Cla016421 (gene) Watermelon (97103) v1

Overview
NameCla016421
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionExpansin 2 (AHRD V1 ***- Q9LLB2_ZINEL); contains Interpro domain(s) IPR007117 Pollen allergen/expansin, C-terminal
LocationChr11 : 21136185 .. 21137129 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATCTCACCATTCTCTTCTCTTTCAATCTTCTTCCTTATTTTCCTTCCTGCAATCTCAGCCGATTACGGCCACGCCACCTTCTATGGCGGCGGAGACGCTTCCGGCACAATGGGTAATTAACAACTAATCAACCCATCTTCATTTCTTCACTTTCATCTTCATTTCTTCCATTTCCGTGCTAATGGAGATTTGGGTTCCTTTTTTTTTTTTTTTTTTTCTTTCTTTTTATCAGGTGGGGCTTGTGGGTATGGGAATTTGTACAGTCAAGGATATGGGACGAACACGGCGGCGCTAAGTACTGCTCTGTTCAACAATGGGCTGAGCTGTGGCTCTTGTTATGAAATCACTTGCAATAGTGATCCTAAATGGTGTCTTCCTGGAAAAATCATCGTCACTGCCACTAATTTCTGTCCACCAAACTTTGCTCTGTCCAACGACAATGGCGGCTGGTGCAACCCTCCTCTGCAGCACTTCGACTTGGCGGAGCCGGCTTTTCTCCAAATCGCTCAATACCGTGCTGGAATCGTCCCTGTTTCCTTCCAAAGGTCATAACCCATTCAAACTAAAACCCGAGTTGTTTGATGCTCTGTTTTTTACTCACGTCAAATTTTAACAATTGATTTCATGAATTACAGAGTACCATGTATGAAGAAGGGAGGAATCAGATTCACCATTAACGGACATTCATACTTCAACTTGGTTCTGATCACCAACGTGGGCGGCGCCGGCGACGTTCACTCAGTGTCGATCAAAGGTTCGAAAACAGGATGGCAAGCCATGTCCAGAAATTGGGGACAGAATTGGCAGAGCAACAATTACTTGAACGGACAGAGTCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACCAGCTACGACGCCGTTCCGGCCAACTGGCAATTTGGCCAGACGTTCGAGGGAAGCCAATTCTAA

mRNA sequence

ATGGCCATCTCACCATTCTCTTCTCTTTCAATCTTCTTCCTTATTTTCCTTCCTGCAATCTCAGCCGATTACGGCCACGCCACCTTCTATGGCGGCGGAGACGCTTCCGGCACAATGGGTGGGGCTTGTGGGTATGGGAATTTGTACAGTCAAGGATATGGGACGAACACGGCGGCGCTAAGTACTGCTCTGTTCAACAATGGGCTGAGCTGTGGCTCTTGTTATGAAATCACTTGCAATAGTGATCCTAAATGGTGTCTTCCTGGAAAAATCATCGTCACTGCCACTAATTTCTGTCCACCAAACTTTGCTCTGTCCAACGACAATGGCGGCTGGTGCAACCCTCCTCTGCAGCACTTCGACTTGGCGGAGCCGGCTTTTCTCCAAATCGCTCAATACCGTGCTGGAATCGTCCCTGTTTCCTTCCAAAGAGTACCATGTATGAAGAAGGGAGGAATCAGATTCACCATTAACGGACATTCATACTTCAACTTGGTTCTGATCACCAACGTGGGCGGCGCCGGCGACGTTCACTCAGTGTCGATCAAAGGTTCGAAAACAGGATGGCAAGCCATGTCCAGAAATTGGGGACAGAATTGGCAGAGCAACAATTACTTGAACGGACAGAGTCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACCAGCTACGACGCCGTTCCGGCCAACTGGCAATTTGGCCAGACGTTCGAGGGAAGCCAATTCTAA

Coding sequence (CDS)

