Cla018033 (gene) Watermelon (97103) v1

NameCla018033
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPentatricopeptide repeat-containing protein (AHRD V1 ***- D7LLK1_ARALL); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
LocationChr10 : 28136344 .. 28137831 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCTTCAGCGTTGTGAAGAGGAGCAACAACTTCCTCAGAAAACACAGGAACAGGCCATTTTCACCCTACAAAACCAAATGGCATCAGACCTTCCATCAGGACGAAGCTTTGCGAACCCTAAAACAAGCTGCAAATTCCCCCAAACCACCGAATTCCGACGAACCCTACCTTCTTTCCGCACTTATAACCTCCTTCAGAGCCTACTGCTGCCACCCAACCCCCAATGCCTACTACTTCGTTCTCAAAACCCTAGCTCGCACCTCCCAATTCCACCACATTGCCCCTGTTCTTGATCGCCTCCAACGCGTCGAGACATTCGAAACCCCAGAGTACGTATTTGTCGACCTCATCAAAGTTTACGGACGAATCGACAGAATTCAAGATGCCATCTCTCTTTTTCGTAGGATTCCTATGTTTAGGTGCGTTCCTTCTACGCTTTCACTCAATTCTTTACTTTTCCTGCTCTGTAGAAATGGTGAAGGCCTTCGAATAGTTCCTGAGATCATATTGCATAGTCAGACTATGGGTATTAGGCTTGAAGACTCCACTTTTCGGATACTAATTGCTGCGTTGTGTAAAATTAATAAAGTTGGGCATGCAATGGAGATTTTCAATTATATGATAACTGAGGGGTATGGTCTGAATCCACGAATCTGCTCTTTGATATTGGCATCGCTGTGCGAACAAAAGGAAACCTCTGGTGATGTGGTGCTTAGCTTTCTGGAGGAAATGAGGCAAAAAGGATTCTGTCCTGTTGTTGTAGATTATTCTAATGTAATTAAGTTCTTCGTTACGAGAGGGATGAGTTCAGATGCTCTCGTTCTATTGAATAAAATGAAGGCCGATGGTTTTAAGCCTGATATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATAAGATGGCAGATGAACTGTTTGATGAATTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACATACAACGTGTACATACATGGATTATGCAAACAAGGTAATTCGGAAGCGGGGATTCAAATGATTTCGCATATGGAGGAATTGGGGTGCAAACCTAATGTGATTACTTACAATATTCTATTGGAAAGTTTGTGTAAAACCGGTGAACTTAATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCAATGGTTTATTTCAAAATGGTGATGTTATTGAAGCATGTGTCCTATTGGAGGAAATGCTAGGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTGGTGAGATACTTTCTTGGTTGTGCAAAAGGGACATGGTAGGCAAAGCACTTGAGTTGCTCACGTTAATGGTACGAAAGAACTTTTTCCCAGGTCCTAAGGCCTGGGAAATACTGCTCCTGAGCTCTGAAATTGAACTAACCTCTCTTAAGAGCCTTGAAACTACTTTAGAAGATATACTAGGCATCTGA

mRNA sequence

ATGGCAAGCTTCAGCGTTGTGAAGAGGAGCAACAACTTCCTCAGAAAACACAGGAACAGGCCATTTTCACCCTACAAAACCAAATGGCATCAGACCTTCCATCAGGACGAAGCTTTGCGAACCCTAAAACAAGCTGCAAATTCCCCCAAACCACCGAATTCCGACGAACCCTACCTTCTTTCCGCACTTATAACCTCCTTCAGAGCCTACTGCTGCCACCCAACCCCCAATGCCTACTACTTCGTTCTCAAAACCCTAGCTCGCACCTCCCAATTCCACCACATTGCCCCTGTTCTTGATCGCCTCCAACGCGTCGAGACATTCGAAACCCCAGAGTACGTATTTGTCGACCTCATCAAAGTTTACGGACGAATCGACAGAATTCAAGATGCCATCTCTCTTTTTCGTAGGATTCCTATGTTTAGGTGCGTTCCTTCTACGCTTTCACTCAATTCTTTACTTTTCCTGCTCTGTAGAAATGGTGAAGGCCTTCGAATAGTTCCTGAGATCATATTGCATAGTCAGACTATGGGTATTAGGCTTGAAGACTCCACTTTTCGGATACTAATTGCTGCGTTGTGTAAAATTAATAAAGTTGGGCATGCAATGGAGATTTTCAATTATATGATAACTGAGGGGTATGGTCTGAATCCACGAATCTGCTCTTTGATATTGGCATCGCTGTGCGAACAAAAGGAAACCTCTGGTGATGTGGTGCTTAGCTTTCTGGAGGAAATGAGGCAAAAAGGATTCTGTCCTGTTGTTGTAGATTATTCTAATGTAATTAAGTTCTTCGTTACGAGAGGGATGAGTTCAGATGCTCTCGTTCTATTGAATAAAATGAAGGCCGATGGTTTTAAGCCTGATATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATAAGATGGCAGATGAACTGTTTGATGAATTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACATACAACGTGTACATACATGGATTATGCAAACAAGGTAATTCGGAAGCGGGGATTCAAATGATTTCGCATATGGAGGAATTGGGGTGCAAACCTAATGTGATTACTTACAATATTCTATTGGAAAGTTTGTGTAAAACCGGTGAACTTAATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCAATGGTTTATTTCAAAATGGTGATGTTATTGAAGCATGTGTCCTATTGGAGGAAATGCTAGGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTGGTGAGATACTTTCTTGGTTGTGCAAAAGGGACATGGTAGGCAAAGCACTTGAGTTGCTCACGTTAATGGTACGAAAGAACTTTTTCCCAGGTCCTAAGGCCTGGGAAATACTGCTCCTGAGCTCTGAAATTGAACTAACCTCTCTTAAGAGCCTTGAAACTACTTTAGAAGATATACTAGGCATCTGA

Coding sequence (CDS)

ATGGCAAGCTTCAGCGTTGTGAAGAGGAGCAACAACTTCCTCAGAAAACACAGGAACAGGCCATTTTCACCCTACAAAACCAAATGGCATCAGACCTTCCATCAGGACGAAGCTTTGCGAACCCTAAAACAAGCTGCAAATTCCCCCAAACCACCGAATTCCGACGAACCCTACCTTCTTTCCGCACTTATAACCTCCTTCAGAGCCTACTGCTGCCACCCAACCCCCAATGCCTACTACTTCGTTCTCAAAACCCTAGCTCGCACCTCCCAATTCCACCACATTGCCCCTGTTCTTGATCGCCTCCAACGCGTCGAGACATTCGAAACCCCAGAGTACGTATTTGTCGACCTCATCAAAGTTTACGGACGAATCGACAGAATTCAAGATGCCATCTCTCTTTTTCGTAGGATTCCTATGTTTAGGTGCGTTCCTTCTACGCTTTCACTCAATTCTTTACTTTTCCTGCTCTGTAGAAATGGTGAAGGCCTTCGAATAGTTCCTGAGATCATATTGCATAGTCAGACTATGGGTATTAGGCTTGAAGACTCCACTTTTCGGATACTAATTGCTGCGTTGTGTAAAATTAATAAAGTTGGGCATGCAATGGAGATTTTCAATTATATGATAACTGAGGGGTATGGTCTGAATCCACGAATCTGCTCTTTGATATTGGCATCGCTGTGCGAACAAAAGGAAACCTCTGGTGATGTGGTGCTTAGCTTTCTGGAGGAAATGAGGCAAAAAGGATTCTGTCCTGTTGTTGTAGATTATTCTAATGTAATTAAGTTCTTCGTTACGAGAGGGATGAGTTCAGATGCTCTCGTTCTATTGAATAAAATGAAGGCCGATGGTTTTAAGCCTGATATTGTTTGTTATACTATGGTCTTGAATGGGGTGATTGCGGATGGGGATTATAAGATGGCAGATGAACTGTTTGATGAATTGCTTCTCTTTGGTTTAGTTCCTGATATTTATACATACAACGTGTACATACATGGATTATGCAAACAAGGTAATTCGGAAGCGGGGATTCAAATGATTTCGCATATGGAGGAATTGGGGTGCAAACCTAATGTGATTACTTACAATATTCTATTGGAAAGTTTGTGTAAAACCGGTGAACTTAATGAGGCAAGGAAGCTTCGAAGTAAGATGCAACTAAAGGGTCTGGCAGAAAACTTGCGGACTTTTAGGATTATGATCAATGGTTTATTTCAAAATGGTGATGTTATTGAAGCATGTGTCCTATTGGAGGAAATGCTAGGAAGTCGTTTCCCTCCTCAGATTTCAACTTTTGGTGAGATACTTTCTTGGTTGTGCAAAAGGGACATGGTAGGCAAAGCACTTGAGTTGCTCACGTTAATGGTACGAAAGAACTTTTTCCCAGGTCCTAAGGCCTGGGAAATACTGCTCCTGAGCTCTGAAATTGAACTAACCTCTCTTAAGAGCCTTGAAACTACTTTAGAAGATATACTAGGCATCTGA

Protein sequence

MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYLLSALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIELTSLKSLETTLEDILGI
BLAST of Cla018033 vs. Swiss-Prot
Match: PP193_ARATH (Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidopsis thaliana GN=At2g38420 PE=2 SV=2)

