Cla019148 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla019148
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Germin-like protein (AHRD V1 ***- Q8H2A6_ANACO); contains Interpro domain(s) IPR014710 RmlC-like jelly roll fold
Location	Chr6 : 25463857 .. 25464501 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCTTCCTTCATAATTATTATACTCTTGCTTCTTCCTTATCCTTCTTCGTCCACCGACCCCGATCCGTTACAGGACTTCTGTGTAGCTGATTTAAATGCAACTGTTTCTCTTAGTGGTTTTCCTTGCAAGCCAGCTTCAGAAGTTACTGCAGATGATTTCTTCTTTGATGGATTGAGTAAAGAAGGCAACACAGACAATCCTTTTGGTTTTGGCCTCACACCAGGAAATGTTTTTGCATTGCCAGGACTCAATACACTTGGCCTATCCACGAACCGTATCGACCTTGCTCCGGGAGGAATGAATCCACCTCACTTGCATCCTCGTGCCTCTGAAATCGTTATCGTCATTAAAGGGAAGGTTCTTGTTGGGTTTATGACAGTAGATAATAAGTATTATCATAAGATTTTGACTGTGGGGCAGGTGTTCATTGTTCCTAGAGCGCTTGTTCATTTCCAGTATAATGTTGGACATAGGAAAGCTATTGTGCTTGCAGGTTTCAACAGTCAGTTGCCAGGAGGCGTGCTTGTCGCCGGAAATTTGTTTGCTTCAAATCCTCCGATCCCTGTTAAAATTCTGTCTAAAGCCTTACTAGTTGATGATGGTATTATCAACACCATAAAGTCTGAGTTTGCTGCTTAG

mRNA sequence

ATGCTTGCTTCCTTCATAATTATTATACTCTTGCTTCTTCCTTATCCTTCTTCGTCCACCGACCCCGATCCGTTACAGGACTTCTGTGTAGCTGATTTAAATGCAACTGTTTCTCTTAGTGGTTTTCCTTGCAAGCCAGCTTCAGAAGTTACTGCAGATGATTTCTTCTTTGATGGATTGAGTAAAGAAGGCAACACAGACAATCCTTTTGGTTTTGGCCTCACACCAGGAAATGTTTTTGCATTGCCAGGACTCAATACACTTGGCCTATCCACGAACCGTATCGACCTTGCTCCGGGAGGAATGAATCCACCTCACTTGCATCCTCGTGCCTCTGAAATCGTTATCGTCATTAAAGGGAAGGTTCTTGTTGGGTTTATGACAGTAGATAATAAGTATTATCATAAGATTTTGACTGTGGGGCAGGTGTTCATTGTTCCTAGAGCGCTTGTTCATTTCCAGTATAATGTTGGACATAGGAAAGCTATTGTGCTTGCAGGTTTCAACAGTCAGTTGCCAGGAGGCGTGCTTGTCGCCGGAAATTTGTTTGCTTCAAATCCTCCGATCCCTGTTAAAATTCTGTCTAAAGCCTTACTAGTTGATGATGGTATTATCAACACCATAAAGTCTGAGTTTGCTGCTTAG

Coding sequence (CDS)

ATGCTTGCTTCCTTCATAATTATTATACTCTTGCTTCTTCCTTATCCTTCTTCGTCCACCGACCCCGATCCGTTACAGGACTTCTGTGTAGCTGATTTAAATGCAACTGTTTCTCTTAGTGGTTTTCCTTGCAAGCCAGCTTCAGAAGTTACTGCAGATGATTTCTTCTTTGATGGATTGAGTAAAGAAGGCAACACAGACAATCCTTTTGGTTTTGGCCTCACACCAGGAAATGTTTTTGCATTGCCAGGACTCAATACACTTGGCCTATCCACGAACCGTATCGACCTTGCTCCGGGAGGAATGAATCCACCTCACTTGCATCCTCGTGCCTCTGAAATCGTTATCGTCATTAAAGGGAAGGTTCTTGTTGGGTTTATGACAGTAGATAATAAGTATTATCATAAGATTTTGACTGTGGGGCAGGTGTTCATTGTTCCTAGAGCGCTTGTTCATTTCCAGTATAATGTTGGACATAGGAAAGCTATTGTGCTTGCAGGTTTCAACAGTCAGTTGCCAGGAGGCGTGCTTGTCGCCGGAAATTTGTTTGCTTCAAATCCTCCGATCCCTGTTAAAATTCTGTCTAAAGCCTTACTAGTTGATGATGGTATTATCAACACCATAAAGTCTGAGTTTGCTGCTTAG

