Cla020382 (gene) Watermelon (97103) v1

NameCla020382
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr5 : 30310604 .. 30310819 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGTCAGAGTTGGTGCAGTGACTGTGGTTGGAGGTTGTTGGAGTTGGCCATCAACAATGGTGATTGGATGTTGTTGGAGTTGGCTGCAGGCGGTGGTTGTCGAAGGCGGTTGCTGGAGTTTGGTCGTCAAAGGCGGTTGTCGAATGCAGGTGGTGGTTTTCGGAGGTGGTTGTCGGAGTTTGGGTGTCAGTGTGGTCACTGGAGTTGAGTAA

mRNA sequence

ATGGTCGTCAGAGTTGGTGCAGTGACTGTGGTTGGAGGTTGTTGGAGTTGGCCATCAACAATGGTGATTGGATGTTGTTGGAGTTGGCTGCAGGCGGTGGTTGTCGAAGGCGGTTGCTGGAGTTTGGTCGTCAAAGGCGGTTGTCGAATGCAGGTGGTGGTTTTCGGAGGTGGTTGTCGGAGTTTGGGTGTCAGTGTGGTCACTGGAGTTGAGTAA

Coding sequence (CDS)

ATGGTCGTCAGAGTTGGTGCAGTGACTGTGGTTGGAGGTTGTTGGAGTTGGCCATCAACAATGGTGATTGGATGTTGTTGGAGTTGGCTGCAGGCGGTGGTTGTCGAAGGCGGTTGCTGGAGTTTGGTCGTCAAAGGCGGTTGTCGAATGCAGGTGGTGGTTTTCGGAGGTGGTTGTCGGAGTTTGGGTGTCAGTGTGGTCACTGGAGTTGAGTAA

Protein sequence

MVVRVGAVTVVGGCWSWPSTMVIGCCWSWLQAVVVEGGCWSLVVKGGCRMQVVVFGGGCRSLGVSVVTGVE
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla020382Cla020382.1mRNA


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..25
score:

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla020382Melon (DHL92) v3.6.1medwmB061
Cla020382Melon (DHL92) v3.6.1medwmB266
Cla020382Melon (DHL92) v3.6.1medwmB316
Cla020382Silver-seed gourdcarwmB0591
Cla020382Silver-seed gourdcarwmB0841
Cla020382Silver-seed gourdcarwmB0842
Cla020382Silver-seed gourdcarwmB1044
Cla020382Cucumber (Chinese Long) v3cucwmB043
Cla020382Cucumber (Chinese Long) v3cucwmB045
Cla020382Cucumber (Chinese Long) v3cucwmB428
Cla020382Cucumber (Chinese Long) v3cucwmB525
Cla020382Watermelon (97103) v2wmwmbB205
Cla020382Watermelon (97103) v2wmwmbB207
Cla020382Watermelon (97103) v2wmwmbB213
Cla020382Watermelon (97103) v2wmwmbB228
Cla020382Wax gourdwgowmB210
Cla020382Wax gourdwgowmB550
Cla020382Watermelon (97103) v1wmwmB064
Cla020382Watermelon (97103) v1wmwmB124
Cla020382Watermelon (97103) v1wmwmB130
Cla020382Watermelon (97103) v1wmwmB136
Cla020382Cucumber (Gy14) v1cgywmB383
Cla020382Cucumber (Gy14) v1cgywmB524
Cla020382Cucurbita maxima (Rimu)cmawmB112
Cla020382Cucurbita maxima (Rimu)cmawmB372
Cla020382Cucurbita maxima (Rimu)cmawmB699
Cla020382Cucurbita maxima (Rimu)cmawmB701
Cla020382Cucurbita maxima (Rimu)cmawmB706
Cla020382Cucurbita moschata (Rifu)cmowmB365
Cla020382Cucurbita moschata (Rifu)cmowmB693
Cla020382Cucurbita moschata (Rifu)cmowmB695
Cla020382Cucurbita moschata (Rifu)cmowmB703
Cla020382Melon (DHL92) v3.5.1mewmB061
Cla020382Melon (DHL92) v3.5.1mewmB154
Cla020382Melon (DHL92) v3.5.1mewmB275
Cla020382Watermelon (Charleston Gray)wcgwmB285
Cla020382Watermelon (Charleston Gray)wcgwmB326
Cla020382Watermelon (Charleston Gray)wcgwmB417
Cla020382Cucumber (Chinese Long) v2cuwmB039
Cla020382Cucumber (Chinese Long) v2cuwmB040
Cla020382Cucumber (Chinese Long) v2cuwmB401
Cla020382Cucurbita pepo (Zucchini)cpewmB031
Cla020382Cucurbita pepo (Zucchini)cpewmB427
Cla020382Cucurbita pepo (Zucchini)cpewmB430
Cla020382Cucurbita pepo (Zucchini)cpewmB436
Cla020382Cucurbita pepo (Zucchini)cpewmB439
Cla020382Cucurbita pepo (Zucchini)cpewmB653
Cla020382Bottle gourd (USVL1VR-Ls)lsiwmB312
Cla020382Bottle gourd (USVL1VR-Ls)lsiwmB402
Cla020382Cucumber (Gy14) v2cgybwmB038
Cla020382Cucumber (Gy14) v2cgybwmB377