ATGGCCATCTCACCATTCTCTTCTCTTTCAATCTTCTTCCTTATTTTCCTTCCTGCAATCTCAGCCGATTACGGCCACGCCACCTTCTATGGCGGCGGAGACGCTTCCGGCACAATGGGTGGGGCTTGTGGGTATGGGAATTTGTACAGTCAAGGATATGGGACGAACACGGCGGCGCTAAGTACTGCTCTGTTCAACAATGGGCTGAGCTGTGGCTCTTGTTATGAAATCACTTGCAATAGTGATCCTAAATGGTGTCTTCCTGGAAAAATCATCGTCACTGCCACTAATTTCTGTCCACCAAACTTTGCTCTGTCCAACGACAATGGCGGCTGGTGCAACCCTCCTCTGCAGCACTTCGACTTGGCGGAGCCGGCTTTTCTCCAAATCGCTCAATACCGTGCTGGAATCGTCCCTGTTTCCTTCCAAAGAGTACCATGTATGAAGAAGGGAGGAATCAGATTCACCATTAACGGACATTCATACTTCAACTTGGTTCTGATCACCAACGTGGGCGGCGCCGGCGACGTTCACTCAGTGTCGATCAAAGGTTCGAAAACAGGATGGCAAGCCATGTCCAGAAATTGGGGACAGAATTGGCAGAGCAACAATTACTTGAACGGACAGAGTCTCTCTTTCCAAGTCACCACCAGCGACGGCCGTACCGTCACCAGCTACGACGCCGTTCCGGCCAACTGGCAATTTGGCCAGACGTTCGAGGGAAGCCAATTCTAA

Protein sequence

MAISPFSSLSIFFLIFLPAISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGSQF
Homology
[Close]
BLAST of Cla016421 vs. Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 5.7e-116
Identity = 196/245 (80.00%), Postives = 211/245 (86.12%), Query Frame = 1 

Query: 6   FSSLSIFFLIFLPAISADYG-----HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 65
           +S +SI  ++FL     D G     HATFYGG DASGTMGGACGYGNLY QGYGTNTAAL
Sbjct: 9   YSIISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAAL 68

Query: 66  STALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHF 125
           STALFNNGL+CG+CYE+ CN DP+WCL   I VTATNFCPPN  LSNDNGGWCNPPLQHF
Sbjct: 69  STALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHF 128

Query: 126 DLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSV 185
           DLAEPAFLQIAQYRAGIVPVSF+RVPCMKKGGIRFTINGHSYFNLVLI+NVGGAGDVH+V
Sbjct: 129 DLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAV 188

Query: 186 SIKGSKT-GWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTF 245
           SIKGSKT  WQAMSRNWGQNWQSN+Y+N QSLSFQVTTSDGRT+ S D  P+NWQFGQT+
Sbjct: 189 SIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTY 248

[Close]
BLAST of Cla016421 vs. Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 1.3e-112
Identity = 182/219 (83.11%), Postives = 201/219 (91.78%), Query Frame = 1 

Query: 26  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEITCNSDPKW 85
           HATFYGGGDASGTMGGACGYGNLYSQGYGT+TAALSTALFNNGLSCGSC+EI C +D KW
Sbjct: 30  HATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKW 89

Query: 86  CLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRV 145
           CLPG I+VTATNFCPPN AL+N+NGGWCNPPL+HFDLA+P F +IAQYRAGIVPVS++RV
Sbjct: 90  CLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRV 149

Query: 146 PCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNY 205
           PC ++GGIRFTINGHSYFNLVLITNVGGAGDVHS +IKGS+T WQAMSRNWGQNWQSN+Y
Sbjct: 150 PCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSY 209

Query: 206 LNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGSQF 245
           LNGQ+LSF+VTTSDGRTV S++A PA W +GQTF G QF
Sbjct: 210 LNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAGGQF 248

[Close]
BLAST of Cla016421 vs. Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 399.4 bits (1025), Expect = 2.8e-110
Identity = 182/229 (79.48%), Postives = 198/229 (86.46%), Query Frame = 1 

Query: 21  SADYG-----HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCY 80
           +ADYG     HATFYGGGDASGTMGGACGYGNLYS GYGTNTAALST LFN+G +CGSCY
Sbjct: 23  AADYGSWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCY 82

Query: 81  EITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRA 140
           E+ C++D +WCLPG + VTATN CPPN+AL ND+GGWCNPP  HFD+AEPAFLQI  YRA
Sbjct: 83  ELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRA 142

Query: 141 GIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRN 200
           GIVPVS++RVPC+KKGGIRFTINGHSYFNLVL+TNV G GDV SVSIKGS TGWQ MSRN
Sbjct: 143 GIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRN 202

