Cla019598 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019598
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown Protein (AHRD V1)
Location	Chr3 : 7489239 .. 7492270 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTACGCAAGACCTGACTAATATTGTTTTTCCAATCTTTGTGGAAACACCTGGATGGATTAGGAAAAAAAATGAAAAAGAAAACCTGGATGGATCAAGAACTTGCAGCAGCTTAAACCAGCACTCGTAATTGAAAAGGCAAAACCAAAACCAATGTCCTCAATCCTTTATACTGCTCTTACACAATTATGTGTGAGCAAGCAAGGAAATGTTAATATTTACATGAATGTTGAATTTTTTCTTTTATATACATATTGATAAAAGCATTGATAACATATTGAAACTAATGAACATTAAAGATCGTGGAATTGATATCAACAAATATTCCTTAGTGAAGTTTTAGTGAGATGAGGAAGAACTTTCTTTATTCTCTCGGCCAAAACTATTGCAATAATGAGACGAGTTAGAAAAGGATATACCTCCTTTTATTTTTAATTTTTTATTCCATTTCATTATTGTCTTATTGGAAAGATGTTGCTTATGTATCTGCGGAAAACGTTTATAGGGTTGACCTTTGCCATCAGCCAGATGATGAAGATGACGAGGATGAAGAGACGAGTTTCGAGGAAGGCTTGTTGGAGAAGATCTCTAGTAAACCAAGTACATCAAATACAGACTGGAGCAGGAGATGGTGGCTTCCATTGCGGCTGCCACATGTTGGAAGCCGTCAAAATTTAGTAATACTGGTACATGACATAATGTTCTTTCTAGCATCCTGTAAGGCCCCTAGTTAGGAAATTATTAGGATTATTAGGATGGTTATTAGTAGGGGCATATTAGTACATAGCTAGTAAGTTTGATAGGGCTTTTAGTTATAAATAGAGGGACTGAGTTGGGAGCATGGGGTGGATCATTTTTGTAGGAATTTCTAGTTTGGGAATTTTGGAAGAGGGTAGCCCCTCGAAAGGCTACGATATTATAGTTTCTTTATTGATATTACAATATAATTCTAAAAGATGTTCTTTGATGTTCTTGAGTATTCTCTTAGGTGTTAACCTAACACATCCACTCTGATTTTCTTTATATCCCCTCTTGTCTCTGCTTGAGTGGATGCGATTGCTTACAAAGAACTTGAAATACTCAATTGACAAATCTGATCACTGGCTGTTTATGTACAGGTGGTTGCAATTATCTTTGTTTTGACATTGGCATTTGCTGTGATACTGTGGCTTGAGATGGGAAACAAATCCCTTGATTCTTTGGTAGTTGTTCAGGTATGAAGAACCTTAAAGAAGATTTGTATTCAACTTACCTTTTTCGAATAGAAAGCACGACATTAAAGTACAAATCCACTGACCACCGAAATGTCTCTATGACAAAAAACATGTCTTAATATCAGCTTCCAGTTCCTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTCTTTTTTAATTTTTTTTTTTTATTGATATGCAATGAAATAGGAATTAATGTGGCAATCAATTTTACTATTGTGCAGGTAGTATATGTAGATCTTTTTGCTGTAGTCACACTGTTATTAGGAGGCGCATTGGCTTACTATGGTTTGCAACTATTCTTTGTACTAGCTATCAGTTATTTTTAGTGTCTTCACTCATAATTCTCAATTCTAGTTTGATTGAAATTCTGTCCTACGGCTATTGCCTTACTGCATAAGAACCAAGGATCTCTTCCTTAATACGTCTGATAATTTTGTCTCTCCCTAAAAGAACCTCTTTCAATGGAAGTTAAAGAAGTTTATACAAAAACTCAGGCCAATATGAAATGCAGGGGCATCCAAAATATAATGACAGCTTTCTGGGAGATTTTGATTGATCAAGTATATAAAAGACGAAGCTTAAAAAACTTATATAATTCCGAGTAGTAGGACTTTATCTTTTATGGTTTGTCAAATTAATTACATTGTTATGAATCTCTCTCTCTCTCTCTCTCTTCGACATTCAGGATTGCTGTTGTTCTTGAAAATGAGAAGGGTTAGATCTGAGAGGGCATCTTCTGAAATATTGAAGGTAGCAGACTATTGATTGTTGCTTGCTACCTATTACCTCTTCCAAACATTTCAGACTTTCTATTTTTTATGGTTGATGTTGATGTTGATGTTTTAGCAGTTTTGTTTTCTGAGTTTGTATATACATAACCTCTTAATTGTTCACTCTTTAACGGATTGCGGCTTTGTTGCATTCCAGGTTGCAGGTTTGGCTGCTGTGTCTGTTATATGTTTCACTTCGAGTGCACTTGTAGCTCTTTTAACAAATATTCCGGTATGCAGTACAATTTAACTAATCAATTTTTGTTTTCTTGAGAGAAAGGCCAAAGAAAAAGTGGACATGTTCGATCAGTTTCCAAAACTTACTCATTATGGTTGCAGGTAGCTAATCAATGGCTGCAACAGTATCACATTTATGGTGCATATACTTCTATTTTGCAGATTACATATTATTTTATAGGTATCAGCTTTCAAAGTTAGTTTATTGTGCTTGGTACTTGAGTTTTGGATCTGTCTAAGTTGTAGTTAGCCTCTTAAATGTTCCCTTTCATATTGAACCATTTGTTTTGGGAAATTGCTCAGGTCACCTACCTACTTAAATACCTGCCTCAGATTCATTTTCTTTGCTCTCTTCAAACATCTTATATCTCAAAAATAGTCTTACATCCTTGCAAGACTCCACCTTTTTACGGTTAGTTCCGGTCGACTTGGAACTCGTTTTAGTCATCAGATTGGAGGCCCCCTGCCTTCATCCCTCCCTTGGCCAGCCTGGGAAAATCTCTGGCATCTCACACTACGGAAGGGGAAGGAGGAACCCGATTTTCGGGTTTATACATTTTTCTTTGAATTTTAATATGAAGCAGATTATTATGCCAGGATCATCAATTCCTTCTGCATTTGTTCTCTGGATCATGAGAGAATTACCACCATGGATAGCAGCTAGTTCCCAAGAACAAGCAAGGACAATAACCTTTGTTTGCGACGAGTCTGCTGCTGTACATCGTCCTCAGGAATGGACTTTGGCAACAAATTCTCCGGTTTGTATTTCTTTCAATGAAACACAGTAG

