Cla019380 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019380
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	ATP synthase gamma chain (AHRD V1 **** E5GC53_CUCME); contains Interpro domain(s) IPR000131 ATPase, F1 complex, gamma subunit
Location	Chr3 : 4722192 .. 4723322 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTGTTCAAATCTGACTATGTGGGTGTCTTCAAAACCCACCGTTTCTGATGCATCCTCCCTTTCTTTCCGCTCATTTTTGAGCCCTTTTCAGCTTCCTTCCCAGAATTCGAGCTCAACTTACCCTGGCCGATCATGCTCAGTTTCTCCAATCCACTGTGGTCTTCGGGAGCTTCGAGACCGTATCGATTCGGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTTGTAAATGGAAGACCCTTCTCAGAAGCTTTGGTTGAGGTTCTTTACAACATCAATGAGCAACTTCAAACAGAAGATGTCGATGTTCCTTTAACCAAAGTAAGACCTGTTAAGAAAGTTGCATTAGTTGTTGTCACTGGTGACCGAGGTCTTTGCGGTGGTTTCAACAACAGTATCATTAAGAAAGCTGAAGCTAGAATATCGGAATTGAAGGCACTTGGTCTTGATTACACTGTCATTAGCGTTGGTAAGAAGGGTAATTCCTATTTCCTTCGCCGGCCTTACATTCCAGTTGATAAGTTCCTTGAAGGTGGCACTCTTCCCACAGCTAAAGAAGCTCAAGCAATAGCTGATGATGTTTTCTCACTCTTTGTTAGTGAGGAAGTTGATAAAGTAGAGCTTTTGTACACCAAATTTGTGTCTTTGGTAAAATCTGATCCTGTTATTCACACTCTTCTTCCTCTCTCACCCAAGGGTGAGATCTGTGATATAAATGGAGTCTGTGTAGATGCTGCAGAAGATGAGTTTTTCAGGTTGACAACAAAGGAAGGGAAATTGACAGTTGAAAGGGATTCAGTGAGGACAAGCACATCAGATTTCTCCCCAATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGGCATTGCAAGAGTCACTGGCCAGTGAACTTGCAGCTAGAATGAGTGCTATGAGTAATGCAACTGATAATGCTTCTGAGCTGAAGAGAACTCTGTCTATTGTTTACAATAGACAGCGCCAAGCTAAGATTACTGGAGAAATCTTGGAGATTGTTGCTGGTGCTAATGCCTTGACTTAA

mRNA sequence

ATGTCTTGTTCAAATCTGACTATGTGGGTGTCTTCAAAACCCACCGTTTCTGATGCATCCTCCCTTTCTTTCCGCTCATTTTTGAGCCCTTTTCAGCTTCCTTCCCAGAATTCGAGCTCAACTTACCCTGGCCGATCATGCTCAGTTTCTCCAATCCACTGTGGTCTTCGGGAGCTTCGAGACCGTATCGATTCGGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTTGTAAATGGAAGACCCTTCTCAGAAGCTTTGGTTGAGGTTCTTTACAACATCAATGAGCAACTTCAAACAGAAGATGTCGATGTTCCTTTAACCAAAGTAAGACCTGTTAAGAAAGTTGCATTAGTTGTTGTCACTGGTGACCGAGGTCTTTGCGGTGGTTTCAACAACAGTATCATTAAGAAAGCTGAAGCTAGAATATCGGAATTGAAGGCACTTGGTCTTGATTACACTGTCATTAGCGTTGGTAAGAAGGGTAATTCCTATTTCCTTCGCCGGCCTTACATTCCAGTTGATAAGTTCCTTGAAGGTGGCACTCTTCCCACAGCTAAAGAAGCTCAAGCAATAGCTGATGATGTTTTCTCACTCTTTGTTAGTGAGGAAGTTGATAAAGTAGAGCTTTTGTACACCAAATTTGTGTCTTTGGTAAAATCTGATCCTGTTATTCACACTCTTCTTCCTCTCTCACCCAAGGGTGAGATCTGTGATATAAATGGAGTCTGTGTAGATGCTGCAGAAGATGAGTTTTTCAGGTTGACAACAAAGGAAGGGAAATTGACAGTTGAAAGGGATTCAGTGAGGACAAGCACATCAGATTTCTCCCCAATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGGCATTGCAAGAGTCACTGGCCAGTGAACTTGCAGCTAGAATGAGTGCTATGAGTAATGCAACTGATAATGCTTCTGAGCTGAAGAGAACTCTGTCTATTGTTTACAATAGACAGCGCCAAGCTAAGATTACTGGAGAAATCTTGGAGATTGTTGCTGGTGCTAATGCCTTGACTTAA

Coding sequence (CDS)

