Cla019635 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019635
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Dynamin family protein (AHRD V1 ***- D7KWT5_ARALL); contains Interpro domain(s) IPR015577 Interferon-induced Mx protein
Location	Chr3 : 7900264 .. 7900758 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTGTAGAAATGGAGAAACTCACCGATTACACATGCAACCCTGAATATGGTTCCGAGTGGAAAAAGTTGATTTCGCAGCAAGAATCGTTCATAAAAAGAGTGGTTGAAAATTCAGCTCCGAAAATCACGGTCGAAGGGTTTGGGGATGTGGAGGTGGGAGAGCTTCGGCAGTACGAGCATCTTCTTCCACAAGCGTTCGATCTGAGAGTGAGGATGACAGCGTACTGGAAGATCGTTCTGAAGAGACTAGTGGATTGTATGGCGCTTCATCTTGAATACAGTATCGGTAAATTGATAAACGAAGAACTTGAAGCGGAGATCGTGAATGAACTGTTGGGACCTAGCGGCGTCGGAATCGAGAAGATGCTGGAGGAATCTCCTAACCTTGCTCTGAGAAGGGATAGACTCAATCGGAGCATTGGGCGGCTCCGGGAGTCCAAGGAGGTGGTTGCCAACATTCTTGATCGGATTGCAACTTTCGACGGATGA

mRNA sequence

ATGGAGTTTGTAGAAATGGAGAAACTCACCGATTACACATGCAACCCTGAATATGGTTCCGAGTGGAAAAAGTTGATTTCGCAGCAAGAATCGTTCATAAAAAGAGTGGTTGAAAATTCAGCTCCGAAAATCACGGTCGAAGGGTTTGGGGATGTGGAGGTGGGAGAGCTTCGGCAGTACGAGCATCTTCTTCCACAAGCGTTCGATCTGAGAGTGAGGATGACAGCGTACTGGAAGATCGTTCTGAAGAGACTAGTGGATTGTATGGCGCTTCATCTTGAATACAGTATCGGTAAATTGATAAACGAAGAACTTGAAGCGGAGATCGTGAATGAACTGTTGGGACCTAGCGGCGTCGGAATCGAGAAGATGCTGGAGGAATCTCCTAACCTTGCTCTGAGAAGGGATAGACTCAATCGGAGCATTGGGCGGCTCCGGGAGTCCAAGGAGGTGGTTGCCAACATTCTTGATCGGATTGCAACTTTCGACGGATGA

Coding sequence (CDS)

ATGGAGTTTGTAGAAATGGAGAAACTCACCGATTACACATGCAACCCTGAATATGGTTCCGAGTGGAAAAAGTTGATTTCGCAGCAAGAATCGTTCATAAAAAGAGTGGTTGAAAATTCAGCTCCGAAAATCACGGTCGAAGGGTTTGGGGATGTGGAGGTGGGAGAGCTTCGGCAGTACGAGCATCTTCTTCCACAAGCGTTCGATCTGAGAGTGAGGATGACAGCGTACTGGAAGATCGTTCTGAAGAGACTAGTGGATTGTATGGCGCTTCATCTTGAATACAGTATCGGTAAATTGATAAACGAAGAACTTGAAGCGGAGATCGTGAATGAACTGTTGGGACCTAGCGGCGTCGGAATCGAGAAGATGCTGGAGGAATCTCCTAACCTTGCTCTGAGAAGGGATAGACTCAATCGGAGCATTGGGCGGCTCCGGGAGTCCAAGGAGGTGGTTGCCAACATTCTTGATCGGATTGCAACTTTCGACGGATGA

Protein sequence

MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVVENSAPKITVEGFGDVEVGELRQYEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGVGIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATFDG

Homology

[Close]

BLAST of Cla019635 vs. Swiss-Prot
Match: DRP4C_ARATH (Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.9e-40
Identity = 87/162 (53.70%), Postives = 116/162 (71.60%), Query Frame = 1


