Cla019348 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019348
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Ankyrin repeat-containing protein (AHRD V1 ***- Q9FFL9_ARATH); contains Interpro domain(s) IPR002695 AICARFT/IMPCHase bienzyme
Location	Chr3 : 4455391 .. 4457812 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAATCGTCTTCTCTGGCCAATGAAGGAGTAGGAAACTCCGGTCACAGCTCACGCATAGACATTGAATCTGATCCATGCCTAACCACCAAGAGTAAGACTCCTATTTTTAGCTTCGAATTCTTGCCCTACAACAAAGTTTACCATTTTTGTAGAGACAACTTTCGAAAATAACATCTAATTAAGCTTTGATAAATATTTTCTCAAAGGTTAACTCAAACTTTGAACAGTATTGAAATAGATTCTGTCGAAAAAGCTTTTTCAAAAGTTCACTAGAAATTTTTATCTTTTAAAGGTTTATAAGCCAAAATTATTATTATTCAAAACGCTATCATATCATTGTATAAATTTTATAAGTTTAGAAAAAGAGATTTTGGTATAATTGATGCTGTGATATTAATTTTTATACCATCATATTTATGTTTGCTTCAAAACTCTTAAAATTGATTTTCATATATTTAGAAATGATTTCGAATTATTATGTTTGGTTTCAATAGCGATTTAAGAGTTACCCCAAATTACTAAAAAGGTACTTTCAATTGAAAAAATTATTTAAATAAATAATTAATATAAATATTTATTTTTATTAATTTATTTTTTATTTGTTTTATTGTTAAATTTTTTTCATGATTCATATGTTGAGTAACATATGTGTAGAATAAATATTGAAAGAAAACTCAAAACATATATTTCATTCAAGCTTTGACAAGGAATTCACATAAGTATAAAATTTAAAAACCCAATTATCTTTACTTTTCTTTTATTTGTTATTAAATTTTCAAATTATTATAAATTCCAAGTTTTCAAAGATTAATATTCTTTGAGAAATGTAACTTGTTTTTCGAGGTATTTAATAACCTTCGATAAAAATAGATATTTTTGTAAAGGATAATATATTTTTTCAAAAGTTTGAATATTCTTTGAAATTGTAAATCTTTTACAAGGGTGTCTAATAACCTTCGATAAAAGGTTATATTTTTAGAAGGTTTTCAAACAATCTTTGATAAAAGATAATACATTTTTCGAATGTTTTTAAATAACATTTGATAAAAGATAATACATTTCTCTAATGTTAATGTTTTTAATATCCTTTGGAAAATGTAAATTTTTTTTCAAGATTGTTTAATAACCCTTGATAAAGGATGATATATTTTTCAAAGGGATTTATTAACCTTTGACAAATAGATACTTTTTTTAAAGGTCTGTAATAACCTTGTTAAAAATTAGATATTCTTCAAAAGTTTTTTCAACACCTTCGGTGATATATATATATTTGTTATAGGTTTCTAATTACCTTGGTTAAGGACATATTTTTCAAATATATTTTCAATACAACCGATAGATGTATATATTTTTCAAAGATTTTTTTATAACTTTTGATAAAAAATAAATATTGTCAAAATAGACCAGCTTTTCTATATTAATTGATTCATTTTAAAATTTCAAGCTTATCTATATGGTATGATATAGTTTACAAAGTCCAAATCAACATTCAATCAATTAAGAAAAAAAAAAGAGGATTTCATACAAGAATTATGAACTCAAAAAGGCACAATCTTATTGAAGCATGTTAAGAATACTATTGAAAAAGTGGAAAAATCTCAAAATATTTATAAGATACATGATGAGTTACGCTTCTTCTTATTATCAATTGTCTTTTAGATGGAACATCATGTTGAATACCTTCTTTACTTTTTGAGTTTAACAATTTTGGGTGGAGAGATCTAACTATGGATCTTTAAAGTGGTGGTTGTTCTCTTATTCTTAAAGCTAGCTATGCTCAACAAATTGATAGTAGGGTAATGTATTAGGTGTAAACAAAGTTCTACAATAACGTAATATCAATTGGAGTGGTGATGTAACATGTATGTTGTAATTTTATCCAGATTGCGGTGTCGTATATCTTGCTGCACTAGCTGGCGACTGGGGACTAGCAAAATCTTATTTCAAAGGCAAACAAGCACAGTATAATAGCCGTTTTCAGCTAACTGCTCGAAAAGAGACAGCTCTTCATATTGCTGCTGCTGCAGGACAAACAAATTTTGTGGAGAATTTGGTTAAAATAATGACACCTGAAGACTTGGTCCATGAAACAGAATTTGGTTATACGGCCCTTTGTTGTGCAGCTATATCAGGAAATGTTAGAATAGGTGAAGTGTTAGTGAAAAAGAATAGAGACCTACCAAATTCGCGTGGTAACAATGGTTCTGCTTCTTTCCCACTTTATCTGGCAGTTACACACAAACGAAGAGCTATGACCGACTATCTCTTACCTAACACTAATTTAATTAATTTTGAAATGTCCGACAGAGTTGATCTTCTCCACGCAACCATCTTGTCGGACTATTACGGTAATTGGCGCCATCACACCTTTTTTTTTTTTTTAACTGGATTGTCAAAATTGGGGACGAAAGTATAA