ATGTCTTGTTCAAATCTGACTATGTGGGTGTCTTCAAAACCCACCGTTTCTGATGCATCCTCCCTTTCTTTCCGCTCATTTTTGAGCCCTTTTCAGCTTCCTTCCCAGAATTCGAGCTCAACTTACCCTGGCCGATCATGCTCAGTTTCTCCAATCCACTGTGGTCTTCGGGAGCTTCGAGACCGTATCGATTCGGTGAAGAACACCCAGAAGATCACTGAAGCTATGAAGCTTGTTGCTGCTGCCAAAGTCCGCAGAGCTCAAGAAGCTGTTGTAAATGGAAGACCCTTCTCAGAAGCTTTGGTTGAGGTTCTTTACAACATCAATGAGCAACTTCAAACAGAAGATGTCGATGTTCCTTTAACCAAAGTAAGACCTGTTAAGAAAGTTGCATTAGTTGTTGTCACTGGTGACCGAGGTCTTTGCGGTGGTTTCAACAACAGTATCATTAAGAAAGCTGAAGCTAGAATATCGGAATTGAAGGCACTTGGTCTTGATTACACTGTCATTAGCGTTGGTAAGAAGGGTAATTCCTATTTCCTTCGCCGGCCTTACATTCCAGTTGATAAGTTCCTTGAAGGTGGCACTCTTCCCACAGCTAAAGAAGCTCAAGCAATAGCTGATGATGTTTTCTCACTCTTTGTTAGTGAGGAAGTTGATAAAGTAGAGCTTTTGTACACCAAATTTGTGTCTTTGGTAAAATCTGATCCTGTTATTCACACTCTTCTTCCTCTCTCACCCAAGGGTGAGATCTGTGATATAAATGGAGTCTGTGTAGATGCTGCAGAAGATGAGTTTTTCAGGTTGACAACAAAGGAAGGGAAATTGACAGTTGAAAGGGATTCAGTGAGGACAAGCACATCAGATTTCTCCCCAATTTTGGAGTTTGAGCAAGACCCAGTTCAGATCTTGGATGCTTTATTGCCTCTGTATTTGAACAGCCAGATTTTGAGGGCATTGCAAGAGTCACTGGCCAGTGAACTTGCAGCTAGAATGAGTGCTATGAGTAATGCAACTGATAATGCTTCTGAGCTGAAGAGAACTCTGTCTATTGTTTACAATAGACAGCGCCAAGCTAAGATTACTGGAGAAATCTTGGAGATTGTTGCTGGTGCTAATGCCTTGACTTAA

Protein sequence

MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAKITGEILEIVAGANALT

Homology

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BLAST of Cla019380 vs. Swiss-Prot
Match: ATPG_TOBAC (ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.6e-181
Identity = 327/376 (86.97%), Postives = 353/376 (93.88%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSS-TYPGRSCSVSPIHCGLREL 60
           MSCSNLTM VSSKP++SD+S+LSFRS +SPFQLP+ N+S  + P RS SV+P+HCGLR+L
Sbjct: 1   MSCSNLTMLVSSKPSLSDSSALSFRSSVSPFQLPNHNTSGPSNPSRSSSVTPVHCGLRDL 60

Query: 61  RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDV 120
           RDRI+SVKNTQKITEAMKLVAAAKVRRAQEAVV  RPFSE LVEVLYNINEQLQT+D+DV
Sbjct: 61  RDRIESVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDV 120

Query: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSY 180
           PLTKVRPVKKVALVVVTGDRGLCGGFNN +IKKAEARI +LKALG+DYT+ISVGKKGNSY
Sbjct: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNYLIKKAEARIRDLKALGIDYTIISVGKKGNSY 180

Query: 181 FLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVI 240
           F+RRPYIPVDKFLEG  LPTAK+AQAIADDVFSLFVSEEVDKVELLYTKFVSLVKS+PVI
Sbjct: 181 FIRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVI 240

Query: 241 HTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQD 300
           HTLLPLSPKGEICDING CVDAA DEFFRLTTKEGKLTVERD +RT T+DFSPIL+FEQD
Sbjct: 241 HTLLPLSPKGEICDINGNCVDAANDEFFRLTTKEGKLTVERDIIRTKTTDFSPILQFEQD 300

Query: 301 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQA 360
           PVQILDALLPLYLNSQILRALQESLASELAARMSAMS+ATDNA+ELK+ LS VYNRQRQA
Sbjct: 301 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNATELKKNLSRVYNRQRQA 360

Query: 361 KITGEILEIVAGANAL 376
           KITGEILEIVAGA+AL
Sbjct: 361 KITGEILEIVAGADAL 376

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BLAST of Cla019380 vs. Swiss-Prot
Match: ATPG1_ARATH (ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 7.6e-176
Identity = 326/376 (86.70%), Postives = 349/376 (92.82%), Query Frame = 1


Query: 1   MSCSNLT-MWVSSKPTVS-DASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRE 60
           M+CSNLT MWVSSKP++S D+SSLSFRS L   + P+  SS   P R+ SVSP+   LRE
Sbjct: 1   MACSNLTTMWVSSKPSLSADSSSLSFRSVL---KCPTNTSSP--PSRASSVSPLQASLRE 60

Query: 61  LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVD 120
           LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE LVEVLYNINEQLQT+DVD
Sbjct: 61  LRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTDDVD 120

Query: 121 VPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNS 180
           VPLTKVRPVKKVALVVVTGDRGLCGGFNN IIKKAEARI ELK LGL+YTVISVGKKGNS
Sbjct: 121 VPLTKVRPVKKVALVVVTGDRGLCGGFNNFIIKKAEARIKELKGLGLEYTVISVGKKGNS 180

Query: 181 YFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPV 240
           YFLRRPYIPVDK+LE GTLPTAKEAQA+ADDVFSLF+SEEVDKVELLYTKFVSLVKS+PV
Sbjct: 181 YFLRRPYIPVDKYLEAGTLPTAKEAQAVADDVFSLFISEEVDKVELLYTKFVSLVKSEPV 240

Query: 241 IHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQ 300
           IHTLLPLSPKGEICDING CVDAAEDEFFRLTTKEGKLTVER++ RT T+DFSPIL+FEQ
Sbjct: 241 IHTLLPLSPKGEICDINGTCVDAAEDEFFRLTTKEGKLTVERETFRTPTADFSPILQFEQ 300

Query: 301 DPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQ 360
           DPVQILDALLPLYLNSQILRALQESLASELAARMSAMS+A+DNAS+LK++LS+VYNR+RQ
Sbjct: 301 DPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSASDNASDLKKSLSMVYNRKRQ 360