HSP 1 Score: 392.9 bits (1008), Expect = 5.2e-108
Identity = 204/457 (44.64%), Postives = 304/457 (66.52%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYLL 60
           MA  S   R +NF+RK+R  P S +KTKW++   Q  A+  L+    S    +S+   ++
Sbjct: 1   MARSSSWHRMSNFMRKYRKIPHSSFKTKWNENLKQKYAMEELR----SNLLTDSENASVM 60

Query: 61  SALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIK 120
             L++SF+ + C PTP AY FV+KTLA++SQ  +I+ VL  L+  E F+TPE +F D+I 
Sbjct: 61  RTLLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIA 120

Query: 121 VYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIR 180
            YG   RI++AI +F +IP FRCVPS  +LN+LL +L R  + L +VPEI++ +  MG+R
Sbjct: 121 AYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVR 180

Query: 181 LEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVL 240
           LE+STF ILI ALC+I +V  A E+  YM  +   ++PR+ S +L+S+C+ K++S   V+
Sbjct: 181 LEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVI 240

Query: 241 SFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGV 300
            +LE++R+  F P + DY+ V++F V  G   + + +LN+MK D  +PD+VCYT+VL GV
Sbjct: 241 GYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGV 300

Query: 301 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNV 360
           IAD DY  AD+LFDELLL GL PD+YTYNVYI+GLCKQ + E  ++M+S M +LG +PNV
Sbjct: 301 IADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNV 360

Query: 361 ITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEE 420
           +TYNIL+++L K G+L+ A+ L  +M+  G+  N  TF IMI+   +  +V+ A  LLEE
Sbjct: 361 VTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE 420

Query: 421 MLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMV 458
                   + S   E++S LC++ ++ +A+ELL  +V
Sbjct: 421 AFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453

BLAST of Cla018033 vs. Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.0e-39
Identity = 102/395 (25.82%), Postives = 192/395 (48.61%), Query Frame = 1

Query: 74  PTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFET--PEYVFVDLIKVYGRIDRIQDA 133
           P  + +  ++K L R    H + P +  L+ + ++     E  F  +++ Y     +  A
Sbjct: 187 PDVSTFNVLIKALCRA---HQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 246

Query: 134 ISLFRRIPMFRCVPSTLSLNSLLFLLCRNG---EGLRIVPEIILHSQTMGIRLEDSTFRI 193
           + +  ++  F C  S +S+N ++   C+ G   + L  + E+   S   G   +  TF  
Sbjct: 247 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM---SNQDGFFPDQYTFNT 306

Query: 194 LIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQ 253
           L+  LCK   V HA+EI + M+ EGY  +    + +++ LC+  E    V +  L++M  
Sbjct: 307 LVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV--LDQMIT 366

Query: 254 KGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKM 313
           +   P  V Y+ +I          +A  L   + + G  PD+  +  ++ G+    ++++
Sbjct: 367 RDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV 426

Query: 314 ADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLE 373
           A ELF+E+   G  PD +TYN+ I  LC +G  +  + M+  ME  GC  +VITYN L++
Sbjct: 427 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLID 486

Query: 374 SLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPP 433
             CK  +  EA ++  +M++ G++ N  T+  +I+GL ++  V +A  L+++M+     P
Sbjct: 487 GFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKP 546

Query: 434 QISTFGEILSWLCKRDMVGKALELLTLMVRKNFFP 464
              T+  +L+  C+   + KA +++  M      P
Sbjct: 547 DKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573


HSP 2 Score: 157.9 bits (398), Expect = 2.8e-37
Identity = 111/385 (28.83%), Postives = 182/385 (47.27%), Query Frame = 1

Query: 74  PTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAIS 133
           P P  Y  +L  L R+  F  +  +L+ ++     E     F+ LI+ Y + +   + +S
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRC-EMGTSTFLILIESYAQFELQDEILS 140

Query: 134 LFR-RIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRILIAA 193
           +    I  F   P T   N +L LL  +G  L++V          GI+ + STF +LI A
Sbjct: 141 VVDWMIDEFGLKPDTHFYNRMLNLLV-DGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 200

Query: 194 LCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFC 253
           LC+ +++  A+ +   M + G   + +  + ++    E+ +  G   L   E+M + G  
Sbjct: 201 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG--ALRIREQMVEFGCS 260

Query: 254 PVVVDYSNVIKFFVTRGMSSDALVLLNKMK-ADGFKPDIVCYTMVLNGVIADGDYKMADE 313
              V  + ++  F   G   DAL  + +M   DGF PD   +  ++NG+   G  K A E
Sbjct: 261 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 320

Query: 314 LFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLC 373
           + D +L  G  PD+YTYN  I GLCK G  +  ++++  M    C PN +TYN L+ +LC
Sbjct: 321 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 380

Query: 374 KTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQIS 433
           K  ++ EA +L   +  KG+  ++ TF  +I GL    +   A  L EEM      P   
Sbjct: 381 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 440

Query: 434 TFGEILSWLCKRDMVGKALELLTLM 457
           T+  ++  LC +  + +AL +L  M
Sbjct: 441 TYNMLIDSLCSKGKLDEALNMLKQM 461


HSP 3 Score: 154.1 bits (388), Expect = 4.1e-36
Identity = 104/422 (24.64%), Postives = 203/422 (48.10%), Query Frame = 1

Query: 76  PNAYYF--VLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAIS 135
           P+ Y F  ++  L +     H   ++D + + E ++   Y +  +I    ++  +++A+ 
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQ-EGYDPDVYTYNSVISGLCKLGEVKEAVE 352

Query: 136 LFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRILIAAL 195
           +  ++    C P+T++ N+L+  LC+  + +    E+     + GI  +  TF  LI  L
Sbjct: 353 VLDQMITRDCSPNTVTYNTLISTLCKENQ-VEEATELARVLTSKGILPDVCTFNSLIQGL 412

Query: 196 CKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCP 255
           C       AME+F  M ++G   +    ++++ SLC + +   D  L+ L++M   G   
Sbjct: 413 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL--DEALNMLKQMELSGCAR 472

Query: 256 VVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELF 315
            V+ Y+ +I  F     + +A  + ++M+  G   + V Y  +++G+      + A +L 
Sbjct: 473 SVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM 532

Query: 316 DELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKT 375
           D++++ G  PD YTYN  +   C+ G+ +    ++  M   GC+P+++TY  L+  LCK 
Sbjct: 533 DQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKA 592

Query: 376 GELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEML-GSRFPPQIST 435
           G +  A KL   +Q+KG+      +  +I GLF+     EA  L  EML  +  PP   +
Sbjct: 593 GRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVS 652

Query: 436 FGEILSWLCK-RDMVGKALELLTLMVRKNFFPGPKAWEIL---LLSSEIELTSLKSLETT 491
           +  +   LC     + +A++ L  ++ K F P   +  +L   LL+  +E T +K +   
Sbjct: 653 YRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMV 710


HSP 4 Score: 70.5 bits (171), Expect = 5.9e-11
Identity = 67/256 (26.17%), Postives = 112/256 (43.75%), Query Frame = 1

Query: 224 ILASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKA 283
           +L SL  Q + S  + L  L   ++  F P    Y  ++      G   D   +L  MK+
Sbjct: 53  LLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKS 112

Query: 284 DGFKPDIVCYTMVLNGV----IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQG 343
              +     + +++       + D    + D + DE   FGL PD + YN  ++ L   G
Sbjct: 113 SRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDE---FGLKPDTHFYNRMLN-LLVDG 172

Query: 344 NSEAGIQMISH--MEELGCKPNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRT 403
           NS   ++ ISH  M   G KP+V T+N+L+++LC+  +L  A  +   M   GL  + +T
Sbjct: 173 NSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 232

Query: 404 FRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMV 463
           F  ++ G  + GD+  A  + E+M+         +   I+   CK   V  AL  +  M 
Sbjct: 233 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 292

Query: 464 RKN-FFPGPKAWEILL 473
            ++ FFP    +  L+
Sbjct: 293 NQDGFFPDQYTFNTLV 302

BLAST of Cla018033 vs. Swiss-Prot
Match: PP247_ARATH (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.8e-39
Identity = 102/368 (27.72%), Postives = 180/368 (48.91%), Query Frame = 1

Query: 108 FETPEYVFVDLIKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNG---EGL 167
           +E     F  L+  +    R+ +A++L  R+   +  P  +++++L+  LC  G   E L
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195

Query: 168 RIVPEIILHSQTMGIRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLI 227
            ++  ++ +    G + ++ T+  ++  LCK      A+++F  M       +    S++
Sbjct: 196 VLIDRMVEY----GFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIV 255

Query: 228 LASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKAD 287
           + SLC  K+ S D  LS   EM  KG    VV YS++I      G   D   +L +M   
Sbjct: 256 IDSLC--KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 315

Query: 288 GFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAG 347
              PD+V ++ +++  + +G    A EL++E++  G+ PD  TYN  I G CK+      
Sbjct: 316 NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEA 375

Query: 348 IQMISHMEELGCKPNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMING 407
            QM   M   GC+P+++TY+IL+ S CK   +++  +L  ++  KGL  N  T+  ++ G
Sbjct: 376 NQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLG 435

Query: 408 LFQNGDVIEACVLLEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPG 467
             Q+G +  A  L +EM+    PP + T+G +L  LC    + KALE+   M +     G
Sbjct: 436 FCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLG 495

Query: 468 PKAWEILL 473
              + I++
Sbjct: 496 IGIYNIII 497


HSP 2 Score: 137.1 bits (344), Expect = 5.2e-31
Identity = 91/376 (24.20%), Postives = 173/376 (46.01%), Query Frame = 1

Query: 79  YYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAISLFRRI 138
           Y  V+ +L +   F     + + ++ ++  +     +  LI       +  D   + R +
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEME-MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 307

Query: 139 PMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRILIAALCKINK 198
                +P  ++ ++L+ +  + G+ L    E+     T GI  +  T+  LI   CK N 
Sbjct: 308 IGRNIIPDVVTFSALIDVFVKEGKLLE-AKELYNEMITRGIAPDTITYNSLIDGFCKENC 367

Query: 199 VGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDY 258
           +  A ++F+ M+++G   +    S+++ S C+ K    D  +    E+  KG  P  + Y
Sbjct: 368 LHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV--DDGMRLFREISSKGLIPNTITY 427

Query: 259 SNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLL 318
           + ++  F   G  + A  L  +M + G  P +V Y ++L+G+  +G+   A E+F+++  
Sbjct: 428 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 487

Query: 319 FGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGELNE 378
             +   I  YN+ IHG+C     +    +   + + G KP+V+TYN+++  LCK G L+E
Sbjct: 488 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 547

Query: 379 ARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEILS 438
           A  L  KM+  G   +  T+ I+I        +I +  L+EEM    F    ST   ++ 
Sbjct: 548 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 607

Query: 439 WLCKRDMVGKALELLT 455
            L  R +    L++L+
Sbjct: 608 MLSDRRLDKSFLDMLS 619


HSP 3 Score: 136.7 bits (343), Expect = 6.7e-31
Identity = 94/349 (26.93%), Postives = 166/349 (47.56%), Query Frame = 1

Query: 127 RIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTF 186
           ++ DAI LF  +   R +P+ +  N L   + R  +   +V       +  GI  +  T 
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQ-YDLVLGFCKGMELNGIEHDMYTM 109

Query: 187 RILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVL-SFLEE 246
            I+I   C+  K+  A  +       GY  +    S ++   C +   S  V L   + E
Sbjct: 110 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 169

Query: 247 MRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGD 306
           M+Q+   P +V  S +I     +G  S+ALVL+++M   GF+PD V Y  VLN +   G+
Sbjct: 170 MKQR---PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGN 229

Query: 307 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNI 366
             +A +LF ++    +   +  Y++ I  LCK G+ +  + + + ME  G K +V+TY+ 
Sbjct: 230 SALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 289

Query: 367 LLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSR 426
           L+  LC  G+ ++  K+  +M  + +  ++ TF  +I+   + G ++EA  L  EM+   
Sbjct: 290 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 349

Query: 427 FPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLS 475
             P   T+  ++   CK + + +A ++  LMV K   P    + IL+ S
Sbjct: 350 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394


HSP 4 Score: 136.0 bits (341), Expect = 1.2e-30
Identity = 102/402 (25.37%), Postives = 176/402 (43.78%), Query Frame = 1

Query: 74  PTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAIS 133
           PTP  +  +   +ART Q+  +      ++ +   E   Y    +I  Y R  ++  A S
Sbjct: 68  PTPIDFNRLCSAVARTKQYDLVLGFCKGME-LNGIEHDMYTMTIMINCYCRKKKLLFAFS 127

Query: 134 LFRRIPMFRCVPSTLSLNSLLFLLCRNG---EGLRIVPEIILHSQTMGIRLEDSTFRILI 193
           +  R       P T++ ++L+   C  G   E + +V  ++   Q    R +  T   LI
Sbjct: 128 VLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ----RPDLVTVSTLI 187

Query: 194 AALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKG 253
             LC   +V  A+ + + M+  G+  +      +L  LC  K  +  + L    +M ++ 
Sbjct: 188 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLC--KSGNSALALDLFRKMEERN 247

Query: 254 FCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMAD 313
               VV YS VI      G   DAL L N+M+  G K D+V Y+ ++ G+  DG +    
Sbjct: 248 IKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 307

Query: 314 ELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESL 373
           ++  E++   ++PD+ T++  I    K+G      ++ + M   G  P+ ITYN L++  
Sbjct: 308 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 367

Query: 374 CKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQI 433
           CK   L+EA ++   M  KG   ++ T+ I+IN   +   V +   L  E+      P  
Sbjct: 368 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNT 427

Query: 434 STFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILL 473
            T+  ++   C+   +  A EL   MV +   P    + ILL
Sbjct: 428 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462

BLAST of Cla018033 vs. Swiss-Prot
Match: PPR91_ARATH (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 2.3e-39
Identity = 98/346 (28.32%), Postives = 174/346 (50.29%), Query Frame = 1

Query: 127 RIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTF 186
           ++ DA++LF  +   R  PS +  + LL  + +  +   +V  +    Q +GI     T+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNK-FDVVISLGEQMQNLGIPHNHYTY 120

Query: 187 RILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEM 246
            ILI   C+ +++  A+ +   M+  GY  N    S +L   C  K  S  V L  +++M
Sbjct: 121 SILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL--VDQM 180

Query: 247 RQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDY 306
              G+ P  V ++ +I        +S+A+ L+++M A G +PD+V Y +V+NG+   GD 
Sbjct: 181 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 240

Query: 307 KMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNIL 366
            +A  L +++    L P +  YN  I GLCK  + +  + +   ME  G +PNV+TY+ L
Sbjct: 241 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 300

Query: 367 LESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRF 426
           +  LC  G  ++A +L S M  + +  ++ TF  +I+   + G ++EA  L +EM+    
Sbjct: 301 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 360

Query: 427 PPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILL 473
            P I T+  +++  C  D + +A ++   MV K+ FP    +  L+
Sbjct: 361 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403


HSP 2 Score: 164.1 bits (414), Expect = 3.9e-39
Identity = 109/397 (27.46%), Postives = 187/397 (47.10%), Query Frame = 1

Query: 79  YYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAISLFRRI 138
           Y  ++    R SQ      VL ++ ++  +E        L+  Y    RI +A++L  ++
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLG-YEPNIVTLSSLLNGYCHSKRISEAVALVDQM 178

Query: 139 PMFRCVPSTLSLNSL---LFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRILIAALCK 198
            +    P+T++ N+L   LFL  +  E + ++  ++      G + +  T+ +++  LCK
Sbjct: 179 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMV----AKGCQPDLVTYGVVVNGLCK 238

Query: 199 INKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCPVV 258
                 A  + N M          I + I+  LC+ K    D  L+  +EM  KG  P V
Sbjct: 239 RGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM--DDALNLFKEMETKGIRPNV 298

Query: 259 VDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDE 318
           V YS++I      G  SDA  LL+ M      PD+  ++ +++  + +G    A++L+DE
Sbjct: 299 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 358

Query: 319 LLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGE 378
           ++   + P I TY+  I+G C     +   QM   M    C P+V+TYN L++  CK   
Sbjct: 359 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 418

Query: 379 LNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGE 438
           + E  ++  +M  +GL  N  T+ I+I GLFQ GD   A  + +EM+    PP I T+  
Sbjct: 419 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 478

Query: 439 ILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILL 473
           +L  LCK   + KA+ +   + R    P    + I++
Sbjct: 479 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508


HSP 3 Score: 134.8 bits (338), Expect = 2.6e-30
Identity = 91/349 (26.07%), Postives = 166/349 (47.56%), Query Frame = 1

Query: 126 DRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDST 185
           ++  +A++L  R+    C P  ++   ++  LC+ G+    +   +L+    G +LE   
Sbjct: 200 NKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD--TDLAFNLLNKMEQG-KLEPGV 259

Query: 186 --FRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFL 245
             +  +I  LCK   +  A+ +F  M T+G   N    S +++ LC     S    L  L
Sbjct: 260 LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL--L 319

Query: 246 EEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIAD 305
            +M ++   P V  +S +I  FV  G   +A  L ++M      P IV Y+ ++NG    
Sbjct: 320 SDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMH 379

Query: 306 GDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITY 365
                A ++F+ ++     PD+ TYN  I G CK    E G+++   M + G   N +TY
Sbjct: 380 DRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 439

Query: 366 NILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLG 425
           NIL++ L + G+ + A+++  +M   G+  N+ T+  +++GL +NG + +A V+ E +  
Sbjct: 440 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 499

Query: 426 SRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILL 473
           S+  P I T+  ++  +CK   V    +L   +  K   P   A+  ++
Sbjct: 500 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 543


HSP 4 Score: 133.3 bits (334), Expect = 7.5e-30
Identity = 93/363 (25.62%), Postives = 167/363 (46.01%), Query Frame = 1

Query: 62  ALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKV 121
           ALI    A  C P    Y  V+  L +         +L+++++ +  E    ++  +I  
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK-LEPGVLIYNTIIDG 266

Query: 122 YGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNG---EGLRIVPEIILHSQTMG 181
             +   + DA++LF+ +      P+ ++ +SL+  LC  G   +  R++ ++I       
Sbjct: 267 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK---- 326

