Cla019589 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019589
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Intron maturase type II-like protein (AHRD V1 **-- Q9C8R8_ARATH); contains Interpro domain(s) IPR000442 Intron maturase, type II
Location	Chr3 : 7391863 .. 7392360 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGATTGGTATCGATATGCTGATAACAGAAAGAAAATTGTTGGGTTTTGTGCTTATGTTATACGTAGCTCTTTAGCTAAACTCTACGCTGCTAGGTATCGACTAAAATCTCGAGCCAAGGTGTATAGGATCGCGTCGCGGAATTTAAGCCGTCCATTGATTGAGAGCAGTAATAATGCAGCACCCGAGTATTCTGATCTTCTGAGAATGGGACTTGTGGATGCAATTGAAGGTGTGCAGTTTTCTCGCATGTCTATGATTCCCTCTTGTGATTACACTCCCCTCCCTCGGAATTGGGTCCCAGATCACGAGAACATATTGCGAGAGTACATCAAGTTACAAGATCCAGGGCTATACTCTGAATTGCATAGCTTAGTCAAGAGACAGGGGTTGAGTTTGCCTCAAGATGAGATATCTGAAATTGTATGGGGATATAAGATCCTTGGTGCCTGTCACTTTAAGACTAATGTAGGAAACGAAATGGAAGGCGGTTGA

mRNA sequence

ATGGCTGATTGGTATCGATATGCTGATAACAGAAAGAAAATTGTTGGGTTTTGTGCTTATGTTATACGTAGCTCTTTAGCTAAACTCTACGCTGCTAGGTATCGACTAAAATCTCGAGCCAAGGTGTATAGGATCGCGTCGCGGAATTTAAGCCGTCCATTGATTGAGAGCAGTAATAATGCAGCACCCGAGTATTCTGATCTTCTGAGAATGGGACTTGTGGATGCAATTGAAGGTGTGCAGTTTTCTCGCATGTCTATGATTCCCTCTTGTGATTACACTCCCCTCCCTCGGAATTGGGTCCCAGATCACGAGAACATATTGCGAGAGTACATCAAGTTACAAGATCCAGGGCTATACTCTGAATTGCATAGCTTAGTCAAGAGACAGGGGTTGAGTTTGCCTCAAGATGAGATATCTGAAATTGTATGGGGATATAAGATCCTTGGTGCCTGTCACTTTAAGACTAATGTAGGAAACGAAATGGAAGGCGGTTGA

Coding sequence (CDS)

ATGGCTGATTGGTATCGATATGCTGATAACAGAAAGAAAATTGTTGGGTTTTGTGCTTATGTTATACGTAGCTCTTTAGCTAAACTCTACGCTGCTAGGTATCGACTAAAATCTCGAGCCAAGGTGTATAGGATCGCGTCGCGGAATTTAAGCCGTCCATTGATTGAGAGCAGTAATAATGCAGCACCCGAGTATTCTGATCTTCTGAGAATGGGACTTGTGGATGCAATTGAAGGTGTGCAGTTTTCTCGCATGTCTATGATTCCCTCTTGTGATTACACTCCCCTCCCTCGGAATTGGGTCCCAGATCACGAGAACATATTGCGAGAGTACATCAAGTTACAAGATCCAGGGCTATACTCTGAATTGCATAGCTTAGTCAAGAGACAGGGGTTGAGTTTGCCTCAAGATGAGATATCTGAAATTGTATGGGGATATAAGATCCTTGGTGCCTGTCACTTTAAGACTAATGTAGGAAACGAAATGGAAGGCGGTTGA

Protein sequence

MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNNAAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLYSELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG

Homology

[Close]

BLAST of Cla019589 vs. Swiss-Prot
Match: YMF11_MARPO (Uncharacterized mitochondrial protein ymf11 OS=Marchantia polymorpha GN=YMF11 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.6e-07
Identity = 33/112 (29.46%), Postives = 58/112 (51.79%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           +A++Y  A+++++ V   +Y++R+SLAK YAA+++L + AKV+    R+LS+P I++   
Sbjct: 599 LANYYHLANSKRQCVTRLSYILRTSLAKTYAAKFKLGTAAKVFAKGGRDLSKP-IKAKKA 658