Query: 361 AKITGEILEIVAGANA 375
           AKITGEILEIVAGANA
Sbjct: 361 AKITGEILEIVAGANA 371

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BLAST of Cla019380 vs. Swiss-Prot
Match: ATPG_PEA (ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 2.4e-169
Identity = 311/372 (83.60%), Postives = 339/372 (91.13%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTY-PGRSCSVSPIHCGLREL 60
           MSCSN+TM VSSKP++ DAS+LSFRS  +PFQLPSQNSSS+  P R  S   I CGL++L
Sbjct: 1   MSCSNVTMLVSSKPSLPDASNLSFRSAFNPFQLPSQNSSSSCTPSRPTS---IQCGLKDL 60

Query: 61  RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDV 120
           ++RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE LVEVLY+INEQLQT+D++ 
Sbjct: 61  KNRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYSINEQLQTDDIES 120

Query: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSY 180
           PLTK+RPVKKVALVV TGDRGLCGGFNN+I+KKAEARI+ELK LGL+YTV+SVG+KGNSY
Sbjct: 121 PLTKLRPVKKVALVVCTGDRGLCGGFNNAILKKAEARIAELKELGLEYTVVSVGRKGNSY 180

Query: 181 FLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVI 240
           F RRPYIPVD+FLEGG+LPTAKEAQ IADDVFSLFVSEEVDKVELLYTKFVSLVKS+P+I
Sbjct: 181 FNRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSNPII 240

Query: 241 HTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQD 300
           HTLLPLSPKGEICDING CVDAAEDE FRLTTKEGKLTVERD +R+ T DFSPIL+FEQD
Sbjct: 241 HTLLPLSPKGEICDINGNCVDAAEDELFRLTTKEGKLTVERDVIRSKTVDFSPILQFEQD 300

Query: 301 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQA 360
           PVQILDALLPLYLNSQILR LQESLASELAARMSAMS+A DNASELK  L+ VYNR  QA
Sbjct: 301 PVQILDALLPLYLNSQILRPLQESLASELAARMSAMSSAFDNASELKTDLTRVYNRATQA 360

Query: 361 KITGEILEIVAG 372
           KITGEILEIVAG
Sbjct: 361 KITGEILEIVAG 369

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BLAST of Cla019380 vs. Swiss-Prot
Match: ATPG_SPIOL (ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2)

HSP 1 Score: 565.5 bits (1456), Expect = 4.5e-160
Identity = 295/361 (81.72%), Postives = 320/361 (88.64%), Query Frame = 1


Query: 19  ASSLSFRSFLSPFQLPSQNSSSTYPGRSCSV----SPIHCG-LRELRDRIDSVKNTQKIT 78
           A SLSF S +S F LP+   S+  P  + +     +PI C  LRELRDRI SVKNTQKIT
Sbjct: 2   ACSLSFSSSVSTFHLPTTTQSTQAPPNNATTLPTTNPIQCANLRELRDRIGSVKNTQKIT 61

Query: 79  EAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPVKKVALV 138
           EAMKLVAAAKVRRAQEAVVNGRPFSE LVEVLYN+NEQLQTEDVDVPLTK+R VKKVAL+
Sbjct: 62  EAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNMNEQLQTEDVDVPLTKIRTVKKVALM 121

Query: 139 VVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIPVDKFLE 198
           VVTGDRGLCGGFNN ++KKAE+RI+ELK LG+DYT+IS+GKKGN+YF+RRP IPVD++ +
Sbjct: 122 VVTGDRGLCGGFNNMLLKKAESRIAELKKLGVDYTIISIGKKGNTYFIRRPEIPVDRYFD 181

Query: 199 GGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPKGEICD 258
           G  LPTAKEAQAIADDVFSLFVSEEVDKVE+LYTKFVSLVKSDPVIHTLLPLSPKGEICD
Sbjct: 182 GTNLPTAKEAQAIADDVFSLFVSEEVDKVEMLYTKFVSLVKSDPVIHTLLPLSPKGEICD 241

Query: 259 INGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDALLPLYLN 318
           ING CVDAAEDE FRLTTKEGKLTVERD ++T T  FSPILEFEQDP QILDALLPLYLN
Sbjct: 242 INGKCVDAAEDELFRLTTKEGKLTVERDMIKTETPAFSPILEFEQDPAQILDALLPLYLN 301

Query: 319 SQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAKITGEILEIVAGAN 375
           SQILRALQESLASELAARM+AMSNATDNA+ELK+TLSI YNR RQAKITGEILEIVAGAN
Sbjct: 302 SQILRALQESLASELAARMTAMSNATDNANELKKTLSINYNRARQAKITGEILEIVAGAN 361

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BLAST of Cla019380 vs. Swiss-Prot
Match: ATPG_MAIZE (ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 1.6e-146
Identity = 272/375 (72.53%), Postives = 313/375 (83.47%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCS+L+   SS    S AS+   RS                P RS  +  + C LRELR
Sbjct: 1   MSCSHLSTAWSSSALASSASTTRRRS----------------PPRSGLL--VRCSLRELR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
            RIDSV+NTQKITEAMKLVAAAKVRRAQEAVV+ RPFSEALVEVLYN+N+++QTED+D+P
Sbjct: 61  TRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDIDLP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LT+ RPVKKVALVV+TG+RGLCG FNN+++KKAE RI ELK LGL YTV+SVGKKGN+YF
Sbjct: 121 LTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGKKGNAYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
            RRPYIP+++ LE  ++PT K++QAI D V+SLFVSEEVDKVELLY+KFVSLV+SDP+I 
Sbjct: 181 QRRPYIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQ 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLP+SPKGEICD+NGVCVDA EDE FRLTTKEGKLTVER+ V+  T  FSP+++FEQDP
Sbjct: 241 TLLPMSPKGEICDVNGVCVDATEDELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQILRALQESLASELAARMSAMS+ATDNA EL++ LSI YNRQRQAK
Sbjct: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAK 357

