Cla018835 (gene) Watermelon (97103) v1

Overview
NameCla018835
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionFeS assembly ATP-binding protein SufC (AHRD V1 *-*- C7JBP6_ACEP3); contains Interpro domain(s) IPR010230 ATPase SufC, SUF system FeS cluster assembly
LocationChr6 : 22588381 .. 22592977 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATGCCGCTCTTCATCCTCTACCACATCCGCTTCTCCTGTGGTTCGATATTTGCCGTCTAATTCTACTTCATCCATGATTTCCACCTTTTCCCCCCTCCCTTTCCGTTCCAATCGTCGCCGGTCAGTTCGAATTGCAACAGCTTCTCTCTCCGCGGTCAATTCTCCGTCTACGAGTTTCTCTGGCAGTCAGAAGAATCTTTTGCTGGAAGTCAAGGACTTGACTGCTGTAATTGCAGAATCCAAGCAGGAGATTCTCAAGGGTGTTAACCTTGTTGTCTACGAAGGGGAGGTTAGCTCAAATTAATCTCTTTTAGGATTGGATTCTCACAAGGTTTTGAATTTTTCATTGAATTTTTGTTCATTATATGATCTGGAATTATTTTTTCTGACCCTAGTAGGTTCACGCCATCATGGGAAAGAATGGTTCTGGAAAGAGCACATTTGCAAAGGTCAGTATTGTTTGTGTTCATTTCCCTAATTCTCATTAAAAAAAAAAAAATTTCTCGCGTTCCTTACAAGCAATGAGCTTTGATTTTAGAAGTTTATTCTCTTCCTTTGCTTCAATTTGCACTTGGAATCGGATTTTTTGCAGCTTATTTTAATTATTTAGTATAGTATAGTGCATGAAGCTCAATTACTATGGTTAAATGCAAGTTAAAGCTTTCATATCACATTATTATCATCCAAAGCCCAATTGCATTTAAACTTTCCATGAAATGTCTATTGATTGGTCTGCTCGTTTTGATTCAGCTCGTATCTAGCTTCTTCATGGTGTTCTCAATCCAAGTTTTTTTTGCTGATTATTTCATACAGTTTTATTTCTGCAGTTTAATTATGTCATTTTGTATTTTAATTTTATTAATTGTATCTTTTATTGTGAGCATTGGTCTCTCTTCTCTTCATTATACAAAAAGTATTGTTTCCTTTTTTTTTCAAAAAGAAAATATTACATGAAGCTCCTCCAATTTCACTGGAAACGAATCTACATCTGTCCTAGATTGAATTTTTCCTAGACAAAGGAAAGAGAAGGAAGGCATATACTGCCATCACAAACACATATGTATTAAATTATATTAGTCATCGAAATGTGTTACAATGGCCTCCCTGTTGTTGTTATCTGCTTGGAGATTGGACTTTTTTGTTTTATCCACTAAATTCAAGTGATGCTTTGTGGATTAAGGTACTTGTTGGGCACCCAGATTATGAGGTTACAGGCGGTAGTATTCTGTTTAAAGGAAGTGATTTGCTTGAAATGGAACCAGAAGAAAGGTCGCTTGCAGGGCTATTTATGAGTTTTCAGTCCCCGGTTGAGATTCCAGGTGTTAGCAACATTGACTTTCTAAATATGGCTTACAATGCACGGAGAAGGAAACTTGGTCTGGCAGAGCTGGGGCCAATTGAGGTATACATTTTCAATGGAAGGACCCATTTCTTGCTTTATCCATTCTCGGTTAAATGTGTACGTACTTATGGAGTAAGAATTCACATATGACTTTCTTTTGCATCTGCCATTTAGTGAAATGTTGTTTCTTTTGTTCATGCTATACAAACTTCCTCTAGATTAATGAAAATTTAGAAGTGGAGAAATTTCTTATTATTGAATTCCCCCGAAACAGCTTGTGAATTGCAGCCTTTTACCAAGCAATAGCGAACCAAACTGTCAAATCCTAAGATCTAAACTTTAACTGCAGTAAAACAACATTTAACAAAGCCTAAAGAACTTAACAAAGACCAGCCAAGAAACAGTTACAAAGACCCAAGATACCTCACAACAAATACAAGAAAGCTCTCAAGAAATACACTTTAAACTTCCTACCTCAAGATTACACAAAAAGAGGTGCAGAAGCCCACCGACAGTACAAAACAAAAAATGAAAATTTGCTTTTATTAATTTTTGTGTATATCCGTGAGTGTTTGAGCCAACTTATGCGCACCTCAAATAATCTCACGAGACAACCCGACTAACCCTACAACATTTGGGTGTCAAGTAAACTTGTAGGATATTAAATCCTTGGTAGTTGACCACCATGGATTGAATTCATGACCTCTTAGCCATTTATTGGGAGTATGTCTCTTTTTTTTCTACCACTAGGCCAACCCATGATGGTTTGCTTCTATTAAAATTAATAAAAGTTAACAAGATATGTTTGAATACCTGTGTGTGCTTAAGCTGATAGGCATCATGCAATCAAATCAGAGCCTGTGTTTTTATGTGAATCCAACCATTGGTCCATGCTTCAGCAATTACAAGGAGCAAGACAAAGAAGATTCAAGAGGCATTCACACGAGTGTCCTTGAGTAAGATTGCACCAAAAATTTAAGCCAACCTTTGCATCTTTGACCTAGTACCAGAAGTCTACCATTGAGTGATAAACACAATTGAAGGACGAAAAGGAGGAAAAGGAGCATTCAAAGAGGGATCAACAAAAAGGGAAGTTTGGGGCTGCCAAGAGAGGAGAGTCCGAGAACTCCAATACTAGAAAGAACCAAGCTTCAAAGAAGGTGAGGGAGAAGTCTAGCTCAATTTAATGTTGGAAGTGCAAGGGATTTGGACACAAGCAAAGATTGTGTCAATAAAAATGTCATGGTGATAAGAAATGAAATACTTGAATCGAAAAGCAAGGATTGTGTCAATAAAAATGTCATGGTGATAAGAAATGAAATACTTGATTCGAAAGATGAATGTGAAGAGCATGATGTACAACTTGAGGAAGAATTGGAAGCACAAGCTGATGAGTGCATTGTAGAAGGATCTCTAGCTTTACATTAATCAAGCATTGAGGGCGTTATCACATTTGTGTGGTTTTTTTTCCCTCTCTGGCCATAGTTCTCCAAGACCTTTAGGTATCAACAAAGGTTTCATCACATCCATTGGGAACACACAAACTAACAATATACCTGTAGGAAAAATCAAAATAGAATTGAGAAGAAACAAATAACAAAATTGAAACCCTACTATTCTCCAAATATCCTCACACTTGATTAGGTTTTGACGAAACCAAGTAGACAGACGGGTCAAAAAAAAAAAAAAAAAAGAAAAAGAAAAAGAAAAAAACTTAAGACAAATCCATGCAGCAAAACCCATGAGACAGACGGGTCCAAATATCCTCACACTTGTTTTTGTCAAACAACAATGGCTAAATATCTCTCCTGATTGCAACACTCCTCCTAAGGTTGATGGTGTCAACAAATGGCCACTCTAAGTTGGTGACCCAAACTTCAACCCTAGCCTAGACAGCAAAGTGTTAGGTATCTCCTCCACTACAATAGGAAACCCCAACAAGAAGTAACAGCATAGGGAAACAATCCCTGTTTTACTATTACAATAACACAACAATGGAATTATCAACCAAAAAGGTCTCTAGAATTCACAGATCAACCAAGAAGGAGAAAACAATAAAGAAAACGCTCCAACACATTTGAGAGAGTTGGAAATCCTCTCCTCAGCTTCAGCCTTTGGCCAAATTCTCCACAACCCACTCTGATGACTGGAATCCCTACAAAACCTTTTCCCTGGTCCCCACCTCCAACTAGCCACCTTCTATTGTCCTTTGACCCAATTGTCCCTTGTTCGTTTCCCATATTAACCCTACACGCCCAAGTATAACGAATTAGGGGCCGCACAAAATCCAAACTCTTAAAAGAAAATCCTAAAATCCTAAATGTGTCTTTTATCTGGTGCACTCTCCATATTTTACTCTTTGGATATTTCATTCATAAATGAAATGTTTCTTATAAAAAAAAATCCTAAAACTCTAACACCATGGACTCAATATTTAGATATGACTCATTGTATTTCAAGATAGAGAAACATATATATGGGTACACAAGAGAACTTTAATTTAAAGGAAAGTACAATTACAATAAAAGACAAGTAGAAATAATATATATTATAATCTGTCAATGTAGCATGAATGAAGACCTTTTGTTCAATCAAATTCCAAATTTCGGTTCAGATTCGTTGAAATCAAGTATCACTTTTCATTTTGCTTCATTCTTTACTGGAGTAGCTAGTTTCACATTGATTAGTCTACCTCTTGTAAATTGTAATTATTTAGTAATTTAAACTTTTGGCTAGTGATTCACTTCTTCATTATTGCTCCAGTTTTATGCATACATCTTCCCCAAACTTGATCTTGTGAACATGAAGACAGATTTTCTCAATCGAAATGTGAATGAAGGGTTTAGTGGTGGAGAAAGAAAGCGTAATGAGATCTTACAACTTGCGGTAAGTTTTCGTACTTTCCAGTGCTGTCTCGACATTGCTGATTTTATTTTGATTGGAACTAATGTTCCTCATATAAGTATACCAAGTGACATGGTACATATTATTTGTGTATTTATATTATGATTGTTGACGATCCTGATGCTGCATCTGAAGTTAGTTGGTGTGGGATTTGTCATTGTCTTTGGAAAGTAATATTGATAATATTGGCTTGGAAGATTTTTTCATTGAAGATCCGAGTGTCAATGTGTCATTATTCCAGAAAAGTGATAATGTCATTCCTCATTCAACTCCTCCGTCCGTGCCTGGCAAATTTGCTTCACTTATTGAAGCTTGTGGTCTTGAGGCACGTGCAATTCCTTCATGA