Query: 61  AAPEYSDLL----------RMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVP 103
             P  + +L            G       + ++R   I   D  PL +NW P
Sbjct: 659 RRPLLNRVLGSKTTAHRRRGAGSEGHSPAIPYTRYGQIKLPDTKPLTKNWQP 709

[Close]

BLAST of Cla019589 vs. TrEMBL
Match: A0A0A0LX19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G442340 PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 9.4e-85
Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN
Sbjct: 533 MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 592

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHE ILREYIKLQDPGLY
Sbjct: 593 SAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHEKILREYIKLQDPGLY 652

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
           SELHS+VKR+GLSLPQ+EISEIVW YKILG+ HFKTN GNEMEGG
Sbjct: 653 SELHSVVKRRGLSLPQEEISEIVWSYKILGSWHFKTNEGNEMEGG 697

[Close]

BLAST of Cla019589 vs. TrEMBL
Match: A0A061F4Q7_THECC (Intron maturase, type II family protein OS=Theobroma cacao GN=TCM_024930 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-70
Identity = 130/165 (78.79%), Postives = 144/165 (87.27%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKK+VGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASR+LSRPL ESSNN
Sbjct: 524 MADWYRYADNRKKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRDLSRPLRESSNN 583

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFS MS+IPSCDYTP PRNWVPDHE +L EYI+LQDP  +
Sbjct: 584 SAPEYSDLLRMGLVDAIEGVQFSHMSLIPSCDYTPFPRNWVPDHEQLLHEYIRLQDPKFF 643

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
             LH  +KR+GLSLPQDE+S IVW YK LG   +++N G E + G
Sbjct: 644 CNLHRSIKREGLSLPQDELSGIVWDYKTLGIWRYRSNTGQETKEG 688

[Close]

BLAST of Cla019589 vs. TrEMBL
Match: A0A0L9VEV5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g224400 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 3.2e-69
Identity = 126/163 (77.30%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKK+VGFCAYV+RSSLAKLYAARYRLKSRAKVY IASRNLSRPL ESSNN
Sbjct: 523 MADWYRYADNRKKVVGFCAYVVRSSLAKLYAARYRLKSRAKVYGIASRNLSRPLRESSNN 582

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFS MS+IPSCDYTP PRNW PDHE +L EYIKL++P  +
Sbjct: 583 SAPEYSDLLRMGLVDAIEGVQFSHMSLIPSCDYTPFPRNWTPDHERLLHEYIKLENPKFF 642

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEME 164
            EL   VK++GL+LPQDEIS++VW YK LG C+F++N  N+++
Sbjct: 643 CELLRSVKQKGLNLPQDEISQMVWNYKTLGVCYFRSNEDNKLK 685

[Close]

BLAST of Cla019589 vs. TrEMBL
Match: A0A087HRS3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G307700 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.4e-67
Identity = 125/165 (75.76%), Postives = 143/165 (86.67%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWY+YADNRKK VGFCAYVIRSSLAKLYAARYRLKSRAKVY IASR+LS PL ESSNN
Sbjct: 537 MADWYKYADNRKKAVGFCAYVIRSSLAKLYAARYRLKSRAKVYSIASRDLSHPLSESSNN 596

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFSRMS+IPSCDYTP PRNW+P+HE +L+EYI+LQDP ++
Sbjct: 597 SAPEYSDLLRMGLVDAIEGVQFSRMSLIPSCDYTPFPRNWIPNHEQVLQEYIRLQDPKVF 656

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
            ELH  +KR+GL+LPQDEISE+VW +K +GA   K     E + G
Sbjct: 657 CELHRSIKREGLTLPQDEISEVVWDFKTVGAWRSKHESKREADDG 701

[Close]