Query: 361 ITGEILEIVAGANAL 376
           ITGEILEIVAGA+AL
Sbjct: 361 ITGEILEIVAGADAL 357

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BLAST of Cla019380 vs. TrEMBL
Match: B9RXK8_RICCO (ATP synthase gamma chain 2, chloroplast, putative OS=Ricinus communis GN=RCOM_0904560 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 4.9e-182
Identity = 332/375 (88.53%), Postives = 353/375 (94.13%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCSNLTMWVSSKP++SD SSLSF S L+PFQLP+ +S S  P RS S +PIHC LR+LR
Sbjct: 1   MSCSNLTMWVSSKPSLSDTSSLSFCSSLNPFQLPTHSSGSNSPSRSSSATPIHCNLRDLR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
            RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE LVEVLYNINEQLQTED+DVP
Sbjct: 61  TRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDIDVP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LTK RPVKKVALVVVTGDRGLCGGFNN+IIKKAE+RI+ELK LG+DYT+ISVGKKGNSYF
Sbjct: 121 LTKNRPVKKVALVVVTGDRGLCGGFNNNIIKKAESRIAELKDLGVDYTIISVGKKGNSYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
           +RRPYIPVD+FLEG  LPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH
Sbjct: 181 IRRPYIPVDRFLEGTNLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLPLSP+GEICDING CVDAAEDEFFRLTTKEGKLTVERD VRT T DFSPIL+FEQDP
Sbjct: 241 TLLPLSPEGEICDINGNCVDAAEDEFFRLTTKEGKLTVERDVVRTQTVDFSPILQFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQIL+ALQESLASELAARMSAMSNA+DNA+ELK+TLSIVYNR RQAK
Sbjct: 301 VQILDALLPLYLNSQILKALQESLASELAARMSAMSNASDNAAELKKTLSIVYNRARQAK 360

Query: 361 ITGEILEIVAGANAL 376
           ITGEILEIVAGANAL
Sbjct: 361 ITGEILEIVAGANAL 375

[Close]

BLAST of Cla019380 vs. TrEMBL
Match: A0A068U9W5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017780001 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 2.7e-180
Identity = 324/376 (86.17%), Postives = 358/376 (95.21%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCSNLTMWVSSK ++SD+++LSFRS ++P QLPS NS++  P R  SV+PIHCGLRELR
Sbjct: 1   MSCSNLTMWVSSKTSLSDSTALSFRSSITPVQLPSNNSTTANPSRPSSVTPIHCGLRELR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
           DRI +VKNTQKITEAMKLVAAAKVRRAQEAVVN RPFSE+LVEVLYNINEQLQT+D+DVP
Sbjct: 61  DRIVTVKNTQKITEAMKLVAAAKVRRAQEAVVNARPFSESLVEVLYNINEQLQTDDIDVP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LTKVRPVKKV LVVVTGDRGLCGGFNN+IIKKAEARI+ELK LGLDYT+ISVGKKGNSYF
Sbjct: 121 LTKVRPVKKVGLVVVTGDRGLCGGFNNAIIKKAEARIAELKGLGLDYTIISVGKKGNSYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
           +RRPYIPVD+FL+G +LPTAKEAQAIADDVFSLF+SEEVDKVELLYTKFVSLVK++PVIH
Sbjct: 181 IRRPYIPVDRFLDGTSLPTAKEAQAIADDVFSLFISEEVDKVELLYTKFVSLVKAEPVIH 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLPLSPKGEICDING CVDAAEDEFFRLTTKEGKLTVERD +RT T++FS IL+FEQDP
Sbjct: 241 TLLPLSPKGEICDINGNCVDAAEDEFFRLTTKEGKLTVERDIMRTKTTEFSAILQFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQILR+LQESLASELAARM+AMSNATDNA+ELK++LSIVYNR+RQAK
Sbjct: 301 VQILDALLPLYLNSQILRSLQESLASELAARMTAMSNATDNANELKKSLSIVYNRERQAK 360

Query: 361 ITGEILEIVAGANALT 377
           ITGEILEIVAGANALT
Sbjct: 361 ITGEILEIVAGANALT 376

[Close]

BLAST of Cla019380 vs. TrEMBL
Match: A0A067JAD8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21217 PE=3 SV=1)

HSP 1 Score: 636.7 bits (1641), Expect = 1.8e-179
Identity = 328/368 (89.13%), Postives = 350/368 (95.11%), Query Frame = 1


Query: 8   MWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELRDRIDSVK 67
           MWVSSKP++SD SSL+FRS L+PFQLPSQ+S+++ P RS + + IHCGLRELR RIDSVK
Sbjct: 1   MWVSSKPSLSDTSSLAFRSSLNPFQLPSQSSATSNPSRSSAATQIHCGLRELRTRIDSVK 60

Query: 68  NTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVPLTKVRPV 127
           NTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE LVEVLYNINEQLQTED+D PLTKVRPV
Sbjct: 61  NTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTEDIDAPLTKVRPV 120

Query: 128 KKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYFLRRPYIP 187
           KKVALVV TGDRGLCGGFNN+IIKKAEARI+ELK LGL+YTVISVGKKGNSYFLRRPYIP
Sbjct: 121 KKVALVVCTGDRGLCGGFNNAIIKKAEARIAELKDLGLNYTVISVGKKGNSYFLRRPYIP 180

Query: 188 VDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSP 247
           VD+FLEG +LPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSP
Sbjct: 181 VDRFLEGTSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSP 240

