Cla018858 (gene) Watermelon (97103) v1

Overview
NameCla018858
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMacrophage migration inhibitory factor family protein (AHRD V1 ***- F4KAK0_ARATH); contains Interpro domain(s) IPR001398 Macrophage migration inhibitory factor
LocationChr6 : 22902243 .. 22903150 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGACTTTGAATTTATTCACGAATTTTCCAGTCGATACCGTCATGGCCGCTGACATTCTCAAGGACGCTTCGAAAGCCATTTCTAAAATTCTCGGGAAACCTGAATCTGTTAAGTTCTCTGTCCCTTCTCCATTCTCCCTCAGTCTATTGTTTGTATTGGGTATGCTCGTTTGCACAGTTCTGGACATGCCCACATTGTGTTCGACGAAATTACTACGAGAAAGTGAAAGTCATTTTAAGTTATTGAGTTGATATTTGCCATTGCTAGATTGATAGCCGACTTGAATTTCATTTTTCTTGTTGATCGATGGAATTTTTTTTTCCCTTAATTTATTTATTTGTATGGTGATAAGTAGATAGGCATTGGAAGCATATTTATTATTAAATTACTGGTTGACCCAAAAGTTTAAGTTGACGGGTGAATAGAAATATAATATCGTATTATCTATCATTCTCCCTCACTTGTAGGCTTGAATACCCAACAAGTGAAAAGCAATATTAATTGGAGGTTTGAACACAAGAACTCCCTGAATCATTACTATGATGCTATTTTAAATCACCGACTATTCAAAAATTTAAATTGATGGTGAAGTCAGATTTAATATTATATCATTTATGATAATGGGAGGGTATAAACTTAAAACTTACATTTTTCTGCTTCAATGTTTCAGTATGTGATGATCTTGCTGAATGGTGGTACCCCGATCGTTTTTGCTGGCACGGAAGAGCCAGCCGCGTATGGAGAATTGATCGCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCATCTTGATAGTTCCCGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTTTTTCTCGTCCTTCCAAAGTATCGTGA

mRNA sequence

ATGCCGACTTTGAATTTATTCACGAATTTTCCAGTCGATACCGTCATGGCCGCTGACATTCTCAAGGACGCTTCGAAAGCCATTTCTAAAATTCTCGGGAAACCTGAATCTGTTAAGTTCTCTGTCCCTTCTCCATTCTCCCTCAGTCTATTGTTTGTATTGGGTATGCTCGTTTGCACATATGTGATGATCTTGCTGAATGGTGGTACCCCGATCGTTTTTGCTGGCACGGAAGAGCCAGCCGCGTATGGAGAATTGATCGCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCATCTTGATAGTTCCCGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTTTTTCTCGTCCTTCCAAAGTATCGTGA

Coding sequence (CDS)

ATGCCGACTTTGAATTTATTCACGAATTTTCCAGTCGATACCGTCATGGCCGCTGACATTCTCAAGGACGCTTCGAAAGCCATTTCTAAAATTCTCGGGAAACCTGAATCTGTTAAGTTCTCTGTCCCTTCTCCATTCTCCCTCAGTCTATTGTTTGTATTGGGTATGCTCGTTTGCACATATGTGATGATCTTGCTGAATGGTGGTACCCCGATCGTTTTTGCTGGCACGGAAGAGCCAGCCGCGTATGGAGAATTGATCGCCATAGGAGGCCTTGGACCTGGCGTGAATGGAAAACTTAGCTCAACAATTGCTGAGATTCTTCAGACTAAGCTCCATCTTGATAGTTCCCGTTTCTATATCAAATTTTATGACGTTCAGGCAAGTTTTTCTCGTCCTTCCAAAGTATCGTGA

Protein sequence

MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCTYVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFYIKFYDVQASFSRPSKVS
Homology
[Close]
BLAST of Cla018858 vs. Swiss-Prot
Match: MIFH_BRUMA (Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=Bm1_28435 PE=3 SV=4)

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-12
Identity = 45/129 (34.88%), Postives = 66/129 (51.16%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP   + TN P +++ +A  LK AS  ++K LGKPES                       
Sbjct: 1   MPYFTIDTNIPQNSISSA-FLKKASNVVAKALGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV I +NGG  +VF G+E+P A   L +IG +GP VN   +  + ++L  +L +  +R Y
Sbjct: 61  YVSIHVNGGQAMVFGGSEDPCAVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCY 105