mRNA sequence

ATGGCATGCCGCTCTTCATCCTCTACCACATCCGCTTCTCCTGTGGTTCGATATTTGCCGTCTAATTCTACTTCATCCATGATTTCCACCTTTTCCCCCCTCCCTTTCCGTTCCAATCGTCGCCGGTCAGTTCGAATTGCAACAGCTTCTCTCTCCGCGGTCAATTCTCCGTCTACGAGTTTCTCTGGCAGTCAGAAGAATCTTTTGCTGGAAGTCAAGGACTTGACTGCTGTAATTGCAGAATCCAAGCAGGAGATTCTCAAGGGTGTTAACCTTGTTGTCTACGAAGGGGAGGTTCACGCCATCATGGGAAAGAATGGTTCTGGAAAGAGCACATTTGCAAAGGTACTTGTTGGGCACCCAGATTATGAGGTTACAGGCGGTAGTATTCTGTTTAAAGGAAGTGATTTGCTTGAAATGGAACCAGAAGAAAGGTCGCTTGCAGGGCTATTTATGAGTTTTCAGTCCCCGGTTGAGATTCCAGGTGTTAGCAACATTGACTTTCTAAATATGGCTTACAATGCACGGAGAAGGAAACTTGGTCTGGCAGAGCTGGGGCCAATTGAGTTTTATGCATACATCTTCCCCAAACTTGATCTTGTGAACATGAAGACAGATTTTCTCAATCGAAATGTGAATGAAGGGTTTAGTGGTGGAGAAAGAAAGCGTAATGAGATCTTACAACTTGCGTTGGTGTGGGATTTGTCATTGTCTTTGGAAAGTAATATTGATAATATTGGCTTGGAAGATTTTTTCATTGAAGATCCGAGTGTCAATGTGTCATTATTCCAGAAAAGTGATAATGTCATTCCTCATTCAACTCCTCCGTCCGTGCCTGGCAAATTTGCTTCACTTATTGAAGCTTGTGGTCTTGAGGCACGTGCAATTCCTTCATGA