Query: 248 KGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDPVQILDAL 307
           KGEICDING CVDAAEDEFFRLTT+EGKLTVERD VRT T+DFSPIL+FEQDPVQILDAL
Sbjct: 241 KGEICDINGNCVDAAEDEFFRLTTREGKLTVERDVVRTQTADFSPILQFEQDPVQILDAL 300

Query: 308 LPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAKITGEILE 367
           LPLYLNSQIL+ALQESLASELAARMSAMSNATDNASELK+ LS VYNR+RQAKITGEILE
Sbjct: 301 LPLYLNSQILKALQESLASELAARMSAMSNATDNASELKKNLSRVYNRERQAKITGEILE 360

Query: 368 IVAGANAL 376
           IVAGANAL
Sbjct: 361 IVAGANAL 368

[Close]

BLAST of Cla019380 vs. TrEMBL
Match: M1BD50_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016482 PE=3 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 4.3e-178
Identity = 329/376 (87.50%), Postives = 353/376 (93.88%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSS-TYPGRSCSVSPIHCGLREL 60
           MSCSNLTM VSSKP++SD+S+LSFRS +S FQLP+ NSS  + P RS SV P+ CGLR+L
Sbjct: 1   MSCSNLTMLVSSKPSLSDSSALSFRSAVSSFQLPNHNSSGPSNPSRSSSVIPVQCGLRDL 60

Query: 61  RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDV 120
           RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV  RPFSE LVEVLYNINEQLQT+D+DV
Sbjct: 61  RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDV 120

Query: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSY 180
           PLTKVRPVKKVALVVVTGDRGLCGGFNN IIKKAEARI +LKALG+DYT+ISVGKKGNSY
Sbjct: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNYIIKKAEARIRDLKALGIDYTIISVGKKGNSY 180

Query: 181 FLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVI 240
           FLRRPYIPVDKFLEG +LPTAK+AQAIADDVFSLFVSEEVDKVELLYTKFVSLVKS+PVI
Sbjct: 181 FLRRPYIPVDKFLEGSSLPTAKDAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSEPVI 240

Query: 241 HTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQD 300
           HTLLPLSPKGEICDING CVDAAEDEFFRLTTKEGKLTVERD +RT T+DFS IL+FEQD
Sbjct: 241 HTLLPLSPKGEICDINGNCVDAAEDEFFRLTTKEGKLTVERDVMRTKTTDFSAILQFEQD 300

Query: 301 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQA 360
           PVQILDALLPLYLNSQILRALQESLASELA+RMSAMS+ATDNASELK+ LS VYNRQRQA
Sbjct: 301 PVQILDALLPLYLNSQILRALQESLASELASRMSAMSSATDNASELKKNLSRVYNRQRQA 360

Query: 361 KITGEILEIVAGANAL 376
           KITGEILEIVAGA+AL
Sbjct: 361 KITGEILEIVAGADAL 376

[Close]

BLAST of Cla019380 vs. TrEMBL
Match: K4B9S5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 1.1e-176
Identity = 327/376 (86.97%), Postives = 350/376 (93.09%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQN-SSSTYPGRSCSVSPIHCGLREL 60
           MSCSNLTM VSSKP++S++S+LSFRS +S FQLP+ N S  + P RS SV P+ CGLR+L
Sbjct: 1   MSCSNLTMLVSSKPSLSESSALSFRSAVSSFQLPNHNLSGPSNPSRSSSVIPVRCGLRDL 60

Query: 61  RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDV 120
           RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVV  RPFSE LVEVLYNINEQLQT+D+DV
Sbjct: 61  RDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVGARPFSETLVEVLYNINEQLQTDDIDV 120

Query: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSY 180
           PLTKVRPVKKVALVVVTGDRGLCGGFNN IIKKAEARI +LKALGLDYT+ISVGKKGNSY
Sbjct: 121 PLTKVRPVKKVALVVVTGDRGLCGGFNNYIIKKAEARIRDLKALGLDYTIISVGKKGNSY 180

Query: 181 FLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVI 240
           FLRRPYIPVDKFLEG  LPTAK+AQAIADDVFS FVSEEVDKVELLYTKFVSLVKS+PVI
Sbjct: 181 FLRRPYIPVDKFLEGSNLPTAKDAQAIADDVFSFFVSEEVDKVELLYTKFVSLVKSEPVI 240

Query: 241 HTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQD 300
           HTLLPLSPKGEICDING CVDAAEDEFFRLTTKEGKLTVERD +RT T+DFS IL+FEQD
Sbjct: 241 HTLLPLSPKGEICDINGNCVDAAEDEFFRLTTKEGKLTVERDVMRTKTTDFSAILQFEQD 300

Query: 301 PVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQA 360
           PVQILDALLPLYLNSQILRALQESLASELA+RMSAMS+ATDNASELK+ LS VYNRQRQA
Sbjct: 301 PVQILDALLPLYLNSQILRALQESLASELASRMSAMSSATDNASELKKNLSRVYNRQRQA 360

Query: 361 KITGEILEIVAGANAL 376
           KITGEILEIVAGA+AL
Sbjct: 361 KITGEILEIVAGADAL 376

[Close]

BLAST of Cla019380 vs. NCBI nr
Match: gi|659067738|ref|XP_008441056.1| (PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis melo])

HSP 1 Score: 701.8 bits (1810), Expect = 6.4e-199
Identity = 368/376 (97.87%), Postives = 371/376 (98.67%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCSNLTMWV+SKPTVSDASSLSFRSFLSPFQLPSQNS+   P RS SVSPIHCGLRELR
Sbjct: 1   MSCSNLTMWVTSKPTVSDASSLSFRSFLSPFQLPSQNST---PARSWSVSPIHCGLRELR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
           DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP
Sbjct: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LTKVRPVKKVALVVVTGDRGLCGGFNN+IIKKAEARISELKALGLDYTVISVGKKGNSYF
Sbjct: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNTIIKKAEARISELKALGLDYTVISVGKKGNSYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
           LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH
Sbjct: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP
Sbjct: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK
Sbjct: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360

