Cla016923 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla016923
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Regulator of nonsense transcripts 1-like (AHRD V1 **-- Q5Z4Y8_ORYSJ)
Location	Chr11 : 26137532 .. 26138283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGCATCTTGCTGATATAAAGCATGCAATTCTCATAGGTGATGAGTGCCAATTGCCAGCCATGGTTGAGAGCAAAGTAAGAAAATTTCTTCCCTTTTCAATCATTTGTGATAGATACGTATTAGACACTAGTTGAATCAAATAATTGTTAGACACGTAGCGTAAAACATTTGTCATGTAAAATAAAATAAACATGTTTGAACTCTCACAAACACATTTTGAGAATGACATTTGCATATGGATAACATTATCATTTCATAGATGTAAAATTCCCTTTTTTCTTGTTAAGAGTATACCCTAAATTTCACTTTTCAAAAATTATTAAAGCCCTGTTTAATAATTATTTTGTTTGTCTTCTATATTTGAAAATGAAACTTAATAAACACTACTACTATCAAAGTAATTCTTTTGCTTTTTTACCTACCCATTTAAAACAATGTCAAAAACCAACCCAAAGTTTGAAAAACTAATAAACACTATTTTTCTTTGTTTCTATATTATAAATCATATACTAATTCTCTCTTCTTCTCATTGAAGGTTTCGGATGGTGCTGGGTTTGGAAGAAGCTTGTTTGAGAGGTTAAGTTCATTGGGGCATCCAAAACATCTTCTCAATGTGCAATACAGAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAGGCCTGATCTCAGATGGTCCTAATGTCAAAGCCAAAGCCTATGAGAAGACGTTTCTTCCCGGACCGATTTCATAA

mRNA sequence

ATGCCAATGCATCTTGCTGATATAAAGCATGCAATTCTCATAGGTGATGAGTGCCAATTGCCAGCCATGGTTGAGAGCAAAGTTTCGGATGGTGCTGGGTTTGGAAGAAGCTTGTTTGAGAGGTTAAGTTCATTGGGGCATCCAAAACATCTTCTCAATGTGCAATACAGAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAGGCCTGATCTCAGATGGTCCTAATGTCAAAGCCAAAGCCTATGAGAAGACGTTTCTTCCCGGACCGATTTCATAA

Coding sequence (CDS)

ATGCCAATGCATCTTGCTGATATAAAGCATGCAATTCTCATAGGTGATGAGTGCCAATTGCCAGCCATGGTTGAGAGCAAAGTTTCGGATGGTGCTGGGTTTGGAAGAAGCTTGTTTGAGAGGTTAAGTTCATTGGGGCATCCAAAACATCTTCTCAATGTGCAATACAGAATGCATCCATCCATAAGCCTTTTCCCAAACTCAAAATTCTACTCAGGCCTGATCTCAGATGGTCCTAATGTCAAAGCCAAAGCCTATGAGAAGACGTTTCTTCCCGGACCGATTTCATAA

Protein sequence

MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHPSISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPIS

Homology

[Close]

BLAST of Cla016923 vs. Swiss-Prot
Match: MAA3_ARATH (Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.5e-15
Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 1


Query: 9   KHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHPSISLFPNS 68
           K   L+GD  QLPA V S V+  +G+G S+FERL   G+P  +L  QYRMHP I  FP+ 
Sbjct: 509 KQVFLVGDPKQLPATVISTVAQDSGYGTSMFERLQKAGYPVKMLKTQYRMHPEIRSFPSK 568

Query: 69  KFYSGLISDGPNVKAK 85
           +FY G + DG +++A+
Sbjct: 569 QFYEGALEDGSDIEAQ 584

[Close]

BLAST of Cla016923 vs. Swiss-Prot
Match: RENT1_ARATH (Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 1.4e-12
Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 1


Query: 8   IKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHPSISLFPN 67
           +K  +L+GD CQL  ++  K +  AG  +SLFERL +LG     L VQYRMHP++S FP+
Sbjct: 674 VKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVTLGIKPIRLQVQYRMHPALSEFPS 733

Query: 68  SKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           + FY G + +G  +  +       P P+
Sbjct: 734 NSFYEGTLQNGVTIIERQTTGIDFPWPV 761

[Close]

BLAST of Cla016923 vs. Swiss-Prot
Match: NAM7_YEAST (ATP-dependent helicase NAM7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NAM7 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.8e-12
Identity = 40/88 (45.45%), Postives = 53/88 (60.23%), Query Frame = 1