Query: 201 WGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGSQF 245
           WGQNWQSN+YL+GQSLSFQV  SDGRTVTS + VPA WQFGQTFEG QF
Sbjct: 203 WGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNNVVPAGWQFGQTFEGGQF 251

[Close]
BLAST of Cla016421 vs. Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 396.7 bits (1018), Expect = 1.8e-109
Identity = 180/221 (81.45%), Postives = 197/221 (89.14%), Query Frame = 1 

Query: 25  GHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEITCNSDPK 84
           GHATFYGG DASGTMGGACGYGNL+SQGYG  TAALSTALFN+G  CG+C+E+ C  DP+
Sbjct: 35  GHATFYGGADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPE 94

Query: 85  WCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQR 144
           WC+PG IIV+ATNFCPPNFAL+NDNGGWCNPPL+HFDLAEPAFLQIAQYRAGIVPV+F+R
Sbjct: 95  WCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQYRAGIVPVAFRR 154

Query: 145 VPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSKTG-WQAMSRNWGQNWQSN 204
           VPC K GGIRFTING+ YF+LVLITNVGGAGD+ +VS+KGSKT  WQ+MSRNWGQNWQSN
Sbjct: 155 VPCEKGGGIRFTINGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSN 214

Query: 205 NYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGSQF 245
            YL GQSLSFQVT SDGRTV SYD VP +WQFGQTFEG QF
Sbjct: 215 TYLRGQSLSFQVTDSDGRTVVSYDVVPHDWQFGQTFEGGQF 255

[Close]
BLAST of Cla016421 vs. Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 5.2e-109
Identity = 176/218 (80.73%), Postives = 196/218 (89.91%), Query Frame = 1 

Query: 26  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEITCNSDPKW 85
           HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCG+C+EI C +D KW
Sbjct: 31  HATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKW 90

Query: 86  CLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRV 145
           CLPG I+VTATNFCPPN AL N+ GGWCNPP QHFDL++P F +IAQYRAGIVPV+++RV
Sbjct: 91  CLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRV 150

Query: 146 PCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNY 205
           PC+++GGIRFTINGHSYFNLVLITNVGGAGDVHS  +KGS+TGWQAMSRNWGQNWQSN+Y
Sbjct: 151 PCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSY 210

Query: 206 LNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGSQ 244
           LNGQSLSF+VTTSDG+T+ S +   A W FGQTF G+Q
Sbjct: 211 LNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTGAQ 248

[Close]
BLAST of Cla016421 vs. TrEMBL
Match: A0A0B0PVZ6_GOSAR (Expansin-A8-like protein OS=Gossypium arboreum GN=F383_11744 PE=4 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 2.1e-125
Identity = 212/253 (83.79%), Postives = 229/253 (90.51%), Query Frame = 1 

Query: 1   MAISPFSSLSIFFLIF---LPAISADYG------HATFYGGGDASGTMGGACGYGNLYSQ 60
           M I+ FS+ S+   +    LP++  DYG      HATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MTITAFSATSLLLFLICICLPSVYGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGG 120
           GYGTNTAALSTALFN+GLSCGSCYE+ C++DPKWCLPG IIVTATNFCPPNFALSNDNGG
Sbjct: 61  GYGTNTAALSTALFNDGLSCGSCYEMKCDNDPKWCLPGSIIVTATNFCPPNFALSNDNGG 120

Query: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNV 180
           WCNPPLQHFD+AEPAFLQIAQYRAGIVP+SF+RVPCMKKGGIRFTINGHSYFNLVLITNV
Sbjct: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCMKKGGIRFTINGHSYFNLVLITNV 180

Query: 181 GGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPA 240
            GAGDVH+VSIKGSKTGWQ+MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRTVTSY+  PA
Sbjct: 181 AGAGDVHAVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSYNVAPA 240

Query: 241 NWQFGQTFEGSQF 245
           NWQFGQTFEG QF
Sbjct: 241 NWQFGQTFEGGQF 253

[Close]
BLAST of Cla016421 vs. TrEMBL
Match: B7U8J1_ZIZJJ (Expansin 2 (Fragment) OS=Ziziphus jujuba PE=2 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.0e-124
Identity = 209/250 (83.60%), Postives = 227/250 (90.80%), Query Frame = 1 