Protein sequence

MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGLSKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNLFASNPPIPVKILSKALLVDDGIINTIKSEFAA

Homology

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BLAST of Cla019148 vs. Swiss-Prot
Match: GLT2_ARATH (Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE=2 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-60
Identity = 112/213 (52.58%), Postives = 146/213 (68.54%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           +  SF+++I + +  PS S+D DPLQDFCV DL A+ S++GFPCK  S V+A DFFF GL
Sbjct: 10  LFRSFLLVICVFV-IPSLSSDSDPLQDFCVGDLKASPSINGFPCK--SSVSASDFFFSGL 69

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
               NT  P G  ++P NV   PGLNTLGLS N ++ APGG+NPPH HPRA+E  +VI+G
Sbjct: 70  GGPLNTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEG 129

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
            V VGF+T +N  + K+L  G++F+VPR LVHFQ+NVG  KA ++  FNSQLPG  ++  
Sbjct: 130 SVFVGFLTTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPS 189

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEFA 214
            LF SNP IP  +L+K    DD  +N +KS+FA
Sbjct: 190 TLFGSNPTIPNAVLTKTFRTDDVTVNKLKSKFA 219

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BLAST of Cla019148 vs. Swiss-Prot
Match: GLT1_ARATH (Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV=2)

HSP 1 Score: 232.3 bits (591), Expect = 5.1e-60
Identity = 110/213 (51.64%), Postives = 147/213 (69.01%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           +L SF+++  L +  PS S+D DPLQDFCV DL A+ S++GFPCK A  V+A DFF+ GL
Sbjct: 10  LLRSFLLMFCLFV-IPSLSSDSDPLQDFCVGDLKASASINGFPCKSA--VSASDFFYSGL 69

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
               +T NP G  + P NV   PGLNTLG+S N ++LAPGG+NPPHLHPRA+E+  VI+G
Sbjct: 70  GGPLDTSNPNGVTVAPANVLTFPGLNTLGISMNNVELAPGGVNPPHLHPRATEVGTVIEG 129

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
            V VGF++ +N  + K+L  G+ F++PR LVHFQ+NVG  KA ++  FNSQLPG V++  
Sbjct: 130 SVFVGFLSTNNTLFSKVLNAGEAFVIPRGLVHFQWNVGQVKARMITAFNSQLPGAVVLPS 189

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEFA 214
            LF S P IP  +L++A   DD  +  +KS+FA
Sbjct: 190 TLFGSKPEIPNAVLTRAFRTDDTTVQNLKSKFA 219

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BLAST of Cla019148 vs. Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.7e-58
Identity = 112/204 (54.90%), Postives = 142/204 (69.61%), Query Frame = 1


Query: 9   ILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGLSKEGNTDN 68
           ++L L  PS + DPD LQD CVADL + V L+GFPCK  + VTADDFFF GL   GNT+N
Sbjct: 14  VVLALAAPSLAGDPDMLQDVCVADLASPVKLNGFPCK--ANVTADDFFFAGLKNPGNTNN 73

Query: 69  PFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKVLVGFMT 128
           P G  +T  NV + PG+NTLG+S  RID APGG NPPH HPRA+EI+ V++G + VGF+T
Sbjct: 74  PAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFIT 133

Query: 129 VDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNLFASNPP 188
             NK + K +T G+VF+ PR LVHFQ N GH  A V+A FNSQL G   +A  LFA+ PP
Sbjct: 134 TANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPP 193

Query: 189 IPVKILSKALLVDDGIINTIKSEF 213
           +P  +L+KA  VD   ++ IK++F
Sbjct: 194 VPSDVLAKAFRVDVPQVDAIKAKF 215

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BLAST of Cla019148 vs. Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.2e-56
Identity = 109/211 (51.66%), Postives = 144/211 (68.25%), Query Frame = 1


