Cla017640 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla017640
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Harpin-induced protein-like (Fragment) (AHRD V1 **-- D2CFH8_COFAR); contains Interpro domain(s) IPR010847 Harpin-induced 1
Location	Chr10 : 24786346 .. 24786981 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCAAGCATACTTACCACCGTCCCAATCACCACCACAACCGCCGATGCTGCAGTTGCGGCGGCGGCTTCTTCATCACCTTTCTCAAGATCCTCATCGCTATCATCATCGTTGTTGGTCTCGCCGTGTTGATCTTATGGCTCATATTCCGTCCTAATAAAGTCAAATTCAACGTCACCGACGCTAAACTCACCCAATTCAATCTCACTGACAACCAGCTCCATTACAACTTGGCCCTCAACGTCACCGTCAGAAACCCCAACAAGCGAATCGGAGTCTACTACGATACTATCGAAGCCGCCGCCGTTTACAAAGACCAGCGTCTACAGACCCAGTGGCTGCCGCCGTTTTACCAAGGCCACAAGACCACCGTCGTCATCACCTCTGTTTTCTCCGGCCAGCAGCTCCTCCTCCTCGCTGGCCAGGGGCTAACGGAGTTCAACGCCGAGACAATTGCCGGCGTCTACGAGATGAACGTGGAGCTTAATCTTCGGATAAGGTTGAAGTTCGGCGCTGTTAGGATCGGAAAGTTTAAGCCGAAGGTGAATTGTGAGTTTAAAGTTCCGTTGAGTTCCGATGGAAGCTCAGTTGGTTGGGTGTTTCAGTCCACCGGCTGTGATATTCATTATTGGTGA

mRNA sequence

ATGGGCAAGCATACTTACCACCGTCCCAATCACCACCACAACCGCCGATGCTGCAGTTGCGGCGGCGGCTTCTTCATCACCTTTCTCAAGATCCTCATCGCTATCATCATCGTTGTTGGTCTCGCCGTGTTGATCTTATGGCTCATATTCCGTCCTAATAAAGTCAAATTCAACGTCACCGACGCTAAACTCACCCAATTCAATCTCACTGACAACCAGCTCCATTACAACTTGGCCCTCAACGTCACCGTCAGAAACCCCAACAAGCGAATCGGAGTCTACTACGATACTATCGAAGCCGCCGCCGTTTACAAAGACCAGCGTCTACAGACCCAGTGGCTGCCGCCGTTTTACCAAGGCCACAAGACCACCGTCGTCATCACCTCTGTTTTCTCCGGCCAGCAGCTCCTCCTCCTCGCTGGCCAGGGGCTAACGGAGTTCAACGCCGAGACAATTGCCGGCGTCTACGAGATGAACGTGGAGCTTAATCTTCGGATAAGGTTGAAGTTCGGCGCTGTTAGGATCGGAAAGTTTAAGCCGAAGGTGAATTGTGAGTTTAAAGTTCCGTTGAGTTCCGATGGAAGCTCAGTTGGTTGGGTGTTTCAGTCCACCGGCTGTGATATTCATTATTGGTGA

Coding sequence (CDS)

ATGGGCAAGCATACTTACCACCGTCCCAATCACCACCACAACCGCCGATGCTGCAGTTGCGGCGGCGGCTTCTTCATCACCTTTCTCAAGATCCTCATCGCTATCATCATCGTTGTTGGTCTCGCCGTGTTGATCTTATGGCTCATATTCCGTCCTAATAAAGTCAAATTCAACGTCACCGACGCTAAACTCACCCAATTCAATCTCACTGACAACCAGCTCCATTACAACTTGGCCCTCAACGTCACCGTCAGAAACCCCAACAAGCGAATCGGAGTCTACTACGATACTATCGAAGCCGCCGCCGTTTACAAAGACCAGCGTCTACAGACCCAGTGGCTGCCGCCGTTTTACCAAGGCCACAAGACCACCGTCGTCATCACCTCTGTTTTCTCCGGCCAGCAGCTCCTCCTCCTCGCTGGCCAGGGGCTAACGGAGTTCAACGCCGAGACAATTGCCGGCGTCTACGAGATGAACGTGGAGCTTAATCTTCGGATAAGGTTGAAGTTCGGCGCTGTTAGGATCGGAAAGTTTAAGCCGAAGGTGAATTGTGAGTTTAAAGTTCCGTTGAGTTCCGATGGAAGCTCAGTTGGTTGGGTGTTTCAGTCCACCGGCTGTGATATTCATTATTGGTGA

