Cla017064 (gene) Watermelon (97103) v1

Overview
NameCla017064
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionLeaf senescence protein-like (AHRD V1 *-*- Q5VQ36_ORYSJ)
LocationChr10 : 20422265 .. 20423315 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTCTCAAACTCTCATTTGGCAGAGAAATCCCATCATGATCGCCATTTGCAGAGGGAGAGATGGGCTTGGTTTGGCCCTCTGTTATGGTCATTCCTAGGAATTACCGCCATTGTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTCTTACCCCTCCAAACCCATTTCTTGTTCTTCGTCCAAAGCTTCTCGGCCTTCAATCCGTTCATGATCCCATCGCCAGCCCTCCAAAAGGTAACACTCAAACTCCAATTCCCATAACCCACTTCTCCATTCTCATTGATTCTTACGTTAGATCCTTAAATGGAGGGGTTGCTCTGTTTTTCTGCAGAGAAACATAGGTGCAATTTGTTCAAAGGGAATTGGGTGAAGGACGTAAAACGGGCAGCGATGTACACAAATTGGAGCTGCCCCACGATTCCTGAATCGAAAAATTGTTTTAAACAGGGGAGAAAGGATATGGATTTTGTGAATTGGAGATGGAAACCAGATGAATGTGAGCTTCCAAGGTTCGATTCAATGGCGTTTCTTCATCTTCTTCGTGGGAAGAAACTCGCATTTATCGGTGATTCTGTTGCCAGAAATCACATGGAATCTCTTCTCTGTATCTTATCGCAGGTTCATTCCATCTCTTTCTATTGTTCTTTCTTAATCTATTTCTGTTTTTTGGTTAAATTTTGGAAATGGGTATTGATGATTCTGATTCTTTGCTTGCTTTGCATGCATTTGATTGTGGAATGAAAATGTCAATCTGTGTGAATTGTGTTACTTTTTGGTTTTTTGGGTGCAATCAAATCAAAAAGTATAAGGAATGGAATAATGATGGAGGAATTTGGTTTTGTGGCTTTGGGAAATTGTCATTATTTGGTAAATGCTCTTCCTCCATGGATGAATTCATGGGCTCAGCATTTTACCTTTCTTCAACCTTTTTCTTCTCTTCAGAAAAATGTTTTTTCATTTTTTTTAAAAATTATTTCTTCTTATTGCTACTTTGAAGAACATAATTCAACCAATATAATAACTCAACAGATATGTAGGTAA

mRNA sequence

ATGAGATTCTCAAACTCTCATTTGGCAGAGAAATCCCATCATGATCGCCATTTGCAGAGGGAGAGATGGGCTTGGTTTGGCCCTCTGTTATGGTCATTCCTAGGAATTACCGCCATTGTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTCTTACCCCTCCAAACCCATTTCTTGTTCTTCGTCCAAAGCTTCTCGGCCTTCAATCCGTTCATGATCCCATCGCCAGCCCTCCAAAAGAGAAACATAGGTGCAATTTGTTCAAAGGGAATTGGGTGAAGGACGTAAAACGGGCAGCGATGTACACAAATTGGAGCTGCCCCACGATTCCTGAATCGAAAAATTGTTTTAAACAGGGGAGAAAGGATATGGATTTTGTGAATTGGAGATGGAAACCAGATGAATGTGAGCTTCCAAGGTTCGATTCAATGGCGTTTCTTCATCTTCTTCGTGGGAAGAAACTCGCATTTATCGGTGATTCTGTTGCCAGAAATCACATGGAATCTCTTCTCTGTATCTTATCGCAGATATGTAGGTAA

Coding sequence (CDS)

ATGAGATTCTCAAACTCTCATTTGGCAGAGAAATCCCATCATGATCGCCATTTGCAGAGGGAGAGATGGGCTTGGTTTGGCCCTCTGTTATGGTCATTCCTAGGAATTACCGCCATTGTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCTCTTACCCCTCCAAACCCATTTCTTGTTCTTCGTCCAAAGCTTCTCGGCCTTCAATCCGTTCATGATCCCATCGCCAGCCCTCCAAAAGAGAAACATAGGTGCAATTTGTTCAAAGGGAATTGGGTGAAGGACGTAAAACGGGCAGCGATGTACACAAATTGGAGCTGCCCCACGATTCCTGAATCGAAAAATTGTTTTAAACAGGGGAGAAAGGATATGGATTTTGTGAATTGGAGATGGAAACCAGATGAATGTGAGCTTCCAAGGTTCGATTCAATGGCGTTTCTTCATCTTCTTCGTGGGAAGAAACTCGCATTTATCGGTGATTCTGTTGCCAGAAATCACATGGAATCTCTTCTCTGTATCTTATCGCAGATATGTAGGTAA