Query: 6   IIIILLLLPYPSSSTDPDPLQDFCVA----DLNATVSLSGFPCKPASEVTADDFFFDGLS 65
           + + +L +   + + DP+P+QDFCVA       A+ +  GFPCKPAS V +DDFFF GL+
Sbjct: 21  LTVAVLAVLASTCAADPEPIQDFCVAVPRAGGEASPAYPGFPCKPASAVVSDDFFFAGLA 80

Query: 66  KEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGK 125
             G+TDNPFG  L PGNV A P LNTLG++ NR+DLAPGG+NP H HPRA+E+V VI G+
Sbjct: 81  AAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGR 140

Query: 126 VLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGN 185
           +LVGF++   KYY K++  G+ F +PR L+HFQYN G+  A  +  FNSQLPG V  A  
Sbjct: 141 MLVGFVSTAGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATA 200

Query: 186 LFASNPPIPVKILSKALLVDDGIINTIKSEF 213
           LF ++P IP  +L+K+  VD  II  +KS+F
Sbjct: 201 LFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231

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BLAST of Cla019148 vs. Swiss-Prot
Match: OXO2_HORVU (Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.6e-56
Identity = 114/217 (52.53%), Postives = 149/217 (68.66%), Query Frame = 1


Query: 2   LASFIIIILLLLPYPSSSTDPDPLQDFCVADLNA-TVSLSGFPCKPASEVTADDFFFDGL 61
           LA  +  +LLL P   +S DPDPLQDFCVADL+   VS++G PCKP SE   D  F   L
Sbjct: 7   LAVSLFAVLLLAPAVLAS-DPDPLQDFCVADLDGKAVSVNGHPCKPMSEAGDDFLFSSKL 66

Query: 62  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 121
           +K GNT  P G  +T  +V   PG NTLG+S NR+D APGG NPPH+HPRA+EI IV+KG
Sbjct: 67  AKAGNTSTPNGSAVTELDVAEWPGTNTLGVSMNRVDFAPGGTNPPHVHPRATEIGIVMKG 126

Query: 122 KVLVGFM-TVD--NKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVL 181
           ++LVG + ++D  NK Y +++  G+ F++PR L+HFQ+NVG  +A ++  FNSQ PG V 
Sbjct: 127 ELLVGILGSLDSGNKLYSRVVRAGETFLIPRGLMHFQFNVGKTEASMVVSFNSQNPGIVF 186

Query: 182 VAGNLFASNPPIPVKILSKALLVDDGIINTIKSEFAA 215
           V   LF SNPPIP  +L+KAL V+ G++  +KS+FAA
Sbjct: 187 VPLTLFGSNPPIPTPVLTKALRVEAGVVELLKSKFAA 222

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BLAST of Cla019148 vs. TrEMBL
Match: A0A0A0LUD9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G007900 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 8.7e-99
Identity = 177/212 (83.49%), Postives = 196/212 (92.45%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           +L SFI +ILL  P+PSSSTDPDPLQDFCVADLNATVS++GFPCKP SEVT DDFF+DGL
Sbjct: 2   LLVSFIFLILL--PHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGL 61

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
           SKEGNT NPFGFGLTPGNV ALPGLNTLGLS NRIDLAPGGMNPPHLHPRASEIVIV+KG
Sbjct: 62  SKEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKG 121

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
           +VLVGF+TVDN YYHK+L VG++FI+PRALVHFQYNVG +KA+VLAGFNSQLPGGVLVAG
Sbjct: 122 RVLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAG 181

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEF 213
           NLFASNPPIP KILSKAL V+D ++ TIKS+F
Sbjct: 182 NLFASNPPIPNKILSKALQVNDDVVKTIKSDF 211

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BLAST of Cla019148 vs. TrEMBL
Match: A0A0A0LP04_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G007890 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 1.2e-87
Identity = 159/213 (74.65%), Postives = 183/213 (85.92%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           ML  FII  LLLLPYPS S DPDPLQDFCVADLNATVSL+GFPCKPASEVTADDFFFDGL
Sbjct: 11  MLVCFII--LLLLPYPSLSADPDPLQDFCVADLNATVSLNGFPCKPASEVTADDFFFDGL 70

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
           SKEGNTDNPFGFG+T GNV   PGLNTLGLS NR+DLA GG+N PH HPRA+E ++VIKG
Sbjct: 71  SKEGNTDNPFGFGVTQGNVLTFPGLNTLGLSMNRVDLARGGINAPHSHPRATESIVVIKG 130