Query: 1   MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVV--ENSAPKITVEGFGDVEVGELR 60
           ME VEMEKLTDYTCNPEY + W +  S QESFI  VV  EN     +V GFG+V++  LR
Sbjct: 506 MEIVEMEKLTDYTCNPEYMTSWTQKTSAQESFIDAVVKNENIPDYFSVTGFGNVKISHLR 565

Query: 61  QYE-HLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGP- 120
           +Y  HLL  AFD+++R+T+YWKIVL+R+VD +AL+L+ S+  L+N   + EIV E++ P 
Sbjct: 566 KYHAHLLIPAFDMKMRITSYWKIVLRRIVDNLALYLQLSVKSLVNTRFQKEIVAEMVDPR 625

Query: 121 SGVGIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDR 159
            G G+EKMLEESP +A +R++L  SI  L+ESK+ VA I+D+
Sbjct: 626 DGGGVEKMLEESPLVASKREKLQNSIKLLKESKDAVAAIVDQ 667

[Close]

BLAST of Cla019635 vs. TrEMBL
Match: A0A0A0LX52_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G467140 PE=3 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 8.2e-73
Identity = 137/164 (83.54%), Postives = 152/164 (92.68%), Query Frame = 1


Query: 1   MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVVENSAPKITVEGFGDVEVGELRQY 60
           MEFVEMEKLTDYTCNPEYG+EW KLISQQESF+K+V EN A KIT+ G+G+VEVG LRQY
Sbjct: 522 MEFVEMEKLTDYTCNPEYGTEWNKLISQQESFVKQVNENLAQKITIVGYGEVEVGGLRQY 581

Query: 61  EHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGVG 120
           E+LLPQA+DLR+RMTAYWKIVLKRLVDCMALHLEYSI KLINEELE EIVNE+LGP GVG
Sbjct: 582 EYLLPQAYDLRMRMTAYWKIVLKRLVDCMALHLEYSIDKLINEELEPEIVNEILGPGGVG 641

Query: 121 IEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATFDG 165
           IEKMLEESP+L L+RD+LNRS+GRLRE+KEVV NILDRIATF G
Sbjct: 642 IEKMLEESPSLVLKRDKLNRSVGRLREAKEVVGNILDRIATFGG 685

[Close]

BLAST of Cla019635 vs. TrEMBL
Match: M5VXC7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016613mg PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-51
Identity = 100/163 (61.35%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 2   EFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVV--ENSAPKITVEGFGDVEVGELRQ 61
           E V+MEKL DYTC+PEY SEW +L+SQQ +FI  V+  E     + +EG G+VEVG LRQ
Sbjct: 445 EIVDMEKLADYTCDPEYVSEWNRLMSQQNAFIDGVLNDEKRPSVVAIEGIGEVEVGVLRQ 504

Query: 62  YEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGV 121
           + H+L QAFDL++RMTAYWK+VL+R VDCMALHL+ S+  L+N+E+EAEIVNEL+GP G 
Sbjct: 505 FPHVLGQAFDLKMRMTAYWKVVLRRFVDCMALHLQLSVSNLVNKEMEAEIVNELMGPYGG 564

Query: 122 GIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATF 163
           GIE+MLEESP +A++R++LN+SI +LR+SKEVVA I+D I ++
Sbjct: 565 GIERMLEESPTVAVKREKLNKSIKKLRDSKEVVAKIMDSINSY 607

[Close]

BLAST of Cla019635 vs. TrEMBL
Match: M5VUC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002498mg PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 99/163 (60.74%), Postives = 131/163 (80.37%), Query Frame = 1


Query: 2   EFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVVENSA--PKITVEGFGDVEVGELRQ 61
           E V+MEKLTDYTC+PEY +EW +L++ Q++FI  V++N      IT+EG G+VEV  LRQ
Sbjct: 502 EIVDMEKLTDYTCDPEYIAEWNRLMAHQKTFIDGVLDNKKRPSTITIEGIGEVEVEVLRQ 561

Query: 62  YEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGV 121
           Y  +LPQAFDL++RM AYWK+V++R VD MALHL+ SI  L+N+E+EAEIVNEL+GP G 
Sbjct: 562 YPLMLPQAFDLKMRMAAYWKVVMRRFVDFMALHLQLSISNLVNKEMEAEIVNELMGPYGG 621