Protein sequence

MRFSNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLRPKLLGLQSVHDPIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFKQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQICR
Homology
[Close]
BLAST of Cla017064 vs. Swiss-Prot
Match: TBL22_ARATH (Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana GN=AXY4L PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 9.6e-36
Identity = 87/181 (48.07%), Postives = 104/181 (57.46%), Query Frame = 1 

Query: 1   MRFSNSHLAEKSHHDRHLQRERWAW-----FGPLLWSFLGITAIVSFFFFFFFFFSSLTP 60
           M+ S+S   E S      + ERW       F P   S   IT   + FF +   F S+  
Sbjct: 1   MKSSSSIFRETSEK----KSERWMMMNIGRFSPFFLSSFCITLFFTGFFVYQNPFKSIAD 60

Query: 61  PNPFLVLRPKLLGLQSVHDPIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESK 120
            N        +L  Q   DP          C+LFKG+WV D KR ++YTN SC TIP+SK
Sbjct: 61  QN--------VLSFQPQIDP---------ECDLFKGHWVPD-KRGSLYTNSSCATIPDSK 120

Query: 121 NCFKQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCIL 177
           NC KQGR D DF+ WRWKPD C+LPRF+  AFL ++RGKK+ FIGDSVARNHMESLLC+L
Sbjct: 121 NCIKQGRPDKDFLFWRWKPDGCDLPRFNPKAFLSMVRGKKMNFIGDSVARNHMESLLCLL 159

[Close]
BLAST of Cla017064 vs. Swiss-Prot
Match: TBL20_ARATH (Protein trichome birefringence-like 20 OS=Arabidopsis thaliana GN=TBL20 PE=2 SV=2)

HSP 1 Score: 122.1 bits (305), Expect = 6.3e-27
Identity = 50/98 (51.02%), Postives = 70/98 (71.43%), Query Frame = 1 

Query: 81  KEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFKQGRKDMDFVNWRWKPDECELP 140
           K K +C++F G W+ + K A  YTN +C  I E +NC K GR D+ F+ WRWKP EC+LP
Sbjct: 122 KRKRKCDIFSGEWIPNPK-APYYTNTTCRAIHEHQNCIKYGRPDLGFMKWRWKPKECDLP 181

Query: 141 RFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQI 179
            FD   FL ++RG ++AF+GDSV+RNH++SL+C+LS++
Sbjct: 182 LFDPYEFLEIVRGTRMAFVGDSVSRNHVQSLICLLSRV 218

[Close]
BLAST of Cla017064 vs. Swiss-Prot
Match: TBL18_ARATH (Protein trichome birefringence-like 18 OS=Arabidopsis thaliana GN=TBL18 PE=2 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-26
Identity = 53/105 (50.48%), Postives = 70/105 (66.67%), Query Frame = 1 

Query: 74  DPIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFKQGRKDMDFVNWRWK 133
           D ++     +  C+L++G+W  D     +YTN SCP + + +NC   GR D  + NWRWK
Sbjct: 163 DDVSETASAEPECDLYQGSWFYD-PGGPLYTNNSCPVLTQMQNCQGNGRPDKGYENWRWK 222

Query: 134 PDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQI 179
           P +CELPRFD+  FL L++GK LAFIGDSVARN MES+LC+L Q+
Sbjct: 223 PSQCELPRFDARKFLELMKGKTLAFIGDSVARNQMESMLCLLWQV 266

[Close]
BLAST of Cla017064 vs. Swiss-Prot
Match: TBL17_ARATH (Protein YLS7 OS=Arabidopsis thaliana GN=YLS7 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 4.1e-26
Identity = 54/105 (51.43%), Postives = 69/105 (65.71%), Query Frame = 1 