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
           KVLVGF++  + YY+K+LTVGQ+F+VPR LVHFQYNVGH KA ++  FNSQLPG V+V+ 
Sbjct: 131 KVLVGFVSTSSVYYYKVLTVGQMFVVPRGLVHFQYNVGHGKATLITAFNSQLPGAVVVSR 190

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEFA 214
            LFASNPP+PV+IL+KA  VD  +IN+IKS+FA
Sbjct: 191 TLFASNPPLPVEILTKAFQVDASVINSIKSKFA 221

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BLAST of Cla019148 vs. TrEMBL
Match: W9QZH2_9ROSA (Germin-like protein subfamily T member 2 OS=Morus notabilis GN=L484_008941 PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.0e-76
Identity = 135/210 (64.29%), Postives = 164/210 (78.10%), Query Frame = 1


Query: 5   FIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGLSKEG 64
           F +++LLL+P+PS S+DPDPLQDFCVADL AT S +GFPCKP S VT++DFFFDGLSK+G
Sbjct: 15  FCLLLLLLIPFPSHSSDPDPLQDFCVADLTATPSTNGFPCKPVSAVTSEDFFFDGLSKQG 74

Query: 65  NTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKVLV 124
           NT N FG  LTPGNV A PGLNT G+S NR+D APGG+NPPH HPRASE  +VI GK+LV
Sbjct: 75  NTKNAFGSSLTPGNVLAFPGLNTQGISMNRVDFAPGGLNPPHSHPRASETGVVITGKLLV 134

Query: 125 GFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNLFA 184
           GF+T +N +Y K+LT GQ+F+VPR LVHFQ NVG   A+    FNS LPG  L A  LFA
Sbjct: 135 GFVTTNNVFYSKVLTAGQMFVVPRGLVHFQQNVGEGNALAFTAFNSHLPGAALAATTLFA 194

Query: 185 SNPPIPVKILSKALLVDDGIINTIKSEFAA 215
           S P +P ++L+KA  V+D I+NTIKS+F A
Sbjct: 195 SKPQVPNQVLTKAFQVEDDIVNTIKSKFGA 224

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BLAST of Cla019148 vs. TrEMBL
Match: M5WNE5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011491mg PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.3e-75
Identity = 134/206 (65.05%), Postives = 166/206 (80.58%), Query Frame = 1


Query: 7   IIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGLSKEGNT 66
           ++ +LLLP PS+  DPDPLQDFCVADLNA+ S++GFPCKP S+ T+DDFFFDGLSKEGNT
Sbjct: 1   MVSMLLLPLPSNGADPDPLQDFCVADLNASTSVNGFPCKPVSKTTSDDFFFDGLSKEGNT 60

Query: 67  DNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKVLVGF 126
            NPFG  LT GNV A PGLNTLG+S NR+D APGG+NPPH HPRASE  +VI+GK+LVGF
Sbjct: 61  SNPFGANLTAGNVLAFPGLNTLGISMNRVDFAPGGINPPHSHPRASESGVVIEGKLLVGF 120

Query: 127 MTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNLFASN 186
           +T +N +Y K+L+ GQ+F++PR LVHFQ NVG  KA+    FNSQLPG V++   LFAS 
Sbjct: 121 VTTNNVFYSKVLSAGQMFVIPRGLVHFQLNVGEGKALAFTAFNSQLPGAVVLPLTLFASM 180

Query: 187 PPIPVKILSKALLVDDGIINTIKSEF 213
           P IP ++L+KAL VD  +INTI+S+F
Sbjct: 181 PSIPDQVLTKALQVDKDVINTIRSKF 206

[Close]

BLAST of Cla019148 vs. TrEMBL
Match: K4BKL0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 3.1e-72
Identity = 130/212 (61.32%), Postives = 167/212 (78.77%), Query Frame = 1


Query: 4   SFIIIILLLLPYPSSSTDPDPLQDFCVADLNAT-VSLSGFPCKPASEVTADDFFFDGLSK 63
           +F++++L++LP+PS S DPDPLQDFCV  LN T  S++GFPCKP S+VT+DDFFFDGL+K
Sbjct: 6   TFLLVMLVVLPFPSHSADPDPLQDFCVGILNDTSASINGFPCKPTSQVTSDDFFFDGLTK 65