Coding sequence (CDS)

ATGGCATGCCGCTCTTCATCCTCTACCACATCCGCTTCTCCTGTGGTTCGATATTTGCCGTCTAATTCTACTTCATCCATGATTTCCACCTTTTCCCCCCTCCCTTTCCGTTCCAATCGTCGCCGGTCAGTTCGAATTGCAACAGCTTCTCTCTCCGCGGTCAATTCTCCGTCTACGAGTTTCTCTGGCAGTCAGAAGAATCTTTTGCTGGAAGTCAAGGACTTGACTGCTGTAATTGCAGAATCCAAGCAGGAGATTCTCAAGGGTGTTAACCTTGTTGTCTACGAAGGGGAGGTTCACGCCATCATGGGAAAGAATGGTTCTGGAAAGAGCACATTTGCAAAGGTACTTGTTGGGCACCCAGATTATGAGGTTACAGGCGGTAGTATTCTGTTTAAAGGAAGTGATTTGCTTGAAATGGAACCAGAAGAAAGGTCGCTTGCAGGGCTATTTATGAGTTTTCAGTCCCCGGTTGAGATTCCAGGTGTTAGCAACATTGACTTTCTAAATATGGCTTACAATGCACGGAGAAGGAAACTTGGTCTGGCAGAGCTGGGGCCAATTGAGTTTTATGCATACATCTTCCCCAAACTTGATCTTGTGAACATGAAGACAGATTTTCTCAATCGAAATGTGAATGAAGGGTTTAGTGGTGGAGAAAGAAAGCGTAATGAGATCTTACAACTTGCGTTGGTGTGGGATTTGTCATTGTCTTTGGAAAGTAATATTGATAATATTGGCTTGGAAGATTTTTTCATTGAAGATCCGAGTGTCAATGTGTCATTATTCCAGAAAAGTGATAATGTCATTCCTCATTCAACTCCTCCGTCCGTGCCTGGCAAATTTGCTTCACTTATTGAAGCTTGTGGTCTTGAGGCACGTGCAATTCCTTCATGA

Protein sequence

MACRSSSSTTSASPVVRYLPSNSTSSMISTFSPLPFRSNRRRSVRIATASLSAVNSPSTSFSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVWDLSLSLESNIDNIGLEDFFIEDPSVNVSLFQKSDNVIPHSTPPSVPGKFASLIEACGLEARAIPS
Homology
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BLAST of Cla018835 vs. Swiss-Prot
Match: AB6I_ARATH (ABC transporter I family member 6, chloroplastic OS=Arabidopsis thaliana GN=ABCI6 PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 8.3e-77
Identity = 154/222 (69.37%), Postives = 183/222 (82.43%), Query Frame = 1 

Query: 35  PFRSNRRRSVRIATASLS-AVNSPSTSFSGSQKNL--LLEVKDLTAVIAESKQEILKGVN 94
           P     RRSV ++ +S+S AV+S S            LLEV+DL AVIAES+QEILKGVN
Sbjct: 54  PILRTTRRSVIVSASSVSSAVDSDSLVEDRDDVGRIPLLEVRDLRAVIAESRQEILKGVN 113

Query: 95  LVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLF 154
           LVVYEGEVHA+MGKNGSGKSTF+KVLVGHPDYEVTGGSI+FKG +LL+MEPE+RSLAGLF
Sbjct: 114 LVVYEGEVHAVMGKNGSGKSTFSKVLVGHPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLF 173

Query: 155 MSFQSPVEIPGVSNIDFLNMAYNARRRKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRN 214
           MSFQSPVEIPGVSN+DFLNMA+NAR+RKLG  EL PI+FY+++  KL++VNMKTDFLNRN
Sbjct: 174 MSFQSPVEIPGVSNMDFLNMAFNARKRKLGQPELDPIQFYSHLVSKLEVVNMKTDFLNRN 233

Query: 215 VNEGFSGGERKRNEILQLALVW-DLSL--SLESNIDNIGLED 251
           VNEGFSGGERKRNEILQLA++  +L++   ++S +D   L+D
Sbjct: 234 VNEGFSGGERKRNEILQLAVLGAELAILDEIDSGLDVDALQD 275

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BLAST of Cla018835 vs. Swiss-Prot
Match: ABCX_CYAPA (Probable ATP-dependent transporter ycf16 OS=Cyanophora paradoxa GN=ycf16 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.8e-56
Identity = 114/207 (55.07%), Postives = 148/207 (71.50%), Query Frame = 1 

Query: 64  SQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDY 123
           ++K  +LEVK+L A +  +  EILKGVNL +  GE+HAIMG NGSGKSTF+K+L GHP Y
Sbjct: 3   TEKTKILEVKNLKAQVDGT--EILKGVNLTINSGEIHAIMGPNGSGKSTFSKILAGHPAY 62

Query: 124 EVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGLA 183
           +VTGG ILFK  +LLE+EPEER+ AG+F++FQ P+EI GVSNIDFL +AYN RR++ GL 
Sbjct: 63  QVTGGEILFKNKNLLELEPEERARAGVFLAFQYPIEIAGVSNIDFLRLAYNNRRKEEGLT 122