Query: 3   ISPFSSLSIFFLIFLPAISADYG--------HATFYGGGDASGTMGGACGYGNLYSQGYG 62
           IS +S++S+ F +    +   +G        HATFYGGGDASGTMGGACGYGNLYSQGYG
Sbjct: 10  ISAYSAISLLFCVLNLCLRGTFGDNGGWQGGHATFYGGGDASGTMGGACGYGNLYSQGYG 69

Query: 63  TNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCN 122
           TNTAALSTALFNNGLSCGSCYE+ C+SDPKWCLPG I+VTATNFCPPNFALSNDNGGWCN
Sbjct: 70  TNTAALSTALFNNGLSCGSCYEMRCDSDPKWCLPGSILVTATNFCPPNFALSNDNGGWCN 129

Query: 123 PPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGA 182
           PPLQHFDLAEPAFLQIAQY+AGIVP+SF+RVPC+KKGG+RFTINGHSYFNLVLITNVGGA
Sbjct: 130 PPLQHFDLAEPAFLQIAQYKAGIVPISFRRVPCVKKGGVRFTINGHSYFNLVLITNVGGA 189

Query: 183 GDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQ 242
           GDVHSVSIKGSKTGWQ MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRT+TSY+ VPANWQ
Sbjct: 190 GDVHSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTLTSYNVVPANWQ 249

Query: 243 FGQTFEGSQF 245
           FGQTF GSQF
Sbjct: 250 FGQTFAGSQF 259

[Close]
BLAST of Cla016421 vs. TrEMBL
Match: A0A0D2V0B8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G014400 PE=4 SV=1)

HSP 1 Score: 454.1 bits (1167), Expect = 1.0e-124
Identity = 210/253 (83.00%), Postives = 228/253 (90.12%), Query Frame = 1 

Query: 1   MAISPFSSLSIFFLIF---LPAISADYG------HATFYGGGDASGTMGGACGYGNLYSQ 60
           M I+ FS+ S+   +    LP++  DYG      HATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MTITAFSATSLLLFLICICLPSVYGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGG 120
           GYGTNT ALSTALFNNGLSCGSCYE+ C++DPKWCLPG IIVTATNFCPPNFALSNDNGG
Sbjct: 61  GYGTNTVALSTALFNNGLSCGSCYEMKCDNDPKWCLPGSIIVTATNFCPPNFALSNDNGG 120

Query: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNV 180
           WCNPPLQHFD+AEPAFLQIAQYRAGIVP+SF+RVPCMKKGGIRFTINGHSYFNLVLITNV
Sbjct: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCMKKGGIRFTINGHSYFNLVLITNV 180

Query: 181 GGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPA 240
            GAGDVH+VSIKGSKTGWQ+MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRTV+SY+  PA
Sbjct: 181 AGAGDVHAVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVSSYNVAPA 240

Query: 241 NWQFGQTFEGSQF 245
           NWQFGQTF+G QF
Sbjct: 241 NWQFGQTFQGGQF 253

[Close]
BLAST of Cla016421 vs. TrEMBL
Match: A0A0D2UW38_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G209100 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 2.3e-124
Identity = 211/253 (83.40%), Postives = 226/253 (89.33%), Query Frame = 1 

Query: 1   MAISPFSSLSIF---FLIFLPAISADYG------HATFYGGGDASGTMGGACGYGNLYSQ 60
           M I+P ++ S+    F  FL     DYG      HATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MVIAPLTATSLLLFVFSFFLQGTFGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGG 120
           GYGTNTAALSTALFNNGLSCGSCYE+ C++DPKWCLPG I +TATNFCPPN ALSNDNGG
Sbjct: 61  GYGTNTAALSTALFNNGLSCGSCYEMRCDNDPKWCLPGSITITATNFCPPNLALSNDNGG 120

Query: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNV 180
           WCNPPLQHFDLAEPAFLQIAQYRAGIVP+SF+RVPCMKKGGIRFTINGHSYFNLVLI+NV
Sbjct: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPISFRRVPCMKKGGIRFTINGHSYFNLVLISNV 180

Query: 181 GGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPA 240
           GGAGDVH+VSIKGSKTGWQ+MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRTVTSY+  PA
Sbjct: 181 GGAGDVHAVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSYNVAPA 240