BLAST of Cla019589 vs. TrEMBL
Match: A0A0D3CEN1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-67
Identity = 125/165 (75.76%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWY+YADNRKK VGFCAYVIRSSLAKLYAARYRLKSRAKVY IA+R+LSRPL ESS N
Sbjct: 526 MADWYKYADNRKKAVGFCAYVIRSSLAKLYAARYRLKSRAKVYSIATRDLSRPLSESSKN 585

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAI+GVQFSRMS+IPSCDYTP PRNW+P+HE +L+EYIKLQDP  +
Sbjct: 586 SAPEYSDLLRMGLVDAIDGVQFSRMSLIPSCDYTPFPRNWIPNHEQVLQEYIKLQDPKFF 645

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
            ELH  +KR+GL+LPQDEISE+VW +K LGA   K     E + G
Sbjct: 646 CELHRSIKRKGLTLPQDEISEVVWDFKTLGAWRSKCESKREADDG 690

[Close]

BLAST of Cla019589 vs. NCBI nr
Match: gi|659068412|ref|XP_008444296.1| (PREDICTED: uncharacterized mitochondrial protein ymf11 [Cucumis melo])

HSP 1 Score: 321.6 bits (823), Expect = 7.9e-85
Identity = 157/165 (95.15%), Postives = 162/165 (98.18%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN
Sbjct: 533 MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 592

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVP HENILREYIKLQ+PGLY
Sbjct: 593 SAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPYHENILREYIKLQNPGLY 652

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
           SELHS+VKRQGLSLPQ+EISEIVW YKILG+ HFKTNVGNEMEGG
Sbjct: 653 SELHSVVKRQGLSLPQEEISEIVWSYKILGSWHFKTNVGNEMEGG 697

[Close]

BLAST of Cla019589 vs. NCBI nr
Match: gi|778660963|ref|XP_011657261.1| (PREDICTED: uncharacterized mitochondrial protein ymf11 [Cucumis sativus])

HSP 1 Score: 320.9 bits (821), Expect = 1.3e-84
Identity = 156/165 (94.55%), Postives = 161/165 (97.58%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN
Sbjct: 533 MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 592

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHE ILREYIKLQDPGLY
Sbjct: 593 SAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHEKILREYIKLQDPGLY 652

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
           SELHS+VKR+GLSLPQ+EISEIVW YKILG+ HFKTN GNEMEGG
Sbjct: 653 SELHSVVKRRGLSLPQEEISEIVWSYKILGSWHFKTNEGNEMEGG 697

[Close]

BLAST of Cla019589 vs. NCBI nr
Match: gi|823199720|ref|XP_012435002.1| (PREDICTED: uncharacterized mitochondrial protein ymf11 [Gossypium raimondii])

HSP 1 Score: 275.8 bits (704), Expect = 5.0e-71
Identity = 130/165 (78.79%), Postives = 145/165 (87.88%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKK+VGFCAYVIRSSLAKLYAARYRLKSRAKVY+IASR+LSRPL ESSNN
Sbjct: 546 MADWYRYADNRKKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYKIASRDLSRPLRESSNN 605

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFS MS+IPSCDYTP PRNW+PDHE +L EYIKLQDP  +
Sbjct: 606 SAPEYSDLLRMGLVDAIEGVQFSHMSLIPSCDYTPFPRNWIPDHEQLLHEYIKLQDPKFF 665

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
             LH  +KR+GLSLPQDEIS+IVW YK LG   +++N G E + G
Sbjct: 666 CNLHKAIKREGLSLPQDEISDIVWDYKTLGIWRYRSNSGKETKEG 710

[Close]

BLAST of Cla019589 vs. NCBI nr
Match: gi|590637058|ref|XP_007029012.1| (Intron maturase, type II family protein [Theobroma cacao])

HSP 1 Score: 273.9 bits (699), Expect = 1.9e-70
Identity = 130/165 (78.79%), Postives = 144/165 (87.27%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKK+VGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASR+LSRPL ESSNN
Sbjct: 524 MADWYRYADNRKKVVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRDLSRPLRESSNN 583

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFS MS+IPSCDYTP PRNWVPDHE +L EYI+LQDP  +
Sbjct: 584 SAPEYSDLLRMGLVDAIEGVQFSHMSLIPSCDYTPFPRNWVPDHEQLLHEYIRLQDPKFF 643

