Cla017058 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla017058
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	SAG101 (AHRD V1 ***- Q9LL47_ARATH)
Location	Chr10 : 20496100 .. 20496441 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGAGAAGCGGTTTCTTCTATACTTACTGTGGATTCTCTATTTTGGGAACATGTGGAAGAGGCTGTTCTGGCATGTAATGTGCTCAAAGAGGTGGATTGTAGTGAAGAAGAAAGGGAAGCAGAACTAACTAAGCTTAGAGAATTTGAGGATTATGTAGTGGAATCGATGAAGAACTATGCTGTATCTTCTGAGATTTTCTTGCCACAAAGCACTTTCATGAGATGGTGGAAAGAATATGATGAGATTGTGGGAGACGATCATGACTCAGTGCTCTCAAGGTTAATGAGGAATGAAGAGTATGAAGAATATGCTAATGGCAGGTTAGAGATCCCTTGA

mRNA sequence

ATGCAAAGAGAAGCGGTTTCTTCTATACTTACTGTGGATTCTCTATTTTGGGAACATGTGGAAGAGGCTGTTCTGGCATGTAATGTGCTCAAAGAGGTGGATTGTAGTGAAGAAGAAAGGGAAGCAGAACTAACTAAGCTTAGAGAATTTGAGGATTATGTAGTGGAATCGATGAAGAACTATGCTGTATCTTCTGAGATTTTCTTGCCACAAAGCACTTTCATGAGATGGTGGAAAGAATATGATGAGATTGTGGGAGACGATCATGACTCAGTGCTCTCAAGGTTAATGAGGAATGAAGAGTATGAAGAATATGCTAATGGCAGGTTAGAGATCCCTTGA

Coding sequence (CDS)

ATGCAAAGAGAAGCGGTTTCTTCTATACTTACTGTGGATTCTCTATTTTGGGAACATGTGGAAGAGGCTGTTCTGGCATGTAATGTGCTCAAAGAGGTGGATTGTAGTGAAGAAGAAAGGGAAGCAGAACTAACTAAGCTTAGAGAATTTGAGGATTATGTAGTGGAATCGATGAAGAACTATGCTGTATCTTCTGAGATTTTCTTGCCACAAAGCACTTTCATGAGATGGTGGAAAGAATATGATGAGATTGTGGGAGACGATCATGACTCAGTGCTCTCAAGGTTAATGAGGAATGAAGAGTATGAAGAATATGCTAATGGCAGGTTAGAGATCCCTTGA

Protein sequence

MQREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKNYAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRLEIP

Homology

[Close]

BLAST of Cla017058 vs. Swiss-Prot
Match: SG101_ARATH (Senescence-associated carboxylesterase 101 OS=Arabidopsis thaliana GN=SAG101 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.7e-15
Identity = 44/109 (40.37%), Postives = 61/109 (55.96%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKE-VDCSEEEREAELTKLREFEDYVVESMKN 61
           ++  +S +LT DS FW  VE++++  N L   V   ++ RE    KL EFE YV E +  
Sbjct: 430 KKRDLSDLLTFDSCFWAEVEDSLIVINQLNTTVGMRDDVREVLTRKLVEFEGYVWEIITK 489

Query: 62  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGR 110
             VS EIFL +S+FM+WWKEY +I G  + S L+  M   +YE Y   +
Sbjct: 490 REVSPEIFLEESSFMKWWKEYKKIKG-FNSSYLTEFMNTRKYESYGKSQ 537

[Close]

BLAST of Cla017058 vs. TrEMBL
Match: A0A0A0LCW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829180 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.8e-45
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 1


Query: 1   MQREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKN 60
           MQ EAVSSILTVDSLFW HVEEA LAC+V++E DCSEEEREAEL KL +FEDYVVE M+N
Sbjct: 471 MQGEAVSSILTVDSLFWVHVEEAHLACDVVREGDCSEEEREAELAKLTKFEDYVVELMRN 530

Query: 61  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRLEI 113
           YAVSSEIFL +STFM+WWKEYDEIVGDDHDSVLSRLMRN EYEEY N RL+I
Sbjct: 531 YAVSSEIFLRRSTFMKWWKEYDEIVGDDHDSVLSRLMRNGEYEEYGNVRLDI 582