mRNA sequence

ATGGAGCAATCGTCTTCTCTGGCCAATGAAGGAGTAGGAAACTCCGGTCACAGCTCACGCATAGACATTGAATCTGATCCATGCCTAACCACCAAGAATTGCGGTGTCGTATATCTTGCTGCACTAGCTGGCGACTGGGGACTAGCAAAATCTTATTTCAAAGGCAAACAAGCACAGTATAATAGCCGTTTTCAGCTAACTGCTCGAAAAGAGACAGCTCTTCATATTGCTGCTGCTGCAGGACAAACAAATTTTGTGGAGAATTTGGTTAAAATAATGACACCTGAAGACTTGGTCCATGAAACAGAATTTGGTTATACGGCCCTTTGTTGTGCAGCTATATCAGGAAATGTTAGAATAGGTGAAGTGTTAGTGAAAAAGAATAGAGACCTACCAAATTCGCGTGGTAACAATGGTTCTGCTTCTTTCCCACTTTATCTGGCAGTTACACACAAACGAAGAGCTATGACCGACTATCTCTTACCTAACACTAATTTAATTAATTTTGAAATGTCCGACAGAGTTGATCTTCTCCACGCAACCATCTTGTCGGACTATTACGGTAATTGGCGCCATCACACCTTTTTTTTTTTTTTAACTGGATTGTCAAAATTGGGGACGAAAGTATAA

Coding sequence (CDS)

ATGGAGCAATCGTCTTCTCTGGCCAATGAAGGAGTAGGAAACTCCGGTCACAGCTCACGCATAGACATTGAATCTGATCCATGCCTAACCACCAAGAATTGCGGTGTCGTATATCTTGCTGCACTAGCTGGCGACTGGGGACTAGCAAAATCTTATTTCAAAGGCAAACAAGCACAGTATAATAGCCGTTTTCAGCTAACTGCTCGAAAAGAGACAGCTCTTCATATTGCTGCTGCTGCAGGACAAACAAATTTTGTGGAGAATTTGGTTAAAATAATGACACCTGAAGACTTGGTCCATGAAACAGAATTTGGTTATACGGCCCTTTGTTGTGCAGCTATATCAGGAAATGTTAGAATAGGTGAAGTGTTAGTGAAAAAGAATAGAGACCTACCAAATTCGCGTGGTAACAATGGTTCTGCTTCTTTCCCACTTTATCTGGCAGTTACACACAAACGAAGAGCTATGACCGACTATCTCTTACCTAACACTAATTTAATTAATTTTGAAATGTCCGACAGAGTTGATCTTCTCCACGCAACCATCTTGTCGGACTATTACGGTAATTGGCGCCATCACACCTTTTTTTTTTTTTTAACTGGATTGTCAAAATTGGGGACGAAAGTATAA

Protein sequence

MEQSSSLANEGVGNSGHSSRIDIESDPCLTTKNCGVVYLAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDLVHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTDYLLPNTNLINFEMSDRVDLLHATILSDYYGNWRHHTFFFFLTGLSKLGTKV

Homology

[Close]

BLAST of Cla019348 vs. TrEMBL
Match: F6HF61_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01590 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 39  LAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDL 98
           LAAL GDW  AK++ +       +R  +T R ETALHIAA A  T FVE LVK+M P+DL
Sbjct: 180 LAALNGDWKSAKAFLESNPQAVRAR--ITRRSETALHIAAGARHTRFVEELVKLMKPDDL 239