Query: 122 GIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATF 163
           GIE+MLEESP +A++R  LN+SI +LR+SKEVVA I+D I T+
Sbjct: 622 GIERMLEESPAVAVKRANLNKSIRKLRDSKEVVAKIIDSIVTY 664

[Close]

BLAST of Cla019635 vs. TrEMBL
Match: A0A061EZV0_THECC (Dynamin related protein 4C OS=Theobroma cacao GN=TCM_025339 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-49
Identity = 102/165 (61.82%), Postives = 133/165 (80.61%), Query Frame = 1


Query: 2   EFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRV---VENSAPKITVEGFGDVEVGELR 61
           E V+MEKLTDYTCNP+Y  +W KL++QQESF K+V   V     ++++EGFGD+EV  LR
Sbjct: 497 EIVQMEKLTDYTCNPDYMVKWTKLMTQQESFHKKVNDAVMYGHSRVSLEGFGDIEVEHLR 556

Query: 62  QYEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSG 121
           Q+ ++L QAFDL+VRMTAYWKIVL+RLVD MALHL+YS+  L+N ++E EIVNEL+GP G
Sbjct: 557 QHRNVLDQAFDLKVRMTAYWKIVLRRLVDSMALHLQYSVHNLVNNDME-EIVNELMGPDG 616

Query: 122 VGIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATFD 164
            GIE+ML ESP +A +R++L RSI  L+ESK+VVA I+DRIA +D
Sbjct: 617 RGIERMLVESPAIAGKREKLKRSIKLLKESKDVVAKIMDRIAGYD 660

[Close]

BLAST of Cla019635 vs. TrEMBL
Match: A0A061EXZ4_THECC (Dynamin related protein 4C OS=Theobroma cacao GN=TCM_025336 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.4e-48
Identity = 101/165 (61.21%), Postives = 133/165 (80.61%), Query Frame = 1


Query: 2   EFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRV---VENSAPKITVEGFGDVEVGELR 61
           E V+MEKLTDYTCNP+Y  +W KL++QQESF K+V   V     ++++EGFGD+EV  LR
Sbjct: 530 EIVQMEKLTDYTCNPDYMVKWTKLMTQQESFHKKVNDAVMYGHSRVSLEGFGDIEVEHLR 589

Query: 62  QYEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSG 121
           ++ ++L QAFDL+VRMTAYWKIVL+RLVD MALHL+YS+  L+N ++E EIVNEL+GP G
Sbjct: 590 RHRNVLHQAFDLKVRMTAYWKIVLRRLVDSMALHLQYSVHNLVNNDME-EIVNELMGPDG 649

Query: 122 VGIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATFD 164
            GIE+ML ESP +A +R++L RSI  L+ESK+VVA I+DRIA +D
Sbjct: 650 RGIERMLVESPAIAGKREKLKRSIKLLKESKDVVAKIMDRIAGYD 693

[Close]

BLAST of Cla019635 vs. NCBI nr
Match: gi|778661113|ref|XP_004147422.2| (PREDICTED: dynamin-related protein 4C-like [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72
Identity = 137/164 (83.54%), Postives = 152/164 (92.68%), Query Frame = 1


Query: 1   MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVVENSAPKITVEGFGDVEVGELRQY 60
           MEFVEMEKLTDYTCNPEYG+EW KLISQQESF+K+V EN A KIT+ G+G+VEVG LRQY
Sbjct: 522 MEFVEMEKLTDYTCNPEYGTEWNKLISQQESFVKQVNENLAQKITIVGYGEVEVGGLRQY 581

Query: 61  EHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGVG 120
           E+LLPQA+DLR+RMTAYWKIVLKRLVDCMALHLEYSI KLINEELE EIVNE+LGP GVG
Sbjct: 582 EYLLPQAYDLRMRMTAYWKIVLKRLVDCMALHLEYSIDKLINEELEPEIVNEILGPGGVG 641