Query: 64  EGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKV 123
           EGNTDN FGF  T GNV A PGLNTLGLS NR+D APGG+NPPH HPRA+E  +VIKGK+
Sbjct: 66  EGNTDNVFGFTATVGNVLAFPGLNTLGLSMNRVDFAPGGLNPPHSHPRATETGVVIKGKL 125

Query: 124 LVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNL 183
            VGF+T +N  + K+LTVG++F+VPR LVHFQ NVG  KA+ +  FNS LPG V++   L
Sbjct: 126 YVGFLTTNNVLHAKVLTVGEMFVVPRGLVHFQMNVGKEKAMTITAFNSHLPGSVVLPTTL 185

Query: 184 FASNPPIPVKILSKALLVDDGIINTIKSEFAA 215
           FAS PPIP  +L+KA  V+  +I+ IK++F +
Sbjct: 186 FASMPPIPNNVLTKAFQVEASVIDDIKAKFGS 217

[Close]

BLAST of Cla019148 vs. NCBI nr
Match: gi|659107442|ref|XP_008453674.1| (PREDICTED: germin-like protein subfamily T member 1 [Cucumis melo])

HSP 1 Score: 369.4 bits (947), Expect = 4.3e-99
Identity = 180/212 (84.91%), Postives = 195/212 (91.98%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           +L SFII ILL  PYPS STDPDPLQDFCVADLNATVS+SGFPCKP S+VT +DFFFDGL
Sbjct: 2   LLISFIIFILL--PYPSISTDPDPLQDFCVADLNATVSVSGFPCKPISKVTVEDFFFDGL 61

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
           SKEGNT NPFGFGLTPGNV  LPGLNTLGLS NRIDLAPGGMNPPHLHPRASEIVIV+KG
Sbjct: 62  SKEGNTKNPFGFGLTPGNVLKLPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKG 121

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
           +VLVGF+TVDN YYHK+L VG+VFI+PRALVHFQYNVGHRKA+VLAGFNSQLPGGVLVAG
Sbjct: 122 RVLVGFLTVDNVYYHKVLKVGEVFIIPRALVHFQYNVGHRKAVVLAGFNSQLPGGVLVAG 181

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEF 213
           NLFASNPPIP  ILSKALLV++ +I TIKS+F
Sbjct: 182 NLFASNPPIPNVILSKALLVNEDVIKTIKSDF 211

[Close]

BLAST of Cla019148 vs. NCBI nr
Match: gi|449441043|ref|XP_004138293.1| (PREDICTED: germin-like protein subfamily T member 1 [Cucumis sativus])

HSP 1 Score: 367.9 bits (943), Expect = 1.2e-98
Identity = 177/212 (83.49%), Postives = 196/212 (92.45%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           +L SFI +ILL  P+PSSSTDPDPLQDFCVADLNATVS++GFPCKP SEVT DDFF+DGL
Sbjct: 2   LLVSFIFLILL--PHPSSSTDPDPLQDFCVADLNATVSVTGFPCKPISEVTVDDFFYDGL 61

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
           SKEGNT NPFGFGLTPGNV ALPGLNTLGLS NRIDLAPGGMNPPHLHPRASEIVIV+KG
Sbjct: 62  SKEGNTKNPFGFGLTPGNVHALPGLNTLGLSMNRIDLAPGGMNPPHLHPRASEIVIVLKG 121

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
           +VLVGF+TVDN YYHK+L VG++FI+PRALVHFQYNVG +KA+VLAGFNSQLPGGVLVAG
Sbjct: 122 RVLVGFLTVDNVYYHKVLKVGELFIIPRALVHFQYNVGRKKAVVLAGFNSQLPGGVLVAG 181

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEF 213
           NLFASNPPIP KILSKAL V+D ++ TIKS+F
Sbjct: 182 NLFASNPPIPNKILSKALQVNDDVVKTIKSDF 211

[Close]

BLAST of Cla019148 vs. NCBI nr
Match: gi|659105710|ref|XP_008453157.1| (PREDICTED: germin-like protein subfamily T member 2 [Cucumis melo])