Query: 184 ELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVWDLSLSLESNI 243
           EL P+ FY+ +  KL++V M   FLNRNVNEGFSGGE+KRNEILQ+AL+      L+   
Sbjct: 123 ELDPLTFYSIVKEKLNVVKMDPHFLNRNVNEGFSGGEKKRNEILQMALLNPSLAILDETD 182

Query: 244 DNIGLEDFFIEDPSVNVSLFQKSDNVI 271
             + ++   I    VN  L  K +++I
Sbjct: 183 SGLDIDALRIVAEGVN-QLSNKENSII 206

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BLAST of Cla018835 vs. Swiss-Prot
Match: Y075_SYNY3 (Probable ATP-dependent transporter slr0075 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0075 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 9.9e-54
Identity = 112/207 (54.11%), Postives = 149/207 (71.98%), Query Frame = 1 

Query: 69  LLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGG 128
           +L +K+LTA +     +ILKGVNL +  GEVHAIMG+NGSGKST +KV+ GHPDYE+TGG
Sbjct: 5   ILSIKNLTASV--DGNQILKGVNLEIKAGEVHAIMGRNGSGKSTLSKVITGHPDYEITGG 64

Query: 129 SILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGLAELGPI 188
            I+++G DL  +EP ER+LAG+F++FQ P+EIPGVSN+DFL +AYNA+R+ LGL EL   
Sbjct: 65  EIIYQGQDLSALEPHERALAGIFLAFQYPLEIPGVSNLDFLRIAYNAKRKHLGLEELDTF 124

Query: 189 EFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVWDLSLSLESNIDNIGL 248
           +F   I  KLD+V M   FL R++NEGFSGGE+KRNEILQ+A++ + +LS+   ID+ GL
Sbjct: 125 DFEDLIQEKLDVVKMNPAFLERSLNEGFSGGEKKRNEILQMAIL-EPTLSILDEIDS-GL 184

Query: 249 EDFFIEDPSVNVSLFQKSDN---VIPH 273
           +   +   S  V+  +  DN   VI H
Sbjct: 185 DIDALRIVSEGVNFLKNPDNATLVITH 207

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BLAST of Cla018835 vs. Swiss-Prot
Match: ABCX_PYRYE (Probable ATP-dependent transporter ycf16 OS=Pyropia yezoensis GN=ycf16 PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.4e-52
Identity = 110/202 (54.46%), Postives = 142/202 (70.30%), Query Frame = 1 

Query: 69  LLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGG 128
           +LE+KDL A + E+   ILKGVNL +  GE+HAIMG NGSGKST +KV+ GHP Y +  G
Sbjct: 5   ILEIKDLYASVGETT--ILKGVNLSIRAGEIHAIMGPNGSGKSTLSKVIAGHPAYSLISG 64

Query: 129 SILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGLAELGPI 188
            ILF G  +LE+EP+ER+ AG+F++FQ PVEIPGVSN DFL +A NARR+  GL+E  P+
Sbjct: 65  DILFFGQSILEIEPDERAKAGIFLAFQYPVEIPGVSNSDFLRIALNARRKFQGLSEFSPL 124

Query: 189 EFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVWDLSLSLESNIDNIGL 248
           EF+  I  K+DLV M+  FL RNVNEGFSGGE+KRNEILQ+AL+ D  +S+    D+ GL
Sbjct: 125 EFFQLITEKIDLVGMQESFLTRNVNEGFSGGEKKRNEILQMALL-DSKISILDETDS-GL 184

Query: 249 EDFFIEDPSVNVSLFQKSDNVI 271
           +   +   +  ++   KS N I
Sbjct: 185 DIDALRVVAKGINTLAKSTNSI 202

[Close]
BLAST of Cla018835 vs. Swiss-Prot
Match: ABCX_ODOSI (Probable ATP-dependent transporter ycf16 OS=Odontella sinensis GN=ycf16 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.6e-51
Identity = 107/202 (52.97%), Postives = 143/202 (70.79%), Query Frame = 1 

Query: 69  LLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGG 128
           +LE+K+L A I E+  EILK +NL +++GE+HAIMG NGSGKSTF+KVL GHP Y +  G
Sbjct: 7   ILEIKNLKACINEN--EILKDLNLKIHKGEIHAIMGPNGSGKSTFSKVLAGHPAYNILSG 66

Query: 129 SILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGLAELGPI 188
            ILFKGS +L ++PEERS  G+F++FQ P+EIPGVSN DFL +AYN++++ L   E+ PI
Sbjct: 67  DILFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNEDFLRLAYNSKQKFLNKDEVDPI 126

Query: 189 EFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVWDLSLSLESNIDNIGL 248
            F+  I  KL LV+M   FL+RNVNEGFSGGE+KRNEILQ+ L+ D  LS+    D+ GL
Sbjct: 127 SFFTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRNEILQMILL-DSELSILDETDS-GL 186

Query: 249 EDFFIEDPSVNVSLFQKSDNVI 271
           +   ++  S  ++ F   +  I
Sbjct: 187 DIDALKIISKGINTFMNQNKAI 204

[Close]
BLAST of Cla018835 vs. TrEMBL
Match: A0A0A0LXA8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423200 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.4e-110
Identity = 212/232 (91.38%), Postives = 221/232 (95.26%), Query Frame = 1 

Query: 1   MACRSSSSTTSASPVVRYLPSNSTSSMISTFSPLPFRSNRRRSVRIATASLSAVNSPSTS 60
           MA  SSS TTS + +V YLPSNST SM++TFS LPFR N RRSVRIATASLSAVNSPSTS
Sbjct: 13  MAYGSSSFTTSTTSLVPYLPSNSTLSMMTTFSHLPFRFNLRRSVRIATASLSAVNSPSTS 72

