Cla016922 (gene) Watermelon (97103) v1

Overview
NameCla016922
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionDNA helicase (AHRD V1 *--- B5ID88_ACIB4)
LocationChr11 : 26135373 .. 26137478 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGAGGTTGATGCTGTGCTCAAAATTCTTCATTCTTTGTCCCAAGGTAGTAATCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTTTTCGGTTTCGTTGTTTTAGCTATTTTGTTGGAATTGGAAACATTTTATGTTCTAAGATGCAAGAACACTTTAGTTTTGCTAGCATGAATGTATCCGACATGTGTTCGAGACTTGTTGATGGAATAGACATGTTCAACACTAGTTTTTAAAACTTAAATCATAAATTCATTGACTTTGATTTTCTTTCTTGTTTAAATTGGTATTATATTTTTTGAAGAAGGTATGTTTTAATGCATTTGTCCTAGTTGTCGTGTCTATGTCCTAGATTAGATTTTAAAATAATTGTGTCGTTGTGTCCGTGACATGTCATATATCCATGTCTCGTATCTATATCTGTACTTCGTTGATGTTCTTGATCATCTCTCATTTGCTTATTTTTTTAATAAAATGTATTGTAGTATGTGTTGGTTCGAAAGAAAATATCAACATTGGTGTAGTGTCTCCTTATTCAGCACAAGTGGTTGCCATTCGATATAAAATTGGGAGGAAGTACAATTCTAATGGATTTAATGTCAAGGTGAGCTCAGTTGATGGTTTTCAAGGTGGAGAAGAAGATATCATTATCATTTCTACTGTTCGGTCAAATGGAGGATCGTTGATCGGGTTCTTGTCGAGTAATCAAAGAACAAACGTCGCCGTTACAAGAGCTAGGTAACAACTTCATATACTATCCTTTTTGTTCTTTTAGTTCAACATATATATAATTCAAATTTGGGTGAAGTTTGATGTTACTTTTTTTCAAGTAAAGAGCTTTTAGCTAAACAAATGAAAACTATTTTCAAAATTTAAGCCCCATTTGATAATAATATCATTTTTAAATTTATGTTTGTCCTCCCCATTTTCTGAGTGTAGTTTTCTCATAACTTGAAGAAATAGTCAAATTCTTCATCAAATTTTAGAAATAATTACAAGATTTTGAAAATTATATTTTTAGTTTTTAAATTTTAGTTTAAATTTTTAAAATATCAGTAAAATGTACAAAAACTTGTAGGTGGAAACATAGCGTTTTATAACTAGTTTATGTTTTAGTACGTCTCCTGACCTTGTTTTTCCAATAGTCTTTAAAAAAAATAATAACTAGCTTATTTTTCATAAAAAAATTCAATAATATTTTTCAATAGGGGGATCATTTCTAACCCTAATCTTGATAGGTTGTATTAATTTTAACCCTACACTAAGTTTGAGGTTAGGGTTAAAACTGATACAACCTCTCAAGTTTAAGTTTTAGGTAAACAATAATTTTTTTCAAATTCTTAAATGAGGGTTTTGAGTAGTAATATTTTTTTCAACACTAATTATGTTTGGCCTTAGAAATCATCTATTTGCTAGGGATTTCTTTGTTCAAAAGTTATGTACAGCCTCTATTTAATAATCATTTGGTTTTTGAAAATTATGCTTATAATCACGTAATTACTATAATTTTGAAAATATTTAGATTCATAGCCAAATCCAAGAAACAAAAACAAAGTTTTGTCAGAATCATTTGTTTTTTACTTTGGTTTTACTTTTGAAAAATTATAACAAAATATAAGTGGAAAGCAAATGTTTATATGGTTATCAAGTAAATTTCTAACTAATCTATTTAAATGGGAATAGACACTGTTTGTGGATATTGGGGAACTTCAAAACACTCTCAAAGAGTAACTCAGTTTGGGAAGAGTTGGTTATTGATGCCAAAAATCGTGGCTGCTTCTTCAAAGCTGATGCCAATGCCATATCCAATTTCGTCGAACGGTTCGTTCTGCTGCTGGAACACGAGCCAAATGTTGATATTGACGGAGGAGAATGCCGTGTTCGAACAATCGTAGCAATTGAAGACAAGAAAGAAGATGAAAAATCATGTAAAGGAAGAAGCTTGGAGATTATGGAGGGAAAGAATATAGTAGAAGAAGCTCAGGACTCCAAGGCTGTTACTAGTTATGTGAGGCATACAAATTGGTTCCAAGTTAAGATTGAGAAATTCATTGTTCATTGTGTCTCTCGATTAATGGGAAAGCTATTGGGAAGATAG