Query: 182 IRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDV 241
           I  +  TF  LI A  K  K+  A ++++ M+      +    S ++   C       D 
Sbjct: 327 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL--DE 386

Query: 242 VLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLN 301
                E M  K   P VV Y+ +IK F       + + +  +M   G   + V Y +++ 
Sbjct: 387 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 446

Query: 302 GVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKP 361
           G+   GD  MA E+F E++  G+ P+I TYN  + GLCK G  E  + +  +++    +P
Sbjct: 447 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 506

Query: 362 NVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLL 421
            + TYNI++E +CK G++ +   L   + LKG+  ++  +  MI+G  + G   EA  L 
Sbjct: 507 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 562


HSP 5 Score: 119.4 bits (298), Expect = 1.1e-25
Identity = 85/355 (23.94%), Postives = 155/355 (43.66%), Query Frame = 1

Query: 91  QFHHIAPVLDRLQRVET--FETPEYVFVDLIKVYGRIDRIQDAISLFRRIPMFRCVPSTL 150
           ++ H+   L+  + +ET         +  LI       R  DA  L   +   +  P   
Sbjct: 268 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 327

Query: 151 SLNSLLFLLCRNG---EGLRIVPEIILHSQTMGIRLEDSTFRILIAALCKINKVGHAMEI 210
           + ++L+    + G   E  ++  E++  S    I     T+  LI   C  +++  A ++
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI----VTYSSLINGFCMHDRLDEAKQM 387

Query: 211 FNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDYSNVIKFF 270
           F +M+++    +    + ++   C+ K       +    EM Q+G     V Y+ +I+  
Sbjct: 388 FEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG--MEVFREMSQRGLVGNTVTYNILIQGL 447

Query: 271 VTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDI 330
              G    A  +  +M +DG  P+I+ Y  +L+G+  +G  + A  +F+ L    + P I
Sbjct: 448 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 507

Query: 331 YTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGELNEARKLRSK 390
           YTYN+ I G+CK G  E G  +  ++   G KP+V+ YN ++   C+ G   EA  L  +
Sbjct: 508 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 567

Query: 391 MQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEILSWL 441
           M+  G   N   +  +I    ++GD   +  L++EM    F    ST G + + L
Sbjct: 568 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616


HSP 6 Score: 108.6 bits (270), Expect = 2.0e-22
Identity = 89/404 (22.03%), Postives = 180/404 (44.55%), Query Frame = 1

Query: 74  PTPNAYYF--VLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDA 133
           P P+   F  +L  +A+ ++F  +  + +++Q +       Y +  LI  + R  ++  A
Sbjct: 77  PFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHN-HYTYSILINCFCRRSQLPLA 136

Query: 134 ISLFRRIPMFRCVPSTLSLNSLLFLLC---RNGEGLRIVPEIILHSQTMGIRLEDSTFRI 193
           +++  ++      P+ ++L+SLL   C   R  E + +V ++ +     G +    TF  
Sbjct: 137 LAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV----TGYQPNTVTFNT 196

Query: 194 LIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQ 253
           LI  L   NK   AM + + M+ +G   +     +++  LC++ +T  D+  + L +M Q
Sbjct: 197 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT--DLAFNLLNKMEQ 256

Query: 254 KGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKM 313
               P V+ Y+ +I          DAL L  +M+  G +P++V Y+ +++ +   G +  
Sbjct: 257 GKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSD 316

Query: 314 ADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLE 373
           A  L  +++   + PD++T++  I    K+G      ++   M +    P+++TY+ L+ 
Sbjct: 317 ASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 376

Query: 374 SLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPP 433
             C    L+EA+++   M  K    ++ T+  +I G  +   V E   +  EM       
Sbjct: 377 GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 436

Query: 434 QISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILL 473
              T+  ++  L +      A E+   MV     P    +  LL
Sbjct: 437 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

BLAST of Cla018033 vs. Swiss-Prot
Match: PPR90_ARATH (Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.9e-39
Identity = 104/381 (27.30%), Postives = 184/381 (48.29%), Query Frame = 1

Query: 79  YYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDAISLFRRI 138
           Y  ++    R SQ      +L ++ ++  +E        L+  Y    RI DA++L  ++
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLG-YEPSIVTLSSLLNGYCHGKRISDAVALVDQM 182

Query: 139 PMFRCVPSTLSLNSL---LFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRILIAALCK 198
                 P T++  +L   LFL  +  E + +V  ++      G +    T+ +++  LCK
Sbjct: 183 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----GCQPNLVTYGVVVNGLCK 242

Query: 199 INKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCPVV 258
                 A+ + N M       +  I + I+ SLC+ +    D  L+  +EM  KG  P V
Sbjct: 243 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV--DDALNLFKEMETKGIRPNV 302

Query: 259 VDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDE 318
           V YS++I    + G  SDA  LL+ M      P++V +  +++  + +G +  A++L+D+
Sbjct: 303 VTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDD 362

Query: 319 LLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGE 378
           ++   + PDI+TYN  ++G C     +   QM   M    C P+V+TYN L++  CK+  
Sbjct: 363 MIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKR 422

Query: 379 LNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGE 438
           + +  +L  +M  +GL  +  T+  +I GLF +GD   A  + ++M+    PP I T+  
Sbjct: 423 VEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSI 482

Query: 439 ILSWLCKRDMVGKALELLTLM 457
           +L  LC    + KALE+   M
Sbjct: 483 LLDGLCNNGKLEKALEVFDYM 496


HSP 2 Score: 129.0 bits (323), Expect = 1.4e-28
Identity = 91/369 (24.66%), Postives = 166/369 (44.99%), Query Frame = 1

Query: 72  CHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDA 131
           C P    Y  V+  L +         +L++++  +  E    +F  +I    +   + DA
Sbjct: 221 CQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK-IEADVVIFNTIIDSLCKYRHVDDA 280

Query: 132 ISLFRRIPMFRCVPSTLSLNSLLFLLCRNG---EGLRIVPEIILHSQTMGIRLEDSTFRI 191
           ++LF+ +      P+ ++ +SL+  LC  G   +  +++ ++I       +     TF  
Sbjct: 281 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNL----VTFNA 340

Query: 192 LIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQ 251
           LI A  K  K   A ++++ MI      +    + ++   C       D      E M  
Sbjct: 341 LIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL--DKAKQMFEFMVS 400

Query: 252 KGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKM 311
           K   P VV Y+ +IK F       D   L  +M   G   D V YT ++ G+  DGD   
Sbjct: 401 KDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDN 460

Query: 312 ADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLE 371
           A ++F +++  G+ PDI TY++ + GLC  G  E  +++  +M++   K ++  Y  ++E
Sbjct: 461 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 520

Query: 372 SLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPP 431
            +CK G++++   L   + LKG+  N+ T+  MI+GL     + EA  LL++M      P
Sbjct: 521 GMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLP 580

Query: 432 QISTFGEIL 438
              T+  ++
Sbjct: 581 NSGTYNTLI 582


HSP 3 Score: 128.6 bits (322), Expect = 1.8e-28
Identity = 90/355 (25.35%), Postives = 159/355 (44.79%), Query Frame = 1

Query: 91  QFHHIAPVLDRLQRVET--FETPEYVFVDLIKVYGRIDRIQDAISLFRRIPMFRCVPSTL 150
           ++ H+   L+  + +ET         +  LI       R  DA  L   +   +  P+ +
Sbjct: 272 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 331

Query: 151 SLNSLLFLLCRNG---EGLRIVPEIILHSQTMGIRLEDSTFRILIAALCKINKVGHAMEI 210
           + N+L+    + G   E  ++  ++I  S    I  +  T+  L+   C  +++  A ++
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMIKRS----IDPDIFTYNSLVNGFCMHDRLDKAKQM 391

Query: 211 FNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDYSNVIKFF 270
           F +M+++    +    + ++   C+ K       L    EM  +G     V Y+ +I+  
Sbjct: 392 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTEL--FREMSHRGLVGDTVTYTTLIQGL 451

Query: 271 VTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDI 330
              G   +A  +  +M +DG  PDI+ Y+++L+G+  +G  + A E+FD +    +  DI
Sbjct: 452 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 511

Query: 331 YTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGELNEARKLRSK 390
           Y Y   I G+CK G  + G  +   +   G KPNV+TYN ++  LC    L EA  L  K
Sbjct: 512 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 571

Query: 391 MQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEILSWL 441
           M+  G   N  T+  +I    ++GD   +  L+ EM   RF    ST G + + L
Sbjct: 572 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620


HSP 4 Score: 126.7 bits (317), Expect = 7.0e-28
Identity = 91/371 (24.53%), Postives = 164/371 (44.20%), Query Frame = 1

Query: 103 QRVETFETPEYV-FVDLIKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNG 162
           Q VE    P+ + F  LI      ++  +A++L  R+    C P+ ++   ++  LC+ G
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239

Query: 163 EGLRIVPEIILHSQTMGIRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRIC 222
           +   +   ++   +   I  +   F  +I +LCK   V  A+ +F  M T+G   N    
Sbjct: 240 D-TDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 299

Query: 223 SLILASLCEQKETSGDVVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKM 282
           S +++ LC     S    L  L +M +K   P +V ++ +I  FV  G   +A  L + M
Sbjct: 300 SSLISCLCSYGRWSDASQL--LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 359

Query: 283 KADGFKPDIVCYTMVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNS 342
                 PDI  Y  ++NG         A ++F+ ++     PD+ TYN  I G CK    
Sbjct: 360 IKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRV 419

Query: 343 EAGIQMISHMEELGCKPNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIM 402
           E G ++   M   G   + +TY  L++ L   G+ + A+K+  +M   G+  ++ T+ I+
Sbjct: 420 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 479

Query: 403 INGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNF 462
           ++GL  NG + +A  + + M  S     I  +  ++  +CK   V    +L   +  K  
Sbjct: 480 LDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGV 539

Query: 463 FPGPKAWEILL 473
            P    +  ++
Sbjct: 540 KPNVVTYNTMI 547


HSP 5 Score: 120.2 bits (300), Expect = 6.5e-26
Identity = 68/278 (24.46%), Postives = 144/278 (51.80%), Query Frame = 1

Query: 186 FRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEE 245
           F  L++A+ K+ K    + +   M            ++++   C + + S  + L+ L +
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQIS--LALALLGK 147

Query: 246 MRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGD 305
           M + G+ P +V  S+++  +      SDA+ L+++M   G++PD + +T +++G+     
Sbjct: 148 MMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 207

Query: 306 YKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNI 365
              A  L D ++  G  P++ TY V ++GLCK+G+++  + +++ ME    + +V+ +N 
Sbjct: 208 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNT 267

Query: 366 LLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSR 425
           +++SLCK   +++A  L  +M+ KG+  N+ T+  +I+ L   G   +A  LL +M+  +
Sbjct: 268 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 327

Query: 426 FPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFP 464
             P + TF  ++    K     +A +L   M++++  P
Sbjct: 328 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363


HSP 6 Score: 117.1 bits (292), Expect = 5.5e-25
Identity = 83/342 (24.27%), Postives = 151/342 (44.15%), Query Frame = 1

Query: 115 FVDLIKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHS 174
           F  L+    ++ +    ISL  ++     V    + N L+   CR  + + +   ++   
Sbjct: 88  FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQ-ISLALALLGKM 147

Query: 175 QTMGIRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKET 234
             +G      T   L+   C   ++  A+ + + M+  GY  +    + ++  L    + 
Sbjct: 148 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 207

Query: 235 SGDVVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYT 294
           S  V L  ++ M Q+G  P +V Y  V+     RG +  AL LLNKM+A   + D+V + 
Sbjct: 208 SEAVAL--VDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 267

Query: 295 MVLNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEEL 354
            +++ +        A  LF E+   G+ P++ TY+  I  LC  G      Q++S M E 
Sbjct: 268 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 327

Query: 355 GCKPNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEA 414
              PN++T+N L+++  K G+  EA KL   M  + +  ++ T+  ++NG   +  + +A
Sbjct: 328 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKA 387

Query: 415 CVLLEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLM 457
             + E M+     P + T+  ++   CK   V    EL   M
Sbjct: 388 KQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426


HSP 7 Score: 115.2 bits (287), Expect = 2.1e-24
Identity = 97/403 (24.07%), Postives = 179/403 (44.42%), Query Frame = 1

Query: 74  PTPNAYYF--VLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQDA 133
           P P+   F  +L  +A+  +F  +  + +++QR+E      Y +  LI  + R  +I  A
Sbjct: 81  PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGL-YTYNILINCFCRRSQISLA 140

Query: 134 ISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQT--MGIRLEDSTFRIL 193
           ++L  ++      PS ++L+SLL   C    G RI   + L  Q   MG R +  TF  L
Sbjct: 141 LALLGKMMKLGYEPSIVTLSSLLNGYCH---GKRISDAVALVDQMVEMGYRPDTITFTTL 200

Query: 194 IAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQK 253
           I  L   NK   A+ + + M+  G   N     +++  LC++ +T  D+ L+ L +M   
Sbjct: 201 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT--DLALNLLNKMEAA 260

Query: 254 GFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMA 313
                VV ++ +I          DAL L  +M+  G +P++V Y+ +++ + + G +  A
Sbjct: 261 KIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDA 320

Query: 314 DELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLES 373
            +L  +++   + P++ T+N  I    K+G      ++   M +    P++ TYN L+  
Sbjct: 321 SQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNG 380

Query: 374 LCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQ 433
            C    L++A+++   M  K    ++ T+  +I G  ++  V +   L  EM        
Sbjct: 381 FCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 440

Query: 434 ISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILL 473
             T+  ++  L        A ++   MV     P    + ILL
Sbjct: 441 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477


HSP 8 Score: 87.4 bits (215), Expect = 4.7e-16
Identity = 52/200 (26.00%), Postives = 96/200 (48.00%), Query Frame = 1

Query: 257 DYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMADELFDEL 316
           DY  +++  +      DA+ L   M      P IV +  +L+ +     + +   L +++
Sbjct: 52  DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKM 111

Query: 317 LLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLESLCKTGEL 376
               +V  +YTYN+ I+  C++      + ++  M +LG +P+++T + LL   C    +
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 377 NEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQISTFGEI 436
           ++A  L  +M   G   +  TF  +I+GLF +    EA  L++ M+     P + T+G +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 437 LSWLCKRDMVGKALELLTLM 457
           ++ LCKR     AL LL  M
Sbjct: 232 VNGLCKRGDTDLALNLLNKM 251

BLAST of Cla018033 vs. TrEMBL
Match: A0A0A0LA35_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730720 PE=4 SV=1)

HSP 1 Score: 828.6 bits (2139), Expect = 4.1e-237
Identity = 411/495 (83.03%), Postives = 451/495 (91.11%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYLL 60
           + SFSVVK+SNNFLRKHR  P S +KTKWHQTF QDEALR LKQAAN  +P       LL
Sbjct: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPH-----LLL 61

Query: 61  SALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIK 120
           SAL+TSF AY CHPTPNAYYFVLKTLARTSQFHHI PVL RLQ +E F+TPEY+FVDLIK
Sbjct: 62  SALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIK 121

Query: 121 VYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIR 180
           +YGR++RIQDA++LFRRIPMFRCVPSTLSLNSLL  L RN +GL I+P+IIL+S +MGIR
Sbjct: 122 LYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIR 181

Query: 181 LEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVL 240
           LE STF+ILI ALCK+NKVGHAME+FNYMITEGYGLNP+ICSLILASLC+QK++SGDVVL
Sbjct: 182 LEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVL 241

Query: 241 SFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGV 300
            FLEEMRQKGFCP VVDYSNVIKFFVTRGM SDA+ LLNKMKADGFKPDIVCYTMVLNGV
Sbjct: 242 GFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGV 301

Query: 301 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNV 360
           IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AG+QMI HME LGC+PNV
Sbjct: 302 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNV 361

Query: 361 ITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEE 420
           ITYN++L+SLCKTGEL+EARKLRSKMQLKGLAENLRTFRIMI+GLF NG+VIEACVLLEE
Sbjct: 362 ITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEE 421

Query: 421 MLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIELT 480
           MLGSRFPPQISTF EILSWLCKR MVGKA+ELL LMV KNF PGPKAWEILLLSSE ELT
Sbjct: 422 MLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELT 481

Query: 481 SLKSLETTLEDILGI 496
           S+KSLETTL+D++GI
Sbjct: 482 SVKSLETTLKDLVGI 491

BLAST of Cla018033 vs. TrEMBL
Match: A0A067JJ28_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00390 PE=4 SV=1)

HSP 1 Score: 531.6 bits (1368), Expect = 1.0e-147
Identity = 263/476 (55.25%), Postives = 344/476 (72.27%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPK--PPNSDEPY 60
           M   S  K    FLRKHR  P SPYK KWH  F+Q +A++ LKQ A S +    NS    
Sbjct: 1   MVRSSSFKAGRLFLRKHRRWPHSPYKAKWHHIFNQQQAMQNLKQEATSLQNLQQNSKSSN 60

Query: 61  LLSALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDL 120
           LLS+LI SF  Y   PTP A++F++KTL  T+Q H+I  VLD L+++E FETPE++   L
Sbjct: 61  LLSSLIHSFSVYNSEPTPQAFHFLIKTLTETTQLHYIPLVLDHLEKIENFETPEFILAHL 120

Query: 121 IKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMG 180
           IK YG  + IQ AI LF RIP FRC+PS  SLN+LL +LCR+ +GL  VPEI+L S+ MG
Sbjct: 121 IKFYGNANEIQKAIELFYRIPKFRCLPSVYSLNTLLSVLCRSSQGLERVPEILLRSRVMG 180

Query: 181 IRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDV 240
           IRLEDS+FR+L AA+CKI KVG+A+EIFN MI +G+ ++ +ICSL+L+S+CEQ + S   
Sbjct: 181 IRLEDSSFRLLTAAICKIKKVGYAVEIFNCMINDGFDVDTKICSLLLSSVCEQADVSRVD 240

Query: 241 VLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLN 300
           V+ FL ++R+ GFCP +VDYSNVI+F V  GM  DAL +LN+MK DG KPD+VCYTMVL 
Sbjct: 241 VMGFLGQLRKLGFCPGMVDYSNVIRFLVRGGMGMDALDVLNQMKIDGIKPDVVCYTMVLK 300