[Close]

BLAST of Cla017058 vs. TrEMBL
Match: B9HN15_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08950g PE=4 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 1.5e-20
Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKNY 61
           ++++V+ ILT DS FW +VEEA+++C +LK+   S  E+++    L  FE YV++ + NY
Sbjct: 382 KKQSVAGILTEDSCFWMNVEEALISCKLLKDETSSTSEKQSAREFLNTFEQYVMDQLNNY 441

Query: 62  AVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGR 110
           AVS EIFL +S+F +WWK++ EI+   H+S L+  M+N  Y +Y  G+
Sbjct: 442 AVSPEIFLEKSSFTKWWKDFQEIIETSHNSPLTDFMKNRTYRQYERGQ 489

[Close]

BLAST of Cla017058 vs. TrEMBL
Match: A0A0D2PWZ3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G259500 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-20
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSE-EEREAELTKLREFEDYVVESMKN 61
           +++ V  ILT DS FW HVEEA L C  LK  D     ER     KL EFE YV+E +K 
Sbjct: 255 KKQNVDVILTDDSCFWAHVEEARLWCKSLKTADVGMISERVCLRQKLMEFEVYVMEQIKK 314

Query: 62  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRL 111
           YAVSSEIFL  S+FM+WWKEY+ ++   H+S L+  +RN ++++YA+G L
Sbjct: 315 YAVSSEIFLKGSSFMQWWKEYEMLIEPHHNSPLTDFIRNCKFQQYASGCL 364

[Close]

BLAST of Cla017058 vs. TrEMBL
Match: A0A0D2M398_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G259500 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-20
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSE-EEREAELTKLREFEDYVVESMKN 61
           +++ V  ILT DS FW HVEEA L C  LK  D     ER     KL EFE YV+E +K 
Sbjct: 475 KKQNVDVILTDDSCFWAHVEEARLWCKSLKTADVGMISERVCLRQKLMEFEVYVMEQIKK 534

Query: 62  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRL 111
           YAVSSEIFL  S+FM+WWKEY+ ++   H+S L+  +RN ++++YA+G L
Sbjct: 535 YAVSSEIFLKGSSFMQWWKEYEMLIEPHHNSPLTDFIRNCKFQQYASGCL 584

[Close]

BLAST of Cla017058 vs. TrEMBL
Match: A0A0D2QW47_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G259500 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-20
Identity = 55/110 (50.00%), Postives = 73/110 (66.36%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSE-EEREAELTKLREFEDYVVESMKN 61
           +++ V  ILT DS FW HVEEA L C  LK  D     ER     KL EFE YV+E +K 
Sbjct: 218 KKQNVDVILTDDSCFWAHVEEARLWCKSLKTADVGMISERVCLRQKLMEFEVYVMEQIKK 277

Query: 62  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRL 111
           YAVSSEIFL  S+FM+WWKEY+ ++   H+S L+  +RN ++++YA+G L
Sbjct: 278 YAVSSEIFLKGSSFMQWWKEYEMLIEPHHNSPLTDFIRNCKFQQYASGCL 327

[Close]

BLAST of Cla017058 vs. NCBI nr
Match: gi|659085538|ref|XP_008443472.1| (PREDICTED: senescence-associated carboxylesterase 101 [Cucumis melo])

HSP 1 Score: 197.2 bits (500), Expect = 1.5e-47
Identity = 94/113 (83.19%), Postives = 103/113 (91.15%), Query Frame = 1


Query: 1   MQREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKN 60
           MQ EAVSSILTVDSLFW HVEEA+LAC++++E DCSEEEREAEL KL EFEDYV+E M+N
Sbjct: 473 MQEEAVSSILTVDSLFWVHVEEAILACDLVREGDCSEEEREAELAKLTEFEDYVLELMRN 532

Query: 61  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRLEIP 114
           YAVSSEIFLP STFM+WW+EYDEIVGDDHDSVLS LMRNEEYEEY NGRL IP
Sbjct: 533 YAVSSEIFLPHSTFMKWWEEYDEIVGDDHDSVLSGLMRNEEYEEYGNGRLVIP 585

[Close]