mRNA sequence

ATGCTTACGCAAGACCTGACTAATATTGTTTTTCCAATCTTTGTGGAAACACCTGGATGGATTAGGAAAAAAAATGAAAAAGAAAACCTGGATGGATCAAGAACTTGCAGCAGCTTAAACCAGCACTCGGTTGACCTTTGCCATCAGCCAGATGATGAAGATGACGAGGATGAAGAGACGAGTTTCGAGGAAGGCTTGTTGGAGAAGATCTCTAGTAAACCAAGTACATCAAATACAGACTGGAGCAGGAGATGGTGGCTTCCATTGCGGCTGCCACATGTTGGAAGCCGTCAAAATTTAGTAATACTGGTGGTTGCAATTATCTTTGTTTTGACATTGGCATTTGCTGTGATACTGTGGCTTGAGATGGGAAACAAATCCCTTGATTCTTTGGTAGTTGTTCAGGTAGTATATGTAGATCTTTTTGCTGTAGTCACACTGTTATTAGGAGGCGCATTGGCTTACTATGGATTGCTGTTGTTCTTGAAAATGAGAAGGGTTAGATCTGAGAGGGCATCTTCTGAAATATTGAAGGTTGCAGGTTTGGCTGCTGTGTCTGTTATATGTTTCACTTCGAGTGCACTTGTAGCTCTTTTAACAAATATTCCGGTAGCTAATCAATGGCTGCAACAGTATCACATTTATGGTGCATATACTTCTATTTTGCAGATTACATATTATTTTATAGACTCCACCTTTTTACGGTTAGTTCCGGTCGACTTGGAACTCGTTTTAGTCATCAGATTGGAGGCCCCCTGCCTTCATCCCTCCCTTGGCCAGCCTGGGAAAATCTCTGGCATCTCACACTACGGAAGGGGAAGGAGGAACCCGATTTTCGGGTTTATACATTTTTCTTTGAATTTTAATATGAAGCAGATTATTATGCCAGGATCATCAATTCCTTCTGCATTTGTTCTCTGGATCATGAGAGAATTACCACCATGGATAGCAGCTAGTTCCCAAGAACAAGCAAGGACAATAACCTTTGTTTGCGACGAGTCTGCTGCTGTACATCGTCCTCAGGAATGGACTTTGGCAACAAATTCTCCGGTTTGTATTTCTTTCAATGAAACACAGTAG