Query: 301 GVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKP 360
           GVIA+G Y  AD+LFDELL+FGLVPD+YTYN Y+ GLCKQ N  AGI+MI+ MEELGCKP
Sbjct: 301 GVIANGFYSKADDLFDELLVFGLVPDVYTYNAYVDGLCKQENLHAGIKMIASMEELGCKP 360

Query: 361 NVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLL 420
           N+ITYN+LLE+LCK+GE++ AR L  +M  KG+  +++T+++MI+G   +G +IEAC LL
Sbjct: 361 NLITYNLLLEALCKSGEISRARDLMKEMGKKGIGPSMQTYKVMIDGSTCSGKIIEACALL 420

Query: 421 EEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLS 475
           +E+L      +   F EI+  LC+   + KALELL  M  KN  PG + W++LL S
Sbjct: 421 DEVLDKGLCAESLIFDEIICGLCQIGSISKALELLEKMALKNVAPGVRVWKVLLSS 476

BLAST of Cla018033 vs. TrEMBL
Match: V7B2Q8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G089500g PE=4 SV=1)

HSP 1 Score: 530.4 bits (1365), Expect = 2.3e-147
Identity = 258/497 (51.91%), Postives = 353/497 (71.03%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAA---NSPKPPNSDEP 60
           M    + KR+N +LRK R  P SPYKT WH  F + +A+  LKQA      P+ PN   P
Sbjct: 1   MVRHPLSKRANKYLRKFRKWPHSPYKTSWHHNFGEQQAMHKLKQATLEMGCPQTPNLPHP 60

Query: 61  YLLSALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVD 120
           +LLS L+ +F+AY C PTP AYYFV+KTL  TS    I PVLD L+++ETFETPE++ V 
Sbjct: 61  FLLSTLLDAFKAYSCDPTPKAYYFVIKTLTSTSHLQDIPPVLDHLEQLETFETPEFILVY 120

Query: 121 LIKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTM 180
           LI+ YG  DR+QDA+ LF RIP FRC P+  SLN +L LLCR  E L++VPEI+L SQ M
Sbjct: 121 LIRFYGLSDRVQDAVDLFLRIPRFRCTPTVWSLNLVLSLLCRKRECLKMVPEILLKSQHM 180

Query: 181 GIRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGD 240
            IR+E+STF++LI ALC+I +VG+A+++ NYMI  GYGL+  ICSLI++SLCEQ++ +  
Sbjct: 181 NIRVEESTFQVLIEALCRIKRVGYAIKMLNYMIEGGYGLDETICSLIISSLCEQEDMTSV 240

Query: 241 VVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVL 300
             L    +MR+ GFCP V+DY+N+I+F V  G  +DAL +LN+ K DG KPD+VCYTMVL
Sbjct: 241 EALVIWRDMRKLGFCPGVMDYTNMIRFLVKEGKGTDALDILNQQKKDGIKPDVVCYTMVL 300

Query: 301 NGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCK 360
           +G++A+G+Y   +ELFDE+L+FGLVPD+YTYNVYI+GLCKQ N +  +++++ MEEL C+
Sbjct: 301 SGIVAEGEYVKLEELFDEILVFGLVPDVYTYNVYINGLCKQNNVDEALKIVASMEELECR 360

Query: 361 PNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVL 420
           PNV+T N LL +LC  G+L +AR +  +M  KG+  NL ++RIM++GL   G++ EAC L
Sbjct: 361 PNVVTCNTLLGALCVAGDLRKARGVMKEMGWKGVGLNLHSYRIMLDGLVGKGEIGEACFL 420

Query: 421 LEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEI 480
           LEEML   F P+ STF  I+  +C++ ++ +A+EL   +V K+F PG +AWE LLL S  
Sbjct: 421 LEEMLEKCFFPRSSTFDHIIFQMCQKGLIAEAIELTKKIVAKSFVPGARAWEALLLKSG- 480

Query: 481 ELTSLKSLETTLEDILG 495
             + L   ETT   +LG
Sbjct: 481 --SKLGFSETTFSGLLG 494

BLAST of Cla018033 vs. TrEMBL
Match: F6GXZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00830 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 3.0e-147
Identity = 263/484 (54.34%), Postives = 345/484 (71.28%), Query Frame = 1

Query: 12  NFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQ--AANSPKPPNSDEPYLLSALITSFRA 71
           NFLRK R  P SPYK  WH+TFH  +A++TLK   A  SP P +      LS LI SFR 
Sbjct: 13  NFLRKRRKWPLSPYKATWHETFHHRQAMQTLKNTIANQSPSPQSPSNSQFLSILIDSFRI 72

Query: 72  YCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQ 131
           Y   PTPNAY FV+ TL R  QFHH+ P+L RL++VE FETPE++F +LIKVYG  +  +
Sbjct: 73  YNSDPTPNAYRFVISTLTRCRQFHHLPPLLHRLEKVEKFETPEFIFTNLIKVYGNANMFE 132

Query: 132 DAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRIL 191
           DA+ LF RIP FRCVPS  SLN+LL++LC+  EGL +VP+I+L SQ M IRLE+S+FRIL
Sbjct: 133 DAVDLFFRIPNFRCVPSVYSLNALLYVLCKRREGLVMVPQILLKSQAMNIRLEESSFRIL 192

Query: 192 IAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQK 251
           +AALC+I K  +A+ I NYM+ +GY ++ ++CS+IL+SLCEQK  SGD VL F+EEMR+ 
Sbjct: 193 VAALCRIKKHNYAIRILNYMLNDGYAVDAKMCSIILSSLCEQKGLSGDEVLRFMEEMRKL 252

Query: 252 GFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMA 311
           GF P  VD +NVI+F V  GM  DAL + ++MK DG KPD V YTM+LNGV ADGDY+ A
Sbjct: 253 GFYPGRVDCNNVIRFLVKEGMVMDALGVFDQMKTDGIKPDTVSYTMILNGVTADGDYEKA 312

Query: 312 DELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLES 371
           D+LFDE+L+ G+VPDI+ YNVYI+ LCKQ N E G++M++ M ELGCKP+ +TYN+LLE 
Sbjct: 313 DDLFDEMLVLGVVPDIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVTYNMLLEG 372

Query: 372 LCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQ 431
           + K  +L   R+L  +M+L+G+  N  T+RIM++GL   G++ E+C LLEEML   F   
Sbjct: 373 MSKVRDLGGMRELAREMELEGVQWNWETYRIMLDGLVGKGEIDESCSLLEEMLDKYFSCW 432

Query: 432 ISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIELTSLKSLETTL 491
            STF EI+  LC+R +V KAL+L+  MVRK   PG +AWE LLL S          ET+L
Sbjct: 433 CSTFDEIICELCQRGLVCKALQLVNKMVRKTIAPGARAWEALLLGS----VEFSFAETSL 492

Query: 492 EDIL 494
            +++
Sbjct: 493 TELV 492

BLAST of Cla018033 vs. TrEMBL
Match: V4UT39_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013613mg PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 3.0e-147
Identity = 266/483 (55.07%), Postives = 349/483 (72.26%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDE---- 60
           M   S +KR+N  LRKHR  P SPYK KWHQT  Q +A + +KQ+  +P      +    
Sbjct: 1   MVRSSALKRANLHLRKHRKWPLSPYKAKWHQTLDQQQAKQNVKQSLTTPPTKQQQQIPKQ 60

Query: 61  PYLLSALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFV 120
           P++LS+L+ SF  Y C P P AY+FV+KTLA  SQF  I+ VLD +++ E FETPE++F+
Sbjct: 61  PHILSSLLHSFSIYNCEPPPEAYHFVIKTLAENSQFCDISSVLDHIEKRENFETPEFIFI 120

Query: 121 DLIKVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQT 180
           DLIK Y    R QD+++LF +IP FRCVPS  SLN+LL +LCRN E +++VP+I+L SQ 
Sbjct: 121 DLIKTYADAHRFQDSVNLFYKIPKFRCVPSVYSLNALLSVLCRNKEWVKMVPQILLKSQL 180

Query: 181 MGIRLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSG 240
           M IR+E+S+FRILI+ LC+IN+VG A+EI N MI +G+ ++ + CS IL+S+CEQ++ S 
Sbjct: 181 MNIRIEESSFRILISTLCRINRVGFAIEILNCMINDGFCVDGKTCSWILSSVCEQRDLSS 240

Query: 241 DVVLSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMV 300
           D +L F++EM++ GFC  +VDY+NVI+  V +    DAL +LN+MK+DG KPDIVCYTMV
Sbjct: 241 DELLGFVQEMKKLGFCFGMVDYTNVIRSLVKKEKVFDALGILNQMKSDGIKPDIVCYTMV 300

Query: 301 LNGVIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGC 360
           LNGVI   DY  A+ELFDELL+ GLVPD+YTYNVYI+GLCKQ N EAGI+MI+ MEELG 
Sbjct: 301 LNGVIVQEDYVKAEELFDELLVLGLVPDVYTYNVYINGLCKQNNVEAGIKMIACMEELGS 360

Query: 361 KPNVITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACV 420
           KP+VITYN LL++LCK  ELN  R+L  +M+ KG+  NL+T+ IMI+GL   GD+IEAC 
Sbjct: 361 KPDVITYNTLLQALCKVRELNRLRELVKEMKWKGIVLNLQTYSIMIDGLASKGDIIEACG 420