Query: 74  DPIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFKQGRKDMDFVNWRWK 133
           D  A+    +  C+L+ GNW  D     +YTN SCP + + +NC   GR D  + NWRWK
Sbjct: 126 DEEATQDHVETECDLYHGNWFYD-PMGPLYTNNSCPLLTQMQNCQGNGRPDKGYENWRWK 185

Query: 134 PDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQI 179
           P +C+LPRFD+  FL L+RGK LAFIGDSVARN MES++C+L Q+
Sbjct: 186 PSQCDLPRFDAKKFLELMRGKTLAFIGDSVARNQMESMMCLLWQV 229

[Close]
BLAST of Cla017064 vs. Swiss-Prot
Match: TBL23_ARATH (Protein trichome birefringence-like 23 OS=Arabidopsis thaliana GN=TBL23 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.0e-26
Identity = 63/143 (44.06%), Postives = 82/143 (57.34%), Query Frame = 1 

Query: 43  FFFFFFFFSSLTPP------NPFLVLRPKLLGLQSVHDPIASPPKEKHRCNLFKGNWVKD 102
           F FF F F   +P       N    + P  + L    D I     E  +C+LF G W+KD
Sbjct: 31  FRFFVFRFGQFSPVQVSVTGNSNSQISPTSVILSDNEDQIPVDI-EVEKCDLFTGKWIKD 90

Query: 103 VKRAAMYTNWSCPTIPES-KNCFKQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKK 162
                +YTN SC  + ++ +NC   GR D  F+NW+WKP++C LPRFDS+ FL L+R K 
Sbjct: 91  -PLGPIYTNESCGIVVDAHQNCITNGRPDSGFLNWKWKPNDCSLPRFDSLRFLQLMRNKS 150

Query: 163 LAFIGDSVARNHMESLLCILSQI 179
            A IGDS+ARNH+ESLLC+LS +
Sbjct: 151 WAIIGDSIARNHVESLLCMLSTV 171

[Close]
BLAST of Cla017064 vs. TrEMBL
Match: A0A0A0LFF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829240 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 3.2e-86
Identity = 155/179 (86.59%), Postives = 162/179 (90.50%), Query Frame = 1 

Query: 1   MRFSNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFL 60
           M+FS+SHL EKSHH+R  QRE+W WF PLLWSFLG+TAIVSFFFF F   SSL+PPNPFL
Sbjct: 1   MKFSSSHLGEKSHHNRLSQREKWGWFTPLLWSFLGMTAIVSFFFFSF---SSLSPPNPFL 60

Query: 61  VLRPKLLGLQSV-HDPIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFK 120
           VLRPKLLGLQSV HDPIASPPKEK RCNLFKGNWVKDVK A  YTNWSCPTIPESKNCFK
Sbjct: 61  VLRPKLLGLQSVVHDPIASPPKEKQRCNLFKGNWVKDVKGAVTYTNWSCPTIPESKNCFK 120

Query: 121 QGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQI 179
           QGRKD  FVNWRWKPDECELPRFD MAFLHLLRGKKLAFIGDSVARNHMESLLCILSQ+
Sbjct: 121 QGRKDAGFVNWRWKPDECELPRFDPMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQV 176

[Close]
BLAST of Cla017064 vs. TrEMBL
Match: B9RUD4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0851870 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.5e-40
Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 1 

Query: 4   SNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLR 63
           S+S L+  +  D+ +  ER A   P L SFL +T I S F  +         PNPF  + 
Sbjct: 7   SSSSLSPYNKKDKCIDMERVA---PFLLSFLFLTTIFSLFLLY--------SPNPFKPII 66

Query: 64  PKLLGLQSVHDP-----IASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCF 123
           PK       HD      + +  KE+  C+LFKG W+ D+K  + YTN SC TIP SKNCF
Sbjct: 67  PK-------HDRDQKLLLINSQKEEENCDLFKGQWIPDLK-GSQYTNSSCTTIPNSKNCF 126

Query: 124 KQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQ 178
           + GRKD DF+ WRWKPD+C+LPRFDS AFL ++RGK LAFIGDSVARNHMESLLC+LSQ
Sbjct: 127 RHGRKDADFLYWRWKPDKCDLPRFDSKAFLEIVRGKALAFIGDSVARNHMESLLCLLSQ 166