Query: 121 IEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATFDG 165
           IEKMLEESP+L L+RD+LNRS+GRLRE+KEVV NILDRIATF G
Sbjct: 642 IEKMLEESPSLVLKRDKLNRSVGRLREAKEVVGNILDRIATFGG 685

[Close]

BLAST of Cla019635 vs. NCBI nr
Match: gi|659068281|ref|XP_008443645.1| (PREDICTED: dynamin-related protein 4C-like [Cucumis melo])

HSP 1 Score: 276.2 bits (705), Expect = 3.8e-71
Identity = 136/164 (82.93%), Postives = 154/164 (93.90%), Query Frame = 1


Query: 1   MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVVENSAPKITVEGFGDVEVGELRQY 60
           MEFVEMEKLTDYTCNPEYG+E  KLISQQESF+K+V  +SAPKI +EG+G+VEVGELRQY
Sbjct: 522 MEFVEMEKLTDYTCNPEYGTERNKLISQQESFVKQVFGSSAPKIMIEGYGEVEVGELRQY 581

Query: 61  EHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGVG 120
           E+LLPQA+DLR+ MTAYWKIVLKRLVDCMALHLEYSI KLI+EELE+EIVNELLGP GVG
Sbjct: 582 EYLLPQAYDLRMTMTAYWKIVLKRLVDCMALHLEYSIEKLIDEELESEIVNELLGPGGVG 641

Query: 121 IEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATFDG 165
           +EKMLEE+PNL+L+RD+LNRSIGRLRESK+VVAN LDRIATF G
Sbjct: 642 MEKMLEEAPNLSLKRDKLNRSIGRLRESKKVVANALDRIATFVG 685

[Close]

BLAST of Cla019635 vs. NCBI nr
Match: gi|595819804|ref|XP_007204552.1| (hypothetical protein PRUPE_ppa016613mg [Prunus persica])

HSP 1 Score: 211.1 bits (536), Expect = 1.5e-51
Identity = 100/163 (61.35%), Postives = 133/163 (81.60%), Query Frame = 1


Query: 2   EFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVV--ENSAPKITVEGFGDVEVGELRQ 61
           E V+MEKL DYTC+PEY SEW +L+SQQ +FI  V+  E     + +EG G+VEVG LRQ
Sbjct: 445 EIVDMEKLADYTCDPEYVSEWNRLMSQQNAFIDGVLNDEKRPSVVAIEGIGEVEVGVLRQ 504

Query: 62  YEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSGV 121
           + H+L QAFDL++RMTAYWK+VL+R VDCMALHL+ S+  L+N+E+EAEIVNEL+GP G 
Sbjct: 505 FPHVLGQAFDLKMRMTAYWKVVLRRFVDCMALHLQLSVSNLVNKEMEAEIVNELMGPYGG 564

Query: 122 GIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATF 163
           GIE+MLEESP +A++R++LN+SI +LR+SKEVVA I+D I ++
Sbjct: 565 GIERMLEESPTVAVKREKLNKSIKKLRDSKEVVAKIMDSINSY 607

[Close]

BLAST of Cla019635 vs. NCBI nr
Match: gi|470125185|ref|XP_004298586.1| (PREDICTED: dynamin-related protein 4C-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 209.1 bits (531), Expect = 5.7e-51
Identity = 101/164 (61.59%), Postives = 131/164 (79.88%), Query Frame = 1


Query: 1   MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVV--ENSAPKITVEGFGDVEVGELR 60
           ME VEMEKLTDYTC+PEY +EW KL++QQE F+  V+  EN    + +EG G+VEV  LR
Sbjct: 521 MEIVEMEKLTDYTCDPEYVAEWNKLMAQQEPFMNGVLHDENRPSTVAIEGIGEVEVAVLR 580

Query: 61  QYEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSG 120
            Y H L QAFDL++RMTAYWK+VL+R VDCMALHL  S+  L+++E+E EIVNEL+GP G
Sbjct: 581 HYPHQLVQAFDLKMRMTAYWKVVLRRFVDCMALHLLLSVSNLVSKEMEVEIVNELMGPYG 640