Query: 99  VHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTD 158
             + + G TALC AA SG  RI EV+V KNR+LP  RG+ G    PLY+A     + M  
Sbjct: 240 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVT--PLYMAALVGHKDMVR 299

Query: 159 YLLPNTNLINFEMSDRVDLLHATILSDYY 188
           YL   T   N    DR+ LL A I ++ +
Sbjct: 300 YLYSVTEEDNLTKEDRIGLLVAAITANLF 324

[Close]

BLAST of Cla019348 vs. TrEMBL
Match: A5C2E8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029434 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.0e-23
Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 39  LAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDL 98
           LAAL GDW  AK++ +       +R  +T R ETALHIAA A  T FVE LVK+M P+DL
Sbjct: 180 LAALNGDWKSAKAFLESNPQAVRAR--ITRRSETALHIAAGARHTRFVEELVKLMKPDDL 239

Query: 99  VHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTD 158
             + + G TALC AA SG  RI EV+V KNR+LP  RG+ G    PLY+A     + M  
Sbjct: 240 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVT--PLYMAALVGHKDMVR 299

Query: 159 YLLPNTNLINFEMSDRVDLLHATILSDYY 188
           YL   T   N    DR+ LL A I ++ +
Sbjct: 300 YLYSVTEEDNLTKEDRIGLLVAAITANLF 324

[Close]

BLAST of Cla019348 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.6e-23
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 1


Query: 37  VYLAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPE 96
           +Y AAL GDW  A+S  K   +   S + +T   ETALHIAA A    FVE L+  MT +
Sbjct: 116 LYHAALKGDWEKAESILKADTSWSVSNY-ITRDNETALHIAAGAKHVEFVEKLIDTMTLD 175

Query: 97  DLVHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAM 156
           D+V     G TALC AA SG VRI E++VKKN+DLP  RG  G+A+ PL++A++++R+ M
Sbjct: 176 DMVIINTHGNTALCFAATSGVVRIAELMVKKNKDLPLIRG-FGNAT-PLFMAISYQRKQM 235

Query: 157 TDYLLPNTNLINFEMSDRVDLLHATILSDYY 188
             YL   T+       D+++LL ATI SD+Y
Sbjct: 236 ASYLFSVTDRKQLTSQDQIELLIATIHSDFY 263

[Close]

BLAST of Cla019348 vs. TrEMBL
Match: A0A059CB97_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04258 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-23
Identity = 67/152 (44.08%), Postives = 87/152 (57.24%), Query Frame = 1


Query: 37  VYLAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPE 96
           +Y AA+ GDW  A+ + +      N R  +T + +T LHIAA A  T FVE +VK+M+P 
Sbjct: 153 LYNAAMKGDWETAEKFLRSHPGAINVR--ITKKMDTVLHIAAGAKHTKFVEEVVKMMSPA 212

Query: 97  DLVHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAM 156
           DL    +  +TALC AA SG  +I E +V KNRDLP  RGN G    PLY+A     R M
Sbjct: 213 DLALRNKSNHTALCFAAASGVAKIAETMVNKNRDLPGMRGNKGVT--PLYIAALFGHRDM 272

Query: 157 TDYLLPNTNLINFEMSDRVDLLHATILSDYYG 189
             YLL  T+  +    D V LL ATI +D +G
Sbjct: 273 VSYLLRVTDPEHLTEDDYVTLLIATINTDMFG 300

[Close]

BLAST of Cla019348 vs. TrEMBL
Match: A0A0A0KNG9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22
Identity = 66/153 (43.14%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 37  VYLAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPE 96
           +Y +AL G+W  A+     K++  ++   +T  KE ALHIAA A  T+FV+NLVK M  E
Sbjct: 43  LYQSALEGNWETAEYILMKKRSLLSA--SITRDKERALHIAAGAKHTDFVKNLVKQMNKE 102

Query: 97  DLVHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAM 156
           ++  +   G TALC AA SG V+I E++V KN+DLP  RG       PL++AV++K + M
Sbjct: 103 EIALKNRHGNTALCFAAASGVVKIAELMVNKNKDLPLIRGFGDVT--PLFMAVSYKCKPM 162

Query: 157 TDYLLPNTNLINFEMSDRVDLLHATILSDYYGN 190
             YLL  T LI+    ++++LL ATI SD++G+
Sbjct: 163 ALYLLSVTQLIHLTSQEQIELLIATIYSDFFGS 191