Query: 361 ITGEILEIVAGANALT 377
           ITGEILEIVAGANALT
Sbjct: 361 ITGEILEIVAGANALT 373

[Close]

BLAST of Cla019380 vs. NCBI nr
Match: gi|449454742|ref|XP_004145113.1| (PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis sativus])

HSP 1 Score: 701.4 bits (1809), Expect = 8.3e-199
Identity = 368/376 (97.87%), Postives = 370/376 (98.40%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNS+   P RS SV+PIHCGLRELR
Sbjct: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNST---PARSWSVTPIHCGLRELR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
           DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP
Sbjct: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARI ELKALGLDYTVISVGKKGNSYF
Sbjct: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARIKELKALGLDYTVISVGKKGNSYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
           LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH
Sbjct: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP
Sbjct: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK
Sbjct: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360

Query: 361 ITGEILEIVAGANALT 377
           ITGEILEIVAGANALT
Sbjct: 361 ITGEILEIVAGANALT 373

[Close]

BLAST of Cla019380 vs. NCBI nr
Match: gi|823234611|ref|XP_012449939.1| (PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium raimondii])

HSP 1 Score: 667.5 bits (1721), Expect = 1.3e-188
Identity = 338/375 (90.13%), Postives = 362/375 (96.53%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCSNLTMWVSSKP++SD SSLSFRSF+SPFQLPSQ+S+   P RS SV+P+HCGLRELR
Sbjct: 1   MSCSNLTMWVSSKPSLSDTSSLSFRSFISPFQLPSQSSTPGNPSRSSSVTPVHCGLRELR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
           DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE+LVEVLYNINEQLQTED+D P
Sbjct: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDAP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LT VRPVKKVALVVVTGDRGLCGGFNN+IIKKAEARI+ELK LGLDYT+ISVGKKGNSYF
Sbjct: 121 LTNVRPVKKVALVVVTGDRGLCGGFNNAIIKKAEARIAELKQLGLDYTIISVGKKGNSYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
           +RRPYIPVD+FL+G +LPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH
Sbjct: 181 IRRPYIPVDRFLDGSSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLPLSPKGEICD+NGVCVDAAEDEFFRLTT+EGKLTVER+ +RT T+DFSPIL+FEQDP
Sbjct: 241 TLLPLSPKGEICDVNGVCVDAAEDEFFRLTTREGKLTVEREVMRTQTADFSPILQFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQ+LRALQESLASELAARMSAMSNATDNA ELK+TLSIVYNRQRQAK
Sbjct: 301 VQILDALLPLYLNSQVLRALQESLASELAARMSAMSNATDNAQELKKTLSIVYNRQRQAK 360

Query: 361 ITGEILEIVAGANAL 376
           ITGEILEIVAGANAL
Sbjct: 361 ITGEILEIVAGANAL 375

[Close]

BLAST of Cla019380 vs. NCBI nr
Match: gi|1009108623|ref|XP_015885622.1| (PREDICTED: ATP synthase gamma chain, chloroplastic isoform X2 [Ziziphus jujuba])

HSP 1 Score: 664.5 bits (1713), Expect = 1.1e-187
Identity = 349/380 (91.84%), Postives = 360/380 (94.74%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSS-STYPGRSCS----VSPIHCG 60
           MSCSNLTMWVSSKP++SD+SSLSFRSFLSPFQLPSQNS  S+ P RS S    V+PIHCG
Sbjct: 1   MSCSNLTMWVSSKPSLSDSSSLSFRSFLSPFQLPSQNSPISSNPSRSSSSSSSVTPIHCG 60

Query: 61  LRELRDRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTE 120
           LRELR RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE LVEVLYNINEQLQTE
Sbjct: 61  LRELRGRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSETLVEVLYNINEQLQTE 120

Query: 121 DVDVPLTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKK 180
           D+D PLT VRPVKKVALVVVTGDRGLCGGFNN+IIKKAEARISELK LGLDYTVISVGKK
Sbjct: 121 DIDAPLTNVRPVKKVALVVVTGDRGLCGGFNNAIIKKAEARISELKGLGLDYTVISVGKK 180

Query: 181 GNSYFLRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKS 240
           GNSYFLRRPYIPVDKFLEGG+LPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKS
Sbjct: 181 GNSYFLRRPYIPVDKFLEGGSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKS 240

Query: 241 DPVIHTLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILE 300
           DPVIHTLLPLSPKGEICD+NG CVDAAEDEFFRLTTKEGKLTVER  VRT T DFSPIL+
Sbjct: 241 DPVIHTLLPLSPKGEICDVNGNCVDAAEDEFFRLTTKEGKLTVERGVVRTETVDFSPILQ 300

Query: 301 FEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNR 360
           FEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNA ELK+TLSIVYNR
Sbjct: 301 FEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAMELKKTLSIVYNR 360

Query: 361 QRQAKITGEILEIVAGANAL 376
           QRQAKITGEILEIVAGANAL
Sbjct: 361 QRQAKITGEILEIVAGANAL 380

[Close]

BLAST of Cla019380 vs. NCBI nr
Match: gi|590626142|ref|XP_007026083.1| (ATPase, F1 complex, gamma subunit protein [Theobroma cacao])

HSP 1 Score: 663.3 bits (1710), Expect = 2.5e-187
Identity = 343/375 (91.47%), Postives = 362/375 (96.53%), Query Frame = 1


