESDVDTWWDADAVIVEDE 329

The following BLAST results are available for this feature:

BLAST of Cla020405 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR50_CUCSA	2.3e-156	87.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G609760 PE=4 SV=1	[more]
A0A067JZL3_JATCU	1.2e-64	45.05	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18342 PE=4 SV=1	[more]
A0A061E550_THECC	1.8e-55	43.20	Uncharacterized protein OS=Theobroma cacao GN=TCM_009683 PE=4 SV=1	[more]
A0A0D2SJV6_GOSRA	3.3e-54	41.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G192000 PE=4 SV=1	[more]
B9SLW5_RICCO	9.0e-52	39.94	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1308620 PE=4 SV=1	[more]

BLAST of Cla020405 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091551\|ref\|XP_008446606.1\|	6.6e-157	88.82	PREDICTED: uncharacterized protein LOC103489289 [Cucumis melo]	[more]
gi\|778706001\|ref\|XP_011655777.1\|	3.3e-156	87.89	PREDICTED: uncharacterized protein LOC105435585 [Cucumis sativus]	[more]
gi\|802681373\|ref\|XP_012082103.1\|	1.7e-64	45.05	PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]	[more]
gi\|743784379\|ref\|XP_011022249.1\|	2.4e-58	41.52	PREDICTED: uncharacterized protein LOC105124081 [Populus euphratica]	[more]
gi\|743797329\|ref\|XP_011007781.1\|	3.9e-56	40.96	PREDICTED: uncharacterized protein LOC105113331 [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR017986	WD40_repeat_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU05185	watermelon unigene v2 vs TrEMBL	transcribed_cluster
WMU51915	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla020405	Cla020405.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU51915	WMU51915	transcribed_cluster
WMU05185	WMU05185	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 168..299 score: 2.
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 190..295 score: 4.
None	No IPR available	PANTHER	PTHR36715	FAMILY NOT NAMED	coord: 2..317 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla020405	Cla97C05G104450	Watermelon (97103) v2	wmwmbB207
Cla020405	Csa5G609760	Cucumber (Chinese Long) v2	cuwmB401
Cla020405	MELO3C012256	Melon (DHL92) v3.5.1	mewmB061
Cla020405	ClCG05G022630	Watermelon (Charleston Gray)	wcgwmB285
Cla020405	CSPI05G25360	Wild cucumber (PI 183967)	cpiwmB410
Cla020405	Cucsa.283490	Cucumber (Gy14) v1	cgywmB524
Cla020405	CmaCh04G020640	Cucurbita maxima (Rimu)	cmawmB709
Cla020405	CmaCh04G015010	Cucurbita maxima (Rimu)	cmawmB699
Cla020405	CmoCh04G015720	Cucurbita moschata (Rifu)	cmowmB693
Cla020405	CmoCh18G010220	Cucurbita moschata (Rifu)	cmowmB365
Cla020405	CmoCh15G009530	Cucurbita moschata (Rifu)	cmowmB259
Cla020405	CmoCh04G021610	Cucurbita moschata (Rifu)	cmowmB705
Cla020405	Lsi04G002440	Bottle gourd (USVL1VR-Ls)	lsiwmB312
Cla020405	Cp4.1LG09g03070	Cucurbita pepo (Zucchini)	cpewmB031
Cla020405	Cp4.1LG13g06790	Cucurbita pepo (Zucchini)	cpewmB178
Cla020405	Cp4.1LG01g13680	Cucurbita pepo (Zucchini)	cpewmB427
Cla020405	Cp4.1LG01g18030	Cucurbita pepo (Zucchini)	cpewmB429
Cla020405	MELO3C012256.2	Melon (DHL92) v3.6.1	medwmB061
Cla020405	Carg01846	Silver-seed gourd	carwmB0842
Cla020405	Carg19061	Silver-seed gourd	carwmB1050
Cla020405	CsaV3_5G034410	Cucumber (Chinese Long) v3	cucwmB428
Cla020405	Bhi07G001094	Wax gourd	wgowmB550

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla020405	Bottle gourd (USVL1VR-Ls)	lsiwmB402
Cla020405	Cucumber (Gy14) v2	cgybwmB038
Cla020405	Cucumber (Gy14) v2	cgybwmB377
Cla020405	Melon (DHL92) v3.6.1	medwmB266
Cla020405	Silver-seed gourd	carwmB0591
Cla020405	Cucumber (Chinese Long) v3	cucwmB043
Cla020405	Cucumber (Chinese Long) v3	cucwmB045
Cla020405	Watermelon (97103) v2	wmwmbB205
Cla020405	Watermelon (97103) v2	wmwmbB213
Cla020405	Wax gourd	wgowmB210
Cla020405	Watermelon (97103) v1	wmwmB130
Cla020405	Watermelon (97103) v1	wmwmB136
Cla020405	Cucurbita maxima (Rimu)	cmawmB112
Cla020405	Cucurbita maxima (Rimu)	cmawmB270
Cla020405	Cucurbita maxima (Rimu)	cmawmB372
Cla020405	Melon (DHL92) v3.5.1	mewmB154
Cla020405	Melon (DHL92) v3.5.1	mewmB275
Cla020405	Watermelon (Charleston Gray)	wcgwmB326
Cla020405	Cucumber (Chinese Long) v2	cuwmB039
Cla020405	Cucumber (Chinese Long) v2	cuwmB040
Cla020405	Cucurbita pepo (Zucchini)	cpewmB439
Cla020405	Cucurbita pepo (Zucchini)	cpewmB653