Cla018452 (gene) Watermelon (97103) v1

Overview
NameCla018452
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionProtection of telomeres 1 protein (AHRD V1 ***- B7T1J5_POPTR)
LocationChr4 : 22188929 .. 22190838 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCAACACTGGCAAATGGATGAAATTTATGAACGTCTTATGTGAAATGCAAGTTGGATCTTTCCAAATTGCAGTGACAACGTTTTCAAAGCTTCGTTATACATCGGATGAAGATAATGCCATACAATTGCGCCAAAGGTTAGCTTTCCATTATCTCATCTCAGACAAAATACACGTTAGACTCATGCTTCAATTTTTTACCCAAAAGTTTTGATACACTATCATCTCTAATTATTAGATCATATGAGGAGCGTTTAGCATCAGTCTTGGGGAGAATTCCTTTTTGGAGCTTTCCTTCACCTTCACCCATTACAGGTTTGAAGTTCTATTTCATGAAATTTTATTTTATTGCAATGGTTACTTTGATTTTGAGTTTTAACTGTCTCTGATAGATTAAATTTCACTTGGGATTTTTTCTGGTGGCAATTTGCTGATTATCTCGTTCCTTTAACAGAGGTTGATCACAATAATGAACCATTTGCCACATTGATGGATGTATTGACATATTCAAAGGTACTGCTTCTCTCTATCGCTGGTGGTGGTTGTTTGTTGGGAAGTTGCATTTTCTTGATGTTTTATGTACTTCACGGGATTTATATGTAGTGTAGCGTCTTTGCATCTTTCAATGCAAGTCAATGATCCTCAGCACAATTTTTCACGTGCTTGCTTGATTCACATTACGGTGATACACTTCTAGGGATGTTGAAGGTTCCATGAATGGTCTTTAGAATGAATGCGTGCTTACTTTTTTAGGTCTTATGTACCATTTCAATTGCTTTGATGGTCTATGTTCCTCCTCTGAGTTTGACTGTTTACTGGGGCGGGTTTAAGATTGCATCTCATTTTAATATATTGTTTCTGTTGTGGCAACTACTGCTTCCATAATTAGATTATATGGATGTATTCAGGAGAAAATTTGTTCTATCTCACATATTTCAAAATCTTTAATTATTTTTCTTGGTTATGCATTTGATGTCCACAGTAGTCACTTCCGGTGCATGCTATGTCCTCCGTCGTCCTTGTTGCACCCCTTCTGCAAACTGCTTGACCTTATTTCTTGATCGATGAAGTTTACACTTGACAGGTGACTGCAAAATTCAAATGTATAGTGCGAATCATAGCAATATATCCATTACAGGCCAAGGACTTCCGCTCTCCTGAAGGGACTTACCGGGTTAGGCTGTGCCTAGAAGATCCAACTGCAAGAATCCATGCCCTATTATATGCGGAGGATGGAGTAAGATTCCTTTTACCATTTGTACTGCATAATTTATACTACAAACATTCTGGGAATGTTTACTTCCGATTAACAGAGTATTTAGAAGAAAGGAAAATTGATGGTTTGGTTCCTTTTTATTCGCTTTTACTTAAATGTTTGATATGTATTCTTAAAGAACTTGGAAGAAAATTGTGCATCTGATTCCTTTTTGGGTGAAGGATGGAGGAAATTGTATCTGTGGCACGAGACAGTTAACAAACTTTCCATCATATTTGAAATGTTATGACATAGCAATACATTTCTTGCATTGGTTGCAATATAGTAGATGTGCATTTCTTTCCCTTGGTTCGTGAAGATAATAATTCCCTACAACATTGTGTTCGTGACTCCGTAGTATTGACTGTAGCAGTGTAGTTGTACTTCTTCGCATCCTTCTGATTGTGTTTTTCATGTTTGTTTGTCTTAATCCGCTCAAGTACAAATTCTTTGGTGGCTATCCGTCGATTGATACTTTAACGAGGAAACGAAACAAGCTACTTGGGGTTTCAGCAAGTGAGAAAAATGAGGCCAGTAGAAGAAATCCTCCATGGGTGCAGTGCTGCTTGAAATCTTATTATCTTAACAAACAGGACGTATGGGGAAGTAGACAGTACAGAATATTCAGCACTCGGCTGGTAGGAGAAGATTAA