Protein sequence

MGKHTYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKLTQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTTVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNCEFKVPLSSDGSSVGWVFQSTGCDIHYW

Homology

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BLAST of Cla017640 vs. Swiss-Prot
Match: NHL3_ARATH (NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 4.4e-48
Identity = 100/213 (46.95%), Postives = 136/213 (63.85%), Query Frame = 1


Query: 10  NHHHNRR---------CCSCGGGFFITFL-KILIAIIIVVGLAVLILWLIFRPNKVKFNV 69
           +H H RR         C  C G   ++ +  ILI I +++G+A LI+WLIFRPN +KF+V
Sbjct: 20  SHSHGRRGGGCGCLGDCLGCCGCCILSVIFNILITIAVLLGIAALIIWLIFRPNAIKFHV 79

Query: 70  TDAKLTQFNLTD-NQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRL-QTQWLPPF 129
           TDAKLT+F L   N L YNL LN T+RNPN+RIGVYYD IE    Y DQR   +  +  F
Sbjct: 80  TDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEVRGYYGDQRFGMSNNISKF 139

Query: 130 YQGHKTTVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGK 189
           YQGHK T V+ +   GQQL+LL G    + N +  + +Y ++ +L L+IR KFG ++  +
Sbjct: 140 YQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWR 199

Query: 190 FKPKVNCEFKVPLSSDGSSVGWVFQSTGCDIHY 211
           FKPK+ C+ KVPL+S+ +S G+VFQ T CD+ +
Sbjct: 200 FKPKIKCDLKVPLTSNSTS-GFVFQPTKCDVDF 231

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BLAST of Cla017640 vs. Swiss-Prot
Match: YLS9_ARATH (Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.1e-45
Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 1


Query: 6   YHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKLT 65
           Y+R  H     CC         F+K++I++I+++G+A LI WLI RP  +KF+VTDA LT
Sbjct: 24  YYRRGHGRGCGCC-----LLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLT 83

Query: 66  QFNLT--DNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKT 125
           +F+ T  DN L YNLAL V VRNPNKRIG+YYD IEA A Y+ +R  T  L PFYQGHK 
Sbjct: 84  RFDHTSPDNILRYNLALTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKN 143

Query: 126 TVVITSVFSGQQLLLL-AGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKV 185
           T V+T  F GQ L++  AGQ  T  NAE I+GVY + ++  LR+R K G ++  + KPKV
Sbjct: 144 TTVLTPTFQGQNLVIFNAGQSRT-LNAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKV 203

Query: 186 NC-EFKVPLS-SDGSSVGWVFQSTGCDIHY 211
           +C + ++PLS S+G++         CD  +
Sbjct: 204 DCDDLRLPLSTSNGTTTTSTVFPIKCDFDF 227

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BLAST of Cla017640 vs. Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 7.6e-24
Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 1


Query: 51  RPNKVKFNVTDAKLTQFNL-TDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRL 110
           R N VKF V DA+LT F+L ++N L Y+L+LN+++RN    IG++YD  EA   Y +QRL
Sbjct: 3   RSNDVKFQVYDAELTHFDLESNNNLQYSLSLNLSIRNSKSSIGIHYDRFEATVYYMNQRL 62

Query: 111 QTQWLPPFYQGHKTTVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLK 170
               +P FY G K T+++ ++F GQ L+LL G    +F  +   GVY ++V+L++  R+ 
Sbjct: 63  GAVPMPLFYLGSKNTMLLRALFEGQTLVLLKGNERKKFEDDQKTGVYRIDVKLSINFRVM 122