Coding sequence (CDS)

ATGCTTACGCAAGACCTGACTAATATTGTTTTTCCAATCTTTGTGGAAACACCTGGATGGATTAGGAAAAAAAATGAAAAAGAAAACCTGGATGGATCAAGAACTTGCAGCAGCTTAAACCAGCACTCGGTTGACCTTTGCCATCAGCCAGATGATGAAGATGACGAGGATGAAGAGACGAGTTTCGAGGAAGGCTTGTTGGAGAAGATCTCTAGTAAACCAAGTACATCAAATACAGACTGGAGCAGGAGATGGTGGCTTCCATTGCGGCTGCCACATGTTGGAAGCCGTCAAAATTTAGTAATACTGGTGGTTGCAATTATCTTTGTTTTGACATTGGCATTTGCTGTGATACTGTGGCTTGAGATGGGAAACAAATCCCTTGATTCTTTGGTAGTTGTTCAGGTAGTATATGTAGATCTTTTTGCTGTAGTCACACTGTTATTAGGAGGCGCATTGGCTTACTATGGATTGCTGTTGTTCTTGAAAATGAGAAGGGTTAGATCTGAGAGGGCATCTTCTGAAATATTGAAGGTTGCAGGTTTGGCTGCTGTGTCTGTTATATGTTTCACTTCGAGTGCACTTGTAGCTCTTTTAACAAATATTCCGGTAGCTAATCAATGGCTGCAACAGTATCACATTTATGGTGCATATACTTCTATTTTGCAGATTACATATTATTTTATAGACTCCACCTTTTTACGGTTAGTTCCGGTCGACTTGGAACTCGTTTTAGTCATCAGATTGGAGGCCCCCTGCCTTCATCCCTCCCTTGGCCAGCCTGGGAAAATCTCTGGCATCTCACACTACGGAAGGGGAAGGAGGAACCCGATTTTCGGGTTTATACATTTTTCTTTGAATTTTAATATGAAGCAGATTATTATGCCAGGATCATCAATTCCTTCTGCATTTGTTCTCTGGATCATGAGAGAATTACCACCATGGATAGCAGCTAGTTCCCAAGAACAAGCAAGGACAATAACCTTTGTTTGCGACGAGTCTGCTGCTGTACATCGTCCTCAGGAATGGACTTTGGCAACAAATTCTCCGGTTTGTATTTCTTTCAATGAAACACAGTAG

Protein sequence

MLTQDLTNIVFPIFVETPGWIRKKNEKENLDGSRTCSSLNQHSVDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVILVVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLKMRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQITYYFIDSTFLRLVPVDLELVLVIRLEAPCLHPSLGQPGKISGISHYGRGRRNPIFGFIHFSLNFNMKQIIMPGSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNSPVCISFNETQ

Homology

[Close]