Query: 121 IKFYDVQAS 130
           I+F D++AS
Sbjct: 121 IEFVDIEAS 105

[Close]
BLAST of Cla018858 vs. Swiss-Prot
Match: MIFH_TRITR (Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 4.3e-12
Identity = 43/129 (33.33%), Postives = 62/129 (48.06%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP     TN P + + + D LK  SK I+ +LGKPES                       
Sbjct: 1   MPIFTFSTNVPSENI-SVDFLKSTSKLIAGMLGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV + +NGG  I F GT+ PA +G+L+++GG+G   N   S+ + + L   L +  +R Y
Sbjct: 61  YVAVHINGGQKITFGGTDAPAGFGQLLSLGGVGGEKNRSHSAKLFKHLTDGLGIPGNRMY 105

Query: 121 IKFYDVQAS 130
           I F D++ S
Sbjct: 121 INFVDMRGS 105

[Close]
BLAST of Cla018858 vs. Swiss-Prot
Match: MIFH_WUCBA (Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti GN=MIF PE=3 SV=3)

HSP 1 Score: 69.7 bits (169), Expect = 2.8e-11
Identity = 44/129 (34.11%), Postives = 64/129 (49.61%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP   + TN P D++ +A  LK A   + K LGKPES                       
Sbjct: 1   MPYFTIDTNKPQDSISSA-FLKKAPNVVPKALGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV I +NGG P+VF G+E+P     L +IG +GP VN   +  + ++L  +L +  +R Y
Sbjct: 61  YVSIHVNGGQPMVFGGSEDPCPVCVLKSIGCVGPKVNNSHAEKLYKLLADELKIPKNRCY 105

Query: 121 IKFYDVQAS 130
           I+  D++AS
Sbjct: 121 IESVDIEAS 105

[Close]
BLAST of Cla018858 vs. Swiss-Prot
Match: MIFH_TRISP (Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 37/126 (29.37%), Postives = 54/126 (42.86%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MP   L TN    T + +D L   S  +  IL KP S                       
Sbjct: 1   MPIFTLNTNIKA-TDVPSDFLSSTSALVGNILSKPGS----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YV + +N    + F G+ +PAA+G L++IGG+ P  N   S+ + + L  KL +  +R Y
Sbjct: 61  YVAVHINTDQQLSFGGSTKPAAFGTLMSIGGIEPSRNRDHSAKLFDHLNKKLGIPKNRMY 102

Query: 121 IKFYDV 127
           I F ++
Sbjct: 121 IHFVNL 102

[Close]
BLAST of Cla018858 vs. TrEMBL
Match: A0A0A0LXE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425910 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-42
Identity = 97/129 (75.19%), Postives = 101/129 (78.29%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+AADILKDASKA+SKILGKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGGTPIVFA TEEPAAYGELI+IGGLGPGVNGKLSSTIAEILQTKL +D SRFY
Sbjct: 61  YVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFY 106

Query: 121 IKFYDVQAS 130
           IKFYDVQ S
Sbjct: 121 IKFYDVQRS 106

[Close]
BLAST of Cla018858 vs. TrEMBL
Match: A0A151SRS7_CAJCA (Macrophage migration inhibitory factor isogeny OS=Cajanus cajan GN=KK1_003792 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 1.8e-41
Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNLPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEILQTKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIAFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

[Close]
BLAST of Cla018858 vs. TrEMBL
Match: V7CBI6_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G141000g PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.0e-41
Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEILQTKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIEFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

[Close]
BLAST of Cla018858 vs. TrEMBL
Match: I1LVL7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G100900 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.3e-41
Identity = 91/130 (70.00%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEIL+TKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIAFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILETKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

[Close]
BLAST of Cla018858 vs. TrEMBL
Match: A0A0B2QRA3_GLYSO (Macrophage migration inhibitory factor like OS=Glycine soja GN=glysoja_027547 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 5.3e-41
Identity = 91/130 (70.00%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEIL+TKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIAFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILETKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

[Close]
BLAST of Cla018858 vs. NCBI nr
Match: gi|449457199|ref|XP_004146336.1| (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 3.1e-42
Identity = 97/129 (75.19%), Postives = 101/129 (78.29%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+AADILKDASKA+SKILGKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGGTPIVFA TEEPAAYGELI+IGGLGPGVNGKLSSTIAEILQTKL +D SRFY
Sbjct: 61  YVMILLNGGTPIVFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKLQIDGSRFY 106