Query: 9   KHAILIGDECQL-PAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHPSISLFPN 68
           K  IL+GD  QL P ++E K +D AG  +SLFERL SLGH    L VQYRM+P +S FP+
Sbjct: 591 KQVILVGDHQQLGPVILERKAAD-AGLKQSLFERLISLGHVPIRLEVQYRMNPYLSEFPS 650

Query: 69  SKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           + FY G + +G  ++ +    +  P PI
Sbjct: 651 NMFYEGSLQNGVTIEQRTVPNSKFPWPI 677

[Close]

BLAST of Cla016923 vs. Swiss-Prot
Match: SEN1_YEAST (Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN1 PE=1 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 1.5e-11
Identity = 35/73 (47.95%), Postives = 45/73 (61.64%), Query Frame = 1


Query: 9    KHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHPSISLFPNS 68
            K  I++GD  QLP  V S  +    + +SLF R+     P +LL+VQYRMHPSIS FP+S
Sbjct: 1609 KRCIMVGDPNQLPPTVLSGAASNFKYNQSLFVRMEKNSSP-YLLDVQYRMHPSISKFPSS 1668

Query: 69   KFYSGLISDGPNV 82
            +FY G + DGP +
Sbjct: 1669 EFYQGRLKDGPGM 1680

[Close]

BLAST of Cla016923 vs. Swiss-Prot
Match: RENT1_DROME (Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster GN=Upf1 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 3.3e-11
Identity = 35/70 (50.00%), Postives = 43/70 (61.43%), Query Frame = 1


Query: 9   KHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHPSISLFPNS 68
           K  IL+GD CQL  +V  K +  AG  +SLFERL  LG     L VQYRMHP +S FP++
Sbjct: 636 KQLILVGDHCQLGPVVMCKKAARAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSN 695

Query: 69  KFYSGLISDG 79
            FY G + +G
Sbjct: 696 FFYEGSLQNG 705

[Close]

BLAST of Cla016923 vs. TrEMBL
Match: A0A068V208_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041138001 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-31
Identity = 69/100 (69.00%), Postives = 80/100 (80.00%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+ L D++H IL+GDECQLPA V SKVSD AGFGRSLFERLS LGH K+LLN+QYRMHP
Sbjct: 588 IPLQLPDLRHTILVGDECQLPATVISKVSDEAGFGRSLFERLSFLGHSKYLLNMQYRMHP 647

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLP----GPIS 97
           SIS+FPNSKFY   I D PNV+ K+YEK +LP    GP S
Sbjct: 648 SISVFPNSKFYQNKILDAPNVRTKSYEKYYLPERMFGPYS 687

[Close]

BLAST of Cla016923 vs. TrEMBL
Match: A0A067ERU6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0000532mg PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-31
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+ L+ IKHA+L GDECQLPAMVESKVSD A FGRSLFERLS L H KHLL++QYRMHP
Sbjct: 371 IPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFERLSHLRHSKHLLSIQYRMHP 430

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNS FY   I D P V+ ++YEK FLPGP+
Sbjct: 431 SISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPM 465

[Close]

BLAST of Cla016923 vs. TrEMBL
Match: V4U3Y0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004118mg PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 3.5e-31
Identity = 67/95 (70.53%), Postives = 77/95 (81.05%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+ L+ IKHA+L GDECQLPAMVESKVSD A FGRSLFERLS L H KHLL++QYRMHP
Sbjct: 645 IPLQLSGIKHAVLFGDECQLPAMVESKVSDEACFGRSLFERLSHLRHSKHLLSIQYRMHP 704

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNS FY   I D P V+ ++YEK FLPGP+
Sbjct: 705 SISFFPNSYFYENKIHDSPTVEKRSYEKRFLPGPM 739

[Close]

BLAST of Cla016923 vs. TrEMBL
Match: A0A067D9K7_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0380173mg PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.5e-30
Identity = 66/95 (69.47%), Postives = 76/95 (80.00%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+ L  I+HAIL+GDECQLPAMVES VS  A FGRSLFERLS LGH KHLL++QYRMHP
Sbjct: 193 IPLQLPCIQHAILVGDECQLPAMVESSVSGEAYFGRSLFERLSYLGHSKHLLSMQYRMHP 252

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNS FY   I D P V+ ++YEK FLPGP+
Sbjct: 253 SISFFPNSYFYENKILDAPTVRKRSYEKQFLPGPM 287

[Close]

BLAST of Cla016923 vs. TrEMBL
Match: V4U3X6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006754mg PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 6.5e-30
Identity = 66/95 (69.47%), Postives = 76/95 (80.00%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+ L  I+HAIL+GDECQLPAMVES VS  A FGRSLFERLS LGH KHLL++QYRMHP
Sbjct: 603 IPLQLPCIQHAILVGDECQLPAMVESSVSGEAYFGRSLFERLSYLGHSKHLLSMQYRMHP 662