mRNA sequence

ATGCTCAACACTGGCAAATGGATGAAATTTATGAACGTCTTATGTGAAATGCAAGTTGGATCTTTCCAAATTGCAGTGACAACGTTTTCAAAGCTTCGTTATACATCGGATGAAGATAATGCCATACAATTGCGCCAAAGATCATATGAGGAGCGTTTAGCATCAGTCTTGGGGAGAATTCCTTTTTGGAGCTTTCCTTCACCTTCACCCATTACAGAGGTTGATCACAATAATGAACCATTTGCCACATTGATGGATGTATTGACATATTCAAAGGTGACTGCAAAATTCAAATGTATAGTGCGAATCATAGCAATATATCCATTACAGGCCAAGGACTTCCGCTCTCCTGAAGGGACTTACCGGGTTAGGCTGTGCCTAGAAGATCCAACTGCAAGAATCCATGCCCTATTATATGCGGAGGATGGATACAAATTCTTTGGTGGCTATCCGTCGATTGATACTTTAACGAGGAAACGAAACAAGCTACTTGGGGTTTCAGCAAGTGAGAAAAATGAGGCCAGTAGAAGAAATCCTCCATGGGTGCAGTGCTGCTTGAAATCTTATTATCTTAACAAACAGGACGTATGGGGAAGTAGACAGTACAGAATATTCAGCACTCGGCTGGTAGGAGAAGATTAA

Coding sequence (CDS)

ATGCTCAACACTGGCAAATGGATGAAATTTATGAACGTCTTATGTGAAATGCAAGTTGGATCTTTCCAAATTGCAGTGACAACGTTTTCAAAGCTTCGTTATACATCGGATGAAGATAATGCCATACAATTGCGCCAAAGATCATATGAGGAGCGTTTAGCATCAGTCTTGGGGAGAATTCCTTTTTGGAGCTTTCCTTCACCTTCACCCATTACAGAGGTTGATCACAATAATGAACCATTTGCCACATTGATGGATGTATTGACATATTCAAAGGTGACTGCAAAATTCAAATGTATAGTGCGAATCATAGCAATATATCCATTACAGGCCAAGGACTTCCGCTCTCCTGAAGGGACTTACCGGGTTAGGCTGTGCCTAGAAGATCCAACTGCAAGAATCCATGCCCTATTATATGCGGAGGATGGATACAAATTCTTTGGTGGCTATCCGTCGATTGATACTTTAACGAGGAAACGAAACAAGCTACTTGGGGTTTCAGCAAGTGAGAAAAATGAGGCCAGTAGAAGAAATCCTCCATGGGTGCAGTGCTGCTTGAAATCTTATTATCTTAACAAACAGGACGTATGGGGAAGTAGACAGTACAGAATATTCAGCACTCGGCTGGTAGGAGAAGATTAA

Protein sequence

MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRIPFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGTYRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPPWVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED
Homology
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BLAST of Cla018452 vs. Swiss-Prot
Match: POT1A_ARATH (Protection of telomeres protein 1a OS=Arabidopsis thaliana GN=POT1A PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 5.6e-51
Identity = 99/209 (47.37%), Postives = 137/209 (65.55%), Query Frame = 1 

Query: 5   GKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRIPFWS 64
           G W+K  ++LCE+  GS+ I VT+ +K+ + + +D  ++   R Y++RL+S LG I FW 
Sbjct: 259 GDWVKLYHLLCEVDRGSWVIKVTSSTKVHHLAQDDRLVEKIMRIYDKRLSSKLGHISFWC 318

Query: 65  FPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT--YR 124
           FPSP  +TE D N  PF TLMD++T+ KVT K++CIVR++A YP Q +DF S E    ++
Sbjct: 319 FPSPPGLTETDDNCAPFVTLMDIITFPKVTCKYRCIVRVVAAYPWQVEDFCSDENRRHHQ 378