BLAST of Cla019598 vs. TrEMBL
Match: A0A0A0LUH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G446400 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 6.5e-91
Identity = 172/189 (91.01%), Postives = 180/189 (95.24%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQP+DEDDEDEE SFEEGLLEKISSKPSTSNTDWSRRWW+P+RLPHVGSRQNLVIL
Sbjct: 111 VDLCHQPEDEDDEDEERSFEEGLLEKISSKPSTSNTDWSRRWWVPVRLPHVGSRQNLVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           VV IIFVLTLAFAVILWLEMGN S+DSLV VQVVYVDLFAV+TLLLGGALA+YGLLLFLK
Sbjct: 171 VVTIIFVLTLAFAVILWLEMGNISIDSLVAVQVVYVDLFAVMTLLLGGALAFYGLLLFLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MRRVRSERASSEILKVAGLAAVSV+CFTSSALVA LTNIPV  QW +QYHIYGAYTSILQ
Sbjct: 231 MRRVRSERASSEILKVAGLAAVSVVCFTSSALVAFLTNIPVPIQWQRQYHIYGAYTSILQ 290

Query: 224 ITYYFIDST 233
           ITYYFI ST
Sbjct: 291 ITYYFIGST 299

[Close]

BLAST of Cla019598 vs. TrEMBL
Match: A0A0A0LUH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G446400 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 2.1e-20
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 1


Query: 297 GSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNSPV 352
           GS+IPSAFVLWIMRELPPWIAASSQEQ RTITFVCD++A VHRPQEWTL TNSPV
Sbjct: 297 GSTIPSAFVLWIMRELPPWIAASSQEQTRTITFVCDDAATVHRPQEWTLTTNSPV 351

HSP 2 Score: 216.1 bits (549), Expect = 7.1e-53
Identity = 118/189 (62.43%), Postives = 143/189 (75.66%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQPDDEDDEDEE+S +E LLEK  + PS+SN + S R    LR  H+GSRQ +VIL
Sbjct: 111 VDLCHQPDDEDDEDEESSSQEALLEKTLNLPSSSNKN-SHRKCCSLRAIHIGSRQKIVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           V+ +IFVL + FAV++W+ MG   +DS VV +V YVDLF++  LLLGGALA YGL+L LK
Sbjct: 171 VIVLIFVLMVTFAVLIWIGMGKNLIDSSVVARV-YVDLFSIAILLLGGALACYGLMLCLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MR+VRSERASSE+ KVAGLA VSVICFTSSA VAL T+IP+   W  Q  + G  TS+L 
Sbjct: 231 MRKVRSERASSEMSKVAGLAVVSVICFTSSAFVALFTDIPMLYHWHPQ-PVNGVSTSLLL 290

Query: 224 ITYYFIDST 233
           I YYFI S+
Sbjct: 291 ILYYFIGSS 296

[Close]

BLAST of Cla019598 vs. TrEMBL
Match: D7TK24_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03010 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.1e-08
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 1


Query: 297 GSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNSPVCIS 355
           GSS+PSAFVLW+MRELPP I      ++R +TF+ D S +V+ PQ W+ AT+S   IS
Sbjct: 294 GSSVPSAFVLWVMRELPPSITTVIYVESRPVTFISDSSESVNHPQRWSTATSSQNQIS 351

HSP 2 Score: 213.4 bits (542), Expect = 4.6e-52
Identity = 117/188 (62.23%), Postives = 138/188 (73.40%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQ DDE++ED+E  F E LL+   ++P +S TD SRR   P RL HVGSRQ +VIL
Sbjct: 106 VDLCHQADDEEEEDDEQGFLEALLQNSLNRPRSSTTD-SRRICYPFRLIHVGSRQKIVIL 165

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           V  ++F+  L FAV++W+ M +  +DS  V +V YVDLFA   LLLGGALA YGLLL  K
Sbjct: 166 VTVLVFLFMLTFAVLIWIGMEDNPIDSSTVARV-YVDLFAAAILLLGGALACYGLLLCRK 225

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MR VRSERASSEI KVAGLA VSV+CFTSSALVALLT+IPV   W  + HI G YTS+L 
Sbjct: 226 MRNVRSERASSEIWKVAGLAIVSVLCFTSSALVALLTDIPVLYHW-HELHIDGVYTSLLL 285

Query: 224 ITYYFIDS 232
           I YYFI S
Sbjct: 286 ILYYFIGS 290

[Close]

BLAST of Cla019598 vs. TrEMBL
Match: A0A061GF32_THECC (Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_029520 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.5e-06
Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 1