Query: 421 LLEEMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSE 480
           LLEE L      Q S F E +  LC+R +V KALELL  M  K+  PG + WE LLLSS 
Sbjct: 421 LLEEALNKGLCTQSSMFDETICGLCQRGLVRKALELLKQMADKDVSPGARVWEALLLSSV 480

BLAST of Cla018033 vs. NCBI nr
Match: gi|449440241|ref|XP_004137893.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis sativus])

HSP 1 Score: 828.6 bits (2139), Expect = 5.9e-237
Identity = 411/495 (83.03%), Postives = 451/495 (91.11%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYLL 60
           + SFSVVK+SNNFLRKHR  P S +KTKWHQTF QDEALR LKQAAN  +P       LL
Sbjct: 2   VGSFSVVKKSNNFLRKHRKWPLSSHKTKWHQTFDQDEALRILKQAANPDQPH-----LLL 61

Query: 61  SALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIK 120
           SAL+TSF AY CHPTPNAYYFVLKTLARTSQFHHI PVL RLQ +E F+TPEY+FVDLIK
Sbjct: 62  SALVTSFTAYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFLENFQTPEYIFVDLIK 121

Query: 121 VYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIR 180
           +YGR++RIQDA++LFRRIPMFRCVPSTLSLNSLL  L RN +GL I+P+IIL+S +MGIR
Sbjct: 122 LYGRMNRIQDAVTLFRRIPMFRCVPSTLSLNSLLSQLSRNAQGLPIIPDIILNSHSMGIR 181

Query: 181 LEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVL 240
           LE STF+ILI ALCK+NKVGHAME+FNYMITEGYGLNP+ICSLILASLC+QK++SGDVVL
Sbjct: 182 LEHSTFQILITALCKVNKVGHAMELFNYMITEGYGLNPQICSLILASLCQQKKSSGDVVL 241

Query: 241 SFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGV 300
            FLEEMRQKGFCP VVDYSNVIKFFVTRGM SDA+ LLNKMKADGFKPDIVCYTMVLNGV
Sbjct: 242 GFLEEMRQKGFCPAVVDYSNVIKFFVTRGMGSDAVDLLNKMKADGFKPDIVCYTMVLNGV 301

Query: 301 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNV 360
           IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQG+S AG+QMI HME LGC+PNV
Sbjct: 302 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGDSVAGLQMIPHMEALGCQPNV 361

Query: 361 ITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEE 420
           ITYN++L+SLCKTGEL+EARKLRSKMQLKGLAENLRTFRIMI+GLF NG+VIEACVLLEE
Sbjct: 362 ITYNVILKSLCKTGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACVLLEE 421

Query: 421 MLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIELT 480
           MLGSRFPPQISTF EILSWLCKR MVGKA+ELL LMV KNF PGPKAWEILLLSSE ELT
Sbjct: 422 MLGSRFPPQISTFSEILSWLCKRHMVGKAVELLALMVGKNFSPGPKAWEILLLSSESELT 481

Query: 481 SLKSLETTLEDILGI 496
           S+KSLETTL+D++GI
Sbjct: 482 SVKSLETTLKDLVGI 491

BLAST of Cla018033 vs. NCBI nr
Match: gi|659083416|ref|XP_008442345.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Cucumis melo])

HSP 1 Score: 823.5 bits (2126), Expect = 1.9e-235
Identity = 414/495 (83.64%), Postives = 447/495 (90.30%), Query Frame = 1

Query: 1   MASFSVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYLL 60
           M SFSVVK SNNFLRKHR  PFS +KT WHQTF QDEALR LKQ+ANS +P       LL
Sbjct: 1   MGSFSVVKNSNNFLRKHRKWPFSSHKTTWHQTFDQDEALRILKQSANSHQPH-----LLL 60

Query: 61  SALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIK 120
           S LITSF +Y CHPTPNAYYFVLKTLARTSQFHHI PVL RLQ VE F+TPEY+FVDLIK
Sbjct: 61  STLITSFTSYSCHPTPNAYYFVLKTLARTSQFHHIPPVLHRLQFVEKFQTPEYIFVDLIK 120

Query: 121 VYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIR 180
           +YGR++RIQDA++LFRRIPMFRC PSTLSLNSLL LL RN +GL ++P+I+L+S +MGIR
Sbjct: 121 LYGRMNRIQDAVTLFRRIPMFRCFPSTLSLNSLLSLLSRNAQGLPMIPDILLNSHSMGIR 180

Query: 181 LEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVL 240
           LE STFRILI ALCK+NKVGHAMEIFNYMITEGYGLNP+ICSLIL SLC+QK +SGDVVL
Sbjct: 181 LEHSTFRILITALCKVNKVGHAMEIFNYMITEGYGLNPQICSLILGSLCQQKNSSGDVVL 240

Query: 241 SFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGV 300
           SFLEE RQKGFCP VVDYSNVIKFFVTRGMSSDA+ LLNKMKADGFKPDIVCYTMVLNGV
Sbjct: 241 SFLEETRQKGFCPAVVDYSNVIKFFVTRGMSSDAIDLLNKMKADGFKPDIVCYTMVLNGV 300

Query: 301 IADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNV 360
           IADGDY+MADELFDELLLFGLVPDIYTYNVYIHGLCKQGNS AG+QMISHME LGCKPNV
Sbjct: 301 IADGDYQMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSAAGLQMISHMEALGCKPNV 360

Query: 361 ITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEE 420
           ITYNILL+SLC TGEL+EARKLRSKMQLKGLAENLRTFRIMI+GLF NG+VIEAC LLEE
Sbjct: 361 ITYNILLKSLCITGELDEARKLRSKMQLKGLAENLRTFRIMIDGLFHNGEVIEACALLEE 420

Query: 421 MLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIELT 480
           ML SRFPPQISTF EILS LCKR MVGKALELLTLMV KNF PGPKAWEILLLSSE ELT
Sbjct: 421 MLRSRFPPQISTFSEILSRLCKRHMVGKALELLTLMVGKNFSPGPKAWEILLLSSESELT 480

Query: 481 SLKSLETTLEDILGI 496
           S+KSLETTL+D++GI
Sbjct: 481 SVKSLETTLKDLVGI 490

BLAST of Cla018033 vs. NCBI nr
Match: gi|645279621|ref|XP_008244810.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Prunus mume])

HSP 1 Score: 563.1 bits (1450), Expect = 4.7e-157
Identity = 284/479 (59.29%), Postives = 362/479 (75.57%), Query Frame = 1

Query: 1   MASFSVVKRSNNF-LRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYL 60
           M   S +K S+ F LRKHR  P SP+ TKWHQTF+Q++A ++LK+++    PP +   +L
Sbjct: 1   MVRASALKPSSKFFLRKHRKWPVSPHNTKWHQTFNQNQAFQSLKKSS----PPQNQPQHL 60

Query: 61  LSALITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLI 120
           LS LI SF +Y C P P AY FV+KTL +TSQF+ IA VLDRL+ VE F TPEY+F  LI
Sbjct: 61  LSTLIYSFNSYNCEPNPEAYNFVIKTLTKTSQFNDIASVLDRLEFVEKFNTPEYIFAHLI 120

Query: 121 KVYGRIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGI 180
             YG+  R Q AI LF RIP FRCVPS  SLNSLL++LC + EGL++VPEI+L S  M I
Sbjct: 121 SFYGQSKRTQGAIDLFYRIPKFRCVPSAHSLNSLLYVLCGSREGLKMVPEILLRSHIMSI 180

Query: 181 RLEDSTFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVV 240
           RLE+S+F+IL+ +LC I KVG+A+EI N MI+ GYGLN ++CSLIL+SLCEQK++SG  V
Sbjct: 181 RLEESSFQILVNSLCAIGKVGYAIEIMNCMISYGYGLNAKMCSLILSSLCEQKDSSGFEV 240

Query: 241 LSFLEEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNG 300
           L F+EEM++ GFCP ++DYSNVI++ V +G   DAL +L KMK +G KPDIVCYTMVL+G
Sbjct: 241 LGFVEEMKKLGFCPGMMDYSNVIRYMVKQGRGLDALNVLVKMKVEGIKPDIVCYTMVLHG 300

Query: 301 VIADGDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPN 360
           VIA+GDY+ ADELFDELLL GLVPD+YTYNVY++GLCKQ   + G++MIS MEELGCKPN
Sbjct: 301 VIAEGDYENADELFDELLLLGLVPDVYTYNVYVNGLCKQNKVKDGLKMISSMEELGCKPN 360

Query: 361 VITYNILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLE 420
           +ITYNILL+ LC  GEL+ AR+L S+M LKG+  NL+T RIM++GLF  GD+ EAC+ ++
Sbjct: 361 LITYNILLKGLCNNGELSRARELVSEMTLKGIGVNLQTHRIMLDGLFGQGDIDEACIFMD 420

Query: 421 EMLGSRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIE 479
           EML        S+F E++  LC++  V KA++LL  MV KN  PG KAWE LLLSS  E
Sbjct: 421 EMLDKFLCRFCSSFDEVIYGLCRKGSVCKAMDLLKKMVDKNVAPGAKAWEALLLSSGSE 475

BLAST of Cla018033 vs. NCBI nr
Match: gi|764599883|ref|XP_011466430.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 537.3 bits (1383), Expect = 2.7e-149
Identity = 270/472 (57.20%), Postives = 355/472 (75.21%), Query Frame = 1