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNS FY   I D P V+ ++YEK FLPGP+
Sbjct: 663 SISFFPNSYFYENKILDAPTVRKRSYEKQFLPGPM 697

[Close]

BLAST of Cla016923 vs. NCBI nr
Match: gi|778730286|ref|XP_011659750.1| (PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-35
Identity = 75/95 (78.95%), Postives = 82/95 (86.32%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+    IKHAILIGDECQLPAMVESK++D AGFGRSLFERLSSLGH KHLLNVQ+RMHP
Sbjct: 540 IPLQFPSIKHAILIGDECQLPAMVESKIADEAGFGRSLFERLSSLGHQKHLLNVQHRMHP 599

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNSKFY+  I DGPNVK KAYEK FL GP+
Sbjct: 600 SISYFPNSKFYANKILDGPNVKTKAYEKKFLHGPM 634

[Close]

BLAST of Cla016923 vs. NCBI nr
Match: gi|659123169|ref|XP_008461528.1| (PREDICTED: uncharacterized protein LOC103500100 [Cucumis melo])

HSP 1 Score: 151.8 bits (382), Expect = 6.3e-34
Identity = 74/95 (77.89%), Postives = 79/95 (83.16%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+    IKHAILIGDECQLPAMVESKV+D A FGRSLFERLSS GH KHLLNVQYRMHP
Sbjct: 504 IPLQFPAIKHAILIGDECQLPAMVESKVADEAKFGRSLFERLSSFGHQKHLLNVQYRMHP 563

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNSKFYS  ISDGPNVK + Y K FL GP+
Sbjct: 564 SISCFPNSKFYSNQISDGPNVKTEGYVKKFLNGPM 598

[Close]

BLAST of Cla016923 vs. NCBI nr
Match: gi|297738290|emb|CBI27491.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-33
Identity = 73/95 (76.84%), Postives = 80/95 (84.21%), Query Frame = 1


Query: 1    MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
            +P+ L DI+HAILIGDECQLPAMV SKVS  AGFGRSLFERLSSLGH KHLLNVQYRMHP
Sbjct: 3991 IPLQLPDIRHAILIGDECQLPAMVSSKVSKEAGFGRSLFERLSSLGHFKHLLNVQYRMHP 4050

Query: 61   SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
            SIS FPNSKFY   I D PNVK+K+Y K +L GP+
Sbjct: 4051 SISFFPNSKFYFNQILDAPNVKSKSYTKHYLSGPM 4085

[Close]

BLAST of Cla016923 vs. NCBI nr
Match: gi|297738290|emb|CBI27491.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 129.0 bits (323), Expect = 4.4e-27
Identity = 63/95 (66.32%), Postives = 73/95 (76.84%), Query Frame = 1


Query: 1    MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
            +P+ L  IK AILIGD+ QLP+ V S + D AGFGRSL+ERLSSL H KH LN+QYRMHP
Sbjct: 1858 IPLQLPGIKLAILIGDKFQLPSRVTSNICDRAGFGRSLYERLSSLDHAKHFLNLQYRMHP 1917

Query: 61   SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
            SISLFP S FY+  I D PNVK KAYEK +LP P+
Sbjct: 1918 SISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPV 1952

HSP 2 Score: 57.8 bits (138), Expect = 1.2e-05
Identity = 26/38 (68.42%), Postives = 29/38 (76.32%), Query Frame = 1


Query: 58 MHPSISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
          MHPSISLFP S FY+  I D PNVK KAYEK +LP P+
Sbjct: 1  MHPSISLFPCSNFYANQILDAPNVKHKAYEKKYLPDPV 38

HSP 3 Score: 150.2 bits (378), Expect = 1.8e-33
Identity = 70/93 (75.27%), Postives = 80/93 (86.02%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+ LA I HA+LIGDECQLPAMVESK+SDGAGFGRSLFERL+ L H KHLLN+QYRMHP
Sbjct: 581 IPLQLAGINHAVLIGDECQLPAMVESKISDGAGFGRSLFERLTLLNHSKHLLNIQYRMHP 640

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPG 94
           SISLFPN +FY   I DG NVK+K+YEK +LPG
Sbjct: 641 SISLFPNLQFYRNQILDGANVKSKSYEKHYLPG 673

[Close]

BLAST of Cla016923 vs. NCBI nr
Match: gi|449443986|ref|XP_004139756.1| (PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 5.3e-33
Identity = 73/95 (76.84%), Postives = 79/95 (83.16%), Query Frame = 1