Query: 61  FSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 120
           FS SQK+LLLEVKDLTAVIAE+KQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH
Sbjct: 73  FSDSQKSLLLEVKDLTAVIAETKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 132

Query: 121 PDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 180
           PDYEVTGGSI+FKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL
Sbjct: 133 PDYEVTGGSIVFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 192

Query: 181 GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALV 233
           GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLA++
Sbjct: 193 GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAVL 244

[Close]
BLAST of Cla018835 vs. TrEMBL
Match: A0A097P9T8_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCI6 PE=2 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 4.0e-86
Identity = 181/262 (69.08%), Postives = 215/262 (82.06%), Query Frame = 1 

Query: 8   STTSASPVVRY-LPSNSTSSMI--STFSP-------LPFRSNRRRSVR---IATASLSAV 67
           S++  SP++R  LPS   +S++    FSP       L FRSN RR  R   + +A+LSAV
Sbjct: 10  SSSPPSPLLRSPLPSKLKTSLLYLPLFSPTASRSLSLRFRSNHRRPGRPFHLVSAALSAV 69

Query: 68  NSPSTSFSG---SQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKS 127
           +SP T+ S    S+K  LLEVK+LTAVIAE+ QEILKGVNLVV+EGEVHA+MGKNGSGKS
Sbjct: 70  DSPETTSSDGSDSEKKPLLEVKNLTAVIAETNQEILKGVNLVVHEGEVHAVMGKNGSGKS 129

Query: 128 TFAKVLVGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNM 187
           TF+KVLVGHPDYEVTGGS++FKG +LL+MEPEERSLAGLFMSFQSPVEIPGV+NIDFLNM
Sbjct: 130 TFSKVLVGHPDYEVTGGSVMFKGENLLDMEPEERSLAGLFMSFQSPVEIPGVNNIDFLNM 189

Query: 188 AYNARRRKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAL 247
           AYNARRRKL L ELGPIEFYAY+FPKL+LVNMK+DFLNRNVNEGFSGGERKRNEILQLA+
Sbjct: 190 AYNARRRKLALPELGPIEFYAYLFPKLELVNMKSDFLNRNVNEGFSGGERKRNEILQLAV 249

Query: 248 VW-DLSL--SLESNIDNIGLED 251
           +  DL++   ++S +D   L+D
Sbjct: 250 LGADLAMLDEIDSGLDIDALKD 271

[Close]
BLAST of Cla018835 vs. TrEMBL
Match: A0A067JUG0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20170 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 3.4e-85
Identity = 171/256 (66.80%), Postives = 208/256 (81.25%), Query Frame = 1 

Query: 5   SSSSTTSASPVVRYLPSNSTSSMISTFSPLPFR----SNRRRSVRIATASLSAVNSPS-- 64
           SS+     SP++    ++S +  + T   +PFR    ++RR S+ + +A+ SA N     
Sbjct: 11  SSTQPLVFSPLLSNFRTSSFNLRLFTHPAIPFRFHHSNHRRGSLHLISAAFSAANQTEIA 70

Query: 65  -TSFSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVL 124
            T    S+K  LLEVKDLTAVIAESKQEILKGVNLVV+EGE+HA+MGKNGSGKSTF+KVL
Sbjct: 71  GTDSRDSEKKPLLEVKDLTAVIAESKQEILKGVNLVVHEGEIHAVMGKNGSGKSTFSKVL 130

Query: 125 VGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARR 184
           VGHPDYEVTGGS++FKG +LL+MEPEERSL+GLFMSFQSPVEIPGV+NIDFLNMAYNARR
Sbjct: 131 VGHPDYEVTGGSVVFKGENLLDMEPEERSLSGLFMSFQSPVEIPGVNNIDFLNMAYNARR 190

Query: 185 RKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVW-DLS 244
           RKLGL ELGPIEFYAY+FPKL+LVNMK+DFLNRNVNEGFSGGERKRNEILQLA++  D++
Sbjct: 191 RKLGLPELGPIEFYAYLFPKLELVNMKSDFLNRNVNEGFSGGERKRNEILQLAVLGADMA 250

Query: 245 L--SLESNIDNIGLED 251
           +   ++S +D   L+D
Sbjct: 251 ILDEIDSGLDIDALKD 266

[Close]
BLAST of Cla018835 vs. TrEMBL
Match: B9HKI2_POPTR (ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0008s01320g PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 8.4e-84
Identity = 175/253 (69.17%), Postives = 202/253 (79.84%), Query Frame = 1 

Query: 19  LPSNSTSSMISTFSPLPFRSNRRRSVRIATASLSAVNSPSTSFSGS-QKNLLLEVKDLTA 78
           LP NS     S    L  RS RR  +   TAS+ AV +  T+ + S +K  LLEVKDLTA
Sbjct: 30  LPLNSNLFTYSATRSLRLRSTRR--LPAVTASVPAVETTGTTGTDSGKKRPLLEVKDLTA 89

Query: 79  VIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSILFKGSDL 138
           VIAESKQEILKGVN+V+YEGEVHAIMGKNGSGKSTF+KVL GHPDYEVTGGS++FKG +L
Sbjct: 90  VIAESKQEILKGVNVVLYEGEVHAIMGKNGSGKSTFSKVLAGHPDYEVTGGSVVFKGENL 149

Query: 139 LEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGLAELGPIEFYAYIFPK 198
           L+MEPEERSLAGLFMSFQSPVEIPGV+NIDFLNMAYNARRRKLGL ELGPIEFYAY+FPK
Sbjct: 150 LDMEPEERSLAGLFMSFQSPVEIPGVNNIDFLNMAYNARRRKLGLPELGPIEFYAYLFPK 209