[Close]

BLAST of Cla019348 vs. NCBI nr
Match: gi|659067652|ref|XP_008440580.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 2.2e-23
Identity = 78/189 (41.27%), Postives = 109/189 (57.67%), Query Frame = 1


Query: 2   EQSSSLANEGVGNSGHSSRIDIESDPC---LTTKNCGVVYLAALAGDWGLAKSYFKGKQA 61
           +Q +S     V N    S I ++ +     +T K   + Y AAL GDW  A+S  K   +
Sbjct: 130 DQINSSCAATVDNQTIDSEIPLDEETKQLRITAKKISL-YHAALKGDWEKAESILKADTS 189

Query: 62  QYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDLVHETEFGYTALCCAAISGNV 121
              S + +T   ETALHIAA A    FVE L+ IMT +D+      G TALC AA SG V
Sbjct: 190 WSVSNY-ITRDNETALHIAAGAKHVEFVEKLIDIMTLDDMAIINTHGNTALCFAATSGVV 249

Query: 122 RIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTDYLLPNTNLINFEMSDRVDLL 181
           RI E++VKKN+DLP  RG  G+A+ PL++A++++R+ M  YL   T+       D+++LL
Sbjct: 250 RIAELMVKKNKDLPLIRG-FGNAT-PLFMAISYQRKQMASYLFSVTDRKQLTSQDQIELL 309

Query: 182 HATILSDYY 188
            ATI SD+Y
Sbjct: 310 IATIHSDFY 314

[Close]

BLAST of Cla019348 vs. NCBI nr
Match: gi|147784800|emb|CAN68568.1| (hypothetical protein VITISV_029434 [Vitis vinifera])

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 39  LAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDL 98
           LAAL GDW  AK++ +       +R  +T R ETALHIAA A  T FVE LVK+M P+DL
Sbjct: 180 LAALNGDWKSAKAFLESNPQAVRAR--ITRRSETALHIAAGARHTRFVEELVKLMKPDDL 239

Query: 99  VHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTD 158
             + + G TALC AA SG  RI EV+V KNR+LP  RG+ G    PLY+A     + M  
Sbjct: 240 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVT--PLYMAALVGHKDMVR 299

Query: 159 YLLPNTNLINFEMSDRVDLLHATILSDYY 188
           YL   T   N    DR+ LL A I ++ +
Sbjct: 300 YLYSVTEEDNLTKEDRIGLLVAAITANLF 324

[Close]

BLAST of Cla019348 vs. NCBI nr
Match: gi|297737987|emb|CBI27188.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 39  LAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDL 98
           LAAL GDW  AK++ +       +R  +T R ETALHIAA A  T FVE LVK+M P+DL
Sbjct: 180 LAALNGDWKSAKAFLESNPQAVRAR--ITRRSETALHIAAGARHTRFVEELVKLMKPDDL 239

Query: 99  VHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTD 158
             + + G TALC AA SG  RI EV+V KNR+LP  RG+ G    PLY+A     + M  
Sbjct: 240 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVT--PLYMAALVGHKDMVR 299

Query: 159 YLLPNTNLINFEMSDRVDLLHATILSDYY 188
           YL   T   N    DR+ LL A I ++ +
Sbjct: 300 YLYSVTEEDNLTKEDRIGLLVAAITANLF 324

[Close]

BLAST of Cla019348 vs. NCBI nr
Match: gi|731371413|ref|XP_010648914.1| (PREDICTED: uncharacterized protein LOC100260982 [Vitis vinifera])

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 69/149 (46.31%), Postives = 87/149 (58.39%), Query Frame = 1


Query: 39  LAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPEDL 98
           LAAL GDW  AK++ +       +R  +T R ETALHIAA A  T FVE LVK+M P+DL
Sbjct: 180 LAALNGDWKSAKAFLESNPQAVRAR--ITRRSETALHIAAGARHTRFVEELVKLMKPDDL 239

Query: 99  VHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAMTD 158
             + + G TALC AA SG  RI EV+V KNR+LP  RG+ G    PLY+A     + M  
Sbjct: 240 ALQNKVGNTALCFAAASGITRIAEVMVNKNRELPMIRGSKGVT--PLYMAALVGHKDMVR 299