Query: 125 VRLCLEDPTARIHALLYAEDGYKFFG-GYPSIDTLTRKRNKLLGVSASEKNEASRRNPPW 184
           V L LED TA + A L  +D   F+G G+   +TL +KRN LLG+  S  N  + RNPPW
Sbjct: 379 VLLTLEDSTATLEAFLCNKDAEYFWGLGFQDTETLRKKRNWLLGIRES-SNFVAPRNPPW 438

Query: 185 VQCCLKSYYLNKQDVWGSRQYRIFSTRLV 211
           ++CC+ SYY NK D W +R YRIF TRL+
Sbjct: 439 IECCILSYYTNKADPWNTRLYRIFGTRLL 466

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BLAST of Cla018452 vs. Swiss-Prot
Match: POT1B_ARATH (Protection of telomeres protein 1b OS=Arabidopsis thaliana GN=POT1B PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.1e-38
Identity = 87/207 (42.03%), Postives = 119/207 (57.49%), Query Frame = 1 

Query: 2   LNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRIP 61
           L  G+ +K +N+  ++ +G +    T  +K++YT   +      QR   E+ +     I 
Sbjct: 246 LQPGQHVKLLNLFFQVNMGLWNATFTPSTKMQYTMSREMEAFSPQRMCGEKFSPRWNPIA 305

Query: 62  FWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGTY 121
                S S IT V H++ PF +LMD+LTY  VTAKF+C+VR I +YP   +  R   G  
Sbjct: 306 RCISRSHSEITGVAHDDAPFVSLMDILTYHNVTAKFRCVVRFIQVYPRDVRKLRDINGNI 365

Query: 122 RVRLCLEDPTARIHALLYAEDGYKFFGGYPS-IDTLTRKRNKLLGVSASEKNEASRRNPP 181
           ++   LED TARIHA LYA++G KFFG   S  + L +K N+LLG    E+ E   RNPP
Sbjct: 366 KLVAILEDATARIHASLYADEGEKFFGCDESDEEALVKKLNRLLG---GEEMEKVPRNPP 425

Query: 182 WVQCCLKSYYLNKQDVWGSRQYRIFST 208
           WVQCCL S+Y +K D W SR++RIF T
Sbjct: 426 WVQCCLFSFYKHKMDQWESRRFRIFDT 449

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BLAST of Cla018452 vs. TrEMBL
Match: A0A0A0LTS7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042840 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.0e-104
Identity = 186/213 (87.32%), Postives = 196/213 (92.02%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           MLNTGKWMKFMNVLCEMQVG+FQI VTTFSKLR+TS+ D A+Q RQRSYEERLASVLGRI
Sbjct: 248 MLNTGKWMKFMNVLCEMQVGTFQIVVTTFSKLRFTSNGDIAVQFRQRSYEERLASVLGRI 307

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           PFW FPSPS +TEVDHNNEPFATLMDVLTY K TAKFKC+VR+IA+YPLQAKDFRSPEG 
Sbjct: 308 PFWCFPSPSHVTEVDHNNEPFATLMDVLTYPKATAKFKCVVRVIAMYPLQAKDFRSPEGI 367

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           YRVRLCLEDPTARIHALLYAEDG +FFGGYPS D LTRKRNKLLGV ASEKNEAS R+PP
Sbjct: 368 YRVRLCLEDPTARIHALLYAEDGKQFFGGYPSSDALTRKRNKLLGVPASEKNEASTRDPP 427

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED 214
           WVQCCLKSYYLNKQDV GSRQYRIF TRLV ED
Sbjct: 428 WVQCCLKSYYLNKQDVLGSRQYRIFGTRLVVED 460

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BLAST of Cla018452 vs. TrEMBL
Match: B7T1J5_POPTR (Protection of telomeres 1 protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72
Identity = 132/212 (62.26%), Postives = 169/212 (79.72%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           +LNTG+W+KF+++LCE+  G +   +T F+KLRY S+ED+ +   QRSY ERL+  LGRI
Sbjct: 250 LLNTGEWVKFISILCEVHAGLWCGVLTPFTKLRYLSNEDHFVLACQRSYNERLSLKLGRI 309