HSP 1 Score: 331.3 bits (848), Expect = 1.3e-87
Identity = 159/205 (77.56%), Postives = 175/205 (85.37%), Query Frame = 1


Query: 9   ILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGLSKEGNTDN 68
           ILLLLPYPS S DPDPLQDFCV DLNATVSL+GFPCKP SEVTADDFFFDGLSKEGNTDN
Sbjct: 17  ILLLLPYPSLSADPDPLQDFCVGDLNATVSLNGFPCKPVSEVTADDFFFDGLSKEGNTDN 76

Query: 69  PFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKVLVGFMT 128
           PFGFG+T GNV A PGLNTLGLS NR+DLAPGG+N PH HPRASE ++VIKGKVLVGF++
Sbjct: 77  PFGFGVTQGNVLAFPGLNTLGLSMNRVDLAPGGINAPHSHPRASESIVVIKGKVLVGFVS 136

Query: 129 VDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNLFASNPP 188
             N YY K+LTVGQ+FIVPR LVHFQYNVG  KAI++  FNSQLPG V+V+  LFASNPP
Sbjct: 137 TSNVYYSKVLTVGQMFIVPRGLVHFQYNVGRGKAILITAFNSQLPGAVVVSRTLFASNPP 196

Query: 189 IPVKILSKALLVDDGIINTIKSEFA 214
           IPVKIL+K   VD  +IN IKS FA
Sbjct: 197 IPVKILTKTFQVDASVINGIKSRFA 221

[Close]

BLAST of Cla019148 vs. NCBI nr
Match: gi|449440734|ref|XP_004138139.1| (PREDICTED: germin-like protein subfamily T member 2 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 1.7e-87
Identity = 159/213 (74.65%), Postives = 183/213 (85.92%), Query Frame = 1


Query: 1   MLASFIIIILLLLPYPSSSTDPDPLQDFCVADLNATVSLSGFPCKPASEVTADDFFFDGL 60
           ML  FII  LLLLPYPS S DPDPLQDFCVADLNATVSL+GFPCKPASEVTADDFFFDGL
Sbjct: 11  MLVCFII--LLLLPYPSLSADPDPLQDFCVADLNATVSLNGFPCKPASEVTADDFFFDGL 70

Query: 61  SKEGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKG 120
           SKEGNTDNPFGFG+T GNV   PGLNTLGLS NR+DLA GG+N PH HPRA+E ++VIKG
Sbjct: 71  SKEGNTDNPFGFGVTQGNVLTFPGLNTLGLSMNRVDLARGGINAPHSHPRATESIVVIKG 130

Query: 121 KVLVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAG 180
           KVLVGF++  + YY+K+LTVGQ+F+VPR LVHFQYNVGH KA ++  FNSQLPG V+V+ 
Sbjct: 131 KVLVGFVSTSSVYYYKVLTVGQMFVVPRGLVHFQYNVGHGKATLITAFNSQLPGAVVVSR 190

Query: 181 NLFASNPPIPVKILSKALLVDDGIINTIKSEFA 214
            LFASNPP+PV+IL+KA  VD  +IN+IKS+FA
Sbjct: 191 TLFASNPPLPVEILTKAFQVDASVINSIKSKFA 221

[Close]

BLAST of Cla019148 vs. NCBI nr
Match: gi|698446155|ref|XP_009768843.1| (PREDICTED: germin-like protein subfamily T member 2 [Nicotiana sylvestris])

HSP 1 Score: 295.4 bits (755), Expect = 7.8e-77
Identity = 139/212 (65.57%), Postives = 170/212 (80.19%), Query Frame = 1


Query: 4   SFIIIILLLLPYPSSSTDPDPLQDFCVADLNAT-VSLSGFPCKPASEVTADDFFFDGLSK 63
           +F++IIL++LP+PS S DPDPLQDFCV  LN+T  SL+GFPCKPASEVT+DDFFFDGLSK
Sbjct: 15  TFLLIILVVLPFPSHSADPDPLQDFCVGILNSTSTSLNGFPCKPASEVTSDDFFFDGLSK 74