Query: 171 FGAVRIGKFKPKVNCEFKVPLSSDGSS 197
              +     KP V C  K+PL+   S+
Sbjct: 123 VLHLVTWPMKPVVRCHLKIPLALGSSN 149

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BLAST of Cla017640 vs. Swiss-Prot
Match: NHL12_ARATH (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.1e-17
Identity = 54/179 (30.17%), Postives = 88/179 (49.16%), Query Frame = 1


Query: 21  GGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKLTQFNLTD-NQLHYNLA 80
           GGG       ++I  II+V + + ++W+I +P K +F + DA +  FNL+  N L  N  
Sbjct: 14  GGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLSQPNLLTSNFQ 73

Query: 81  LNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQW-LPPFYQGHKTTVVITSVFSGQQLLL 140
           + +  RN N RIG+YYD +   A Y++Q++  +  +PP YQGHK   V +    G   + 
Sbjct: 74  ITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVWSPFVYGNS-VP 133

Query: 141 LAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNCEFKVPLSSDGSSV 198
           +A         E   G   + +  + R+R K G +  GK+   V C+  + L+   + V
Sbjct: 134 IAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFINLADKAAGV 191

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BLAST of Cla017640 vs. Swiss-Prot
Match: Y1816_ARATH (Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.6e-08
Identity = 39/155 (25.16%), Postives = 69/155 (44.52%), Query Frame = 1


Query: 32  LIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKLTQFNLTDNQLHYNLALNVTVR--NPNK 91
           L+ + ++VGLA+LI +L  RP ++ + V  A + +F + +N  H N   +  ++  NP K
Sbjct: 44  LVLLGLLVGLAILITYLTLRPKRLIYTVEAASVQEFAIGNNDDHINAKFSYVIKSYNPEK 103

Query: 92  RIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTTVVITSVFSGQQLLLLAGQGLTEFNA 151
            + V Y ++  +  + +Q +  + + PF Q  K    I +       + L+     +  A
Sbjct: 104 HVSVRYHSMRISTAHHNQSVAHKNISPFKQRPKNETRIETQLVSHN-VALSKFNARDLRA 163

Query: 152 ETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 185
           E   G  EM V +  R+  K    R  +   K  C
Sbjct: 164 EKSKGTIEMEVYITARVSYKTWIFRSRRRTLKAVC 197

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BLAST of Cla017640 vs. TrEMBL
Match: A0A0A0LE50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G778990 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.0e-104
Identity = 188/211 (89.10%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 2   GKHTYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD 61
           GKHTYHRP HHHN   CSCGGG FITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD
Sbjct: 3   GKHTYHRPEHHHNHCRCSCGGGRFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD 62

Query: 62  AKLTQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGH 121
           AKLTQFNL  NQLHYNLALNVTVRNPNKRIGVYYD+IE++ +YKDQRL+TQWLPPFYQG+
Sbjct: 63  AKLTQFNLIGNQLHYNLALNVTVRNPNKRIGVYYDSIESSPIYKDQRLETQWLPPFYQGY 122

Query: 122 KTTVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPK 181
           KTT VI+ VFSGQQLLLLAGQGLTEFNAET+AGVYEMNVELNLRIRLKFGAVRIGKFKPK
Sbjct: 123 KTTAVISCVFSGQQLLLLAGQGLTEFNAETVAGVYEMNVELNLRIRLKFGAVRIGKFKPK 182

Query: 182 VNCEFKVPLSSDGSS-VGWVFQSTGCDIHYW 212
           VNCEFKVPLSSDG+S VG VF+STGCDI YW
Sbjct: 183 VNCEFKVPLSSDGNSVVGSVFESTGCDIDYW 213

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BLAST of Cla017640 vs. TrEMBL
Match: A0A0A0LGS5_CUCSA (Hairpin-inducing protein OS=Cucumis sativus GN=Csa_3G779010 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.8e-71
Identity = 132/206 (64.08%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           TYHR  H H R C  C      TFLK LIAI++V+G+AVL+ WL+FRPNK+KF+VT A+L
Sbjct: 23  TYHR--HGHGRGCACC---LLTTFLKFLIAIVVVLGVAVLVFWLVFRPNKLKFDVTGAQL 82