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           P+W FP  S ITEVD+++ PF TLMDVLTYS+ TA+FKCI+R++A +P +A+DF S  GT
Sbjct: 310 PYWCFPWCSQITEVDYDHMPFVTLMDVLTYSEATARFKCIIRVVAAFPWRAEDF-SHHGT 369

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASR---R 180
           YR+RL +EDPTARIHA +YAEDG KFF G PSID LTRKR+KLLGV+A+   + +    R
Sbjct: 370 YRIRLTIEDPTARIHAFIYAEDGEKFFDGNPSIDVLTRKRDKLLGVAANNDGKGTNPASR 429

Query: 181 NPPWVQCCLKSYYLNKQDVWGSRQYRIFSTRL 210
           NPPWVQCCLKSYYL+K D+WGSRQYRIF T+L
Sbjct: 430 NPPWVQCCLKSYYLDKNDIWGSRQYRIFGTKL 460

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BLAST of Cla018452 vs. TrEMBL
Match: B9SWW0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0566130 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.1e-68
Identity = 130/211 (61.61%), Postives = 162/211 (76.78%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           +L TGKW+KF+N+LCE+  G ++  +T F+KL Y S+E+  I   Q+SY  RL++ LGRI
Sbjct: 242 LLGTGKWVKFLNILCEVHAGLWRGVLTGFTKLCYMSNENRLISACQKSYNARLSTELGRI 301

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           P+W FP  S ITEVD++N PF TLMDVLT SKVTAKFKCIVR++A +P QA+DF S  GT
Sbjct: 302 PYWCFPWCSNITEVDYDNVPFVTLMDVLTCSKVTAKFKCIVRVVAAFPWQAEDF-SHLGT 361

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           Y +RL +EDPTARIHA L+AEDG KFF GYPS + LT KRN LLGV   ++ E + RNPP
Sbjct: 362 YGIRLTIEDPTARIHAFLFAEDGEKFFDGYPSTNALTEKRNTLLGV--QKEIEGAPRNPP 421

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVG 212
           WVQCCLKSYYLN+ + WGSR +RIF T+ VG
Sbjct: 422 WVQCCLKSYYLNRNNTWGSRHFRIFGTKHVG 449

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BLAST of Cla018452 vs. TrEMBL
Match: A5AXJ2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014375 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 7.9e-68
Identity = 129/213 (60.56%), Postives = 160/213 (75.12%), Query Frame = 1 

Query: 1    MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
            +L  GKW++F+ ++CE+Q G ++  +   +KLRY  D D  +  RQR Y+ERL+S   R+
Sbjct: 1170 LLKVGKWVRFLKIICEVQAGLWRGVLMPSTKLRYMPDADLLVSQRQRFYDERLSSKWERM 1229

Query: 61   PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
            P  SFP PS ITE D+ + PF TLMDV+T+S+VTAKFKC+VR+ AI P +A+DF SP GT
Sbjct: 1230 PLSSFPWPSRITETDYEHVPFVTLMDVVTHSEVTAKFKCVVRVAAIVPWRAEDFCSPPGT 1289

Query: 121  YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEK-NEASR--R 180
            YR RL LEDPTARIHA +YAEDG KFF GYP +D L RKRNKLLG++ S+  NE +   R
Sbjct: 1290 YRTRLTLEDPTARIHAFVYAEDGEKFFEGYPPVDVLKRKRNKLLGIAESDDGNEINNAPR 1349

Query: 181  NPPWVQCCLKSYYLNKQDVWGSRQYRIFSTRLV 211
            NPPWVQCC+KSYYL K DVWGSR YRIF TRLV
Sbjct: 1350 NPPWVQCCIKSYYLVKGDVWGSRTYRIFGTRLV 1382

