Cla020013 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGACAACTTGATGGATAAAGTTAATGCCTTGGGTGAACGCTTAAAGATTAGTGGGACAGAGATGAGCCGAAAGATGAGTGCAGGTGTCAGCTCTATGAGTTTTAAAATGAAGGAACTCTTTCAAGGTCCAAACCAGGGTGATAAGCTTGCTGAGGATGCCACATCAGAGACTCTGGAAGAGCCGGATTGGGCCCTGAATCTTGAAATATGTGACATGGTTAATTCTGAGAAAATCAACAGCATTGACTTGATTCGCGGGGTTAAAAAACGTTTAATGTTGAAAAATCCCAGGATCCAGTATTTGGCATTGGTGCTGCTTGAGACATGTGTTAAAAATTGTGAGAAGTCTTTCTCCGAGGTGGCAGCTGAGAGAGTTCTTGATGAGATGGTGAAGTTAATTGATGATCCACAAACTGTTGTTAATAATCGGAACAAGGCTTTAATGTTGATTGAAGCATGGGGAGAATCAACTAGCGAGCTTCGATATTTGCCTGTTTACGAAGAAACATACAAGGTATCCGTATATTTCTTTTATTTCTTGTTTCTTGTTATTTATTATTTTTTCTTTTTGAGTACTAGTATCCATATATTTCTGTACAGGTATCCATATATTTGTTTTCTAAATATCTGGAATTTGATTATGAAAAAGATTTAGGGCTTTAGCATAATCTCAGCGGATTAAGTTTAGAAGGATGCTTTTTTTTTCCTCCCTCTTTCTTTCTTCTTAAAAGGAATCTTTCATCTGCTGGTATTTCCACTTTCTAAGTTTACACATAGAATGATAGATACTATGCATATAGTGAGTATCTTAAATATTGTTTTTAAGAAGTTTATGTCAAATTATAGTAACTTGGCAACAAACTATGTTTAATGCTTGGATAGATGAAGTGTGGCATGTGGGACAAGCTTACCTTGGGAAGAAAAGCTTGATTTAATTGAAAGGGAAGTAACTTCTTGGTGTGTTCTTTCCAAATGCTTTTGTAATTACTCTGCTATGTATATGTTTATTGGAGTTCCTTTAAATATATTTCAGATTGAGTTGGTTGGGAGGGTTTTAGCGTTGGTATCGAGGTTGGTTTGATTTTGTTTTTCGGGTACAGATGGAGTATAGTGGACATTAGAAAAGGCTCCAGTATGTTCTTAACTAATTATATAGAAAGCTTGCGGACTGTTTATGAAGCAACAAAAATTAAACCAATTGGGATGAGAAACTGAGAAATGTATTGACACAATAAAACCTTTGTAACAATTGTAAATGATCAGTGTCTCTAACCTCGTACTCCACTTTGGAGTTCCGGTCCCTAAAACAACATTATTTTGAACATGAACTGGTCAAATAACTTTATTCCAAAGACTGGATTTTCGTTCCAAAAGAAGGTTTAAAAGTTATCAATTTTTTATTTTATTTTATTTCTAATTTCCTTATCCCCTTGAATGGATGGACATGCAACCACTTCTCTGAAGTGTAGAAATACAGGGTATTTGTTGTATATTTCTTCATCTTAATGGACATGGAATTGGTTTTACTGACTGCACAATAGGATGTACTTCATACTTAAAGTTGTACTTGTGGAGTGGTTTGGCTGACTGCACAAATAGGAAATGCTAGTACTTCGTACATAAAATTGTACATGTGGAAGCGGTAGGAGAAGAAATATATATGGAAGGGAACTACTACTTATCCATAAAATTTTCATGACATGTGATGTGTTCTTTCCCTTCCTTCGTCCCTTATATAAAGGTGATAATACGAATTGTGTAGTCAAGTGTGCAAATAGGGAGACAATGTTGTAATCCTCTCTAGGAAATGAAATGGATCTTTTGCCCCAAAGAATGTGTGCTTATGTTGTTCTTCACAAAGGTATTCTAACCTCTCTTGCTTCCTTTCCAACTCTGTGGATGGGAAGGCTGAACAGGATGGAGGTCTTAGGCTGTATGGAGTGAAAAGAAAAAAAAGAAAAACTGTGGTGGGATTTCTAACCCCACGACTTAATACATCATCAAAGACAAAACCTTAACCAAGGATGAAAGGTCCACTCCCTTGTTCAAGTGGTGGCAATCCACATCATTCTCCTTTTCTTTAGAAAAATCCCCCTCCCAGGTAGACCAAGGTGACTTCTTGAACGTGTGGCCTTCCTCTTTGATACCCAATACCAATTGAAGTGGGATGTATCAACCTAATCTCCTAAAAGGGAGGAAGTTCTATCTATTCCTGTATATCACCTAGGACAAAATGCAGGAGCGTACGTCCGAAATGTACTCCCATCCCTTTTGAGACATCCCATTTCTTTCAAAGAAAACGAAGCTTTCCACTGACATTGTTGTGCAAATTTAAAAGCATCAATATCTCATTGGTAGAAATATCCACCTATATATTAAATGAGATAACCCTTAGGTCCTAAAATTTCGTCATATATGAAAGTGCTTTAAGGCAATCAAGTCTCAAGTCTTTTACAATACGAGAAGATTGGCAGTTTGGAAATTTTCATTTATTGGGGGTTGTATTAAGGATTAGTCTCCTTTATCCTTCATTTTGTTCTTGTTGCTCCATTTTCTATGTTGTTTTTCCTCTTTTCTTTGTCTGCTTCATTGTACTTTGAGCTTTAGACTCGCTTCATTAATTCAATGAAAAAGTCTTGTTTCTGTTAAAGAAAAATATGGGAGTTGATATCATTCTCAAATCTTTAATGCCCCTAATATGGGAAACACAATTTTTCTCAATTCCTTCCATCCAAGGAAAGTTGGAGATTAACAATTTGGGACTTTATTTAGCTAGTTTTTCTTTTAGATGCTTTTCCTGTGGGCTGAGGTGCAGAAAATTGATTTATAATTACTTTTTCTTCTGTTTGTATCTGTCAGAGTTTAAAATCAAGAGGCATTCGGTTCCCTGGTCGGGACAATGAGAGTCTTGCACCCATTTTCACCCCTGCTCGTACAGTATCAGCTTCGGAGACAGAAGCCAGTTATGTTGAACAGTTTCATCATGACATTCCCGTGCAAACCTTTACAGCTGAAGAAACTAAGGAAGCATTTGACGTTGCAAGGAACAGCATTGAGCTTCTTTCCACAGTGTTATCCTCATCACCCCCTCAGGATACTTCGGAGGTAATGCATCTCTTTCATAGTGTTCTGATTTCTCTCTCTCACACTCAATATGTATATGCCTTTTAATTTTTTATATGTGATACAAAATTACAAATGGATGCTTCGAACTGTTCATGATCTGGCACTATTTAAAAACTTGGTCAACTACTGCAGGCTGCAGCTGATCTGAAACACGAACTCTTTTCTATGTCAAATATCCTAATAAGATTTACTAAAGATACATGTAAGAAATAGAGTACAAAAACACCTCCTGTTAATTGTCCTTGCCCCTAGGTTGAAGTTTAAAATCTTTTCTTTACTCCCATATATAAAAAGCATCATCACCAATTCCGCTTCCCTTCTTTCCTCCTGAAATTTGAACTTCGCAACGCCTCAACTTTTATTGAGGCTCGTGGTTATGAAGAGATTGGTTGCAAGTGTTTGGAAATTGATGTTGGTAAGAACCATGACACTAGACTATTTTAATATCACGTTTATTTTCTTATTTTTTGACGAGAAATATTAGAATAAATTGGTGAAAAAAAGAATAAGAACAACCTAAGGTGATGGCAGGGGGTTGAGGGTACCTACCCCCTCCCAAACATAGATTGCAACTCGACAATCCCACATTGAGAATCATCACGAAAACTTGGTGTTGGAGAATATTCACTTCTAGGTTCTTTTTTGCAATAAATTTTATTAAATGGTCTCAAGGGTAGAGATTATACTTGGACTCCCTATTTTTGCTGTATGCTTAAATTTCCCATAAAGAGAGTGCCTGTGATCCGTGGGATTCTCCTCCCTGTTGCTGAAGGTATGTTTTTTTCTTTTAAACTTCGTGAGCTGGAGATATCGGTAGATGTTCAAGTTGATTATTTTTTCAATTCGATCACGAACAATGTAATGATCCTACCTTGTTTCTCTCCCTCTGCAGGATGATCTGACTAGCACACTAGTACTACAATGTCGTCAGTCGCAATTAACCATCCAAAGGATCATCGAGACTGCTGGAGACAATGAGGCCCTACTTTTCGAGGCATTGAATGTGAACGATGAGATTCAGAAAGTCCTTACCAAGTATCAAGATCTGAAGAAGCCTTCAGCTGTTCCGCGTGAACCAGAACCAGCGATGATACCTGTTGCTGTTGAACCTGATGAATCTCCTCGTCATGCCAAGGAAGACGCTCTGGTTAGAAAACCAGCTACTTCTCGCGGTCGATCGCTTGGCGGAAGTAGCGATGACATGATGGATGATCTCGATGAGATGATATTTGGCAAGAAAGGTGGAAGTGGATCTGATCGGGGAAACGAATCGAAGAAGCCTGATTCCTCAAAAGACAATGATCTGATTTCCTTTTGA