Query: 297 GSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNS 350
           GS++PSAFVLW+MRELPP ++A+ QE++ T+ F+ D+   + RPQ W  A +S
Sbjct: 289 GSAVPSAFVLWVMRELPP-MSANIQEESTTV-FITDDPVEIRRPQSWATAASS 339

HSP 2 Score: 213.4 bits (542), Expect = 4.6e-52
Identity = 117/188 (62.23%), Postives = 138/188 (73.40%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQ DDE++ED+E  F E LL+   ++P +S TD SRR   P RL HVGSRQ +VIL
Sbjct: 112 VDLCHQADDEEEEDDEQGFLEALLQNSLNRPRSSTTD-SRRICYPFRLIHVGSRQKIVIL 171

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           V  ++F+  L FAV++W+ M +  +DS  V +V YVDLFA   LLLGGALA YGLLL  K
Sbjct: 172 VTVLVFLFMLTFAVLIWIGMEDNPIDSSTVARV-YVDLFAAAILLLGGALACYGLLLCRK 231

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MR VRSERASSEI KVAGLA VSV+CFTSSALVALLT+IPV   W  + HI G YTS+L 
Sbjct: 232 MRNVRSERASSEIWKVAGLAIVSVLCFTSSALVALLTDIPVLYHW-HELHIDGVYTSLLL 291

Query: 224 ITYYFIDS 232
           I YYFI S
Sbjct: 292 ILYYFIGS 296

[Close]

BLAST of Cla019598 vs. TrEMBL
Match: A0A061GEB9_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_029520 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.5e-06
Identity = 27/53 (50.94%), Postives = 40/53 (75.47%), Query Frame = 1


Query: 297 GSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNS 350
           GS++PSAFVLW+MRELPP ++A+ QE++ T+ F+ D+   + RPQ W  A +S
Sbjct: 295 GSAVPSAFVLWVMRELPP-MSANIQEESTTV-FITDDPVEIRRPQSWATAASS 345

HSP 2 Score: 213.4 bits (542), Expect = 4.6e-52
Identity = 117/188 (62.23%), Postives = 138/188 (73.40%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQ DDE++ED+E  F E LL+   ++P +S TD SRR   P RL HVGSRQ +VIL
Sbjct: 112 VDLCHQADDEEEEDDEQGFLEALLQNSLNRPRSSTTD-SRRICYPFRLIHVGSRQKIVIL 171

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           V  ++F+  L FAV++W+ M +  +DS  V +V YVDLFA   LLLGGALA YGLLL  K
Sbjct: 172 VTVLVFLFMLTFAVLIWIGMEDNPIDSSTVARV-YVDLFAAAILLLGGALACYGLLLCRK 231

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MR VRSERASSEI KVAGLA VSV+CFTSSALVALLT+IPV   W  + HI G YTS+L 
Sbjct: 232 MRNVRSERASSEIWKVAGLAIVSVLCFTSSALVALLTDIPVLYHW-HELHIDGVYTSLLL 291

Query: 224 ITYYFIDS 232
           I YYFI S
Sbjct: 292 ILYYFIGS 296

[Close]

BLAST of Cla019598 vs. NCBI nr
Match: gi|778661002|ref|XP_011657328.1| (PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 342.4 bits (877), Expect = 9.4e-91
Identity = 172/189 (91.01%), Postives = 180/189 (95.24%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQP+DEDDEDEE SFEEGLLEKISSKPSTSNTDWSRRWW+P+RLPHVGSRQNLVIL
Sbjct: 111 VDLCHQPEDEDDEDEERSFEEGLLEKISSKPSTSNTDWSRRWWVPVRLPHVGSRQNLVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           VV IIFVLTLAFAVILWLEMGN S+DSLV VQVVYVDLFAV+TLLLGGALA+YGLLLFLK
Sbjct: 171 VVTIIFVLTLAFAVILWLEMGNISIDSLVAVQVVYVDLFAVMTLLLGGALAFYGLLLFLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MRRVRSERASSEILKVAGLAAVSV+CFTSSALVA LTNIPV  QW +QYHIYGAYTSILQ
Sbjct: 231 MRRVRSERASSEILKVAGLAAVSVVCFTSSALVAFLTNIPVPIQWQRQYHIYGAYTSILQ 290