Query: 1   MSCSNLTMWVSSKPTVSDASSLSFRSFLSPFQLPSQNSSSTYPGRSCSVSPIHCGLRELR 60
           MSCSNLTMWVSSKP++SD SSLSFRSF+SPFQLPSQ SS+  P RS S + IHCGLRELR
Sbjct: 1   MSCSNLTMWVSSKPSLSDTSSLSFRSFISPFQLPSQ-SSAPNPSRSSSATQIHCGLRELR 60

Query: 61  DRIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSEALVEVLYNINEQLQTEDVDVP 120
           +RIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSE+LVEVLYNINEQLQTED+DVP
Sbjct: 61  ERIDSVKNTQKITEAMKLVAAAKVRRAQEAVVNGRPFSESLVEVLYNINEQLQTEDIDVP 120

Query: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNSIIKKAEARISELKALGLDYTVISVGKKGNSYF 180
           LTKVRPVKKVALVVVTGDRGLCGGFNN+IIKKAE+RI+ELK LGLDYTVISVGKKGN+YF
Sbjct: 121 LTKVRPVKKVALVVVTGDRGLCGGFNNNIIKKAESRIAELKELGLDYTVISVGKKGNTYF 180

Query: 181 LRRPYIPVDKFLEGGTLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240
           LRRPYIPVD+FLEG +LPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH
Sbjct: 181 LRRPYIPVDRFLEGTSLPTAKEAQAIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIH 240

Query: 241 TLLPLSPKGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDSVRTSTSDFSPILEFEQDP 300
           TLLPLSP+GEICDINGVCVDAAEDEFFRLTTKEGKLTVERD VRT T+DFSPIL+FEQDP
Sbjct: 241 TLLPLSPRGEICDINGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETADFSPILQFEQDP 300

Query: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNASELKRTLSIVYNRQRQAK 360
           VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNA EL+RTLSIVYNR+RQAK
Sbjct: 301 VQILDALLPLYLNSQILRALQESLASELAARMSAMSNATDNAVELRRTLSIVYNRERQAK 360

Query: 361 ITGEILEIVAGANAL 376
           ITGEILEIVAGANAL
Sbjct: 361 ITGEILEIVAGANAL 374

The following BLAST results are available for this feature:

BLAST of Cla019380 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATPG_TOBAC	1.6e-181	86.97	ATP synthase gamma chain, chloroplastic OS=Nicotiana tabacum GN=ATPC PE=1 SV=1	[more]
ATPG1_ARATH	7.6e-176	86.70	ATP synthase gamma chain 1, chloroplastic OS=Arabidopsis thaliana GN=ATPC1 PE=1 ...	[more]
ATPG_PEA	2.4e-169	83.60	ATP synthase gamma chain, chloroplastic OS=Pisum sativum GN=ATPC PE=2 SV=1	[more]
ATPG_SPIOL	4.5e-160	81.72	ATP synthase gamma chain, chloroplastic OS=Spinacia oleracea GN=ATPC PE=1 SV=2	[more]
ATPG_MAIZE	1.6e-146	72.53	ATP synthase subunit gamma, chloroplastic OS=Zea mays PE=1 SV=1	[more]

BLAST of Cla019380 vs. TrEMBL


Match Name	E-value	Identity	Description
B9RXK8_RICCO	4.9e-182	88.53	ATP synthase gamma chain 2, chloroplast, putative OS=Ricinus communis GN=RCOM_09...	[more]
A0A068U9W5_COFCA	2.7e-180	86.17	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00017780001 PE=3 SV=1	[more]
A0A067JAD8_JATCU	1.8e-179	89.13	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21217 PE=3 SV=1	[more]
M1BD50_SOLTU	4.3e-178	87.50	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016482 PE=3 SV=1	[more]
K4B9S5_SOLLC	1.1e-176	86.97	Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of Cla019380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067738\|ref\|XP_008441056.1\|	6.4e-199	97.87	PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis melo]	[more]
gi\|449454742\|ref\|XP_004145113.1\|	8.3e-199	97.87	PREDICTED: ATP synthase gamma chain, chloroplastic [Cucumis sativus]	[more]
gi\|823234611\|ref\|XP_012449939.1\|	1.3e-188	90.13	PREDICTED: ATP synthase gamma chain, chloroplastic [Gossypium raimondii]	[more]
gi\|1009108623\|ref\|XP_015885622.1\|	1.1e-187	91.84	PREDICTED: ATP synthase gamma chain, chloroplastic isoform X2 [Ziziphus jujuba]	[more]
gi\|590626142\|ref\|XP_007026083.1\|	2.5e-187	91.47	ATPase, F1 complex, gamma subunit protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000131	ATP_synth_F1_gsu
IPR023632	ATP_synth_F1_gsu_CS
IPR023633	ATPase, F1 complex, gamma subunit domain

Vocabulary: **Cellular Component**
Term	Definition
GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)

Vocabulary: **Molecular Function**
Term	Definition
GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
GO:0046961	proton-transporting ATPase activity, rotational mechanism