Query: 64  EGNTDNPFGFGLTPGNVFALPGLNTLGLSTNRIDLAPGGMNPPHLHPRASEIVIVIKGKV 123
           EG+TDN FGF +TPGNV A PGLNTLGLS NR+D APGG+NPPH HPRA+E  +VIKGK+
Sbjct: 75  EGDTDNVFGFSVTPGNVLAFPGLNTLGLSMNRVDYAPGGINPPHSHPRATESGVVIKGKL 134

Query: 124 LVGFMTVDNKYYHKILTVGQVFIVPRALVHFQYNVGHRKAIVLAGFNSQLPGGVLVAGNL 183
            VGF+T DNK+Y K+LT GQ+F+VPR LVHFQ NVG  KA+    FNS LPG V++   L
Sbjct: 135 FVGFVTTDNKFYSKVLTAGQMFVVPRGLVHFQMNVGKGKALTFTAFNSHLPGAVVLPTTL 194

Query: 184 FASNPPIPVKILSKALLVDDGIINTIKSEFAA 215
           FAS PPIP  +L+K   V+  +I+ IK++F A
Sbjct: 195 FASTPPIPNDVLTKTFQVEASVIDGIKAKFGA 226

The following BLAST results are available for this feature:

BLAST of Cla019148 vs. Swiss-Prot


Match Name	E-value	Identity	Description
GLT2_ARATH	1.3e-60	52.58	Germin-like protein subfamily T member 2 OS=Arabidopsis thaliana GN=At1g18980 PE...	[more]
GLT1_ARATH	5.1e-60	51.64	Germin-like protein subfamily T member 1 OS=Arabidopsis thaliana GN=GLP1 PE=2 SV...	[more]
GL11_ORYSJ	3.7e-58	54.90	Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1	[more]
GL37_ORYSJ	1.2e-56	51.66	Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1	[more]
OXO2_HORVU	7.6e-56	52.53	Oxalate oxidase 2 OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of Cla019148 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LUD9_CUCSA	8.7e-99	83.49	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G007900 PE=3 SV=1	[more]
A0A0A0LP04_CUCSA	1.2e-87	74.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G007890 PE=3 SV=1	[more]
W9QZH2_9ROSA	6.0e-76	64.29	Germin-like protein subfamily T member 2 OS=Morus notabilis GN=L484_008941 PE=3 ...	[more]
M5WNE5_PRUPE	2.3e-75	65.05	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011491mg PE=3 SV=1	[more]
K4BKL0_SOLLC	3.1e-72	61.32	Uncharacterized protein OS=Solanum lycopersicum PE=3 SV=1	[more]

BLAST of Cla019148 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107442\|ref\|XP_008453674.1\|	4.3e-99	84.91	PREDICTED: germin-like protein subfamily T member 1 [Cucumis melo]	[more]
gi\|449441043\|ref\|XP_004138293.1\|	1.2e-98	83.49	PREDICTED: germin-like protein subfamily T member 1 [Cucumis sativus]	[more]
gi\|659105710\|ref\|XP_008453157.1\|	1.3e-87	77.56	PREDICTED: germin-like protein subfamily T member 2 [Cucumis melo]	[more]
gi\|449440734\|ref\|XP_004138139.1\|	1.7e-87	74.65	PREDICTED: germin-like protein subfamily T member 2 [Cucumis sativus]	[more]
gi\|698446155\|ref\|XP_009768843.1\|	7.8e-77	65.57	PREDICTED: germin-like protein subfamily T member 2 [Nicotiana sylvestris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001929	Germin
IPR006045	Cupin_1
IPR011051	RmlC_Cupin_sf
IPR014710	RmlC-like_jellyroll
IPR019780	Germin_Mn-BS