Query: 224 ITYYFIDST 233
           ITYYFI ST
Sbjct: 291 ITYYFIGST 299

[Close]

BLAST of Cla019598 vs. NCBI nr
Match: gi|778661002|ref|XP_011657328.1| (PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 3.0e-20
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 1


Query: 297 GSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNSPV 352
           GS+IPSAFVLWIMRELPPWIAASSQEQ RTITFVCD++A VHRPQEWTL TNSPV
Sbjct: 297 GSTIPSAFVLWIMRELPPWIAASSQEQTRTITFVCDDAATVHRPQEWTLTTNSPV 351

HSP 2 Score: 341.7 bits (875), Expect = 1.6e-90
Identity = 171/187 (91.44%), Postives = 179/187 (95.72%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQP+DEDDEDEE SFEEGLLEKISSKPSTSNTDWSRRWW+P+RLPHVGSRQNLVIL
Sbjct: 111 VDLCHQPEDEDDEDEERSFEEGLLEKISSKPSTSNTDWSRRWWVPVRLPHVGSRQNLVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           VV IIFVLTLAFAVILWLEMGN S+DSLV VQVVYVDLFAV+TLLLGGALA+YGLLLFLK
Sbjct: 171 VVTIIFVLTLAFAVILWLEMGNISIDSLVAVQVVYVDLFAVMTLLLGGALAFYGLLLFLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MRRVRSERASSEILKVAGLAAVSV+CFTSSALVA LTNIPV  QW +QYHIYGAYTSILQ
Sbjct: 231 MRRVRSERASSEILKVAGLAAVSVVCFTSSALVAFLTNIPVPIQWQRQYHIYGAYTSILQ 290

Query: 224 ITYYFID 231
           ITYYFID
Sbjct: 291 ITYYFID 297

[Close]

BLAST of Cla019598 vs. NCBI nr
Match: gi|659068380|ref|XP_008444123.1| (PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 339.3 bits (869), Expect = 7.9e-90
Identity = 171/189 (90.48%), Postives = 178/189 (94.18%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQP+DEDDEDEE SFEEGLLEKISSKPSTSNTDWSRRWWLP+RLPHVGSRQNLVIL
Sbjct: 111 VDLCHQPEDEDDEDEERSFEEGLLEKISSKPSTSNTDWSRRWWLPVRLPHVGSRQNLVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           VV IIFVLTLAFAVILW EMGN S+DSLV VQVVYVD FAVVTLLLGGALA YGLLLFLK
Sbjct: 171 VVTIIFVLTLAFAVILWFEMGNISIDSLVAVQVVYVDFFAVVTLLLGGALAVYGLLLFLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MRRVRSERASSEI KVAGLAAVSV+CFTSSALVA+LTNIPV+ QW +QYHIYGAYTSILQ
Sbjct: 231 MRRVRSERASSEISKVAGLAAVSVVCFTSSALVAILTNIPVSIQWQRQYHIYGAYTSILQ 290

Query: 224 ITYYFIDST 233
           ITYYFI ST
Sbjct: 291 ITYYFIGST 299

[Close]

BLAST of Cla019598 vs. NCBI nr
Match: gi|659068380|ref|XP_008444123.1| (PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 109.4 bits (272), Expect = 1.3e-20
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 1


Query: 297 GSSIPSAFVLWIMRELPPWIAASSQEQARTITFVCDESAAVHRPQEWTLATNSPV 352
           GS+IPSAFVLWIMRELPPWIAASSQEQ RTITFVCD+SA VHRPQEWTL TNSPV
Sbjct: 297 GSTIPSAFVLWIMRELPPWIAASSQEQTRTITFVCDDSATVHRPQEWTLTTNSPV 351