Query: 199 LDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVWDLSLSLESNIDNIGLEDFFIEDPS 258
           L+LVNMK+DFLNRNVNEGFSGGERKRNEILQLA V    L++   ID+ GL+   ++D +
Sbjct: 210 LELVNMKSDFLNRNVNEGFSGGERKRNEILQLA-VLGAELAILDEIDS-GLDIDALQDVA 269

Query: 259 VNVSLFQKSDNVI 271
             V+     +N +
Sbjct: 270 KAVNGMLTPNNAV 278

[Close]
BLAST of Cla018835 vs. TrEMBL
Match: B9SCB8_RICCO (Abc transporter, putative OS=Ricinus communis GN=RCOM_0890970 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 1.4e-83
Identity = 174/256 (67.97%), Postives = 203/256 (79.30%), Query Frame = 1 

Query: 8   STTSASPVVRYLPSNSTSSMISTFSPLP---FRS--NRRR-----SVRIATASLSAVNSP 67
           S  S SP      S+S    +ST+   P   F S  NRRR     S+ +  A+LSA    
Sbjct: 7   SFLSQSPPSLQFKSSSLDLQLSTYPAAPTLRFPSIHNRRRRCCWRSLHLVNATLSAAVET 66

Query: 68  STSFSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVL 127
               +  +K  LLEVKDLTAVIAESKQEILKGVNLVV+EGEVHA+MGKNGSGKSTF+KVL
Sbjct: 67  IDGTASREKTPLLEVKDLTAVIAESKQEILKGVNLVVHEGEVHAVMGKNGSGKSTFSKVL 126

Query: 128 VGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARR 187
           VGHPDYEVTGGS++FKG +LL+MEPEERSLAGLFMSFQSPVEIPGV+NIDFLNMAYNARR
Sbjct: 127 VGHPDYEVTGGSVVFKGENLLDMEPEERSLAGLFMSFQSPVEIPGVNNIDFLNMAYNARR 186

Query: 188 RKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVW-DLS 247
           +KLGL ELGPIEFYAY+FPKL+LVNMK+DFLNRNVNEGFSGGE+KRNEILQLA++  DL+
Sbjct: 187 KKLGLPELGPIEFYAYLFPKLELVNMKSDFLNRNVNEGFSGGEKKRNEILQLAVLGADLA 246

Query: 248 L--SLESNIDNIGLED 251
           +   ++S +D   L+D
Sbjct: 247 ILDEIDSGLDIDALKD 262

[Close]
BLAST of Cla018835 vs. NCBI nr
Match: gi|449457167|ref|XP_004146320.1| (PREDICTED: ABC transporter I family member 6, chloroplastic [Cucumis sativus])

HSP 1 Score: 407.5 bits (1046), Expect = 2.0e-110
Identity = 212/232 (91.38%), Postives = 221/232 (95.26%), Query Frame = 1 

Query: 1   MACRSSSSTTSASPVVRYLPSNSTSSMISTFSPLPFRSNRRRSVRIATASLSAVNSPSTS 60
           MA  SSS TTS + +V YLPSNST SM++TFS LPFR N RRSVRIATASLSAVNSPSTS
Sbjct: 13  MAYGSSSFTTSTTSLVPYLPSNSTLSMMTTFSHLPFRFNLRRSVRIATASLSAVNSPSTS 72

Query: 61  FSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 120
           FS SQK+LLLEVKDLTAVIAE+KQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH
Sbjct: 73  FSDSQKSLLLEVKDLTAVIAETKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 132

Query: 121 PDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 180
           PDYEVTGGSI+FKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL
Sbjct: 133 PDYEVTGGSIVFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 192

Query: 181 GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALV 233
           GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLA++
Sbjct: 193 GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAVL 244

[Close]
BLAST of Cla018835 vs. NCBI nr
Match: gi|659107277|ref|XP_008453599.1| (PREDICTED: ABC transporter I family member 6, chloroplastic [Cucumis melo])

HSP 1 Score: 406.0 bits (1042), Expect = 5.7e-110
Identity = 211/232 (90.95%), Postives = 220/232 (94.83%), Query Frame = 1 

Query: 1   MACRSSSSTTSASPVVRYLPSNSTSSMISTFSPLPFRSNRRRSVRIATASLSAVNSPSTS 60
           MA  SSS TTS SP+V YLPS ST SM++TFS LP R NR RSVRIATASLSAVNSPSTS
Sbjct: 13  MAYGSSSFTTSTSPLVPYLPSKSTLSMMTTFSHLPLRFNRLRSVRIATASLSAVNSPSTS 72

Query: 61  FSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 120
           FS SQK++LLEVKDLTAVIAE+KQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH
Sbjct: 73  FSDSQKSVLLEVKDLTAVIAETKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGH 132

Query: 121 PDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 180
           PDYEVTGGSI+FKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL
Sbjct: 133 PDYEVTGGSIVFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL 192

Query: 181 GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALV 233
           GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLA++
Sbjct: 193 GLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAVL 244

[Close]
BLAST of Cla018835 vs. NCBI nr
Match: gi|1009119347|ref|XP_015876331.1| (PREDICTED: ABC transporter I family member 6, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 352.1 bits (902), Expect = 9.8e-94
Identity = 191/251 (76.10%), Postives = 210/251 (83.67%), Query Frame = 1 

Query: 5   SSSSTTSASPVVRYL-PSNSTSSMISTFSPLPFRSNR-RRSVRIATASLSAVNSPSTSFS 64
           SSSS TS+ P  RY  PSNS    ++   PLPFR+N  RR +   +ASLS  +SPSTS S
Sbjct: 21  SSSSATSSVPFTRYASPSNSLLFTLTATRPLPFRTNHARRHLTPLSASLSTFDSPSTSGS 80

Query: 65  GSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVLVGHPD 124
             +K LLLEVKDLTAVIAES +EILKGVNL VYEGEVHA+MGKNGSGKSTFAKVLVGHPD
Sbjct: 81  HGEKKLLLEVKDLTAVIAESGKEILKGVNLSVYEGEVHAVMGKNGSGKSTFAKVLVGHPD 140