mRNA sequence

ATGGTAGAGGTTGATGCTGTGCTCAAAATTCTTCATTCTTTGTCCCAAGTATGTGTTGGTTCGAAAGAAAATATCAACATTGGTGTAGTGTCTCCTTATTCAGCACAAGTGGTTGCCATTCGATATAAAATTGGGAGGAAGTACAATTCTAATGGATTTAATGTCAAGGTGAGCTCAGTTGATGGTTTTCAAGGTGGAGAAGAAGATATCATTATCATTTCTACTGTTCGGTCAAATGGAGGATCGTTGATCGGGTTCTTGTCGAGTAATCAAAGAACAAACGTCGCCGTTACAAGAGCTAGACACTGTTTGTGGATATTGGGGAACTTCAAAACACTCTCAAAGAGTAACTCAGTTTGGGAAGAGTTGGTTATTGATGCCAAAAATCGTGGCTGCTTCTTCAAAGCTGATGCCAATGCCATATCCAATTTCGTCGAACGGTTCGTTCTGCTGCTGGAACACGAGCCAAATGTTGATATTGACGGAGGAGAATGCCGTGTTCGAACAATCGTAGCAATTGAAGACAAGAAAGAAGATGAAAAATCATGTAAAGGAAGAAGCTTGGAGATTATGGAGGGAAAGAATATAGTAGAAGAAGCTCAGGACTCCAAGGCTGTTACTAGTTATGTGAGGCATACAAATTGGTTCCAAGTTAAGATTGAGAAATTCATTGTTCATTGTGTCTCTCGATTAATGGGAAAGCTATTGGGAAGATAG

Coding sequence (CDS)

ATGGTAGAGGTTGATGCTGTGCTCAAAATTCTTCATTCTTTGTCCCAAGTATGTGTTGGTTCGAAAGAAAATATCAACATTGGTGTAGTGTCTCCTTATTCAGCACAAGTGGTTGCCATTCGATATAAAATTGGGAGGAAGTACAATTCTAATGGATTTAATGTCAAGGTGAGCTCAGTTGATGGTTTTCAAGGTGGAGAAGAAGATATCATTATCATTTCTACTGTTCGGTCAAATGGAGGATCGTTGATCGGGTTCTTGTCGAGTAATCAAAGAACAAACGTCGCCGTTACAAGAGCTAGACACTGTTTGTGGATATTGGGGAACTTCAAAACACTCTCAAAGAGTAACTCAGTTTGGGAAGAGTTGGTTATTGATGCCAAAAATCGTGGCTGCTTCTTCAAAGCTGATGCCAATGCCATATCCAATTTCGTCGAACGGTTCGTTCTGCTGCTGGAACACGAGCCAAATGTTGATATTGACGGAGGAGAATGCCGTGTTCGAACAATCGTAGCAATTGAAGACAAGAAAGAAGATGAAAAATCATGTAAAGGAAGAAGCTTGGAGATTATGGAGGGAAAGAATATAGTAGAAGAAGCTCAGGACTCCAAGGCTGTTACTAGTTATGTGAGGCATACAAATTGGTTCCAAGTTAAGATTGAGAAATTCATTGTTCATTGTGTCTCTCGATTAATGGGAAAGCTATTGGGAAGATAG