HSP 2 Score: 339.3 bits (869), Expect = 7.9e-90
Identity = 170/186 (91.40%), Postives = 178/186 (95.70%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQP+DEDDEDEE SFEEGLLEKISSKPSTSNTDWSRRWW+P+RLPHVGSRQNLVIL
Sbjct: 111 VDLCHQPEDEDDEDEERSFEEGLLEKISSKPSTSNTDWSRRWWVPVRLPHVGSRQNLVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           VV IIFVLTLAFAVILWLEMGN S+DSLV VQVVYVDLFAV+TLLLGGALA+YGLLLFLK
Sbjct: 171 VVTIIFVLTLAFAVILWLEMGNISIDSLVAVQVVYVDLFAVMTLLLGGALAFYGLLLFLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MRRVRSERASSEILKVAGLAAVSV+CFTSSALVA LTNIPV  QW +QYHIYGAYTSILQ
Sbjct: 231 MRRVRSERASSEILKVAGLAAVSVVCFTSSALVAFLTNIPVPIQWQRQYHIYGAYTSILQ 290

Query: 224 ITYYFI 230
           ITYYFI
Sbjct: 291 ITYYFI 296

[Close]

BLAST of Cla019598 vs. NCBI nr
Match: gi|659068384|ref|XP_008444139.1| (PREDICTED: tobamovirus multiplication protein 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 336.3 bits (861), Expect = 6.7e-89
Identity = 169/186 (90.86%), Postives = 176/186 (94.62%), Query Frame = 1


Query: 44  VDLCHQPDDEDDEDEETSFEEGLLEKISSKPSTSNTDWSRRWWLPLRLPHVGSRQNLVIL 103
           VDLCHQP+DEDDEDEE SFEEGLLEKISSKPSTSNTDWSRRWWLP+RLPHVGSRQNLVIL
Sbjct: 111 VDLCHQPEDEDDEDEERSFEEGLLEKISSKPSTSNTDWSRRWWLPVRLPHVGSRQNLVIL 170

Query: 104 VVAIIFVLTLAFAVILWLEMGNKSLDSLVVVQVVYVDLFAVVTLLLGGALAYYGLLLFLK 163
           VV IIFVLTLAFAVILW EMGN S+DSLV VQVVYVD FAVVTLLLGGALA YGLLLFLK
Sbjct: 171 VVTIIFVLTLAFAVILWFEMGNISIDSLVAVQVVYVDFFAVVTLLLGGALAVYGLLLFLK 230

Query: 164 MRRVRSERASSEILKVAGLAAVSVICFTSSALVALLTNIPVANQWLQQYHIYGAYTSILQ 223
           MRRVRSERASSEI KVAGLAAVSV+CFTSSALVA+LTNIPV+ QW +QYHIYGAYTSILQ
Sbjct: 231 MRRVRSERASSEISKVAGLAAVSVVCFTSSALVAILTNIPVSIQWQRQYHIYGAYTSILQ 290

Query: 224 ITYYFI 230
           ITYYFI
Sbjct: 291 ITYYFI 296

The following BLAST results are available for this feature:

BLAST of Cla019598 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUH1_CUCSA	6.5e-91	91.01	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G446400 PE=4 SV=1	[more]
A0A0A0LUH1_CUCSA	2.1e-20	89.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G446400 PE=4 SV=1	[more]
D7TK24_VITVI	4.1e-08	53.45	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g03010 PE=4 SV=...	[more]
A0A061GF32_THECC	6.5e-06	50.94	Uncharacterized protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_029520 PE...	[more]
A0A061GEB9_THECC	6.5e-06	50.94	Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_029520 PE=4 SV=1	[more]