Query: 125 YEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLGL 184
           YEVTGGS++FKG +LLEME EERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKL L
Sbjct: 141 YEVTGGSVVFKGENLLEMEAEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARRRKLNL 200

Query: 185 AELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVW-DLSL--SL 244
            ELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLA++  DLS+   +
Sbjct: 201 PELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLSILDEI 260

Query: 245 ESNIDNIGLED 251
           +S +D   L D
Sbjct: 261 DSGLDVDALRD 271

[Close]
BLAST of Cla018835 vs. NCBI nr
Match: gi|699262828|gb|AIU41656.1| (ABC transporter family protein [Hevea brasiliensis])

HSP 1 Score: 326.2 bits (835), Expect = 5.8e-86
Identity = 181/262 (69.08%), Postives = 215/262 (82.06%), Query Frame = 1 

Query: 8   STTSASPVVRY-LPSNSTSSMI--STFSP-------LPFRSNRRRSVR---IATASLSAV 67
           S++  SP++R  LPS   +S++    FSP       L FRSN RR  R   + +A+LSAV
Sbjct: 10  SSSPPSPLLRSPLPSKLKTSLLYLPLFSPTASRSLSLRFRSNHRRPGRPFHLVSAALSAV 69

Query: 68  NSPSTSFSG---SQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKS 127
           +SP T+ S    S+K  LLEVK+LTAVIAE+ QEILKGVNLVV+EGEVHA+MGKNGSGKS
Sbjct: 70  DSPETTSSDGSDSEKKPLLEVKNLTAVIAETNQEILKGVNLVVHEGEVHAVMGKNGSGKS 129

Query: 128 TFAKVLVGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNM 187
           TF+KVLVGHPDYEVTGGS++FKG +LL+MEPEERSLAGLFMSFQSPVEIPGV+NIDFLNM
Sbjct: 130 TFSKVLVGHPDYEVTGGSVMFKGENLLDMEPEERSLAGLFMSFQSPVEIPGVNNIDFLNM 189

Query: 188 AYNARRRKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLAL 247
           AYNARRRKL L ELGPIEFYAY+FPKL+LVNMK+DFLNRNVNEGFSGGERKRNEILQLA+
Sbjct: 190 AYNARRRKLALPELGPIEFYAYLFPKLELVNMKSDFLNRNVNEGFSGGERKRNEILQLAV 249

Query: 248 VW-DLSL--SLESNIDNIGLED 251
           +  DL++   ++S +D   L+D
Sbjct: 250 LGADLAMLDEIDSGLDIDALKD 271

[Close]
BLAST of Cla018835 vs. NCBI nr
Match: gi|802708455|ref|XP_012084503.1| (PREDICTED: ABC transporter I family member 6, chloroplastic [Jatropha curcas])

HSP 1 Score: 323.2 bits (827), Expect = 4.9e-85
Identity = 171/256 (66.80%), Postives = 208/256 (81.25%), Query Frame = 1 

Query: 5   SSSSTTSASPVVRYLPSNSTSSMISTFSPLPFR----SNRRRSVRIATASLSAVNSPS-- 64
           SS+     SP++    ++S +  + T   +PFR    ++RR S+ + +A+ SA N     
Sbjct: 11  SSTQPLVFSPLLSNFRTSSFNLRLFTHPAIPFRFHHSNHRRGSLHLISAAFSAANQTEIA 70

Query: 65  -TSFSGSQKNLLLEVKDLTAVIAESKQEILKGVNLVVYEGEVHAIMGKNGSGKSTFAKVL 124
            T    S+K  LLEVKDLTAVIAESKQEILKGVNLVV+EGE+HA+MGKNGSGKSTF+KVL
Sbjct: 71  GTDSRDSEKKPLLEVKDLTAVIAESKQEILKGVNLVVHEGEIHAVMGKNGSGKSTFSKVL 130

Query: 125 VGHPDYEVTGGSILFKGSDLLEMEPEERSLAGLFMSFQSPVEIPGVSNIDFLNMAYNARR 184
           VGHPDYEVTGGS++FKG +LL+MEPEERSL+GLFMSFQSPVEIPGV+NIDFLNMAYNARR
Sbjct: 131 VGHPDYEVTGGSVVFKGENLLDMEPEERSLSGLFMSFQSPVEIPGVNNIDFLNMAYNARR 190

Query: 185 RKLGLAELGPIEFYAYIFPKLDLVNMKTDFLNRNVNEGFSGGERKRNEILQLALVW-DLS 244
           RKLGL ELGPIEFYAY+FPKL+LVNMK+DFLNRNVNEGFSGGERKRNEILQLA++  D++
Sbjct: 191 RKLGLPELGPIEFYAYLFPKLELVNMKSDFLNRNVNEGFSGGERKRNEILQLAVLGADMA 250