Protein sequence

MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNSNGFNVKVSSVDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWEELVIDAKNRGCFFKADANAISNFVERFVLLLEHEPNVDIDGGECRVRTIVAIEDKKEDEKSCKGRSLEIMEGKNIVEEAQDSKAVTSYVRHTNWFQVKIEKFIVHCVSRLMGKLLGR
Homology
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BLAST of Cla016922 vs. Swiss-Prot
Match: YGSA_SCHPO (Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A10.10c PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 59/142 (41.55%), Postives = 81/142 (57.04%), Query Frame = 1 

Query: 3    EVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNSNGF-NVKVSSVD 62
            E   +L +   L Q  +       IGVV+PY +QV  +R +  RKY S  F ++ + +VD
Sbjct: 1647 EASFILLLYERLIQCYLNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVD 1706

Query: 63   GFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWE 122
            GFQG E+DIII S VRS+    IGFL   +R NVA+TRA+  L+I+GN K L + + ++ 
Sbjct: 1707 GFQGQEKDIIIFSCVRSSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPLMQED-IFY 1766

Query: 123  ELVIDAKNRGCFFKADANAISN 144
             L+ DAK RG +    AN   N
Sbjct: 1767 SLIEDAKTRGVWRDLSANQFKN 1787

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BLAST of Cla016922 vs. Swiss-Prot
Match: MAA3_ARATH (Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.7e-17
Identity = 51/143 (35.66%), Postives = 83/143 (58.04%), Query Frame = 1 

Query: 3   EVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNSNGFNV-KVSSVD 62
           EV+ VL I H L  +    K +  + ++SPY+ QV   + +    + +    V  +++VD
Sbjct: 623 EVEFVLLIYHRLVTMYPELKSSSQLAIISPYNYQVKTFKDRFKEMFGTEAEKVVDINTVD 682

Query: 63  GFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWE 122
           GFQG E+D+ I S VR+N    IGFLS+++R NV +TRA+  + ++G+  TL KS+ +W+
Sbjct: 683 GFQGREKDVAIFSCVRANENGQIGFLSNSRRMNVGITRAKSSVLVVGSAATL-KSDPLWK 742

Query: 123 ELVIDAKNRGCFFKADANAISNF 145
            L+  A+ R   FK  +  ++NF
Sbjct: 743 NLIESAEQRNRLFKV-SKPLNNF 763

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BLAST of Cla016922 vs. Swiss-Prot
Match: SEN1_YEAST (Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN1 PE=1 SV=2)

HSP 1 Score: 87.4 bits (215), Expect = 2.3e-16
Identity = 48/122 (39.34%), Postives = 78/122 (63.93%), Query Frame = 1 

Query: 27   IGVVSPYSAQVVAIRYKIGRKYNSN-GFNVKVSSVDGFQGGEEDIIIISTVRSNGG-SLI 86
            IG++SPY  Q+  +R +  R +      ++  +++DGFQG E++II+IS VR++   S +
Sbjct: 1746 IGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGFQGQEKEIILISCVRADDTKSSV 1805

Query: 87   GFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWEELVIDAKNRGCFFKADANAISNF 146
            GFL   +R NVA+TRA+  +W+LG+ ++L+KS  +W +L+ DAK+R C     A A S F
Sbjct: 1806 GFLKDFRRMNVALTRAKTSIWVLGHQRSLAKS-KLWRDLIEDAKDRSCL----AYACSGF 1862

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BLAST of Cla016922 vs. Swiss-Prot
Match: SETX_HUMAN (Probable helicase senataxin OS=Homo sapiens GN=SETX PE=1 SV=4)

HSP 1 Score: 86.7 bits (213), Expect = 3.8e-16
Identity = 54/146 (36.99%), Postives = 82/146 (56.16%), Query Frame = 1 