Query: 241 NWQFGQTFEGSQF 245
           NWQFGQTFEG QF
Sbjct: 241 NWQFGQTFEGGQF 253

[Close]
BLAST of Cla016421 vs. TrEMBL
Match: A0A0B0Q216_GOSAR (Expansin-A8-like protein OS=Gossypium arboreum GN=F383_16409 PE=4 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 4.0e-124
Identity = 210/253 (83.00%), Postives = 227/253 (89.72%), Query Frame = 1 

Query: 1   MAISPFSSLSIF---FLIFLPAISADYG------HATFYGGGDASGTMGGACGYGNLYSQ 60
           MAI+P ++ S+    F  FL     DYG      HATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MAIAPLTATSLLLFVFSFFLQGTFGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGG 120
           GYGTNTAALSTALFNNGL+CGSCYE+ C++DP+WCLPG + VTATNFCPPN ALSNDNGG
Sbjct: 61  GYGTNTAALSTALFNNGLTCGSCYEMRCDNDPRWCLPGSVTVTATNFCPPNLALSNDNGG 120

Query: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNV 180
           WCNPPLQHFDLAEPAFLQIAQYRAGIVP+SF+RVPCMKKGGIRFTINGHSYFNLVLI+NV
Sbjct: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPISFRRVPCMKKGGIRFTINGHSYFNLVLISNV 180

Query: 181 GGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPA 240
           GGAGDVH+VSIKGSKTGWQ+MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRTVTSY+  PA
Sbjct: 181 GGAGDVHAVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSYNVAPA 240

Query: 241 NWQFGQTFEGSQF 245
           NWQFGQTFEG QF
Sbjct: 241 NWQFGQTFEGGQF 253

[Close]
BLAST of Cla016421 vs. NCBI nr
Match: gi|659113827|ref|XP_008456774.1| (PREDICTED: expansin-A8-like [Cucumis melo])

HSP 1 Score: 509.6 bits (1311), Expect = 3.0e-141
Identity = 239/244 (97.95%), Postives = 240/244 (98.36%), Query Frame = 1 

Query: 1   MAISPFSSLSIFFLIFLPAISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 60
           MA SP SSLSIFFLIFLP+ISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL
Sbjct: 1   MAPSPLSSLSIFFLIFLPSISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAAL 60

Query: 61  STALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHF 120
           STALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHF
Sbjct: 61  STALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHF 120

Query: 121 DLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSV 180
           DLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSV
Sbjct: 121 DLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSV 180

Query: 181 SIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFE 240
           SIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVP NWQFGQTFE
Sbjct: 181 SIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPGNWQFGQTFE 240

Query: 241 GSQF 245
           G QF
Sbjct: 241 GGQF 244

[Close]
BLAST of Cla016421 vs. NCBI nr
Match: gi|449441252|ref|XP_004138396.1| (PREDICTED: expansin-A8 isoform X2 [Cucumis sativus])

HSP 1 Score: 504.2 bits (1297), Expect = 1.3e-139
Identity = 235/241 (97.51%), Postives = 238/241 (98.76%), Query Frame = 1 

Query: 4   SPFSSLSIFFLIFLPAISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 63
           S  SSLS+FFLIFLP+ISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA
Sbjct: 5   SLLSSLSVFFLIFLPSISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 64

Query: 64  LFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLA 123
           LFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLA
Sbjct: 65  LFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLA 124

Query: 124 EPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVSIK 183
           EPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGD+HSVSIK
Sbjct: 125 EPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDIHSVSIK 184

Query: 184 GSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGSQ 243
           GSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEG Q
Sbjct: 185 GSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEGGQ 244

Query: 244 F 245
           F
Sbjct: 245 F 245

[Close]
BLAST of Cla016421 vs. NCBI nr
Match: gi|778709684|ref|XP_011656437.1| (PREDICTED: expansin-A8 isoform X1 [Cucumis sativus])

HSP 1 Score: 491.5 bits (1264), Expect = 8.5e-136
Identity = 231/243 (95.06%), Postives = 235/243 (96.71%), Query Frame = 1 

Query: 4   SPFSSLSIFFLIFLPAISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 63
           S  SSLS+FFLIFLP+ISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA
Sbjct: 5   SLLSSLSVFFLIFLPSISADYGHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTA 64

Query: 64  LFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLA 123
           LFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLA
Sbjct: 65  LFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGGWCNPPLQHFDLA 124

Query: 124 EPAFLQIAQYRAGIVPVSFQ--RVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDVHSVS 183
           EPAFLQIAQYRAGIVP+     RVPCMKKGGIRFTINGHSYFNLVLITNVGGAGD+HSVS
Sbjct: 125 EPAFLQIAQYRAGIVPLILMNYRVPCMKKGGIRFTINGHSYFNLVLITNVGGAGDIHSVS 184

Query: 184 IKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEG 243
           IKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEG
Sbjct: 185 IKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPANWQFGQTFEG 244

Query: 244 SQF 245
            QF
Sbjct: 245 GQF 247

[Close]
BLAST of Cla016421 vs. NCBI nr
Match: gi|728848143|gb|KHG27586.1| (Expansin-A8 -like protein [Gossypium arboreum])

HSP 1 Score: 456.4 bits (1173), Expect = 3.0e-125
Identity = 212/253 (83.79%), Postives = 229/253 (90.51%), Query Frame = 1 

Query: 1   MAISPFSSLSIFFLIF---LPAISADYG------HATFYGGGDASGTMGGACGYGNLYSQ 60
           M I+ FS+ S+   +    LP++  DYG      HATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MTITAFSATSLLLFLICICLPSVYGDYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGG 120
           GYGTNTAALSTALFN+GLSCGSCYE+ C++DPKWCLPG IIVTATNFCPPNFALSNDNGG
Sbjct: 61  GYGTNTAALSTALFNDGLSCGSCYEMKCDNDPKWCLPGSIIVTATNFCPPNFALSNDNGG 120

Query: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNV 180
           WCNPPLQHFD+AEPAFLQIAQYRAGIVP+SF+RVPCMKKGGIRFTINGHSYFNLVLITNV
Sbjct: 121 WCNPPLQHFDMAEPAFLQIAQYRAGIVPISFRRVPCMKKGGIRFTINGHSYFNLVLITNV 180

Query: 181 GGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPA 240
            GAGDVH+VSIKGSKTGWQ+MSRNWGQNWQSN+YLNGQSLSFQVTTSDGRTVTSY+  PA
Sbjct: 181 AGAGDVHAVSIKGSKTGWQSMSRNWGQNWQSNSYLNGQSLSFQVTTSDGRTVTSYNVAPA 240

Query: 241 NWQFGQTFEGSQF 245
           NWQFGQTFEG QF
Sbjct: 241 NWQFGQTFEGGQF 253

[Close]
BLAST of Cla016421 vs. NCBI nr
Match: gi|1021583545|ref|XP_016181153.1| (PREDICTED: expansin-A8 [Arachis ipaensis])

HSP 1 Score: 454.9 bits (1169), Expect = 8.8e-125
Identity = 214/253 (84.58%), Postives = 227/253 (89.72%), Query Frame = 1 

Query: 1   MAISPFSSLSIFFL---IFLPAISADYG------HATFYGGGDASGTMGGACGYGNLYSQ 60
           MAI   S++S+ F+   + L    ADYG      HATFYGGGDASGTMGGACGYGNLYSQ
Sbjct: 1   MAIIAASAISLLFIALNLCLRGTFADYGGGWQGGHATFYGGGDASGTMGGACGYGNLYSQ 60

Query: 61  GYGTNTAALSTALFNNGLSCGSCYEITCNSDPKWCLPGKIIVTATNFCPPNFALSNDNGG 120
           GYGTNTAALSTALFNNGLSCGSCYE+ CN DPKWCLPG I VTATNFCPPNFALSNDNGG
Sbjct: 61  GYGTNTAALSTALFNNGLSCGSCYEMRCNGDPKWCLPGAITVTATNFCPPNFALSNDNGG 120

Query: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFQRVPCMKKGGIRFTINGHSYFNLVLITNV 180
           WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSF+RVPC+KKGGIRFT+NGHSYFNLVLITNV
Sbjct: 121 WCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCVKKGGIRFTVNGHSYFNLVLITNV 180

Query: 181 GGAGDVHSVSIKGSKTGWQAMSRNWGQNWQSNNYLNGQSLSFQVTTSDGRTVTSYDAVPA 240
           GGAGD+HSVSIKGSKTGWQ MSRNWGQNWQSN+YLNGQSLSFQVT SDGRTVTSY+  P+
Sbjct: 181 GGAGDIHSVSIKGSKTGWQTMSRNWGQNWQSNSYLNGQSLSFQVTASDGRTVTSYNVAPS 240