BLAST of Cla019598 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778661002\|ref\|XP_011657328.1\|	9.4e-91	91.01	PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Cucumis sativus]	[more]
gi\|778661002\|ref\|XP_011657328.1\|	3.0e-20	89.09	PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Cucumis sativus]	[more]
gi\|659068380\|ref\|XP_008444123.1\|	7.9e-90	90.48	PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo]	[more]
gi\|659068380\|ref\|XP_008444123.1\|	1.3e-20	90.91	PREDICTED: tobamovirus multiplication protein 1-like isoform X1 [Cucumis melo]	[more]
gi\|659068384\|ref\|XP_008444139.1\|	6.7e-89	90.86	PREDICTED: tobamovirus multiplication protein 1-like isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU22584	watermelon unigene v2 vs TrEMBL	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019598	Cla019598.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU22584	WMU22584	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31142	FAMILY NOT NAMED	coord: 44..57 score: 1.4E-73coord: 85..229 score: 1.4E-73coord: 297..349 score: 1.4
None	No IPR available	PANTHER	PTHR31142:SF4	SUBFAMILY NOT NAMED	coord: 85..229 score: 1.4E-73coord: 44..57 score: 1.4E-73coord: 297..349 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019598	Cla97C03G058220	Watermelon (97103) v2	wmwmbB124
Cla019598	Cla97C02G044280	Watermelon (97103) v2	wmwmbB121
Cla019598	Csa1G446400	Cucumber (Chinese Long) v2	cuwmB009
Cla019598	MELO3C002724	Melon (DHL92) v3.5.1	mewmB147
Cla019598	ClCG03G006980	Watermelon (Charleston Gray)	wcgwmB223
Cla019598	CSPI01G21330	Wild cucumber (PI 183967)	cpiwmB011
Cla019598	Cucsa.212310	Cucumber (Gy14) v1	cgywmB408
Cla019598	CmaCh18G004670	Cucurbita maxima (Rimu)	cmawmB370
Cla019598	CmoCh18G004430	Cucurbita moschata (Rifu)	cmowmB362
Cla019598	Lsi10G015360	Bottle gourd (USVL1VR-Ls)	lsiwmB053
Cla019598	Cp4.1LG09g07660	Cucurbita pepo (Zucchini)	cpewmB024
Cla019598	CsGy1G021020	Cucumber (Gy14) v2	cgybwmB011
Cla019598	MELO3C002724.2	Melon (DHL92) v3.6.1	medwmB144
Cla019598	Carg22532	Silver-seed gourd	carwmB0419
Cla019598	CsaV3_1G032560	Cucumber (Chinese Long) v3	cucwmB014
Cla019598	Bhi10G000756	Wax gourd	wgowmB367
Cla019598	Bhi08G001708	Wax gourd	wgowmB472

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019598	Watermelon (97103) v1	wmwmB084
Cla019598	Watermelon (97103) v1	wmwmB093
Cla019598	Cucumber (Gy14) v1	cgywmB022
Cla019598	Cucurbita maxima (Rimu)	cmawmB186
Cla019598	Cucurbita maxima (Rimu)	cmawmB622
Cla019598	Cucurbita maxima (Rimu)	cmawmB819
Cla019598	Cucurbita moschata (Rifu)	cmowmB174
Cla019598	Cucurbita moschata (Rifu)	cmowmB613
Cla019598	Cucurbita moschata (Rifu)	cmowmB809
Cla019598	Melon (DHL92) v3.5.1	mewmB562
Cla019598	Watermelon (Charleston Gray)	wcgwmB125
Cla019598	Cucumber (Chinese Long) v2	cuwmB480
Cla019598	Cucurbita pepo (Zucchini)	cpewmB069
Cla019598	Cucurbita pepo (Zucchini)	cpewmB279
Cla019598	Cucurbita pepo (Zucchini)	cpewmB478
Cla019598	Cucurbita pepo (Zucchini)	cpewmB508
Cla019598	Bottle gourd (USVL1VR-Ls)	lsiwmB136
Cla019598	Bottle gourd (USVL1VR-Ls)	lsiwmB188
Cla019598	Cucumber (Gy14) v2	cgybwmB451
Cla019598	Melon (DHL92) v3.6.1	medwmB549
Cla019598	Silver-seed gourd	carwmB0291
Cla019598	Silver-seed gourd	carwmB0544
Cla019598	Silver-seed gourd	carwmB0729
Cla019598	Silver-seed gourd	carwmB0797
Cla019598	Silver-seed gourd	carwmB0956
Cla019598	Cucumber (Chinese Long) v3	cucwmB506
Cla019598	Watermelon (97103) v2	wmwmbB113
Cla019598	Wax gourd	wgowmB421