Query: 245 L--SLESNIDNIGLED 251
           +   ++S +D   L+D
Sbjct: 251 ILDEIDSGLDIDALKD 266

The following BLAST results are available for this feature:
BLAST of Cla018835 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AB6I_ARATH8.3e-7769.37ABC transporter I family member 6, chloroplastic OS=Arabidopsis thaliana GN=ABCI... [more]
ABCX_CYAPA4.8e-5655.07Probable ATP-dependent transporter ycf16 OS=Cyanophora paradoxa GN=ycf16 PE=3 SV... [more]
Y075_SYNY39.9e-5454.11Probable ATP-dependent transporter slr0075 OS=Synechocystis sp. (strain PCC 6803... [more]
ABCX_PYRYE1.4e-5254.46Probable ATP-dependent transporter ycf16 OS=Pyropia yezoensis GN=ycf16 PE=3 SV=1[more]
ABCX_ODOSI4.6e-5152.97Probable ATP-dependent transporter ycf16 OS=Odontella sinensis GN=ycf16 PE=3 SV=... [more]
BLAST of Cla018835 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXA8_CUCSA1.4e-11091.38Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423200 PE=4 SV=1[more]
A0A097P9T8_HEVBR4.0e-8669.08ABC transporter family protein OS=Hevea brasiliensis GN=ABCI6 PE=2 SV=1[more]
A0A067JUG0_JATCU3.4e-8566.80Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20170 PE=4 SV=1[more]
B9HKI2_POPTR8.4e-8469.17ABC transporter family protein OS=Populus trichocarpa GN=POPTR_0008s01320g PE=4 ... [more]
B9SCB8_RICCO1.4e-8367.97Abc transporter, putative OS=Ricinus communis GN=RCOM_0890970 PE=4 SV=1[more]
BLAST of Cla018835 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457167|ref|XP_004146320.1|2.0e-11091.38PREDICTED: ABC transporter I family member 6, chloroplastic [Cucumis sativus][more]
gi|659107277|ref|XP_008453599.1|5.7e-11090.95PREDICTED: ABC transporter I family member 6, chloroplastic [Cucumis melo][more]
gi|1009119347|ref|XP_015876331.1|9.8e-9476.10PREDICTED: ABC transporter I family member 6, chloroplastic [Ziziphus jujuba][more]
gi|699262828|gb|AIU41656.1|5.8e-8669.08ABC transporter family protein [Hevea brasiliensis][more]
gi|802708455|ref|XP_012084503.1|4.9e-8566.80PREDICTED: ABC transporter I family member 6, chloroplastic [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR017871ABC_transporter_CS
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0016887ATPase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0006810 transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0010228 vegetative to reproductive phase transition of meristem
biological_process GO:0006569 tryptophan catabolic process
biological_process GO:0042793 transcription from plastid promoter
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006364 rRNA processing
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0019761 glucosinolate biosynthetic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0009793 embryo development ending in seed dormancy
biological_process GO:1902047 polyamine transmembrane transport
biological_process GO:0008150 biological_process
biological_process GO:0009684 indoleacetic acid biosynthetic process
biological_process GO:0016226 iron-sulfur cluster assembly
biological_process GO:0010207 photosystem II assembly
biological_process GO:0048481 plant ovule development
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0015417 polyamine-transporting ATPase activity
molecular_function GO:0016887 ATPase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005524 ATP binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU63249watermelon EST collection version 2.0transcribed_cluster
WMU67710watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018835Cla018835.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU67710WMU67710transcribed_cluster
WMU63249WMU63249transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 87..229
score: 8.7
IPR017871ABC transporter, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 216..230
scor
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 66..228
score: 1.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 69..229
score: 4.16
NoneNo IPR availableunknownCoilCoilcoord: 65..85
scor
NoneNo IPR availablePANTHERPTHR24220FAMILY NOT NAMEDcoord: 71..232
score: 6.3
NoneNo IPR availablePANTHERPTHR24220:SF85ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTICcoord: 71..232
score: 6.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla018835Cla97C06G122850Watermelon (97103) v2wmwmbB406
Cla018835Csa1G423200Cucumber (Chinese Long) v2cuwmB079
Cla018835MELO3C017456Melon (DHL92) v3.5.1mewmB289
Cla018835ClCG06G013410Watermelon (Charleston Gray)wcgwmB344
Cla018835CSPI01G20340Wild cucumber (PI 183967)cpiwmB087
Cla018835Cucsa.092560Cucumber (Gy14) v1cgywmB111
Cla018835Lsi06G011810Bottle gourd (USVL1VR-Ls)lsiwmB414
Cla018835CsGy1G020140Cucumber (Gy14) v2cgybwmB080
Cla018835MELO3C017456.2Melon (DHL92) v3.6.1medwmB283
Cla018835CsaV3_1G031660Cucumber (Chinese Long) v3cucwmB092
Cla018835Bhi02G000564Wax gourdwgowmB684
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla018835Melon (DHL92) v3.6.1medwmB426
Cla018835Silver-seed gourdcarwmB0062
Cla018835Silver-seed gourdcarwmB0594
Cla018835Silver-seed gourdcarwmB0789
Cla018835Silver-seed gourdcarwmB0995
Cla018835Cucumber (Chinese Long) v3cucwmB181
Cla018835Watermelon (97103) v2wmwmbB392
Cla018835Wax gourdwgowmB157
Cla018835Watermelon (97103) v1wmwmB166
Cla018835Cucumber (Gy14) v1cgywmB109
Cla018835Cucurbita maxima (Rimu)cmawmB071
Cla018835Cucurbita maxima (Rimu)cmawmB143
Cla018835Cucurbita maxima (Rimu)cmawmB180
Cla018835Cucurbita maxima (Rimu)cmawmB772
Cla018835Cucurbita moschata (Rifu)cmowmB063
Cla018835Cucurbita moschata (Rifu)cmowmB128
Cla018835Cucurbita moschata (Rifu)cmowmB167
Cla018835Cucurbita moschata (Rifu)cmowmB766
Cla018835Melon (DHL92) v3.5.1mewmB440
Cla018835Watermelon (Charleston Gray)wcgwmB113
Cla018835Cucumber (Chinese Long) v2cuwmB170
Cla018835Cucurbita pepo (Zucchini)cpewmB129
Cla018835Cucurbita pepo (Zucchini)cpewmB372
Cla018835Cucurbita pepo (Zucchini)cpewmB679
Cla018835Cucurbita pepo (Zucchini)cpewmB820
Cla018835Bottle gourd (USVL1VR-Ls)lsiwmB121
Cla018835Cucumber (Gy14) v2cgybwmB160