Query: 121 IKFYDVQAS 130
           IKFYDVQ S
Sbjct: 121 IKFYDVQRS 106

[Close]
BLAST of Cla018858 vs. NCBI nr
Match: gi|659107165|ref|XP_008453554.1| (PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo])

HSP 1 Score: 178.7 bits (452), Expect = 6.8e-42
Identity = 95/129 (73.64%), Postives = 101/129 (78.29%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+AADILKDASKA+SKILGKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVAADILKDASKAVSKILGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGGTPI+FA TEEPAAYGELI+IGGLGPGVNGKLSSTIAEILQTK+ +D SRFY
Sbjct: 61  YVMILLNGGTPIIFATTEEPAAYGELISIGGLGPGVNGKLSSTIAEILQTKIQIDGSRFY 106

Query: 121 IKFYDVQAS 130
           IKFYDVQ S
Sbjct: 121 IKFYDVQRS 106

[Close]
BLAST of Cla018858 vs. NCBI nr
Match: gi|1012346335|gb|KYP57527.1| (Macrophage migration inhibitory factor isogeny [Cajanus cajan])

HSP 1 Score: 176.8 bits (447), Expect = 2.6e-41
Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNLPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEILQTKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIAFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

[Close]
BLAST of Cla018858 vs. NCBI nr
Match: gi|593783335|ref|XP_007154708.1| (hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris])

HSP 1 Score: 175.6 bits (444), Expect = 5.8e-41
Identity = 92/130 (70.77%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEILQTKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIEFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILQTKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

[Close]
BLAST of Cla018858 vs. NCBI nr
Match: gi|734380054|gb|KHN22659.1| (Macrophage migration inhibitory factor like [Glycine soja])

HSP 1 Score: 175.3 bits (443), Expect = 7.6e-41
Identity = 91/130 (70.00%), Postives = 102/130 (78.46%), Query Frame = 1 

Query: 1   MPTLNLFTNFPVDTVMAADILKDASKAISKILGKPESVKFSVPSPFSLSLLFVLGMLVCT 60
           MPTLNLFTN PVDTV+A+DIL+DA+KA++KI+GKPES                       
Sbjct: 1   MPTLNLFTNVPVDTVVASDILRDATKAVAKIIGKPES----------------------- 60

Query: 61  YVMILLNGGTPIVFAGTEEPAAYGELIAIGGLGPGVNGKLSSTIAEILQTKLHLDSSRFY 120
           YVMILLNGG PI FAGTEEPAAYGELI+IGGLGP VNGKLSSTIAEIL+TKL++DSSRFY
Sbjct: 61  YVMILLNGGVPIAFAGTEEPAAYGELISIGGLGPSVNGKLSSTIAEILETKLYIDSSRFY 107