[Close]
BLAST of Cla018452 vs. TrEMBL
Match: W9RZQ3_9ROSA (Protection of telomeres protein 1 OS=Morus notabilis GN=L484_025176 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.9e-67
Identity = 124/211 (58.77%), Postives = 156/211 (73.93%), Query Frame = 1 

Query: 3   NTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRIPF 62
           N G+WMKF++V CE++ G ++  +T  +K+RYT ++D+ +  RQ  YE RL    GRIP+
Sbjct: 254 NVGEWMKFIDVHCEVRAGLWRGVLTPLTKVRYTPNKDHIVSERQSIYERRLHKRNGRIPY 313

Query: 63  WSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGTYR 122
           WSFP  S ITE+D+ + PF TLMDVLTY +VTAKF C VR++A YP Q KDF    G YR
Sbjct: 314 WSFPWMSHITEIDYKDVPFVTLMDVLTYPEVTAKFMCAVRVVAAYPWQGKDFCCSRGIYR 373

Query: 123 VRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASE---KNEASRRNP 182
           VRL LEDPT RIHA LY EDG +FFGGYP +D LTRKRN LLGV+  +   + + + RNP
Sbjct: 374 VRLTLEDPTGRIHAYLYGEDGEQFFGGYPPVDVLTRKRNALLGVATGDGVREIKDAPRNP 433

Query: 183 PWVQCCLKSYYLNKQDVWGSRQYRIFSTRLV 211
           PWVQCCLKSYYL+K DVWG+R YRIF T++V
Sbjct: 434 PWVQCCLKSYYLDKSDVWGTRHYRIFGTKVV 464

[Close]
BLAST of Cla018452 vs. NCBI nr
Match: gi|659066858|ref|XP_008464669.1| (PREDICTED: protection of telomeres protein 1a-like isoform X1 [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 4.7e-106
Identity = 190/213 (89.20%), Postives = 199/213 (93.43%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           MLNTGKWMKF+NVLCEMQVGSFQI VTTFSKLR+TS+ED A+Q RQRSYEERLAS LGRI
Sbjct: 248 MLNTGKWMKFVNVLCEMQVGSFQIVVTTFSKLRFTSNEDIAVQFRQRSYEERLASALGRI 307

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           PFW FPSPSPITEVD+NNEPF TLMDVLTYSKVTAKFKC+VR+IAIYPLQAKDFRSPEGT
Sbjct: 308 PFWCFPSPSPITEVDYNNEPFVTLMDVLTYSKVTAKFKCVVRVIAIYPLQAKDFRSPEGT 367

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           YRVRLCLEDPTARIHALLYAEDG +FFGGYPS D LTRKRNKLLGVSASEKNEAS R+PP
Sbjct: 368 YRVRLCLEDPTARIHALLYAEDGEQFFGGYPSNDALTRKRNKLLGVSASEKNEASTRDPP 427

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED 214
           WVQCCLKSYYLNKQDV GSRQYRIF TRL  ED
Sbjct: 428 WVQCCLKSYYLNKQDVLGSRQYRIFGTRLEVED 460

[Close]
BLAST of Cla018452 vs. NCBI nr
Match: gi|659066860|ref|XP_008464728.1| (PREDICTED: protection of telomeres protein 1a-like isoform X2 [Cucumis melo])

HSP 1 Score: 388.7 bits (997), Expect = 6.8e-105
Identity = 190/213 (89.20%), Postives = 199/213 (93.43%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           MLNTGKWMKF+NVLCEMQVGSFQI VTTFSKLR+TS+ED A+Q RQRSYEERLAS LGRI
Sbjct: 248 MLNTGKWMKFVNVLCEMQVGSFQIVVTTFSKLRFTSNEDIAVQFRQRSYEERLASALGRI 307

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           PFW FPSPSPITEVD+NNEPF TLMDVLTYSKVTAKFKC+VR+IAIYPLQAKDFRSPEGT
Sbjct: 308 PFWCFPSPSPITEVDYNNEPFVTLMDVLTYSKVTAKFKCVVRVIAIYPLQAKDFRSPEGT 367