Query: 26   NIGVVSPYSAQVVAIRYKIGRKYNSNGFNVKVSSVDGFQGGEEDIIIISTVRSNG--GSL 85
            NIG+++ Y AQ   I+  + ++++  G   +V +VD FQG ++D +I++ VR+N   GS 
Sbjct: 2341 NIGIITHYKAQKTMIQKDLDKEFDRKG-PAEVDTVDAFQGRQKDCVIVTCVRANSIQGS- 2400

Query: 86   IGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWEELVIDAKNRGCFFKA------- 145
            IGFL+S QR NV +TRA++ L+ILG+ +TL + N  W +L+ DA+ RG   K        
Sbjct: 2401 IGFLASLQRLNVTITRAKYSLFILGHLRTLME-NQHWNQLIQDAQKRGAIIKTCDKNYRH 2460

Query: 146  DANAISNFVERFVLLLEHEPNVDIDG 163
            DA  I          L H P +  +G
Sbjct: 2461 DAVKILKLKPVLQRSLTHPPTIAPEG 2483

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BLAST of Cla016922 vs. Swiss-Prot
Match: SETX_MOUSE (Probable helicase senataxin OS=Mus musculus GN=Setx PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 48/112 (42.86%), Postives = 73/112 (65.18%), Query Frame = 1 

Query: 26   NIGVVSPYSAQVVAIRYKIGRKYNSNGFNVKVSSVDGFQGGEEDIIIISTVRSNG--GSL 85
            NIG+++ Y AQ   I+  + ++++  G   +V +VD FQG ++D II++ VR++   GS 
Sbjct: 2317 NIGIITHYKAQKTMIQKDLEKEFDKKG-PAEVDTVDAFQGRQKDCIIVTCVRASAVQGS- 2376

Query: 86   IGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWEELVIDAKNRGCFFK 136
            IGFL+S QR NV +TRA++ L+ILG+ +TL + N  W EL+ DA+ RG   K
Sbjct: 2377 IGFLASLQRLNVTITRAKYSLFILGHLRTLME-NQHWYELIQDAQKRGAIIK 2425

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BLAST of Cla016922 vs. TrEMBL
Match: A0A0A0K9F2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291120 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.5e-47
Identity = 106/164 (64.63%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 14  LSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNS-NGFNVKVSSVDGFQGGEEDIII 73
           +S  CV S E I+IGVVSPYSAQV AI +K+GR YN  N F V+VSSVDGFQGGEEDIII
Sbjct: 4   ISTTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNKCNSFQVRVSSVDGFQGGEEDIII 63

Query: 74  ISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWEELVIDAKNRGC 133
           ISTVRSN  S IGFLSSNQRTNVA+TRAR+CLWILGNF TLSKS+SVWE+LV DAKNRGC
Sbjct: 64  ISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFNTLSKSDSVWEDLVFDAKNRGC 123

Query: 134 FFKAD-----ANAISNF---VERFV-------LLLEHEPNVDID 162
           FF A      AN +S+    +E  +       L+++HE   D+D
Sbjct: 124 FFNAKEDKDLANVMSSCKMDIEESIDDLQITNLMIKHENEPDMD 167

[Close]
BLAST of Cla016922 vs. TrEMBL
Match: A0A067DGU8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048652mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 8.9e-44
Identity = 96/138 (69.57%), Postives = 109/138 (78.99%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKY-NSNGFNVKVSS 60
           MVEV  V+KIL  L +  VGSK+ ++IGVVSPY+AQVVAIR KIG +Y N +GF VKV S
Sbjct: 720 MVEVSVVIKILQKLYKAWVGSKQMVSIGVVSPYTAQVVAIRKKIGSEYENKDGFTVKVKS 779

Query: 61  VDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSV 120
           VDGFQGGEEDIIIISTVR N G  IGF+S+ QR NVA+TRARHCLWILGN +TL  S S+
Sbjct: 780 VDGFQGGEEDIIIISTVRCNTGGSIGFISNPQRVNVALTRARHCLWILGNERTLISSESI 839

