Cla017372 (gene) Watermelon (97103) v1

Overview
NameCla017372
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr10 : 16651881 .. 16652197 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAAGATACTAACCAAGTTTGAGAAGCAGTTTTTTGCATATCTTGCAAACCCTAGACGGGTCAATGAGACTCGTGGGATTGTTATGAGCATACAGAAGCTGTTATGGTTTATGAACTTGCTGACACCGGACATTTTCATCGATGACAATGTAAGTAAAGTTTATTGCAACATTCTCATGGCGTATTATTGGCGTTTTTTGTTTACAAATTAATTGTTTTTTTGTTGTAGACAATTGGCACATTATTTTTGTTCACCCAAAAGAAATTGTGGGATAATGTCGATCCAACCCATGTGAAGAAGAAATTTATGTAG

mRNA sequence

ATGGCTAAGATACTAACCAAGTTTGAGAAGCAGTTTTTTGCATATCTTGCAAACCCTAGACGGGTCAATGAGACTCGTGGGATTGTTATGAGCATACAGAAGCTGTTATGGTTTATGAACTTGCTGACACCGGACATTTTCATCGATGACAATACAATTGGCACATTATTTTTGTTCACCCAAAAGAAATTGTGGGATAATGTCGATCCAACCCATGTGAAGAAGAAATTTATGTAG

Coding sequence (CDS)

ATGGCTAAGATACTAACCAAGTTTGAGAAGCAGTTTTTTGCATATCTTGCAAACCCTAGACGGGTCAATGAGACTCGTGGGATTGTTATGAGCATACAGAAGCTGTTATGGTTTATGAACTTGCTGACACCGGACATTTTCATCGATGACAATACAATTGGCACATTATTTTTGTTCACCCAAAAGAAATTGTGGGATAATGTCGATCCAACCCATGTGAAGAAGAAATTTATGTAG

Protein sequence

MAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDIFIDDNTIGTLFLFTQKKLWDNVDPTHVKKKFM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0008234 cysteine-type peptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla017372Cla017372.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla017372Cla97C10G194160Watermelon (97103) v2wmwmbB051
Cla017372ClCG10G011300Watermelon (Charleston Gray)wcgwmB051
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla017372Bottle gourd (USVL1VR-Ls)lsiwmB178
Cla017372Bottle gourd (USVL1VR-Ls)lsiwmB240
Cla017372Cucumber (Gy14) v2cgybwmB537
Cla017372Cucumber (Gy14) v2cgybwmB269
Cla017372Melon (DHL92) v3.6.1medwmB213
Cla017372Melon (DHL92) v3.6.1medwmB483
Cla017372Silver-seed gourdcarwmB0068
Cla017372Silver-seed gourdcarwmB0108
Cla017372Silver-seed gourdcarwmB0452
Cla017372Silver-seed gourdcarwmB0759
Cla017372Silver-seed gourdcarwmB0816
Cla017372Cucumber (Chinese Long) v3cucwmB300
Cla017372Cucumber (Chinese Long) v3cucwmB601
Cla017372Watermelon (97103) v2wmwmbB069
Cla017372Watermelon (97103) v2wmwmbB075
Cla017372Wax gourdwgowmB007
Cla017372Watermelon (97103) v1wmwmB008
Cla017372Watermelon (97103) v1wmwmB056
Cla017372Cucumber (Gy14) v1cgywmB115
Cla017372Cucumber (Gy14) v1cgywmB404
Cla017372Cucurbita maxima (Rimu)cmawmB227
Cla017372Cucurbita maxima (Rimu)cmawmB335
Cla017372Cucurbita maxima (Rimu)cmawmB336
Cla017372Cucurbita maxima (Rimu)cmawmB416
Cla017372Cucurbita maxima (Rimu)cmawmB862
Cla017372Cucurbita moschata (Rifu)cmowmB213
Cla017372Cucurbita moschata (Rifu)cmowmB332
Cla017372Cucurbita moschata (Rifu)cmowmB410
Cla017372Cucurbita moschata (Rifu)cmowmB849
Cla017372Wild cucumber (PI 183967)cpiwmB291
Cla017372Wild cucumber (PI 183967)cpiwmB593
Cla017372Melon (DHL92) v3.5.1mewmB090
Cla017372Melon (DHL92) v3.5.1mewmB216
Cla017372Melon (DHL92) v3.5.1mewmB497
Cla017372Watermelon (Charleston Gray)wcgwmB016
Cla017372Watermelon (Charleston Gray)wcgwmB320
Cla017372Cucumber (Chinese Long) v2cuwmB290
Cla017372Cucumber (Chinese Long) v2cuwmB574
Cla017372Cucurbita pepo (Zucchini)cpewmB140
Cla017372Cucurbita pepo (Zucchini)cpewmB141
Cla017372Cucurbita pepo (Zucchini)cpewmB322
Cla017372Cucurbita pepo (Zucchini)cpewmB539
Cla017372Cucurbita pepo (Zucchini)cpewmB595