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           YRVRLCLEDPTARIHALLYAEDG +FFGGYPS D LTRKRNKLLGVSASEKNEAS R+PP
Sbjct: 368 YRVRLCLEDPTARIHALLYAEDG-QFFGGYPSNDALTRKRNKLLGVSASEKNEASTRDPP 427

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED 214
           WVQCCLKSYYLNKQDV GSRQYRIF TRL  ED
Sbjct: 428 WVQCCLKSYYLNKQDVLGSRQYRIFGTRLEVED 459

[Close]
BLAST of Cla018452 vs. NCBI nr
Match: gi|778657395|ref|XP_011650821.1| (PREDICTED: protection of telomeres protein 1a-like isoform X3 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 5.7e-104
Identity = 186/213 (87.32%), Postives = 196/213 (92.02%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           MLNTGKWMKFMNVLCEMQVG+FQI VTTFSKLR+TS+ D A+Q RQRSYEERLASVLGRI
Sbjct: 160 MLNTGKWMKFMNVLCEMQVGTFQIVVTTFSKLRFTSNGDIAVQFRQRSYEERLASVLGRI 219

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           PFW FPSPS +TEVDHNNEPFATLMDVLTY K TAKFKC+VR+IA+YPLQAKDFRSPEG 
Sbjct: 220 PFWCFPSPSHVTEVDHNNEPFATLMDVLTYPKATAKFKCVVRVIAMYPLQAKDFRSPEGI 279

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           YRVRLCLEDPTARIHALLYAEDG +FFGGYPS D LTRKRNKLLGV ASEKNEAS R+PP
Sbjct: 280 YRVRLCLEDPTARIHALLYAEDGKQFFGGYPSSDALTRKRNKLLGVPASEKNEASTRDPP 339

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED 214
           WVQCCLKSYYLNKQDV GSRQYRIF TRLV ED
Sbjct: 340 WVQCCLKSYYLNKQDVLGSRQYRIFGTRLVVED 372

[Close]
BLAST of Cla018452 vs. NCBI nr
Match: gi|778657389|ref|XP_011650817.1| (PREDICTED: protection of telomeres protein 1a-like isoform X1 [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 5.7e-104
Identity = 186/213 (87.32%), Postives = 196/213 (92.02%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           MLNTGKWMKFMNVLCEMQVG+FQI VTTFSKLR+TS+ D A+Q RQRSYEERLASVLGRI
Sbjct: 248 MLNTGKWMKFMNVLCEMQVGTFQIVVTTFSKLRFTSNGDIAVQFRQRSYEERLASVLGRI 307

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           PFW FPSPS +TEVDHNNEPFATLMDVLTY K TAKFKC+VR+IA+YPLQAKDFRSPEG 
Sbjct: 308 PFWCFPSPSHVTEVDHNNEPFATLMDVLTYPKATAKFKCVVRVIAMYPLQAKDFRSPEGI 367

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           YRVRLCLEDPTARIHALLYAEDG +FFGGYPS D LTRKRNKLLGV ASEKNEAS R+PP
Sbjct: 368 YRVRLCLEDPTARIHALLYAEDGKQFFGGYPSSDALTRKRNKLLGVPASEKNEASTRDPP 427

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED 214
           WVQCCLKSYYLNKQDV GSRQYRIF TRLV ED
Sbjct: 428 WVQCCLKSYYLNKQDVLGSRQYRIFGTRLVVED 460

[Close]
BLAST of Cla018452 vs. NCBI nr
Match: gi|778657392|ref|XP_004137504.2| (PREDICTED: protection of telomeres protein 1a-like isoform X2 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 8.3e-103
Identity = 186/213 (87.32%), Postives = 196/213 (92.02%), Query Frame = 1 

Query: 1   MLNTGKWMKFMNVLCEMQVGSFQIAVTTFSKLRYTSDEDNAIQLRQRSYEERLASVLGRI 60
           MLNTGKWMKFMNVLCEMQVG+FQI VTTFSKLR+TS+ D A+Q RQRSYEERLASVLGRI
Sbjct: 248 MLNTGKWMKFMNVLCEMQVGTFQIVVTTFSKLRFTSNGDIAVQFRQRSYEERLASVLGRI 307