Query: 65  TQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 124
           T+FN++ NQLHY+LALN+TVRNPNKRIGVYYD IEA+  YKDQRL TQWL PFYQGHKTT
Sbjct: 83  TRFNVSGNQLHYDLALNLTVRNPNKRIGVYYDVIEASPYYKDQRLNTQWLTPFYQGHKTT 142

Query: 125 VVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 184
            V++  F GQQ+++ AG  LTEFN ET+AGV+E++V++ LR+RLK GAVRIGKF+PKVNC
Sbjct: 143 SVLSPQFDGQQIVIFAGDKLTEFNGETLAGVFEVDVKIRLRLRLKVGAVRIGKFRPKVNC 202

Query: 185 EFKVPLSSDGSSVGWVFQSTGCDIHY 211
           E KVPL S+ +S  + FQ+T CD  +
Sbjct: 203 ELKVPLKSNPNS--FTFQTTRCDFDF 221

[Close]

BLAST of Cla017640 vs. TrEMBL
Match: A0A0A0LBJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G779020 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.4e-69
Identity = 128/206 (62.14%), Postives = 164/206 (79.61%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           TYH   HH +RR C+C      TFLK+L+ I++VVG+AVLILW +FRP+K+ F+VTDA+L
Sbjct: 23  TYH---HHAHRRGCACC--LLTTFLKLLVTIVVVVGIAVLILWFLFRPHKLTFDVTDAEL 82

Query: 65  TQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 124
           T+FN++ NQLHYNLALN+T+RNPNKRIGVYYD IEA+  YKDQRL TQWLPPFYQGHKTT
Sbjct: 83  TRFNISGNQLHYNLALNLTIRNPNKRIGVYYDVIEASPFYKDQRLNTQWLPPFYQGHKTT 142

Query: 125 VVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 184
            V++  F GQQ++ LAG  LTEFN ET+AG++ +++   L++RLK G VRIGKFKPKVNC
Sbjct: 143 TVLSPHFDGQQIVFLAGDKLTEFNGETLAGIFNVDLRFRLQLRLKVGVVRIGKFKPKVNC 202

Query: 185 EFKVPLSSDGSSVGWVFQSTGCDIHY 211
           E KVPL S+ +S  ++ Q+T CD  +
Sbjct: 203 ELKVPLKSNANSFTFL-QATRCDFDF 222

[Close]

BLAST of Cla017640 vs. TrEMBL
Match: B9T2S1_RICCO (Syntaxin, plant, putative OS=Ricinus communis GN=RCOM_0437400 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 4.6e-60
Identity = 118/206 (57.28%), Postives = 150/206 (72.82%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           +YHRP     R  C CG       LKI+I I +V+GLAVLI WL+ RPNKVKF+VT+A L
Sbjct: 22  SYHRPG----RSGCGCGCCLLSCLLKIIITIAVVLGLAVLIFWLVVRPNKVKFHVTEANL 81

Query: 65  TQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 124
           ++FN+ +N LHYNLALN+TVRNPNK+IG+YYD IEA   Y+DQR  +Q+L PFYQGHK T
Sbjct: 82  SEFNINNNTLHYNLALNITVRNPNKKIGIYYDRIEARGKYEDQRFGSQFLTPFYQGHKNT 141

Query: 125 VVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 184
            ++T  F GQQL+LL+G  LT+FN E ++GVY ++V L L+IR K G ++IGKFKPK+ C
Sbjct: 142 SILTPAFQGQQLMLLSGDELTDFNEERVSGVYSIDVTLYLKIRFKIGDLKIGKFKPKIQC 201

Query: 185 EFKVPLSSDGSSVGWVFQSTGCDIHY 211
           E KVP  S+ S+V   FQ T CD  Y
Sbjct: 202 ELKVP--SNSSAV--PFQRTECDWDY 219