Query: 121 WEELVIDAKNRGCFFKAD 138
           W  LV DAK R CFFKAD
Sbjct: 840 WGTLVCDAKARQCFFKAD 857

[Close]
BLAST of Cla016922 vs. TrEMBL
Match: V4RIR1_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100041191mg PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-43
Identity = 93/138 (67.39%), Postives = 111/138 (80.43%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKY-NSNGFNVKVSS 60
           MVEV  V+KIL +L +  + SKE ++IG+VSPYSAQVVAI+ K+G KY NS GF VKV S
Sbjct: 699 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 758

Query: 61  VDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSV 120
           +DGFQGGEED+IIISTVRSN G  IGFLS+++R NVA+TRARHCLWILGN +TL++  SV
Sbjct: 759 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 818

Query: 121 WEELVIDAKNRGCFFKAD 138
           WE LV DA  R CFF AD
Sbjct: 819 WEALVHDANARQCFFNAD 836

[Close]
BLAST of Cla016922 vs. TrEMBL
Match: A0A067F2W4_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041971mg PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-43
Identity = 93/138 (67.39%), Postives = 111/138 (80.43%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKY-NSNGFNVKVSS 60
           MVEV  V+KIL +L +  + SKE ++IG+VSPYSAQVVAI+ K+G KY NS GF VKV S
Sbjct: 501 MVEVSVVMKILLNLYKAWIDSKEKLSIGIVSPYSAQVVAIQEKLGSKYVNSAGFAVKVMS 560

Query: 61  VDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSV 120
           +DGFQGGEED+IIISTVRSN G  IGFLS+++R NVA+TRARHCLWILGN +TL++  SV
Sbjct: 561 IDGFQGGEEDLIIISTVRSNNGGSIGFLSNSKRVNVALTRARHCLWILGNARTLTRKKSV 620

Query: 121 WEELVIDAKNRGCFFKAD 138
           WE LV DA  R CFF AD
Sbjct: 621 WEALVHDANARQCFFNAD 638

[Close]
BLAST of Cla016922 vs. TrEMBL
Match: A0A067F2V7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000038mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.4e-43
Identity = 91/138 (65.94%), Postives = 113/138 (81.88%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNSN-GFNVKVSS 60
           MVEV AV+KI+ +L +  + SKE ++IG+VSPY AQVVAI+ K+G KY  + GF VKV+S
Sbjct: 743 MVEVSAVMKIMLNLYKAWIHSKEKLSIGIVSPYRAQVVAIQEKLGSKYEKSVGFAVKVTS 802

Query: 61  VDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSV 120
           +DGFQGGEEDIIIISTVRSN G  IGF+S  +R NVA+TRARHCLWILGN +TL+++NSV
Sbjct: 803 IDGFQGGEEDIIIISTVRSNNGGSIGFISDPKRANVALTRARHCLWILGNERTLTRNNSV 862

Query: 121 WEELVIDAKNRGCFFKAD 138
           W+ LV+DAK R CFF AD
Sbjct: 863 WKALVLDAKARKCFFNAD 880

[Close]
BLAST of Cla016922 vs. NCBI nr
Match: gi|449443986|ref|XP_004139756.1| (PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 116/182 (63.74%), Postives = 134/182 (73.63%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSL-----SQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNS-NGFN 60
           MVEVD VL+I+H L     S  CV S E I+IGVVSPYSAQV AI +K+GR YN  N F 
Sbjct: 526 MVEVDVVLQIIHKLYNKGTSTTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNKCNSFQ 585

Query: 61  VKVSSVDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLS 120
           V+VSSVDGFQGGEEDIIIISTVRSN  S IGFLSSNQRTNVA+TRAR+CLWILGNF TLS
Sbjct: 586 VRVSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFNTLS 645

Query: 121 KSNSVWEELVIDAKNRGCFFKAD-----ANAISNF---VERFV-------LLLEHEPNVD 162
           KS+SVWE+LV DAKNRGCFF A      AN +S+    +E  +       L+++HE   D
Sbjct: 646 KSDSVWEDLVFDAKNRGCFFNAKEDKDLANVMSSCKMDIEESIDDLQITNLMIKHENEPD 705