Query: 5   SVVKRSNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSP-KPPNSDEPYLLSAL 64
           S+  RS  F+RKHR  P SPY TKWH+ F+Q +AL+TLK   +SP  PP +    LLS L
Sbjct: 6   SLTPRSKFFVRKHRKWPVSPYNTKWHKLFNQHQALQTLK---HSPLNPPQT----LLSTL 65

Query: 65  ITSFRAYCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYG 124
           I SF  + C PTP AY FVLKTL +TSQ  HI  VLDRL+ +E F  PE +F +LI+ YG
Sbjct: 66  IHSFNTFNCDPTPEAYNFVLKTLFKTSQLSHIPSVLDRLESIEKFHPPESIFANLIRFYG 125

Query: 125 RIDRIQDAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLED 184
             +R++DAI +F RIP FRC PS +SLNSLL++LC + EGL++VP+++++S+ MGIRLE+
Sbjct: 126 SANRVEDAIDVFCRIPKFRCDPSAVSLNSLLYVLCGSSEGLKMVPQVLMNSRAMGIRLEE 185

Query: 185 STFRILIAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFL 244
           S+FRILI+ALC+I  VG+A+EI   MI+ GY L+ +ICSL+L+SLCEQK   G  V+ F+
Sbjct: 186 SSFRILISALCRIGSVGYAIEIMKCMISNGYDLDVKICSLVLSSLCEQKGVGGLEVVGFV 245

Query: 245 EEMRQKGFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIAD 304
           EEM++ GFCP ++DYSNVI+  V +G   DAL +L KMK +G KPDIVCYTMVL GVIA+
Sbjct: 246 EEMKKVGFCPGMLDYSNVIRCLVKQGKGLDALRVLCKMKVEGMKPDIVCYTMVLYGVIAN 305

Query: 305 GDYKMADELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITY 364
           GDYK AD++FDELL+ GLVPD+YTYNVYI+GLC Q N EAGI+MI+ M+ELGC+PN+ITY
Sbjct: 306 GDYKNADKVFDELLVLGLVPDVYTYNVYINGLCNQNNVEAGIKMITCMDELGCRPNLITY 365

Query: 365 NILLESLCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLG 424
           N+LL++LCK  EL+ AR+L S+M L G+  NL+T  IM++GLF  GDV EAC+ +EEML 
Sbjct: 366 NLLLKALCKNEELSRARELVSEMTLNGVGVNLQTHIIMLDGLFCKGDVDEACIFMEEMLD 425

Query: 425 SRFPPQISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSS 476
                + S + +++  LC+R +V KA++LL  MV KN  PG +AWE LLLSS
Sbjct: 426 KFMCRRCSAYDDVIYGLCQRGLVCKAMDLLLKMVDKNVVPGARAWEALLLSS 470

BLAST of Cla018033 vs. NCBI nr
Match: gi|694395598|ref|XP_009373117.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g38420, mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 537.0 bits (1382), Expect = 3.6e-149
Identity = 279/479 (58.25%), Postives = 345/479 (72.03%), Query Frame = 1

Query: 10  SNNFLRKHRNRPFSPYKTKWHQTFHQDEALRTLKQAANSPKPPNSDEPYLLSALITSFRA 69
           S  FLRKHR  P SPY T+W Q F+Q +A ++LK++  +P        +LL  LI SF+ 
Sbjct: 11  SKFFLRKHRKWPVSPYNTRWQQIFNQSQAFQSLKKSLPAPC-------HLLPTLIYSFKT 70

Query: 70  YCCHPTPNAYYFVLKTLARTSQFHHIAPVLDRLQRVETFETPEYVFVDLIKVYGRIDRIQ 129
           Y   PTP AY+F LKTL +TSQF HI PVL +L++VE F TPE++F  LI  Y R  R Q
Sbjct: 71  YNADPTPEAYHFFLKTLTKTSQFDHIVPVLPQLEKVEKFGTPEHIFSHLIGFYDRWSRTQ 130

Query: 130 DAISLFRRIPMFRCVPSTLSLNSLLFLLCRNGEGLRIVPEIILHSQTMGIRLEDSTFRIL 189
           DAI LF RIP FRCVPS  SLN+LL +LC + EGL++VPEI L S  MGIRLE+S FRIL
Sbjct: 131 DAIDLFYRIPKFRCVPSAHSLNALLCVLCGSCEGLKLVPEIFLRSHVMGIRLEESRFRIL 190

Query: 190 IAALCKINKVGHAMEIFNYMITEGYGLNPRICSLILASLCEQKETSGDVVLSFLEEMRQK 249
           + ALC I KVG+A+EI N M+  GYGLN +IC+LIL+SLCEQK++   VV+ FL EM+  
Sbjct: 191 VNALCGIWKVGYAIEIMNCMMNNGYGLNVKICALILSSLCEQKDSECVVVMGFLGEMQIL 250

Query: 250 GFCPVVVDYSNVIKFFVTRGMSSDALVLLNKMKADGFKPDIVCYTMVLNGVIADGDYKMA 309
           GFCP ++DYSNVI+F V +G   DAL +L KMK +G KPDIVCYTMVL+GVIA+GD+K  
Sbjct: 251 GFCPGMIDYSNVIRFMVKQGRGLDALNVLVKMKEEGIKPDIVCYTMVLHGVIAEGDFKKV 310

Query: 310 DELFDELLLFGLVPDIYTYNVYIHGLCKQGNSEAGIQMISHMEELGCKPNVITYNILLES 369
           D++FDELL+FGLVPD+YTYNVYI+GLCKQ   E+G+ MIS MEELGCKPN+ITYNILL++
Sbjct: 311 DQVFDELLVFGLVPDVYTYNVYINGLCKQNRVESGLMMISSMEELGCKPNLITYNILLKA 370

Query: 370 LCKTGELNEARKLRSKMQLKGLAENLRTFRIMINGLFQNGDVIEACVLLEEMLGSRFPPQ 429
           LC +GEL  AR L  +M L G+  NL+T+RIM+ GLF  GD+ EACV +EEML       
Sbjct: 371 LCNSGELRRARNLMREMTLNGVGVNLQTYRIMLEGLFGKGDIEEACVFMEEMLDKVLVCF 430

Query: 430 ISTFGEILSWLCKRDMVGKALELLTLMVRKNFFPGPKAWEILLLSSEIELTSLKSLETT 489
            S+F  ++  LC+R +V KA ELL  MV K   PG KAWE LLLSS  E     SLE T
Sbjct: 431 CSSFDVVIYGLCQRGLVCKATELLKKMVAKKVDPGAKAWEALLLSSGSE----HSLEET 478

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP193_ARATH5.2e-10844.64Pentatricopeptide repeat-containing protein At2g38420, mitochondrial OS=Arabidop... [more]
PP281_ARATH1.0e-3925.82Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
PP247_ARATH1.8e-3927.72Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop... [more]
PPR91_ARATH2.3e-3928.32Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop... [more]
PPR90_ARATH3.9e-3927.30Pentatricopeptide repeat-containing protein At1g62590 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LA35_CUCSA4.1e-23783.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G730720 PE=4 SV=1[more]
A0A067JJ28_JATCU1.0e-14755.25Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00390 PE=4 SV=1[more]
V7B2Q8_PHAVU2.3e-14751.91Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G089500g PE=4 SV=1[more]
F6GXZ6_VITVI3.0e-14754.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g00830 PE=4 SV=... [more]
V4UT39_9ROSI3.0e-14755.07Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013613mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449440241|ref|XP_004137893.1|5.9e-23783.03PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial ... [more]
gi|659083416|ref|XP_008442345.1|1.9e-23583.64PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial ... [more]
gi|645279621|ref|XP_008244810.1|4.7e-15759.29PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial ... [more]
gi|764599883|ref|XP_011466430.1|2.7e-14957.20PREDICTED: pentatricopeptide repeat-containing protein At2g38420, mitochondrial ... [more]
gi|694395598|ref|XP_009373117.1|3.6e-14958.25PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At2g... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0005575 cellular_component
cellular_component GO:0043231 intracellular membrane-bounded organelle
molecular_function GO:0003674 molecular_function
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005515 protein binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU45894watermelon EST collection version 2.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla018033Cla018033.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU45894WMU45894transcribed_cluster


Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 118..139
score: 0.89coord: 185..213
score: 8.2E-4coord: 436..461
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 390..421
score: 5.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 253..300
score: 5.6E-9coord: 323..372
score: 5.3
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 361..391
score: 2.5E-6coord: 258..290
score: 2.0E-4coord: 397..428
score: 1.2E-5coord: 185..216
score: 9.8E-5coord: 432..463
score: 5.6E-4coord: 291..325
score: 1.6E-4coord: 326..360
score: 9.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 359..393
score: 11.411coord: 111..145
score: 7.794coord: 324..358
score: 12.419coord: 146..181
score: 5.733coord: 429..463
score: 8.736coord: 254..288
score: 8.692coord: 289..323
score: 9.668coord: 217..253
score: 8.539coord: 394..428
score: 10.424coord: 182..216
score: 9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 6..472
score: 1.9E
NoneNo IPR availablePANTHERPTHR24015:SF316SUBFAMILY NOT NAMEDcoord: 6..472
score: 1.9E

The following gene(s) are paralogous to this gene:

None