BLAST of Cla017058 vs. NCBI nr
Match: gi|449459490|ref|XP_004147479.1| (PREDICTED: senescence-associated carboxylesterase 101 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 5.5e-45
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 1


Query: 1   MQREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKN 60
           MQ EAVSSILTVDSLFW HVEEA LAC+V++E DCSEEEREAEL KL +FEDYVVE M+N
Sbjct: 471 MQGEAVSSILTVDSLFWVHVEEAHLACDVVREGDCSEEEREAELAKLTKFEDYVVELMRN 530

Query: 61  YAVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGRLEI 113
           YAVSSEIFL +STFM+WWKEYDEIVGDDHDSVLSRLMRN EYEEY N RL+I
Sbjct: 531 YAVSSEIFLRRSTFMKWWKEYDEIVGDDHDSVLSRLMRNGEYEEYGNVRLDI 582

[Close]

BLAST of Cla017058 vs. NCBI nr
Match: gi|698581248|ref|XP_009777498.1| (PREDICTED: senescence-associated carboxylesterase 101-like isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-21
Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKNY 61
           QR   SS LTVDS FW +VEEAV++C VL++   S +++E+    L +FE YVV+ + N+
Sbjct: 480 QRSQASS-LTVDSCFWAYVEEAVISCEVLRDGPSSSQDQESARENLIKFEQYVVDMINNF 539

Query: 62  AVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYA 107
            VS EIFLPQS+FMRWWKEY  +VGD + S LS  M+ +++  YA
Sbjct: 540 LVSPEIFLPQSSFMRWWKEYCRVVGDSYTSTLSNFMK-DDFRRYA 582

[Close]

BLAST of Cla017058 vs. NCBI nr
Match: gi|698581251|ref|XP_009777499.1| (PREDICTED: senescence-associated carboxylesterase 101-like isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 110.5 bits (275), Expect = 1.9e-21
Identity = 54/105 (51.43%), Postives = 74/105 (70.48%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKNY 61
           QR   SS LTVDS FW +VEEAV++C VL++   S +++E+    L +FE YVV+ + N+
Sbjct: 479 QRSQASS-LTVDSCFWAYVEEAVISCEVLRDGPSSSQDQESARENLIKFEQYVVDMINNF 538

Query: 62  AVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYA 107
            VS EIFLPQS+FMRWWKEY  +VGD + S LS  M+ +++  YA
Sbjct: 539 LVSPEIFLPQSSFMRWWKEYCRVVGDSYTSTLSNFMK-DDFRRYA 581

[Close]

BLAST of Cla017058 vs. NCBI nr
Match: gi|566187067|ref|XP_002313919.2| (hypothetical protein POPTR_0009s08950g [Populus trichocarpa])

HSP 1 Score: 107.1 bits (266), Expect = 2.1e-20
Identity = 46/108 (42.59%), Postives = 74/108 (68.52%), Query Frame = 1


Query: 2   QREAVSSILTVDSLFWEHVEEAVLACNVLKEVDCSEEEREAELTKLREFEDYVVESMKNY 61
           ++++V+ ILT DS FW +VEEA+++C +LK+   S  E+++    L  FE YV++ + NY
Sbjct: 382 KKQSVAGILTEDSCFWMNVEEALISCKLLKDETSSTSEKQSAREFLNTFEQYVMDQLNNY 441

Query: 62  AVSSEIFLPQSTFMRWWKEYDEIVGDDHDSVLSRLMRNEEYEEYANGR 110
           AVS EIFL +S+F +WWK++ EI+   H+S L+  M+N  Y +Y  G+
Sbjct: 442 AVSPEIFLEKSSFTKWWKDFQEIIETSHNSPLTDFMKNRTYRQYERGQ 489

The following BLAST results are available for this feature:

BLAST of Cla017058 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SG101_ARATH	7.7e-15	40.37	Senescence-associated carboxylesterase 101 OS=Arabidopsis thaliana GN=SAG101 PE=...	[more]

BLAST of Cla017058 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCW6_CUCSA	3.8e-45	83.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829180 PE=4 SV=1	[more]
B9HN15_POPTR	1.5e-20	42.59	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s08950g PE=4 SV=2	[more]
A0A0D2PWZ3_GOSRA	5.5e-20	50.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G259500 PE=4 SV=1	[more]
A0A0D2M398_GOSRA	5.5e-20	50.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G259500 PE=4 SV=1	[more]
A0A0D2QW47_GOSRA	5.5e-20	50.00	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G259500 PE=4 SV=1	[more]