Query: 121 VGIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATF 163
            GIE+MLEESP +A++R++LN+SI +LRESKEVVA I+D I ++
Sbjct: 641 GGIERMLEESPAVAVKREKLNKSIKKLRESKEVVAKIMDGIISY 684

[Close]

BLAST of Cla019635 vs. NCBI nr
Match: gi|694324050|ref|XP_009353064.1| (PREDICTED: dynamin-related protein 4C-like [Pyrus x bretschneideri])

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50
Identity = 100/164 (60.98%), Postives = 133/164 (81.10%), Query Frame = 1


Query: 1   MEFVEMEKLTDYTCNPEYGSEWKKLISQQESFIKRVV--ENSAPKITVEGFGDVEVGELR 60
           +E VEMEKLTDYTC+ +Y SEW KL++ Q SF+  V+  EN    I +EG G+VEVG LR
Sbjct: 510 LELVEMEKLTDYTCDADYVSEWNKLMASQNSFVHGVLTDENKPSIIAIEGIGEVEVGVLR 569

Query: 61  QYEHLLPQAFDLRVRMTAYWKIVLKRLVDCMALHLEYSIGKLINEELEAEIVNELLGPSG 120
           +Y H+L QA+DL++RMTAYWK+VL+R VD MALHL+ S+  L+N+E+EAEIVNEL+GP G
Sbjct: 570 KYPHVLAQAYDLKMRMTAYWKVVLRRFVDFMALHLQLSVFNLVNKEMEAEIVNELMGPYG 629

Query: 121 VGIEKMLEESPNLALRRDRLNRSIGRLRESKEVVANILDRIATF 163
            GIE+MLEESP +A++R++LN+SI +LR+SKEVVA I+D I T+
Sbjct: 630 GGIERMLEESPAVAVKREKLNKSIKKLRDSKEVVAKIMDSIITY 673

The following BLAST results are available for this feature:

BLAST of Cla019635 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRP4C_ARATH	5.9e-40	53.70	Dynamin-related protein 4C OS=Arabidopsis thaliana GN=DRP4C PE=2 SV=1	[more]

BLAST of Cla019635 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX52_CUCSA	8.2e-73	83.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G467140 PE=3 SV=1	[more]
M5VXC7_PRUPE	1.0e-51	61.35	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016613mg PE=3 SV=1	[more]
M5VUC9_PRUPE	1.7e-49	60.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002498mg PE=3 SV=1	[more]
A0A061EZV0_THECC	3.7e-49	61.82	Dynamin related protein 4C OS=Theobroma cacao GN=TCM_025339 PE=3 SV=1	[more]
A0A061EXZ4_THECC	1.4e-48	61.21	Dynamin related protein 4C OS=Theobroma cacao GN=TCM_025336 PE=3 SV=1	[more]

BLAST of Cla019635 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661113\|ref\|XP_004147422.2\|	1.2e-72	83.54	PREDICTED: dynamin-related protein 4C-like [Cucumis sativus]	[more]
gi\|659068281\|ref\|XP_008443645.1\|	3.8e-71	82.93	PREDICTED: dynamin-related protein 4C-like [Cucumis melo]	[more]
gi\|595819804\|ref\|XP_007204552.1\|	1.5e-51	61.35	hypothetical protein PRUPE_ppa016613mg [Prunus persica]	[more]
gi\|470125185\|ref\|XP_004298586.1\|	5.7e-51	61.59	PREDICTED: dynamin-related protein 4C-like [Fragaria vesca subsp. vesca]	[more]
gi\|694324050\|ref\|XP_009353064.1\|	2.2e-50	60.98	PREDICTED: dynamin-related protein 4C-like [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003130	GED
IPR020850	GED_dom
IPR022812	Dynamin_SF