[Close]

BLAST of Cla017640 vs. TrEMBL
Match: A0A0D2MF43_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G235900 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-58
Identity = 111/207 (53.62%), Postives = 144/207 (69.57%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           TYHRP        C CG         I+I  I+++GLAV I WLIFRPNKVKF+VTD +L
Sbjct: 23  TYHRPGRGSG---CGCGCCLLKCLFNIIITAIVIIGLAVFIFWLIFRPNKVKFHVTDVQL 82

Query: 65  TQFNLTDNQ-LHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKT 124
           TQFNLT N  LHYNLALN+T+RNPN+RIG+YYD IEA A Y+DQR  T+ L PFYQGHK 
Sbjct: 83  TQFNLTSNNTLHYNLALNMTIRNPNRRIGIYYDRIEARAYYEDQRFDTETLTPFYQGHKN 142

Query: 125 TVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVN 184
           T  +  VF GQQ + L     +EFN + + GVY+++V+L LRIR K G V+ G+FKP+++
Sbjct: 143 TSYLNPVFVGQQFVRLGADETSEFNEDRVNGVYDIDVKLYLRIRFKLGRVKTGRFKPRIS 202

Query: 185 CEFKVPLSSDGSSVGWVFQSTGCDIHY 211
           C+ KVPL++   S G  F++T CD+ +
Sbjct: 203 CDLKVPLNTGNGSFGGTFKTTRCDLDF 226

[Close]

BLAST of Cla017640 vs. NCBI nr
Match: gi|778684445|ref|XP_011652030.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 385.6 bits (989), Expect = 5.7e-104
Identity = 188/211 (89.10%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 2   GKHTYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD 61
           GKHTYHRP HHHN   CSCGGG FITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD
Sbjct: 3   GKHTYHRPEHHHNHCRCSCGGGRFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD 62

Query: 62  AKLTQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGH 121
           AKLTQFNL  NQLHYNLALNVTVRNPNKRIGVYYD+IE++ +YKDQRL+TQWLPPFYQG+
Sbjct: 63  AKLTQFNLIGNQLHYNLALNVTVRNPNKRIGVYYDSIESSPIYKDQRLETQWLPPFYQGY 122

Query: 122 KTTVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPK 181
           KTT VI+ VFSGQQLLLLAGQGLTEFNAET+AGVYEMNVELNLRIRLKFGAVRIGKFKPK
Sbjct: 123 KTTAVISCVFSGQQLLLLAGQGLTEFNAETVAGVYEMNVELNLRIRLKFGAVRIGKFKPK 182

Query: 182 VNCEFKVPLSSDGSS-VGWVFQSTGCDIHYW 212
           VNCEFKVPLSSDG+S VG VF+STGCDI YW
Sbjct: 183 VNCEFKVPLSSDGNSVVGSVFESTGCDIDYW 213

[Close]

BLAST of Cla017640 vs. NCBI nr
Match: gi|659084476|ref|XP_008442907.1| (PREDICTED: protein YLS9-like [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 7.4e-104
Identity = 187/211 (88.63%), Postives = 198/211 (93.84%), Query Frame = 1


Query: 2   GKHTYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD 61
           GKHTYHRP HHHN   CSCGGG FITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD
Sbjct: 3   GKHTYHRPEHHHNHCRCSCGGGRFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTD 62

Query: 62  AKLTQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGH 121
           AKLTQFNL DNQLH+N ALNVTVRNPNKRIGVYYDTIE++A+YK+QRLQTQWLPPFYQG+
Sbjct: 63  AKLTQFNLIDNQLHFNFALNVTVRNPNKRIGVYYDTIESSAIYKNQRLQTQWLPPFYQGY 122

Query: 122 KTTVVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPK 181
           KTT VI+ VFSGQQLLLLAGQGLTEFNAE +AGVYEMN+ELNLRIRLKFGAVR+GKFKPK
Sbjct: 123 KTTAVISCVFSGQQLLLLAGQGLTEFNAERVAGVYEMNMELNLRIRLKFGAVRVGKFKPK 182