Query: 61  PFWSFPSPSPITEVDHNNEPFATLMDVLTYSKVTAKFKCIVRIIAIYPLQAKDFRSPEGT 120
           PFW FPSPS +TEVDHNNEPFATLMDVLTY K TAKFKC+VR+IA+YPLQAKDFRSPEG 
Sbjct: 308 PFWCFPSPSHVTEVDHNNEPFATLMDVLTYPKATAKFKCVVRVIAMYPLQAKDFRSPEGI 367

Query: 121 YRVRLCLEDPTARIHALLYAEDGYKFFGGYPSIDTLTRKRNKLLGVSASEKNEASRRNPP 180
           YRVRLCLEDPTARIHALLYAEDG +FFGGYPS D LTRKRNKLLGV ASEKNEAS R+PP
Sbjct: 368 YRVRLCLEDPTARIHALLYAEDG-QFFGGYPSSDALTRKRNKLLGVPASEKNEASTRDPP 427

Query: 181 WVQCCLKSYYLNKQDVWGSRQYRIFSTRLVGED 214
           WVQCCLKSYYLNKQDV GSRQYRIF TRLV ED
Sbjct: 428 WVQCCLKSYYLNKQDVLGSRQYRIFGTRLVVED 459

The following BLAST results are available for this feature:
BLAST of Cla018452 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POT1A_ARATH5.6e-5147.37Protection of telomeres protein 1a OS=Arabidopsis thaliana GN=POT1A PE=1 SV=1[more]
POT1B_ARATH7.1e-3842.03Protection of telomeres protein 1b OS=Arabidopsis thaliana GN=POT1B PE=1 SV=1[more]
BLAST of Cla018452 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTS7_CUCSA4.0e-10487.32Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042840 PE=4 SV=1[more]
B7T1J5_POPTR4.0e-7262.26Protection of telomeres 1 protein OS=Populus trichocarpa PE=2 SV=1[more]
B9SWW0_RICCO2.1e-6861.61Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0566130 PE=4 SV=1[more]
A5AXJ2_VITVI7.9e-6860.56Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014375 PE=4 SV=1[more]
W9RZQ3_9ROSA3.9e-6758.77Protection of telomeres protein 1 OS=Morus notabilis GN=L484_025176 PE=4 SV=1[more]
BLAST of Cla018452 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659066858|ref|XP_008464669.1|4.7e-10689.20PREDICTED: protection of telomeres protein 1a-like isoform X1 [Cucumis melo][more]
gi|659066860|ref|XP_008464728.1|6.8e-10589.20PREDICTED: protection of telomeres protein 1a-like isoform X2 [Cucumis melo][more]
gi|778657395|ref|XP_011650821.1|5.7e-10487.32PREDICTED: protection of telomeres protein 1a-like isoform X3 [Cucumis sativus][more]
gi|778657389|ref|XP_011650817.1|5.7e-10487.32PREDICTED: protection of telomeres protein 1a-like isoform X1 [Cucumis sativus][more]
gi|778657392|ref|XP_004137504.2|8.3e-10387.32PREDICTED: protection of telomeres protein 1a-like isoform X2 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000723telomere maintenance
Vocabulary: Molecular Function
TermDefinition
GO:0043047single-stranded telomeric DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000723 telomere maintenance
biological_process GO:0051974 negative regulation of telomerase activity
biological_process GO:0032210 regulation of telomere maintenance via telomerase
biological_process GO:0016233 telomere capping
cellular_component GO:0000784 nuclear chromosome, telomeric region
cellular_component GO:0005575 cellular_component
cellular_component GO:0000783 nuclear telomere cap complex
molecular_function GO:0043047 single-stranded telomeric DNA binding
molecular_function GO:0003677 DNA binding
molecular_function GO:0098505 G-rich strand telomeric DNA binding
molecular_function GO:0010521 telomerase inhibitor activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU46218watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018452Cla018452.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU46218WMU46218transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
No results