Query: 159 YLLPNTNLINFEMSDRVDLLHATILSDYY 188
           YL   T   N    DR+ LL A I ++ +
Sbjct: 300 YLYSVTEEDNLTKEDRIGLLVAAITANLF 324

[Close]

BLAST of Cla019348 vs. NCBI nr
Match: gi|659067650|ref|XP_008440571.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis melo])

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-23
Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 1


Query: 37  VYLAALAGDWGLAKSYFKGKQAQYNSRFQLTARKETALHIAAAAGQTNFVENLVKIMTPE 96
           +Y AAL GDW  A+S  K   +   S + +T   ETALHIAA A    FVE L+ IMT +
Sbjct: 178 LYHAALKGDWEKAESILKADTSWSVSNY-ITRDNETALHIAAGAKHVEFVEKLIDIMTLD 237

Query: 97  DLVHETEFGYTALCCAAISGNVRIGEVLVKKNRDLPNSRGNNGSASFPLYLAVTHKRRAM 156
           D+      G TALC AA SG VRI E++VKKN+DLP  RG  G+A+ PL++A++++R+ M
Sbjct: 238 DMAIINTHGNTALCFAATSGVVRIAELMVKKNKDLPLIRG-FGNAT-PLFMAISYQRKQM 297

Query: 157 TDYLLPNTNLINFEMSDRVDLLHATILSDYY 188
             YL   T+       D+++LL ATI SD+Y
Sbjct: 298 ASYLFSVTDRKQLTSQDQIELLIATIHSDFY 325

The following BLAST results are available for this feature:

BLAST of Cla019348 vs. TrEMBL


Match Name	E-value	Identity	Description
F6HF61_VITVI	2.0e-23	46.31	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01590 PE=4 SV=...	[more]
A5C2E8_VITVI	2.0e-23	46.31	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029434 PE=4 SV=1	[more]
A0A0A0LU19_CUCSA	2.6e-23	46.36	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1	[more]
A0A059CB97_EUCGR	3.4e-23	44.08	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E04258 PE=4 SV=1	[more]
A0A0A0KNG9_CUCSA	1.3e-22	43.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G174600 PE=4 SV=1	[more]

BLAST of Cla019348 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659067652\|ref\|XP_008440580.1\|	2.2e-23	41.27	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis ...	[more]
gi\|147784800\|emb\|CAN68568.1\|	2.9e-23	46.31	hypothetical protein VITISV_029434 [Vitis vinifera]	[more]
gi\|297737987\|emb\|CBI27188.3\|	2.9e-23	46.31	unnamed protein product [Vitis vinifera]	[more]
gi\|731371413\|ref\|XP_010648914.1\|	2.9e-23	46.31	PREDICTED: uncharacterized protein LOC100260982 [Vitis vinifera]	[more]
gi\|659067650\|ref\|XP_008440571.1\|	2.9e-23	46.36	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019348	Cla019348.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 104..133 score: 11.0coord: 69..97 score:
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 38..180 score: 2.0
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 48..129 score: 4.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 69..179 score: 13
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 38..184 score: 9.17
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 38..187 score: 9.2
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 38..187 score: 9.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019348	Cucsa.085500	Cucumber (Gy14) v1	cgywmB097
Cla019348	MELO3C002426.2	Melon (DHL92) v3.6.1	medwmB145
Cla019348	Bhi08G001468	Wax gourd	wgowmB473

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019348	Cucumber (Chinese Long) v3	cucwmB013
Cla019348	Watermelon (97103) v2	wmwmbB124
Cla019348	Cucumber (Gy14) v1	cgywmB227
Cla019348	Cucurbita maxima (Rimu)	cmawmB187
Cla019348	Cucurbita maxima (Rimu)	cmawmB371
Cla019348	Cucurbita moschata (Rifu)	cmowmB360
Cla019348	Melon (DHL92) v3.5.1	mewmB148
Cla019348	Melon (DHL92) v3.5.1	mewmB149
Cla019348	Watermelon (Charleston Gray)	wcgwmB223
Cla019348	Cucumber (Chinese Long) v2	cuwmB008
Cla019348	Cucurbita pepo (Zucchini)	cpewmB025
Cla019348	Cucurbita pepo (Zucchini)	cpewmB509
Cla019348	Bottle gourd (USVL1VR-Ls)	lsiwmB184
Cla019348	Cucumber (Gy14) v2	cgybwmB010
Cla019348	Silver-seed gourd	carwmB0489
Cla019348	Silver-seed gourd	carwmB1003