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEMEGG 166
             LH  +KR+GLSLPQDE+S IVW YK LG   +++N G E + G
Sbjct: 644 CNLHRSIKREGLSLPQDELSGIVWDYKTLGIWRYRSNTGQETKEG 688

[Close]

BLAST of Cla019589 vs. NCBI nr
Match: gi|920712336|gb|KOM53585.1| (hypothetical protein LR48_Vigan09g224400 [Vigna angularis])

HSP 1 Score: 269.2 bits (687), Expect = 4.6e-69
Identity = 126/163 (77.30%), Postives = 145/163 (88.96%), Query Frame = 1


Query: 1   MADWYRYADNRKKIVGFCAYVIRSSLAKLYAARYRLKSRAKVYRIASRNLSRPLIESSNN 60
           MADWYRYADNRKK+VGFCAYV+RSSLAKLYAARYRLKSRAKVY IASRNLSRPL ESSNN
Sbjct: 523 MADWYRYADNRKKVVGFCAYVVRSSLAKLYAARYRLKSRAKVYGIASRNLSRPLRESSNN 582

Query: 61  AAPEYSDLLRMGLVDAIEGVQFSRMSMIPSCDYTPLPRNWVPDHENILREYIKLQDPGLY 120
           +APEYSDLLRMGLVDAIEGVQFS MS+IPSCDYTP PRNW PDHE +L EYIKL++P  +
Sbjct: 583 SAPEYSDLLRMGLVDAIEGVQFSHMSLIPSCDYTPFPRNWTPDHERLLHEYIKLENPKFF 642

Query: 121 SELHSLVKRQGLSLPQDEISEIVWGYKILGACHFKTNVGNEME 164
            EL   VK++GL+LPQDEIS++VW YK LG C+F++N  N+++
Sbjct: 643 CELLRSVKQKGLNLPQDEISQMVWNYKTLGVCYFRSNEDNKLK 685

The following BLAST results are available for this feature:

BLAST of Cla019589 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YMF11_MARPO	8.6e-07	29.46	Uncharacterized mitochondrial protein ymf11 OS=Marchantia polymorpha GN=YMF11 PE...	[more]

BLAST of Cla019589 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX19_CUCSA	9.4e-85	94.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G442340 PE=4 SV=1	[more]
A0A061F4Q7_THECC	1.3e-70	78.79	Intron maturase, type II family protein OS=Theobroma cacao GN=TCM_024930 PE=4 SV...	[more]
A0A0L9VEV5_PHAAN	3.2e-69	77.30	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g224400 PE=4 SV=1	[more]
A0A087HRS3_ARAAL	1.4e-67	75.76	Uncharacterized protein OS=Arabis alpina GN=AALP_AA1G307700 PE=4 SV=1	[more]
A0A0D3CEN1_BRAOL	2.3e-67	75.76	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of Cla019589 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659068412\|ref\|XP_008444296.1\|	7.9e-85	95.15	PREDICTED: uncharacterized mitochondrial protein ymf11 [Cucumis melo]	[more]
gi\|778660963\|ref\|XP_011657261.1\|	1.3e-84	94.55	PREDICTED: uncharacterized mitochondrial protein ymf11 [Cucumis sativus]	[more]
gi\|823199720\|ref\|XP_012435002.1\|	5.0e-71	78.79	PREDICTED: uncharacterized mitochondrial protein ymf11 [Gossypium raimondii]	[more]
gi\|590637058\|ref\|XP_007029012.1\|	1.9e-70	78.79	Intron maturase, type II family protein [Theobroma cacao]	[more]
gi\|920712336\|gb\|KOM53585.1\|	4.6e-69	77.30	hypothetical protein LR48_Vigan09g224400 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR024937	Domain_X