Vocabulary: **Biological Process**
Term	Definition
GO:0015986	ATP synthesis coupled proton transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0006790	sulfur compound metabolic process
biological_process	GO:0019222	regulation of metabolic process
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:0032787	monocarboxylic acid metabolic process
biological_process	GO:0006732	coenzyme metabolic process
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0044255	cellular lipid metabolic process
biological_process	GO:0071840	cellular component organization or biogenesis
biological_process	GO:0006520	cellular amino acid metabolic process
biological_process	GO:0046394	carboxylic acid biosynthetic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019380	Cla019380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000131	ATPase, F1 complex, gamma subunit	PRINTS	PR00126	ATPASEGAMMA	coord: 127..146 score: 7.6E-40coord: 322..341 score: 7.6E-40coord: 353..374 score: 7.6E-40coord: 220..237 score: 7.6
IPR000131	ATPase, F1 complex, gamma subunit	HAMAP	MF_00815	ATP_synth_gamma_bact	coord: 53..375 score: 32
IPR000131	ATPase, F1 complex, gamma subunit	PANTHER	PTHR11693	ATP SYNTHASE GAMMA CHAIN	coord: 1..376 score: 1.4E
IPR000131	ATPase, F1 complex, gamma subunit	PFAM	PF00231	ATP-synt	coord: 56..375 score: 5.0
IPR000131	ATPase, F1 complex, gamma subunit	TIGRFAMs	TIGR01146	TIGR01146	coord: 55..375 score: 6.8E
IPR023632	ATPase, F1 complex, gamma subunit conserved site	PROSITE	PS00153	ATPASE_GAMMA	coord: 361..374 scor
IPR023633	ATPase, F1 complex, gamma subunit domain	unknown	SSF52943	ATP synthase (F1-ATPase), gamma subunit	coord: 55..252 score: 1.29E-83coord: 292..375 score: 1.29
None	No IPR available	GENE3D	G3DSA:1.10.287.80		coord: 71..112 score: 2.0E-27coord: 290..323 score: 2.0E-27coord: 324..370 score: 3.5
None	No IPR available	GENE3D	G3DSA:3.40.1380.10		coord: 119..246 score: 1.7
None	No IPR available	PANTHER	PTHR11693:SF21	ATP SYNTHASE GAMMA CHAIN 1, CHLOROPLASTIC-RELATED	coord: 1..376 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019380	Cla97C03G055870	Watermelon (97103) v2	wmwmbB124
Cla019380	Cla97C01G021610	Watermelon (97103) v2	wmwmbB111
Cla019380	Csa6G513760	Cucumber (Chinese Long) v2	cuwmB477
Cla019380	Csa1G062930	Cucumber (Chinese Long) v2	cuwmB008
Cla019380	MELO3C007390	Melon (DHL92) v3.5.1	mewmB563
Cla019380	MELO3C002456	Melon (DHL92) v3.5.1	mewmB149
Cla019380	ClCG03G004720	Watermelon (Charleston Gray)	wcgwmB223
Cla019380	ClCG01G021980	Watermelon (Charleston Gray)	wcgwmB124
Cla019380	CSPI06G33580	Wild cucumber (PI 183967)	cpiwmB492
Cla019380	CSPI01G10680	Wild cucumber (PI 183967)	cpiwmB010
Cla019380	Cucsa.045230	Cucumber (Gy14) v1	cgywmB020
Cla019380	Cucsa.085810	Cucumber (Gy14) v1	cgywmB097
Cla019380	CmaCh13G007400	Cucurbita maxima (Rimu)	cmawmB188
Cla019380	CmaCh03G005370	Cucurbita maxima (Rimu)	cmawmB623
Cla019380	CmaCh18G002590	Cucurbita maxima (Rimu)	cmawmB371
Cla019380	CmoCh13G007710	Cucurbita moschata (Rifu)	cmowmB176
Cla019380	CmoCh18G002730	Cucurbita moschata (Rifu)	cmowmB360
Cla019380	Lsi01G004260	Bottle gourd (USVL1VR-Ls)	lsiwmB137
Cla019380	Lsi02G005990	Bottle gourd (USVL1VR-Ls)	lsiwmB184
Cla019380	Cp4.1LG20g03600	Cucurbita pepo (Zucchini)	cpewmB503
Cla019380	CsGy1G010570	Cucumber (Gy14) v2	cgybwmB010
Cla019380	CsGy6G033120	Cucumber (Gy14) v2	cgybwmB448
Cla019380	MELO3C007390.2	Melon (DHL92) v3.6.1	medwmB550
Cla019380	MELO3C002456.2	Melon (DHL92) v3.6.1	medwmB145
Cla019380	Carg07547	Silver-seed gourd	carwmB1004
Cla019380	Carg13697	Silver-seed gourd	carwmB0930
Cla019380	Carg06850	Silver-seed gourd	carwmB0489
Cla019380	CsaV3_6G049050	Cucumber (Chinese Long) v3	cucwmB503
Cla019380	CsaV3_1G010750	Cucumber (Chinese Long) v3	cucwmB013
Cla019380	Bhi03G000442	Wax gourd	wgowmB420
Cla019380	Bhi08G001504	Wax gourd	wgowmB473

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cla019380	Cla014452	Watermelon (97103) v1	wmwmB082

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019380	Melon (DHL92) v3.6.1	medwmB220
Cla019380	Silver-seed gourd	carwmB0641
Cla019380	Silver-seed gourd	carwmB0876
Cla019380	Cucumber (Chinese Long) v3	cucwmB129
Cla019380	Cucumber (Chinese Long) v3	cucwmB609
Cla019380	Watermelon (97103) v1	wmwmB087
Cla019380	Cucumber (Gy14) v1	cgywmB070
Cla019380	Cucumber (Gy14) v1	cgywmB257
Cla019380	Cucurbita maxima (Rimu)	cmawmB820
Cla019380	Cucurbita moschata (Rifu)	cmowmB614
Cla019380	Cucurbita moschata (Rifu)	cmowmB810
Cla019380	Watermelon (Charleston Gray)	wcgwmB183
Cla019380	Cucurbita pepo (Zucchini)	cpewmB025
Cla019380	Cucurbita pepo (Zucchini)	cpewmB070
Cla019380	Cucurbita pepo (Zucchini)	cpewmB477
Cla019380	Cucurbita pepo (Zucchini)	cpewmB553
Cla019380	Bottle gourd (USVL1VR-Ls)	lsiwmB093