BLAST of Cla017058 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085538\|ref\|XP_008443472.1\|	1.5e-47	83.19	PREDICTED: senescence-associated carboxylesterase 101 [Cucumis melo]	[more]
gi\|449459490\|ref\|XP_004147479.1\|	5.5e-45	83.04	PREDICTED: senescence-associated carboxylesterase 101 [Cucumis sativus]	[more]
gi\|698581248\|ref\|XP_009777498.1\|	1.9e-21	51.43	PREDICTED: senescence-associated carboxylesterase 101-like isoform X1 [Nicotiana...	[more]
gi\|698581251\|ref\|XP_009777499.1\|	1.9e-21	51.43	PREDICTED: senescence-associated carboxylesterase 101-like isoform X2 [Nicotiana...	[more]
gi\|566187067\|ref\|XP_002313919.2\|	2.1e-20	42.59	hypothetical protein POPTR_0009s08950g [Populus trichocarpa]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006629	lipid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla017058	Cla017058.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla017058	Bottle gourd (USVL1VR-Ls)	lsiwmB180
Cla017058	Bottle gourd (USVL1VR-Ls)	lsiwmB240
Cla017058	Bottle gourd (USVL1VR-Ls)	lsiwmB390
Cla017058	Cucumber (Gy14) v2	cgybwmB006
Cla017058	Cucumber (Gy14) v2	cgybwmB008
Cla017058	Cucumber (Gy14) v2	cgybwmB187
Cla017058	Melon (DHL92) v3.6.1	medwmB005
Cla017058	Melon (DHL92) v3.6.1	medwmB141
Cla017058	Melon (DHL92) v3.6.1	medwmB253
Cla017058	Melon (DHL92) v3.6.1	medwmB344
Cla017058	Silver-seed gourd	carwmB0431
Cla017058	Cucumber (Chinese Long) v3	cucwmB007
Cla017058	Cucumber (Chinese Long) v3	cucwmB008
Cla017058	Cucumber (Chinese Long) v3	cucwmB208
Cla017058	Watermelon (97103) v2	wmwmbB051
Cla017058	Watermelon (97103) v2	wmwmbB070
Cla017058	Watermelon (97103) v2	wmwmbB076
Cla017058	Wax gourd	wgowmB021
Cla017058	Wax gourd	wgowmB122
Cla017058	Watermelon (97103) v1	wmwmB009
Cla017058	Watermelon (97103) v1	wmwmB057
Cla017058	Cucumber (Gy14) v1	cgywmB124
Cla017058	Cucumber (Gy14) v1	cgywmB381
Cla017058	Cucumber (Gy14) v1	cgywmB609
Cla017058	Cucurbita maxima (Rimu)	cmawmB228
Cla017058	Cucurbita maxima (Rimu)	cmawmB655
Cla017058	Cucurbita moschata (Rifu)	cmowmB214
Cla017058	Cucurbita moschata (Rifu)	cmowmB650
Cla017058	Wild cucumber (PI 183967)	cpiwmB005
Cla017058	Wild cucumber (PI 183967)	cpiwmB006
Cla017058	Wild cucumber (PI 183967)	cpiwmB198
Cla017058	Melon (DHL92) v3.5.1	mewmB007
Cla017058	Melon (DHL92) v3.5.1	mewmB144
Cla017058	Melon (DHL92) v3.5.1	mewmB262
Cla017058	Melon (DHL92) v3.5.1	mewmB346
Cla017058	Cucumber (Chinese Long) v2	cuwmB006
Cla017058	Watermelon (Charleston Gray)	wcgwmB018
Cla017058	Watermelon (Charleston Gray)	wcgwmB051
Cla017058	Watermelon (Charleston Gray)	wcgwmB321
Cla017058	Cucumber (Chinese Long) v2	cuwmB005
Cla017058	Cucumber (Chinese Long) v2	cuwmB198
Cla017058	Cucurbita pepo (Zucchini)	cpewmB597