Query: 1   MPMHLADIKHAILIGDECQLPAMVESKVSDGAGFGRSLFERLSSLGHPKHLLNVQYRMHP 60
           +P+    IKHAILIGDECQLPAMVESKV+D A FGRSLFERLS LG+ KHLLNVQYRMHP
Sbjct: 406 IPLQFPAIKHAILIGDECQLPAMVESKVADEAKFGRSLFERLSLLGYQKHLLNVQYRMHP 465

Query: 61  SISLFPNSKFYSGLISDGPNVKAKAYEKTFLPGPI 96
           SIS FPNSKFYS  ISDGPNVK + Y K FL GP+
Sbjct: 466 SISCFPNSKFYSNQISDGPNVKTEGYVKKFLNGPM 500

The following BLAST results are available for this feature:

BLAST of Cla016923 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MAA3_ARATH	6.5e-15	47.37	Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2 SV=1	[more]
RENT1_ARATH	1.4e-12	39.77	Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana GN=UPF1 PE=1...	[more]
NAM7_YEAST	1.8e-12	45.45	ATP-dependent helicase NAM7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...	[more]
SEN1_YEAST	1.5e-11	47.95	Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN1 P...	[more]
RENT1_DROME	3.3e-11	50.00	Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster GN=Upf1 P...	[more]

BLAST of Cla016923 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A068V208_COFCA	3.5e-31	69.00	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00041138001 PE=4 SV=1	[more]
A0A067ERU6_CITSI	3.5e-31	70.53	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0000532mg PE=4 ...	[more]
V4U3Y0_9ROSI	3.5e-31	70.53	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004118mg PE=4 SV=1	[more]
A0A067D9K7_CITSI	6.5e-30	69.47	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0380173mg PE=4 ...	[more]
V4U3X6_9ROSI	6.5e-30	69.47	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006754mg PE=4 SV=1	[more]

BLAST of Cla016923 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778730286\|ref\|XP_011659750.1\|	1.5e-35	78.95	PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis sativus]	[more]
gi\|659123169\|ref\|XP_008461528.1\|	6.3e-34	77.89	PREDICTED: uncharacterized protein LOC103500100 [Cucumis melo]	[more]
gi\|297738290\|emb\|CBI27491.3\|	1.8e-33	76.84	unnamed protein product [Vitis vinifera]	[more]
gi\|297738290\|emb\|CBI27491.3\|	4.4e-27	66.32	unnamed protein product [Vitis vinifera]	[more]
gi\|449443986\|ref\|XP_004139756.1\|	5.3e-33	76.84	PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla016923	Cla016923.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..81 score: 3.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 5..81 score: 1.7
None	No IPR available	PANTHER	PTHR10887	DNA2/NAM7 HELICASE FAMILY	coord: 1..95 score: 2.8
None	No IPR available	PANTHER	PTHR10887:SF358	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN	coord: 1..95 score: 2.8
None	No IPR available	PFAM	PF13087	AAA_12	coord: 35..87 score: 8.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla016923	Cla97C11G207080	Watermelon (97103) v2	wmwmbB361

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla016923	Cucurbita pepo (Zucchini)	cpewmB455
Cla016923	Cucurbita pepo (Zucchini)	cpewmB466
Cla016923	Cucurbita pepo (Zucchini)	cpewmB468
Cla016923	Bottle gourd (USVL1VR-Ls)	lsiwmB114
Cla016923	Bottle gourd (USVL1VR-Ls)	lsiwmB109
Cla016923	Cucumber (Gy14) v2	cgybwmB410
Cla016923	Melon (DHL92) v3.6.1	medwmB077
Cla016923	Silver-seed gourd	carwmB0674
Cla016923	Cucumber (Chinese Long) v3	cucwmB463
Cla016923	Cucumber (Chinese Long) v3	cucwmB465
Cla016923	Watermelon (97103) v2	wmwmbB366
Cla016923	Wax gourd	wgowmB567
Cla016923	Cucumber (Gy14) v1	cgywmB508
Cla016923	Cucurbita maxima (Rimu)	cmawmB743
Cla016923	Cucurbita maxima (Rimu)	cmawmB744
Cla016923	Cucurbita moschata (Rifu)	cmowmB736
Cla016923	Cucurbita moschata (Rifu)	cmowmB739
Cla016923	Wild cucumber (PI 183967)	cpiwmB446
Cla016923	Melon (DHL92) v3.5.1	mewmB078
Cla016923	Watermelon (Charleston Gray)	wcgwmB107
Cla016923	Watermelon (Charleston Gray)	wcgwmB110
Cla016923	Cucumber (Chinese Long) v2	cuwmB433
Cla016923	Cucumber (Chinese Long) v2	cuwmB440