Query: 182 VNCEFKVPLSSDGSS-VGWVFQSTGCDIHYW 212
           VNCEFKVPLSSDGSS VG VF+STGCDI YW
Sbjct: 183 VNCEFKVPLSSDGSSVVGSVFESTGCDIDYW 213

[Close]

BLAST of Cla017640 vs. NCBI nr
Match: gi|449437456|ref|XP_004136508.1| (PREDICTED: protein YLS9 [Cucumis sativus])

HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70
Identity = 132/206 (64.08%), Postives = 165/206 (80.10%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           TYHR  H H R C  C      TFLK LIAI++V+G+AVL+ WL+FRPNK+KF+VT A+L
Sbjct: 23  TYHR--HGHGRGCACC---LLTTFLKFLIAIVVVLGVAVLVFWLVFRPNKLKFDVTGAQL 82

Query: 65  TQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 124
           T+FN++ NQLHY+LALN+TVRNPNKRIGVYYD IEA+  YKDQRL TQWL PFYQGHKTT
Sbjct: 83  TRFNVSGNQLHYDLALNLTVRNPNKRIGVYYDVIEASPYYKDQRLNTQWLTPFYQGHKTT 142

Query: 125 VVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 184
            V++  F GQQ+++ AG  LTEFN ET+AGV+E++V++ LR+RLK GAVRIGKF+PKVNC
Sbjct: 143 SVLSPQFDGQQIVIFAGDKLTEFNGETLAGVFEVDVKIRLRLRLKVGAVRIGKFRPKVNC 202

Query: 185 EFKVPLSSDGSSVGWVFQSTGCDIHY 211
           E KVPL S+ +S  + FQ+T CD  +
Sbjct: 203 ELKVPLKSNPNS--FTFQTTRCDFDF 221

[Close]

BLAST of Cla017640 vs. NCBI nr
Match: gi|659084478|ref|XP_008442908.1| (PREDICTED: protein YLS9 [Cucumis melo])

HSP 1 Score: 272.7 bits (696), Expect = 5.4e-70
Identity = 132/206 (64.08%), Postives = 161/206 (78.16%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           TYHR  H H R C  C      TFLK  IAI++V+G+ VL+LWL+FRPNK+KF+VT A+L
Sbjct: 23  TYHR--HGHGRGCACC---LLTTFLKFFIAIVVVLGVTVLVLWLVFRPNKLKFHVTGAEL 82

Query: 65  TQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 124
           T+FN++ NQLHYNLALN+TVRNPNKRIGVYYD IEA+  YKDQRL TQWL PFYQGHKTT
Sbjct: 83  TRFNVSGNQLHYNLALNLTVRNPNKRIGVYYDVIEASPYYKDQRLNTQWLTPFYQGHKTT 142

Query: 125 VVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 184
            V++  F GQQ++  AG  LTEFN ET+AG++E++V+  LR+RLK GAVRIGKFKPKVNC
Sbjct: 143 TVLSPHFDGQQIVFFAGDKLTEFNGETLAGIFEVDVKFRLRLRLKVGAVRIGKFKPKVNC 202

Query: 185 EFKVPLSSDGSSVGWVFQSTGCDIHY 211
           E KVPL S+ +S    FQ+T CD  +
Sbjct: 203 ELKVPLKSNPNSF-TSFQTTRCDFDF 222

[Close]

BLAST of Cla017640 vs. NCBI nr
Match: gi|778684454|ref|XP_011652031.1| (PREDICTED: protein YLS9-like [Cucumis sativus])

HSP 1 Score: 270.8 bits (691), Expect = 2.0e-69
Identity = 128/206 (62.14%), Postives = 164/206 (79.61%), Query Frame = 1