[Close]
BLAST of Cla017064 vs. TrEMBL
Match: A0A151S6T5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_027672 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.7e-39
Identity = 85/189 (44.97%), Postives = 124/189 (65.61%), Query Frame = 1 

Query: 1   MRFSNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFS----SLTPP 60
           M+ S++   +K +H  H +RERW   G  +  F+ I+ +++  F  FF ++    +LTP 
Sbjct: 1   MKTSSTMFQDKQYHHNHNKRERWLTIGKGV-PFVLISLLMASVFSLFFLYAPNPLTLTPH 60

Query: 61  N-------PFLVLRPKLLGLQSVHDPIASPPKEKHRCNLFKGNWVKDVK-RAAMYTNWSC 120
           +       P    + +     + + P + PP E+  C+L KG+WV D++  ++ YTN SC
Sbjct: 61  HGHDMFEKPSQKQQQQQEHATTTNVPSSKPPNEQKTCDLSKGHWVPDLEGSSSYYTNSSC 120

Query: 121 PTIPESKNCFKQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHM 178
            TIPESKNCFK GR+D DF+ W+WKP++CELPRFD   FLH++RGKK+AFIGDSVARNH 
Sbjct: 121 TTIPESKNCFKHGREDSDFLKWKWKPEQCELPRFDPKTFLHMVRGKKMAFIGDSVARNHF 180

[Close]
BLAST of Cla017064 vs. TrEMBL
Match: D7TWT7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01710 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.0e-39
Identity = 85/153 (55.56%), Postives = 97/153 (63.40%), Query Frame = 1 

Query: 26  FGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLRPKLLGLQSVHD-PIASPPKEKH 85
           F PLL+    +T I S F  F         P P     PK L     H  P+  P +   
Sbjct: 22  FTPLLFGCTSVTFIFSIFILF--------SPLPLAPTIPKQLHQDDDHTTPLIKPHQSDE 81

Query: 86  RCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFKQGRKDMDFVNWRWKPDECELPRFDS 145
           RC+LFKG+WV D K  + YTNWSC TIP+SKNCFK GRKD DFVNWRWKP  C LPRFD 
Sbjct: 82  RCDLFKGHWVPDEK-GSPYTNWSCTTIPDSKNCFKHGRKDTDFVNWRWKPQGCHLPRFDP 141

Query: 146 MAFLHLLRGKKLAFIGDSVARNHMESLLCILSQ 178
             F  L +GKKLAF+GDSV+RNHMESLLC+LSQ
Sbjct: 142 ATFFRLFQGKKLAFVGDSVSRNHMESLLCLLSQ 165

[Close]
BLAST of Cla017064 vs. TrEMBL
Match: A0A067FJJ8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0146121mg PE=4 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-38
Identity = 84/151 (55.63%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 27  GPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLRPKLLGLQSVHDPIASPPKEKHRC 86
           G  L+  L +T + SFF  F         PN       K+L   SVH        +   C
Sbjct: 26  GSFLFYSLALTTVFSFFLLF--------SPNSV-----KILPKSSVHYDQGREKIDVEEC 85

Query: 87  NLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFKQGRKDMDFVNWRWKPDECELPRFDSMA 146
           +LFKG WV D  R + YTNWSCPTIP SKNCF+ GRKD DF+NWRWKP  C+LPRFD+  
Sbjct: 86  DLFKGRWVPDF-RGSQYTNWSCPTIPVSKNCFRHGRKDTDFLNWRWKPHNCDLPRFDAKQ 145

Query: 147 FLHLLRGKKLAFIGDSVARNHMESLLCILSQ 178
           FL  +RGKKLAFIGDSVARNHMESLLC+LSQ
Sbjct: 146 FLAFVRGKKLAFIGDSVARNHMESLLCLLSQ 162

[Close]
BLAST of Cla017064 vs. NCBI nr
Match: gi|659085552|ref|XP_008443481.1| (PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Cucumis melo])

HSP 1 Score: 340.5 bits (872), Expect = 1.8e-90
Identity = 160/180 (88.89%), Postives = 167/180 (92.78%), Query Frame = 1 