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0008017	microtubule binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019635	Cla019635.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003130	Dynamin GTPase effector	PFAM	PF02212	GED	coord: 66..154 score: 6.2
IPR003130	Dynamin GTPase effector	SMART	SM00302	GED_2	coord: 59..155 score: 0.
IPR020850	GTPase effector domain	PROFILE	PS51388	GED	coord: 67..160 score: 19
IPR022812	Dynamin superfamily	PANTHER	PTHR11566	DYNAMIN	coord: 1..161 score: 1.8
None	No IPR available	PANTHER	PTHR11566:SF45	DYNAMIN-RELATED PROTEIN 4C-RELATED	coord: 1..161 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019635	Cla97C03G058630	Watermelon (97103) v2	wmwmbB124
Cla019635	Bhi08G001758	Wax gourd	wgowmB472

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019635	Cucumber (Gy14) v2	cgybwmB451
Cla019635	Cucumber (Gy14) v2	cgybwmB544
Cla019635	Melon (DHL92) v3.6.1	medwmB144
Cla019635	Melon (DHL92) v3.6.1	medwmB219
Cla019635	Melon (DHL92) v3.6.1	medwmB549
Cla019635	Silver-seed gourd	carwmB0141
Cla019635	Silver-seed gourd	carwmB0544
Cla019635	Silver-seed gourd	carwmB0797
Cla019635	Silver-seed gourd	carwmB0956
Cla019635	Cucumber (Chinese Long) v3	cucwmB014
Cla019635	Cucumber (Chinese Long) v3	cucwmB506
Cla019635	Cucumber (Chinese Long) v3	cucwmB611
Cla019635	Watermelon (97103) v2	wmwmbB113
Cla019635	Watermelon (97103) v2	wmwmbB121
Cla019635	Watermelon (97103) v2	wmwmbB138
Cla019635	Wax gourd	wgowmB367
Cla019635	Watermelon (97103) v1	wmwmB079
Cla019635	Watermelon (97103) v1	wmwmB084
Cla019635	Watermelon (97103) v1	wmwmB093
Cla019635	Cucumber (Gy14) v1	cgywmB022
Cla019635	Cucumber (Gy14) v1	cgywmB377
Cla019635	Cucumber (Gy14) v1	cgywmB408
Cla019635	Cucurbita maxima (Rimu)	cmawmB186
Cla019635	Cucurbita maxima (Rimu)	cmawmB370
Cla019635	Cucurbita maxima (Rimu)	cmawmB485
Cla019635	Cucurbita maxima (Rimu)	cmawmB622
Cla019635	Cucurbita maxima (Rimu)	cmawmB819
Cla019635	Cucurbita moschata (Rifu)	cmowmB174
Cla019635	Cucurbita moschata (Rifu)	cmowmB362
Cla019635	Cucurbita moschata (Rifu)	cmowmB613
Cla019635	Cucurbita moschata (Rifu)	cmowmB809
Cla019635	Melon (DHL92) v3.5.1	mewmB147
Cla019635	Melon (DHL92) v3.5.1	mewmB223
Cla019635	Melon (DHL92) v3.5.1	mewmB562
Cla019635	Watermelon (Charleston Gray)	wcgwmB125
Cla019635	Watermelon (Charleston Gray)	wcgwmB186
Cla019635	Watermelon (Charleston Gray)	wcgwmB223
Cla019635	Cucumber (Chinese Long) v2	cuwmB009
Cla019635	Cucumber (Chinese Long) v2	cuwmB480
Cla019635	Cucumber (Chinese Long) v2	cuwmB582
Cla019635	Cucurbita pepo (Zucchini)	cpewmB024
Cla019635	Cucurbita pepo (Zucchini)	cpewmB069
Cla019635	Cucurbita pepo (Zucchini)	cpewmB279
Cla019635	Cucurbita pepo (Zucchini)	cpewmB478
Cla019635	Cucurbita pepo (Zucchini)	cpewmB508
Cla019635	Bottle gourd (USVL1VR-Ls)	lsiwmB053
Cla019635	Bottle gourd (USVL1VR-Ls)	lsiwmB136
Cla019635	Bottle gourd (USVL1VR-Ls)	lsiwmB188
Cla019635	Cucumber (Gy14) v2	cgybwmB011