Vocabulary: **Molecular Function**
Term	Definition
GO:0030145	manganese ion binding
GO:0045735	nutrient reservoir activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044710	single-organism metabolic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0046653	tetrahydrofolate metabolic process
biological_process	GO:0019430	removal of superoxide radicals
biological_process	GO:0008150	biological_process
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0045735	nutrient reservoir activity
molecular_function	GO:0004784	superoxide dismutase activity
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0030272	5-formyltetrahydrofolate cyclo-ligase activity
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla019148	Cla019148.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 169..184 score: 8.6E-21coord: 106..126 score: 8.6E-21coord: 136..156 score: 8.6
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 60..201 score: 7.9
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 58..206 score: 1.2
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 21..212 score: 9.51
IPR014710	RmlC-like jelly roll fold	GENE3D	G3DSA:2.60.120.10		coord: 20..212 score: 1.2
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 101..114 scor
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 2..213 score: 8.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla019148	Cla97C06G126150	Watermelon (97103) v2	wmwmbB406
Cla019148	Csa1G007890	Cucumber (Chinese Long) v2	cuwmB094
Cla019148	MELO3C017139	Melon (DHL92) v3.5.1	mewmB289
Cla019148	ClCG06G016560	Watermelon (Charleston Gray)	wcgwmB344
Cla019148	CSPI01G01900	Wild cucumber (PI 183967)	cpiwmB099
Cla019148	Cucsa.197360	Cucumber (Gy14) v1	cgywmB390
Cla019148	CmaCh11G001760	Cucurbita maxima (Rimu)	cmawmB136
Cla019148	CmaCh10G001630	Cucurbita maxima (Rimu)	cmawmB072
Cla019148	CmoCh11G001330	Cucurbita moschata (Rifu)	cmowmB128
Cla019148	CmoCh10G001750	Cucurbita moschata (Rifu)	cmowmB064
Cla019148	Lsi06G015040	Bottle gourd (USVL1VR-Ls)	lsiwmB414
Cla019148	Cp4.1LG18g08150	Cucurbita pepo (Zucchini)	cpewmB373
Cla019148	CsGy1G001940	Cucumber (Gy14) v2	cgybwmB094
Cla019148	MELO3C017139.2	Melon (DHL92) v3.6.1	medwmB283
Cla019148	CsaV3_1G001940	Cucumber (Chinese Long) v3	cucwmB105
Cla019148	Bhi02G000283	Wax gourd	wgowmB678

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla019148	Watermelon (97103) v2	wmwmbB388
Cla019148	Watermelon (97103) v2	wmwmbB399
Cla019148	Wax gourd	wgowmB525
Cla019148	Wax gourd	wgowmB573
Cla019148	Watermelon (97103) v1	wmwmB136
Cla019148	Watermelon (97103) v1	wmwmB149
Cla019148	Cucumber (Gy14) v1	cgywmB129
Cla019148	Cucumber (Gy14) v1	cgywmB530
Cla019148	Cucumber (Gy14) v1	cgywmB620
Cla019148	Cucurbita maxima (Rimu)	cmawmB216
Cla019148	Cucurbita maxima (Rimu)	cmawmB403
Cla019148	Cucurbita maxima (Rimu)	cmawmB747
Cla019148	Cucurbita moschata (Rifu)	cmowmB204
Cla019148	Cucurbita moschata (Rifu)	cmowmB240
Cla019148	Cucurbita moschata (Rifu)	cmowmB397
Cla019148	Cucurbita moschata (Rifu)	cmowmB741
Cla019148	Melon (DHL92) v3.5.1	mewmB082
Cla019148	Melon (DHL92) v3.5.1	mewmB181
Cla019148	Watermelon (Charleston Gray)	wcgwmB170
Cla019148	Watermelon (Charleston Gray)	wcgwmB308
Cla019148	Cucumber (Chinese Long) v2	cuwmB086
Cla019148	Cucumber (Chinese Long) v2	cuwmB442
Cla019148	Cucurbita pepo (Zucchini)	cpewmB060
Cla019148	Cucurbita pepo (Zucchini)	cpewmB528
Cla019148	Cucurbita pepo (Zucchini)	cpewmB679
Cla019148	Bottle gourd (USVL1VR-Ls)	lsiwmB220
Cla019148	Bottle gourd (USVL1VR-Ls)	lsiwmB281
Cla019148	Cucumber (Gy14) v2	cgybwmB084
Cla019148	Melon (DHL92) v3.6.1	medwmB079
Cla019148	Melon (DHL92) v3.6.1	medwmB178
Cla019148	Melon (DHL92) v3.6.1	medwmB383
Cla019148	Silver-seed gourd	carwmB0356
Cla019148	Silver-seed gourd	carwmB0494
Cla019148	Silver-seed gourd	carwmB0613
Cla019148	Silver-seed gourd	carwmB1008
Cla019148	Cucumber (Chinese Long) v3	cucwmB096
Cla019148	Cucumber (Chinese Long) v3	cucwmB287