Query: 1   MRFSNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFL 60
           M+FS+SHL EKSHH+RH QRE+W WF PLLWSFLG+TAIVSFFFFFFF  SSL+PPNPFL
Sbjct: 1   MKFSSSHLGEKSHHNRHSQREKWGWFSPLLWSFLGMTAIVSFFFFFFF--SSLSPPNPFL 60

Query: 61  VLRPKLLGLQSVHD--PIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCF 120
           VLRPKLLGLQSVHD  PIASPPKEK RCNLFKGNWVKDVK AA YTNWSCPTIPESKNCF
Sbjct: 61  VLRPKLLGLQSVHDHDPIASPPKEKQRCNLFKGNWVKDVKGAATYTNWSCPTIPESKNCF 120

Query: 121 KQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQI 179
           KQGRKD DFVNWRWKPDECELPRFD MAFLHLLRGKKLAFIGDSVARNHMESLLCILSQ+
Sbjct: 121 KQGRKDSDFVNWRWKPDECELPRFDPMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQV 178

[Close]
BLAST of Cla017064 vs. NCBI nr
Match: gi|449459418|ref|XP_004147443.1| (PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Cucumis sativus])

HSP 1 Score: 325.9 bits (834), Expect = 4.6e-86
Identity = 155/179 (86.59%), Postives = 162/179 (90.50%), Query Frame = 1 

Query: 1   MRFSNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFL 60
           M+FS+SHL EKSHH+R  QRE+W WF PLLWSFLG+TAIVSFFFF F   SSL+PPNPFL
Sbjct: 1   MKFSSSHLGEKSHHNRLSQREKWGWFTPLLWSFLGMTAIVSFFFFSF---SSLSPPNPFL 60

Query: 61  VLRPKLLGLQSV-HDPIASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCFK 120
           VLRPKLLGLQSV HDPIASPPKEK RCNLFKGNWVKDVK A  YTNWSCPTIPESKNCFK
Sbjct: 61  VLRPKLLGLQSVVHDPIASPPKEKQRCNLFKGNWVKDVKGAVTYTNWSCPTIPESKNCFK 120

Query: 121 QGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQI 179
           QGRKD  FVNWRWKPDECELPRFD MAFLHLLRGKKLAFIGDSVARNHMESLLCILSQ+
Sbjct: 121 QGRKDAGFVNWRWKPDECELPRFDPMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQV 176

[Close]
BLAST of Cla017064 vs. NCBI nr
Match: gi|255552672|ref|XP_002517379.1| (PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Ricinus communis])

HSP 1 Score: 172.6 bits (436), Expect = 6.4e-40
Identity = 93/179 (51.96%), Postives = 115/179 (64.25%), Query Frame = 1 

Query: 4   SNSHLAEKSHHDRHLQRERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLR 63
           S+S L+  +  D+ +  ER A   P L SFL +T I S F  +         PNPF  + 
Sbjct: 7   SSSSLSPYNKKDKCIDMERVA---PFLLSFLFLTTIFSLFLLY--------SPNPFKPII 66

Query: 64  PKLLGLQSVHDP-----IASPPKEKHRCNLFKGNWVKDVKRAAMYTNWSCPTIPESKNCF 123
           PK       HD      + +  KE+  C+LFKG W+ D+K  + YTN SC TIP SKNCF
Sbjct: 67  PK-------HDRDQKLLLINSQKEEENCDLFKGQWIPDLK-GSQYTNSSCTTIPNSKNCF 126

Query: 124 KQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVARNHMESLLCILSQ 178
           + GRKD DF+ WRWKPD+C+LPRFDS AFL ++RGK LAFIGDSVARNHMESLLC+LSQ
Sbjct: 127 RHGRKDADFLYWRWKPDKCDLPRFDSKAFLEIVRGKALAFIGDSVARNHMESLLCLLSQ 166

[Close]
BLAST of Cla017064 vs. NCBI nr
Match: gi|657974874|ref|XP_008379274.1| (PREDICTED: protein ALTERED XYLOGLUCAN 4-like isoform X1 [Malus domestica])

HSP 1 Score: 172.2 bits (435), Expect = 8.4e-40
Identity = 94/192 (48.96%), Postives = 118/192 (61.46%), Query Frame = 1 