Vocabulary: **Biological Process**
Term	Definition
GO:0006397	mRNA processing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000374	Group III intron splicing
biological_process	GO:0040007	growth
biological_process	GO:0006397	mRNA processing
biological_process	GO:0009845	seed germination
biological_process	GO:0010228	vegetative to reproductive phase transition of meristem
biological_process	GO:0000373	Group II intron splicing
biological_process	GO:0090615	mitochondrial mRNA processing
biological_process	GO:0007005	mitochondrion organization
biological_process	GO:0006521	regulation of cellular amino acid metabolic process
biological_process	GO:2001006	regulation of cellulose biosynthetic process
biological_process	GO:0010896	regulation of triglyceride catabolic process
biological_process	GO:0032885	regulation of polysaccharide biosynthetic process
biological_process	GO:0090351	seedling development
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU46741	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019589	Cla019589.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU46741	WMU46741	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024937	Domain X	PFAM	PF01348	Intron_maturas2	coord: 3..47 score: 1.
None	No IPR available	PANTHER	PTHR34047	FAMILY NOT NAMED	coord: 1..151 score: 7.5E
None	No IPR available	PANTHER	PTHR34047:SF2	PROTEIN NUCLEAR MATURASE 1	coord: 1..151 score: 7.5E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019589	Cla97C03G058140	Watermelon (97103) v2	wmwmbB124
Cla019589	Csa1G442340	Cucumber (Chinese Long) v2	cuwmB009
Cla019589	MELO3C002733	Melon (DHL92) v3.5.1	mewmB147
Cla019589	ClCG03G006880	Watermelon (Charleston Gray)	wcgwmB223
Cla019589	CSPI01G21220	Wild cucumber (PI 183967)	cpiwmB011
Cla019589	Cucsa.212200	Cucumber (Gy14) v1	cgywmB408
Cla019589	CmaCh13G005370	Cucurbita maxima (Rimu)	cmawmB186
Cla019589	CmoCh13G005680	Cucurbita moschata (Rifu)	cmowmB174
Cla019589	Lsi02G008860	Bottle gourd (USVL1VR-Ls)	lsiwmB188
Cla019589	Cp4.1LG20g05210	Cucurbita pepo (Zucchini)	cpewmB508
Cla019589	CsGy1G020910	Cucumber (Gy14) v2	cgybwmB011
Cla019589	MELO3C002733.2	Melon (DHL92) v3.6.1	medwmB144
Cla019589	Carg19937	Silver-seed gourd	carwmB0797
Cla019589	CsaV3_1G032460	Cucumber (Chinese Long) v3	cucwmB014
Cla019589	Bhi08G001700	Wax gourd	wgowmB472

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019589	Bottle gourd (USVL1VR-Ls)	lsiwmB136
Cla019589	Cucumber (Gy14) v2	cgybwmB451
Cla019589	Melon (DHL92) v3.6.1	medwmB549
Cla019589	Silver-seed gourd	carwmB0291
Cla019589	Silver-seed gourd	carwmB0419
Cla019589	Silver-seed gourd	carwmB0729
Cla019589	Cucumber (Chinese Long) v3	cucwmB506
Cla019589	Watermelon (97103) v2	wmwmbB113
Cla019589	Wax gourd	wgowmB421
Cla019589	Watermelon (97103) v1	wmwmB084
Cla019589	Cucumber (Gy14) v1	cgywmB022
Cla019589	Cucurbita maxima (Rimu)	cmawmB370
Cla019589	Cucurbita maxima (Rimu)	cmawmB622
Cla019589	Cucurbita maxima (Rimu)	cmawmB819
Cla019589	Cucurbita moschata (Rifu)	cmowmB362
Cla019589	Cucurbita moschata (Rifu)	cmowmB613
Cla019589	Cucurbita moschata (Rifu)	cmowmB809
Cla019589	Melon (DHL92) v3.5.1	mewmB562
Cla019589	Watermelon (Charleston Gray)	wcgwmB125
Cla019589	Cucumber (Chinese Long) v2	cuwmB480
Cla019589	Cucurbita pepo (Zucchini)	cpewmB024
Cla019589	Cucurbita pepo (Zucchini)	cpewmB069
Cla019589	Cucurbita pepo (Zucchini)	cpewmB478