Query: 241 NWQFGQTFEGSQF 245
           NWQFGQTFEGSQF
Sbjct: 241 NWQFGQTFEGSQF 253

The following BLAST results are available for this feature:
BLAST of Cla016421 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXPA8_ARATH5.7e-11680.00Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1[more]
EXP10_ARATH1.3e-11283.11Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1[more]
EXPA2_ORYSJ2.8e-11079.48Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2[more]
EXPA2_ARATH1.8e-10981.45Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2[more]
EXPA1_ARATH5.2e-10980.73Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1[more]
BLAST of Cla016421 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0B0PVZ6_GOSAR2.1e-12583.79Expansin-A8-like protein OS=Gossypium arboreum GN=F383_11744 PE=4 SV=1[more]
B7U8J1_ZIZJJ1.0e-12483.60Expansin 2 (Fragment) OS=Ziziphus jujuba PE=2 SV=1[more]
A0A0D2V0B8_GOSRA1.0e-12483.00Uncharacterized protein OS=Gossypium raimondii GN=B456_012G014400 PE=4 SV=1[more]
A0A0D2UW38_GOSRA2.3e-12483.40Uncharacterized protein OS=Gossypium raimondii GN=B456_011G209100 PE=4 SV=1[more]
A0A0B0Q216_GOSAR4.0e-12483.00Expansin-A8-like protein OS=Gossypium arboreum GN=F383_16409 PE=4 SV=1[more]
BLAST of Cla016421 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113827|ref|XP_008456774.1|3.0e-14197.95PREDICTED: expansin-A8-like [Cucumis melo][more]
gi|449441252|ref|XP_004138396.1|1.3e-13997.51PREDICTED: expansin-A8 isoform X2 [Cucumis sativus][more]
gi|778709684|ref|XP_011656437.1|8.5e-13695.06PREDICTED: expansin-A8 isoform X1 [Cucumis sativus][more]
gi|728848143|gb|KHG27586.1|3.0e-12583.79Expansin-A8 -like protein [Gossypium arboreum][more]
gi|1021583545|ref|XP_016181153.1|8.8e-12584.58PREDICTED: expansin-A8 [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002963Expansin
IPR007112Expansin/allergen_DPBB_dom
IPR007117Expansin_CBD
IPR007118Expan_Lol_pI
IPR009009RlpA-like_DPBB
Vocabulary: Biological Process
TermDefinition
GO:0009664plant-type cell wall organization
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009664 plant-type cell wall organization
cellular_component GO:0005618 cell wall
cellular_component GO:0005576 extracellular region
cellular_component GO:0016020 membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016421Cla016421.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002963ExpansinPRINTSPR01226EXPANSINcoord: 91..101
score: 1.8E-85coord: 163..184
score: 1.8E-85coord: 52..66
score: 1.8E-85coord: 79..90
score: 1.8E-85coord: 198..219
score: 1.8E-85coord: 127..140
score: 1.8E-85coord: 227..243
score: 1.8E-85coord: 110..127
score: 1.8E-85coord: 151..163
score: 1.8
IPR007112Expansin/pollen allergen, DPBB domainSMARTSM00837dpbb_1coord: 57..142
score: 2.5
IPR007112Expansin/pollen allergen, DPBB domainPROFILEPS50842EXPANSIN_EG45coord: 40..152
score: 30
IPR007117Expansin, cellulose-binding-like domainGENE3DG3DSA:2.60.40.760coord: 147..242
score: 6.8
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 153..230
score: 7.8
IPR007117Expansin, cellulose-binding-like domainPROFILEPS50843EXPANSIN_CBDcoord: 162..241
score: 22
IPR007117Expansin, cellulose-binding-like domainunknownSSF49590PHL pollen allergencoord: 149..241
score: 5.89
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 21..36
score: 3.3E-48coord: 189..203
score: 3.3E-48coord: 227..241
score: 3.3E-48coord: 135..151
score: 3.3E-48coord: 39..57
score: 3.3E-48coord: 61..79
score: 3.3
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 22..146
score: 1.4
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 57..141
score: 4.7
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 12..170
score: 1.01
NoneNo IPR availablePANTHERPTHR31867FAMILY NOT NAMEDcoord: 1..244
score: 1.3E
NoneNo IPR availablePANTHERPTHR31867:SF22EXPANSIN-A8coord: 1..244
score: 1.3E