ATGAGTGACAACTTGATGGATAAAGTTAATGCCTTGGGTGAACGCTTAAAGATTAGTGGGACAGAGATGAGCCGAAAGATGAGTGCAGGTGTCAGCTCTATGAGTTTTAAAATGAAGGAACTCTTTCAAGGTCCAAACCAGGGTGATAAGCTTGCTGAGGATGCCACATCAGAGACTCTGGAAGAGCCGGATTGGGCCCTGAATCTTGAAATATGTGACATGGTTAATTCTGAGAAAATCAACAGCATTGACTTGATTCGCGGGGTTAAAAAACGTTTAATGTTGAAAAATCCCAGGATCCAGTATTTGGCATTGGTGCTGCTTGAGACATGTGTTAAAAATTGTGAGAAGTCTTTCTCCGAGGTGGCAGCTGAGAGAGTTCTTGATGAGATGGTGAAGTTAATTGATGATCCACAAACTGTTGTTAATAATCGGAACAAGGCTTTAATGTTGATTGAAGCATGGGGAGAATCAACTAGCGAGCTTCGATATTTGCCTGTTTACGAAGAAACATACAAGAGTTTAAAATCAAGAGGCATTCGGTTCCCTGGTCGGGACAATGAGAGTCTTGCACCCATTTTCACCCCTGCTCGTACAGTATCAGCTTCGGAGACAGAAGCCAGTTATGTTGAACAGTTTCATCATGACATTCCCGTGCAAACCTTTACAGCTGAAGAAACTAAGGAAGCATTTGACGTTGCAAGGAACAGCATTGAGCTTCTTTCCACAGTGTTATCCTCATCACCCCCTCAGGATACTTCGGAGGATGATCTGACTAGCACACTAGTACTACAATGTCGTCAGTCGCAATTAACCATCCAAAGGATCATCGAGACTGCTGGAGACAATGAGGCCCTACTTTTCGAGGCATTGAATGTGAACGATGAGATTCAGAAAGTCCTTACCAAGTATCAAGATCTGAAGAAGCCTTCAGCTGTTCCGCGTGAACCAGAACCAGCGATGATACCTGTTGCTGTTGAACCTGATGAATCTCCTCGTCATGCCAAGGAAGACGCTCTGGTTAGAAAACCAGCTACTTCTCGCGGTCGATCGCTTGGCGGAAGTAGCGATGACATGATGGATGATCTCGATGAGATGATATTTGGCAAGAAAGGTGGAAGTGGATCTGATCGGGGAAACGAATCGAAGAAGCCTGATTCCTCAAAAGACAATGATCTGATTTCCTTTTGA ATGAGTGACAACTTGATGGATAAAGTTAATGCCTTGGGTGAACGCTTAAAGATTAGTGGGACAGAGATGAGCCGAAAGATGAGTGCAGGTGTCAGCTCTATGAGTTTTAAAATGAAGGAACTCTTTCAAGGTCCAAACCAGGGTGATAAGCTTGCTGAGGATGCCACATCAGAGACTCTGGAAGAGCCGGATTGGGCCCTGAATCTTGAAATATGTGACATGGTTAATTCTGAGAAAATCAACAGCATTGACTTGATTCGCGGGGTTAAAAAACGTTTAATGTTGAAAAATCCCAGGATCCAGTATTTGGCATTGGTGCTGCTTGAGACATGTGTTAAAAATTGTGAGAAGTCTTTCTCCGAGGTGGCAGCTGAGAGAGTTCTTGATGAGATGGTGAAGTTAATTGATGATCCACAAACTGTTGTTAATAATCGGAACAAGGCTTTAATGTTGATTGAAGCATGGGGAGAATCAACTAGCGAGCTTCGATATTTGCCTGTTTACGAAGAAACATACAAGAGTTTAAAATCAAGAGGCATTCGGTTCCCTGGTCGGGACAATGAGAGTCTTGCACCCATTTTCACCCCTGCTCGTACAGTATCAGCTTCGGAGACAGAAGCCAGTTATGTTGAACAGTTTCATCATGACATTCCCGTGCAAACCTTTACAGCTGAAGAAACTAAGGAAGCATTTGACGTTGCAAGGAACAGCATTGAGCTTCTTTCCACAGTGTTATCCTCATCACCCCCTCAGGATACTTCGGAGGATGATCTGACTAGCACACTAGTACTACAATGTCGTCAGTCGCAATTAACCATCCAAAGGATCATCGAGACTGCTGGAGACAATGAGGCCCTACTTTTCGAGGCATTGAATGTGAACGATGAGATTCAGAAAGTCCTTACCAAGTATCAAGATCTGAAGAAGCCTTCAGCTGTTCCGCGTGAACCAGAACCAGCGATGATACCTGTTGCTGTTGAACCTGATGAATCTCCTCGTCATGCCAAGGAAGACGCTCTGGTTAGAAAACCAGCTACTTCTCGCGGTCGATCGCTTGGCGGAAGTAGCGATGACATGATGGATGATCTCGATGAGATGATATTTGGCAAGAAAGGTGGAAGTGGATCTGATCGGGGAAACGAATCGAAGAAGCCTGATTCCTCAAAAGACAATGATCTGATTTCCTTTTGA MSDNLMDKVNALGERLKISGTEMSRKMSAGVSSMSFKMKELFQGPNQGDKLAEDATSETLEEPDWALNLEICDMVNSEKINSIDLIRGVKKRLMLKNPRIQYLALVLLETCVKNCEKSFSEVAAERVLDEMVKLIDDPQTVVNNRNKALMLIEAWGESTSELRYLPVYEETYKSLKSRGIRFPGRDNESLAPIFTPARTVSASETEASYVEQFHHDIPVQTFTAEETKEAFDVARNSIELLSTVLSSSPPQDTSEDDLTSTLVLQCRQSQLTIQRIIETAGDNEALLFEALNVNDEIQKVLTKYQDLKKPSAVPREPEPAMIPVAVEPDESPRHAKEDALVRKPATSRGRSLGGSSDDMMDDLDEMIFGKKGGSGSDRGNESKKPDSSKDNDLISF
BLAST of Cla020013 vs. Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2) HSP 1 Score: 117.9 bits (294), Expect = 2.6e-25 Identity = 112/399 (28.07%), Postives = 179/399 (44.86%), Query Frame = 1
BLAST of Cla020013 vs. Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 9.9e-25 Identity = 119/388 (30.67%), Postives = 172/388 (44.33%), Query Frame = 1
BLAST of Cla020013 vs. Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2) HSP 1 Score: 107.1 bits (266), Expect = 4.6e-22 Identity = 69/180 (38.33%), Postives = 100/180 (55.56%), Query Frame = 1
BLAST of Cla020013 vs. Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 4.6e-22 Identity = 65/162 (40.12%), Postives = 91/162 (56.17%), Query Frame = 1
BLAST of Cla020013 vs. Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 2.3e-21 Identity = 63/162 (38.89%), Postives = 92/162 (56.79%), Query Frame = 1
BLAST of Cla020013 vs. TrEMBL
Match: B9S215_RICCO (Protein transporter, putative OS=Ricinus communis GN=RCOM_1325470 PE=4 SV=1) HSP 1 Score: 637.1 bits (1642), Expect = 1.4e-179 Identity = 321/396 (81.06%), Postives = 356/396 (89.90%), Query Frame = 1
BLAST of Cla020013 vs. TrEMBL