[Close]
BLAST of Cla016922 vs. NCBI nr
Match: gi|659123169|ref|XP_008461528.1| (PREDICTED: uncharacterized protein LOC103500100 [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 2.6e-49
Identity = 116/188 (61.70%), Postives = 133/188 (70.74%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSL---SQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYN-SNGFNVK 60
           M EVD VL+I+H L   +  CV S E I+IGVVSPYSAQV AI +K+GR YN SN F V+
Sbjct: 624 MAEVDVVLQIIHKLYNKATTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNNSNSFKVR 683

Query: 61  VSSVDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKS 120
           VSSVDGFQGGEEDIIIISTVRSN  S IGFLSSNQRTNVA+TRAR+CLWILGNF TLS S
Sbjct: 684 VSSVDGFQGGEEDIIIISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFDTLSNS 743

Query: 121 NSVWEELVIDAKNRGCFFKAD-----ANAISNF---VERFV---------------LLLE 162
           +S+WE+LV DAKNRGCFF A      AN +S++   VE+ V                LL 
Sbjct: 744 DSIWEDLVFDAKNRGCFFNAKEDKDLANVMSSWKMDVEKIVDDLIVGKWVNDLQITSLLT 803

[Close]
BLAST of Cla016922 vs. NCBI nr
Match: gi|700189208|gb|KGN44441.1| (hypothetical protein Csa_7G291120 [Cucumis sativus])

HSP 1 Score: 195.7 bits (496), Expect = 9.4e-47
Identity = 106/164 (64.63%), Postives = 123/164 (75.00%), Query Frame = 1 

Query: 14  LSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNS-NGFNVKVSSVDGFQGGEEDIII 73
           +S  CV S E I+IGVVSPYSAQV AI +K+GR YN  N F V+VSSVDGFQGGEEDIII
Sbjct: 4   ISTTCVDSNEKISIGVVSPYSAQVAAIEHKLGRNYNKCNSFQVRVSSVDGFQGGEEDIII 63

Query: 74  ISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSVWEELVIDAKNRGC 133
           ISTVRSN  S IGFLSSNQRTNVA+TRAR+CLWILGNF TLSKS+SVWE+LV DAKNRGC
Sbjct: 64  ISTVRSNRSSSIGFLSSNQRTNVALTRARYCLWILGNFNTLSKSDSVWEDLVFDAKNRGC 123

Query: 134 FFKAD-----ANAISNF---VERFV-------LLLEHEPNVDID 162
           FF A      AN +S+    +E  +       L+++HE   D+D
Sbjct: 124 FFNAKEDKDLANVMSSCKMDIEESIDDLQITNLMIKHENEPDMD 167

[Close]
BLAST of Cla016922 vs. NCBI nr
Match: gi|565405422|ref|XP_006368091.1| (PREDICTED: probable helicase MAGATAMA 3, partial [Solanum tuberosum])

HSP 1 Score: 188.7 bits (478), Expect = 1.1e-44
Identity = 94/138 (68.12%), Postives = 116/138 (84.06%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKYNS-NGFNVKVSS 60
           M+EV  V+K++HSL +    SK+ ++IGV+SPY+AQV+AI+ K+GR+Y++ +GF VKV S
Sbjct: 142 MIEVALVMKMVHSLFKAWSSSKKKLSIGVISPYAAQVLAIKGKLGRRYDTLDGFEVKVKS 201

Query: 61  VDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSV 120
           VDGFQGGEEDIIIISTVRSN G  IGFLSS QRTNVA+TRARHCLWILGN +TL +SNSV
Sbjct: 202 VDGFQGGEEDIIIISTVRSNSGGSIGFLSSLQRTNVALTRARHCLWILGNERTLLESNSV 261