Query: 121 IKFYDVQASF 131
           IKFYDVQ SF
Sbjct: 121 IKFYDVQRSF 107

The following BLAST results are available for this feature:
BLAST of Cla018858 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIFH_BRUMA1.9e-1234.88Macrophage migration inhibitory factor homolog OS=Brugia malayi GN=Bm1_28435 PE=... [more]
MIFH_TRITR4.3e-1233.33Macrophage migration inhibitory factor homolog OS=Trichuris trichiura PE=1 SV=2[more]
MIFH_WUCBA2.8e-1134.11Macrophage migration inhibitory factor homolog OS=Wuchereria bancrofti GN=MIF PE... [more]
MIFH_TRISP1.6e-0629.37Macrophage migration inhibitory factor homolog OS=Trichinella spiralis PE=1 SV=2[more]
BLAST of Cla018858 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXE0_CUCSA2.1e-4275.19Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425910 PE=4 SV=1[more]
A0A151SRS7_CAJCA1.8e-4170.77Macrophage migration inhibitory factor isogeny OS=Cajanus cajan GN=KK1_003792 PE... [more]
V7CBI6_PHAVU4.0e-4170.77Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G141000g PE=4 SV=1[more]
I1LVL7_SOYBN5.3e-4170.00Uncharacterized protein OS=Glycine max GN=GLYMA_13G100900 PE=4 SV=1[more]
A0A0B2QRA3_GLYSO5.3e-4170.00Macrophage migration inhibitory factor like OS=Glycine soja GN=glysoja_027547 PE... [more]
BLAST of Cla018858 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457199|ref|XP_004146336.1|3.1e-4275.19PREDICTED: macrophage migration inhibitory factor homolog [Cucumis sativus][more]
gi|659107165|ref|XP_008453554.1|6.8e-4273.64PREDICTED: macrophage migration inhibitory factor homolog [Cucumis melo][more]
gi|1012346335|gb|KYP57527.1|2.6e-4170.77Macrophage migration inhibitory factor isogeny [Cajanus cajan][more]
gi|593783335|ref|XP_007154708.1|5.8e-4170.77hypothetical protein PHAVU_003G141000g [Phaseolus vulgaris][more]
gi|734380054|gb|KHN22659.1|7.6e-4170.00Macrophage migration inhibitory factor like [Glycine soja][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001398Macrophage_inhib_fac
IPR014347Tautomerase/MIF_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006558 L-phenylalanine metabolic process
biological_process GO:0006570 tyrosine metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016853 isomerase activity
molecular_function GO:0050178 phenylpyruvate tautomerase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU53413watermelon EST collection version 2.0transcribed_cluster
WMU55164watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018858Cla018858.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU55164WMU55164transcribed_cluster
WMU53413WMU53413transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001398Macrophage migration inhibitory factorPRODOMPD004816coord: 9..130
score: 8.0
IPR001398Macrophage migration inhibitory factorPANTHERPTHR11954MACROPHAGE MIGRATION INHIBITORY FACTOR RELATEDcoord: 2..37
score: 3.5E-36coord: 61..129
score: 3.5
IPR001398Macrophage migration inhibitory factorPFAMPF01187MIFcoord: 61..129
score: 2.5
IPR014347Tautomerase/MIF superfamilyunknownSSF55331Tautomerase/MIFcoord: 2..129
score: 1.35
NoneNo IPR availableGENE3DG3DSA:3.30.429.10coord: 1..129
score: 2.1
NoneNo IPR availablePANTHERPTHR11954:SF20MACROPHAGE MIGRATION INHIBITORY FACTOR FAMILY PROTEINcoord: 61..129
score: 3.5E-36coord: 2..37
score: 3.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla018858Cla97C06G123100Watermelon (97103) v2wmwmbB406
Cla018858Csa1G425910Cucumber (Chinese Long) v2cuwmB079
Cla018858MELO3C017426Melon (DHL92) v3.5.1mewmB289
Cla018858ClCG06G013630Watermelon (Charleston Gray)wcgwmB344
Cla018858CSPI01G20590Wild cucumber (PI 183967)cpiwmB087
Cla018858Cucsa.282120Cucumber (Gy14) v1cgywmB517
Cla018858CmaCh11G003600Cucurbita maxima (Rimu)cmawmB143
Cla018858CmoCh11G003630Cucurbita moschata (Rifu)cmowmB128
Cla018858Lsi06G012060Bottle gourd (USVL1VR-Ls)lsiwmB414
Cla018858Cp4.1LG04g13280Cucurbita pepo (Zucchini)cpewmB679
Cla018858CsGy1G020410Cucumber (Gy14) v2cgybwmB080
Cla018858MELO3C017426.2Melon (DHL92) v3.6.1medwmB283
Cla018858Carg09053Silver-seed gourdcarwmB0594
Cla018858CsaV3_1G031900Cucumber (Chinese Long) v3cucwmB092
Cla018858Bhi02G000538Wax gourdwgowmB684
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla018858Melon (DHL92) v3.6.1medwmB426
Cla018858Silver-seed gourdcarwmB0789
Cla018858Silver-seed gourdcarwmB0995
Cla018858Cucumber (Chinese Long) v3cucwmB181
Cla018858Watermelon (97103) v2wmwmbB392
Cla018858Watermelon (97103) v1wmwmB166
Cla018858Cucumber (Gy14) v1cgywmB109
Cla018858Cucurbita maxima (Rimu)cmawmB071
Cla018858Cucurbita maxima (Rimu)cmawmB180
Cla018858Cucurbita maxima (Rimu)cmawmB772
Cla018858Cucurbita moschata (Rifu)cmowmB063
Cla018858Cucurbita moschata (Rifu)cmowmB167
Cla018858Cucurbita moschata (Rifu)cmowmB766
Cla018858Melon (DHL92) v3.5.1mewmB440
Cla018858Watermelon (Charleston Gray)wcgwmB113
Cla018858Cucumber (Chinese Long) v2cuwmB170
Cla018858Cucurbita pepo (Zucchini)cpewmB129
Cla018858Cucurbita pepo (Zucchini)cpewmB372
Cla018858Cucurbita pepo (Zucchini)cpewmB820
Cla018858Bottle gourd (USVL1VR-Ls)lsiwmB121
Cla018858Cucumber (Gy14) v2cgybwmB160