Query: 10  EKSHHDRHLQR---ERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLRPK- 69
           EKSH+  + +R      +   P L +FL    I S F  +         PNPFL+  PK 
Sbjct: 14  EKSHNYPNRERGHNNNMSRLAPFLVTFLATATIFSLFLLY--------SPNPFLI-SPKQ 73

Query: 70  -LLGLQSVHDP-------------------IASPPKEKHRCNLFKGNWVKDVKRAAMYTN 129
            L  L SV +                    +  PPK++  C+LFKG+W+ D+ R AMYTN
Sbjct: 74  GLNDLBSVQNQTSIHAAQKEXQAPDRTNIKLLPPPKKEEECDLFKGHWIPDL-RGAMYTN 133

Query: 130 WSCPTIPESKNCFKQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVAR 178
            SC TIPESKNCF+ GR+D DF+NWRWKPD+CELPRFD   FL ++RGKK+AFIGDSVAR
Sbjct: 134 SSCATIPESKNCFRNGRRDRDFLNWRWKPDKCELPRFDPKTFLEIVRGKKMAFIGDSVAR 193

[Close]
BLAST of Cla017064 vs. NCBI nr
Match: gi|694434669|ref|XP_009344545.1| (PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Pyrus x bretschneideri])

HSP 1 Score: 171.8 bits (434), Expect = 1.1e-39
Identity = 94/192 (48.96%), Postives = 117/192 (60.94%), Query Frame = 1 

Query: 10  EKSHHDRHLQR---ERWAWFGPLLWSFLGITAIVSFFFFFFFFFSSLTPPNPFLVLRPK- 69
           EKSH+  + +R      +   P L +FL    I S F  +         PNPFL+  PK 
Sbjct: 9   EKSHNYPNRERGHNNNMSRLAPFLVAFLATATIFSLFLLY--------SPNPFLI-SPKQ 68

Query: 70  -LLGLQSVHDP-------------------IASPPKEKHRCNLFKGNWVKDVKRAAMYTN 129
            L  L SV +                    +  PPK++  C+LFKG+W+ D  R AMYTN
Sbjct: 69  GLNDLNSVQNQTSIHAAQKEHQAPDRTNIKLLPPPKKEEECDLFKGHWIPD-SRGAMYTN 128

Query: 130 WSCPTIPESKNCFKQGRKDMDFVNWRWKPDECELPRFDSMAFLHLLRGKKLAFIGDSVAR 178
            SC TIPESKNCF+ GR+D DF+NWRWKPD+CELPRFD   FL ++RGKK+AFIGDSVAR
Sbjct: 129 SSCATIPESKNCFRNGRRDRDFLNWRWKPDKCELPRFDPKTFLEIVRGKKMAFIGDSVAR 188