Query: 5   TYHRPNHHHNRRCCSCGGGFFITFLKILIAIIIVVGLAVLILWLIFRPNKVKFNVTDAKL 64
           TYH   HH +RR C+C      TFLK+L+ I++VVG+AVLILW +FRP+K+ F+VTDA+L
Sbjct: 23  TYH---HHAHRRGCACC--LLTTFLKLLVTIVVVVGIAVLILWFLFRPHKLTFDVTDAEL 82

Query: 65  TQFNLTDNQLHYNLALNVTVRNPNKRIGVYYDTIEAAAVYKDQRLQTQWLPPFYQGHKTT 124
           T+FN++ NQLHYNLALN+T+RNPNKRIGVYYD IEA+  YKDQRL TQWLPPFYQGHKTT
Sbjct: 83  TRFNISGNQLHYNLALNLTIRNPNKRIGVYYDVIEASPFYKDQRLNTQWLPPFYQGHKTT 142

Query: 125 VVITSVFSGQQLLLLAGQGLTEFNAETIAGVYEMNVELNLRIRLKFGAVRIGKFKPKVNC 184
            V++  F GQQ++ LAG  LTEFN ET+AG++ +++   L++RLK G VRIGKFKPKVNC
Sbjct: 143 TVLSPHFDGQQIVFLAGDKLTEFNGETLAGIFNVDLRFRLQLRLKVGVVRIGKFKPKVNC 202

Query: 185 EFKVPLSSDGSSVGWVFQSTGCDIHY 211
           E KVPL S+ +S  ++ Q+T CD  +
Sbjct: 203 ELKVPLKSNANSFTFL-QATRCDFDF 222

The following BLAST results are available for this feature:

BLAST of Cla017640 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NHL3_ARATH	4.4e-48	46.95	NDR1/HIN1-Like protein 3 OS=Arabidopsis thaliana GN=NHL3 PE=1 SV=1	[more]
YLS9_ARATH	2.1e-45	47.14	Protein YLS9 OS=Arabidopsis thaliana GN=YLS9 PE=2 SV=1	[more]
SYP24_ARATH	7.6e-24	39.46	Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1	[more]
NHL12_ARATH	1.1e-17	30.17	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana GN=NHL12 PE=2 SV=1	[more]
Y1816_ARATH	7.6e-08	25.16	Uncharacterized protein At1g08160 OS=Arabidopsis thaliana GN=At1g08160 PE=2 SV=1	[more]

BLAST of Cla017640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE50_CUCSA	4.0e-104	89.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G778990 PE=4 SV=1	[more]
A0A0A0LGS5_CUCSA	9.8e-71	64.08	Hairpin-inducing protein OS=Cucumis sativus GN=Csa_3G779010 PE=4 SV=1	[more]
A0A0A0LBJ4_CUCSA	1.4e-69	62.14	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G779020 PE=4 SV=1	[more]
B9T2S1_RICCO	4.6e-60	57.28	Syntaxin, plant, putative OS=Ricinus communis GN=RCOM_0437400 PE=4 SV=1	[more]
A0A0D2MF43_GOSRA	1.5e-58	53.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G235900 PE=4 SV=1	[more]

BLAST of Cla017640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778684445\|ref\|XP_011652030.1\|	5.7e-104	89.10	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]
gi\|659084476\|ref\|XP_008442907.1\|	7.4e-104	88.63	PREDICTED: protein YLS9-like [Cucumis melo]	[more]
gi\|449437456\|ref\|XP_004136508.1\|	1.4e-70	64.08	PREDICTED: protein YLS9 [Cucumis sativus]	[more]
gi\|659084478\|ref\|XP_008442908.1\|	5.4e-70	64.08	PREDICTED: protein YLS9 [Cucumis melo]	[more]
gi\|778684454\|ref\|XP_011652031.1\|	2.0e-69	62.14	PREDICTED: protein YLS9-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla017640	Cla017640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA-14	PFAM	PF03168	LEA_2	coord: 81..184 score: 7.9
None	No IPR available	PANTHER	PTHR31415	FAMILY NOT NAMED	coord: 15..210 score: 1.6E
None	No IPR available	PANTHER	PTHR31415:SF4	HARPIN-INDUCED PROTEIN-LIKE-RELATED	coord: 15..210 score: 1.6E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla017640	CSPI03G35480	Wild cucumber (PI 183967)	cpiwmB198
Cla017640	MELO3C009526.2	Melon (DHL92) v3.6.1	medwmB344
Cla017640	CsaV3_3G037820	Cucumber (Chinese Long) v3	cucwmB208