Query: 121 WEELVIDAKNRGCFFKAD 138
           W  LV+DAK+R CFF AD
Sbjct: 262 WHTLVLDAKDRQCFFHAD 279

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BLAST of Cla016922 vs. NCBI nr
Match: gi|697192152|ref|XP_009605154.1| (PREDICTED: uncharacterized protein LOC104099763 isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 186.0 bits (471), Expect = 7.4e-44
Identity = 92/137 (67.15%), Postives = 115/137 (83.94%), Query Frame = 1 

Query: 1   MVEVDAVLKILHSLSQVCVGSKENINIGVVSPYSAQVVAIRYKIGRKY-NSNGFNVKVSS 60
           MVEV  V+KI+H+L +V  GS++ ++IGV+SPYSAQ++AI+ K+G+ Y N  GF VKV S
Sbjct: 719 MVEVALVMKIVHNLFKVWSGSRKKLSIGVISPYSAQILAIQGKLGQNYDNLEGFEVKVKS 778

Query: 61  VDGFQGGEEDIIIISTVRSNGGSLIGFLSSNQRTNVAVTRARHCLWILGNFKTLSKSNSV 120
           +DGFQGGEEDI+I+STVRSN G  IGFLSS QRTNVA+TRARHCLWILGN +TL +SNSV
Sbjct: 779 IDGFQGGEEDIVILSTVRSNRGGSIGFLSSFQRTNVALTRARHCLWILGNEQTLLESNSV 838

Query: 121 WEELVIDAKNRGCFFKA 137
           W+ LV+DAK+R CFF A
Sbjct: 839 WQALVLDAKSRQCFFHA 855

The following BLAST results are available for this feature:
BLAST of Cla016922 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YGSA_SCHPO1.4e-1841.55Uncharacterized ATP-dependent helicase C29A10.10c OS=Schizosaccharomyces pombe (... [more]
MAA3_ARATH2.7e-1735.66Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana GN=MAA3 PE=2 SV=1[more]
SEN1_YEAST2.3e-1639.34Helicase SEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN1 P... [more]
SETX_HUMAN3.8e-1636.99Probable helicase senataxin OS=Homo sapiens GN=SETX PE=1 SV=4[more]
SETX_MOUSE1.1e-1542.86Probable helicase senataxin OS=Mus musculus GN=Setx PE=1 SV=1[more]
BLAST of Cla016922 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K9F2_CUCSA6.5e-4764.63Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291120 PE=4 SV=1[more]
A0A067DGU8_CITSI8.9e-4469.57Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048652mg PE=4 S... [more]
V4RIR1_9ROSI3.4e-4367.39Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100041191mg PE... [more]
A0A067F2W4_CITSI3.4e-4367.39Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041971mg PE=4 S... [more]
A0A067F2V7_CITSI4.4e-4365.94Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g000038mg PE=4 SV=1[more]
BLAST of Cla016922 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449443986|ref|XP_004139756.1|1.4e-5063.74PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus][more]
gi|659123169|ref|XP_008461528.1|2.6e-4961.70PREDICTED: uncharacterized protein LOC103500100 [Cucumis melo][more]
gi|700189208|gb|KGN44441.1|9.4e-4764.63hypothetical protein Csa_7G291120 [Cucumis sativus][more]
gi|565405422|ref|XP_006368091.1|1.1e-4468.12PREDICTED: probable helicase MAGATAMA 3, partial [Solanum tuberosum][more]
gi|697192152|ref|XP_009605154.1|7.4e-4467.15PREDICTED: uncharacterized protein LOC104099763 isoform X1 [Nicotiana tomentosif... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016922Cla016922.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..126
score: 2.34
NoneNo IPR availablePANTHERPTHR10887DNA2/NAM7 HELICASE FAMILYcoord: 1..137
score: 1.1
NoneNo IPR availablePANTHERPTHR10887:SF372SUBFAMILY NOT NAMEDcoord: 1..137
score: 1.1
NoneNo IPR availablePFAMPF13087AAA_12coord: 2..109
score: 2.4