The following BLAST results are available for this feature:
BLAST of Cla017064 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TBL22_ARATH9.6e-3648.07Protein ALTERED XYLOGLUCAN 4-like OS=Arabidopsis thaliana GN=AXY4L PE=2 SV=1[more]
TBL20_ARATH6.3e-2751.02Protein trichome birefringence-like 20 OS=Arabidopsis thaliana GN=TBL20 PE=2 SV=... [more]
TBL18_ARATH1.8e-2650.48Protein trichome birefringence-like 18 OS=Arabidopsis thaliana GN=TBL18 PE=2 SV=... [more]
TBL17_ARATH4.1e-2651.43Protein YLS7 OS=Arabidopsis thaliana GN=YLS7 PE=2 SV=1[more]
TBL23_ARATH9.0e-2644.06Protein trichome birefringence-like 23 OS=Arabidopsis thaliana GN=TBL23 PE=2 SV=... [more]
BLAST of Cla017064 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFF0_CUCSA3.2e-8686.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829240 PE=4 SV=1[more]
B9RUD4_RICCO4.5e-4051.96Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0851870 PE=4 SV=1[more]
A0A151S6T5_CAJCA1.7e-3944.97Uncharacterized protein OS=Cajanus cajan GN=KK1_027672 PE=4 SV=1[more]
D7TWT7_VITVI5.0e-3955.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0066g01710 PE=4 SV=... [more]
A0A067FJJ8_CITSI5.5e-3855.63Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0146121mg PE=4 ... [more]
BLAST of Cla017064 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085552|ref|XP_008443481.1|1.8e-9088.89PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Cucumis melo][more]
gi|449459418|ref|XP_004147443.1|4.6e-8686.59PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Cucumis sativus][more]
gi|255552672|ref|XP_002517379.1|6.4e-4051.96PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Ricinus communis][more]
gi|657974874|ref|XP_008379274.1|8.4e-4048.96PREDICTED: protein ALTERED XYLOGLUCAN 4-like isoform X1 [Malus domestica][more]
gi|694434669|ref|XP_009344545.1|1.1e-3948.96PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Pyrus x bretschneideri][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR025846PMR5_N_dom
IPR026057PC-Esterase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010411 xyloglucan metabolic process
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU39653watermelon EST collection version 2.0transcribed_cluster
WMU66769watermelon EST collection version 2.0transcribed_cluster
WMU69846watermelon EST collection version 2.0transcribed_cluster
WMU73052watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla017064Cla017064.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU39653WMU39653transcribed_cluster
WMU69846WMU69846transcribed_cluster
WMU66769WMU66769transcribed_cluster
WMU73052WMU73052transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025846PMR5 N-terminal domainPFAMPF14416PMR5Ncoord: 85..138
score: 6.5
IPR026057PC-EsterasePFAMPF13839PC-Esterasecoord: 139..177
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla017064Wild cucumber (PI 183967)cpiwmB005
Cla017064Wild cucumber (PI 183967)cpiwmB006
Cla017064Wild cucumber (PI 183967)cpiwmB198
Cla017064Melon (DHL92) v3.5.1mewmB007
Cla017064Melon (DHL92) v3.5.1mewmB144
Cla017064Melon (DHL92) v3.5.1mewmB262
Cla017064Melon (DHL92) v3.5.1mewmB346
Cla017064Cucumber (Chinese Long) v2cuwmB006
Cla017064Watermelon (Charleston Gray)wcgwmB018
Cla017064Watermelon (Charleston Gray)wcgwmB051
Cla017064Watermelon (Charleston Gray)wcgwmB321
Cla017064Cucumber (Chinese Long) v2cuwmB005
Cla017064Cucumber (Chinese Long) v2cuwmB198
Cla017064Cucurbita pepo (Zucchini)cpewmB597
Cla017064Cucurbita pepo (Zucchini)cpewmB639
Cla017064Bottle gourd (USVL1VR-Ls)lsiwmB180
Cla017064Bottle gourd (USVL1VR-Ls)lsiwmB240
Cla017064Bottle gourd (USVL1VR-Ls)lsiwmB390
Cla017064Cucumber (Gy14) v2cgybwmB006
Cla017064Cucumber (Gy14) v2cgybwmB008
Cla017064Cucumber (Gy14) v2cgybwmB187
Cla017064Melon (DHL92) v3.6.1medwmB005
Cla017064Melon (DHL92) v3.6.1medwmB141
Cla017064Melon (DHL92) v3.6.1medwmB253
Cla017064Melon (DHL92) v3.6.1medwmB344
Cla017064Silver-seed gourdcarwmB0431
Cla017064Silver-seed gourdcarwmB1016
Cla017064Cucumber (Chinese Long) v3cucwmB007
Cla017064Cucumber (Chinese Long) v3cucwmB008
Cla017064Cucumber (Chinese Long) v3cucwmB208
Cla017064Watermelon (97103) v2wmwmbB051
Cla017064Watermelon (97103) v2wmwmbB070
Cla017064Watermelon (97103) v2wmwmbB076
Cla017064Wax gourdwgowmB021
Cla017064Wax gourdwgowmB122
Cla017064Watermelon (97103) v1wmwmB009
Cla017064Watermelon (97103) v1wmwmB057
Cla017064Cucumber (Gy14) v1cgywmB124
Cla017064Cucumber (Gy14) v1cgywmB381
Cla017064Cucumber (Gy14) v1cgywmB609
Cla017064Cucurbita maxima (Rimu)cmawmB090
Cla017064Cucurbita maxima (Rimu)cmawmB228
Cla017064Cucurbita maxima (Rimu)cmawmB655
Cla017064Cucurbita moschata (Rifu)cmowmB078
Cla017064Cucurbita moschata (Rifu)cmowmB214
Cla017064Cucurbita moschata (Rifu)cmowmB650