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla017640	Wax gourd	wgowmB011
Cla017640	Wax gourd	wgowmB363
Cla017640	Wax gourd	wgowmB410
Cla017640	Watermelon (97103) v1	wmwmB052
Cla017640	Cucumber (Gy14) v1	cgywmB088
Cla017640	Cucumber (Gy14) v1	cgywmB352
Cla017640	Cucumber (Gy14) v1	cgywmB456
Cla017640	Cucurbita maxima (Rimu)	cmawmB228
Cla017640	Cucurbita maxima (Rimu)	cmawmB511
Cla017640	Cucurbita maxima (Rimu)	cmawmB552
Cla017640	Cucurbita maxima (Rimu)	cmawmB612
Cla017640	Cucurbita maxima (Rimu)	cmawmB788
Cla017640	Cucurbita maxima (Rimu)	cmawmB812
Cla017640	Cucurbita moschata (Rifu)	cmowmB214
Cla017640	Cucurbita moschata (Rifu)	cmowmB544
Cla017640	Cucurbita moschata (Rifu)	cmowmB605
Cla017640	Cucurbita moschata (Rifu)	cmowmB782
Cla017640	Cucurbita moschata (Rifu)	cmowmB804
Cla017640	Wild cucumber (PI 183967)	cpiwmB008
Cla017640	Wild cucumber (PI 183967)	cpiwmB467
Cla017640	Wild cucumber (PI 183967)	cpiwmB469
Cla017640	Melon (DHL92) v3.5.1	mewmB346
Cla017640	Melon (DHL92) v3.5.1	mewmB398
Cla017640	Melon (DHL92) v3.5.1	mewmB553
Cla017640	Watermelon (Charleston Gray)	wcgwmB051
Cla017640	Watermelon (Charleston Gray)	wcgwmB175
Cla017640	Cucumber (Chinese Long) v2	cuwmB007
Cla017640	Cucumber (Chinese Long) v2	cuwmB198
Cla017640	Cucumber (Chinese Long) v2	cuwmB454
Cla017640	Cucurbita pepo (Zucchini)	cpewmB277
Cla017640	Cucurbita pepo (Zucchini)	cpewmB474
Cla017640	Cucurbita pepo (Zucchini)	cpewmB597
Cla017640	Cucurbita pepo (Zucchini)	cpewmB827
Cla017640	Bottle gourd (USVL1VR-Ls)	lsiwmB048
Cla017640	Bottle gourd (USVL1VR-Ls)	lsiwmB127
Cla017640	Bottle gourd (USVL1VR-Ls)	lsiwmB240
Cla017640	Cucumber (Gy14) v2	cgybwmB007
Cla017640	Cucumber (Gy14) v2	cgybwmB187
Cla017640	Cucumber (Gy14) v2	cgybwmB423
Cla017640	Cucumber (Gy14) v2	cgybwmB425
Cla017640	Melon (DHL92) v3.6.1	medwmB390
Cla017640	Melon (DHL92) v3.6.1	medwmB539
Cla017640	Silver-seed gourd	carwmB0225
Cla017640	Silver-seed gourd	carwmB0237
Cla017640	Silver-seed gourd	carwmB0411
Cla017640	Silver-seed gourd	carwmB0677
Cla017640	Silver-seed gourd	carwmB0800
Cla017640	Silver-seed gourd	carwmB0918
Cla017640	Cucumber (Chinese Long) v3	cucwmB009
Cla017640	Cucumber (Chinese Long) v3	cucwmB477
Cla017640	Cucumber (Chinese Long) v3	cucwmB479
Cla017640	Watermelon (97103) v2	wmwmbB062
Cla017640	Watermelon (97103) v2	wmwmbB051