Match: A0A061F6F1_THECC (Target of Myb protein 1 isoform 1 OS=Theobroma cacao GN=TCM_025471 PE=4 SV=1) HSP 1 Score: 632.9 bits (1631), Expect = 2.7e-178 Identity = 320/402 (79.60%), Postives = 356/402 (88.56%), Query Frame = 1
BLAST of Cla020013 vs. TrEMBL
Match: V4TSP4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020497mg PE=4 SV=1) HSP 1 Score: 630.9 bits (1626), Expect = 1.0e-177 Identity = 317/396 (80.05%), Postives = 355/396 (89.65%), Query Frame = 1
BLAST of Cla020013 vs. TrEMBL
Match: A0A067JG72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00550 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 6.6e-177 Identity = 316/396 (79.80%), Postives = 355/396 (89.65%), Query Frame = 1
BLAST of Cla020013 vs. TrEMBL
Match: A0A151SD01_CAJCA (TOM1-like protein 2 OS=Cajanus cajan GN=KK1_025451 PE=4 SV=1) HSP 1 Score: 627.5 bits (1617), Expect = 1.1e-176 Identity = 307/396 (77.53%), Postives = 357/396 (90.15%), Query Frame = 1
BLAST of Cla020013 vs. NCBI nr
Match: gi|659069995|ref|XP_008452808.1| (PREDICTED: TOM1-like protein 2 [Cucumis melo]) HSP 1 Score: 740.7 bits (1911), Expect = 1.3e-210 Identity = 376/396 (94.95%), Postives = 383/396 (96.72%), Query Frame = 1
BLAST of Cla020013 vs. NCBI nr
Match: gi|449453960|ref|XP_004144724.1| (PREDICTED: TOM1-like protein 2 [Cucumis sativus]) HSP 1 Score: 738.0 bits (1904), Expect = 8.5e-210 Identity = 374/396 (94.44%), Postives = 383/396 (96.72%), Query Frame = 1
BLAST of Cla020013 vs. NCBI nr
Match: gi|1009123383|ref|XP_015878512.1| (PREDICTED: TOM1-like protein 2 [Ziziphus jujuba]) HSP 1 Score: 646.0 bits (1665), Expect = 4.4e-182 Identity = 329/399 (82.46%), Postives = 359/399 (89.97%), Query Frame = 1
BLAST of Cla020013 vs. NCBI nr
Match: gi|255558011|ref|XP_002520034.1| (PREDICTED: target of Myb protein 1 [Ricinus communis]) HSP 1 Score: 637.1 bits (1642), Expect = 2.0e-179 Identity = 321/396 (81.06%), Postives = 356/396 (89.90%), Query Frame = 1
BLAST of Cla020013 vs. NCBI nr
Match: gi|590639139|ref|XP_007029586.1| (Target of Myb protein 1 isoform 1 [Theobroma cacao]) HSP 1 Score: 632.9 bits (1631), Expect = 3.8e-178 Identity = 320/402 (79.60%), Postives = 356/402 (88.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |