Cla016333 (gene) Watermelon (97103) v1

Overview
NameCla016333
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown Protein (AHRD V1)
LocationChr9 : 9829332 .. 9829835 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATCAAATTTAAAAAGTGTGGAGGCAAAGAGAGATGAAAGTAGTGATCAACTTATTTTGAGTCTCAAAAGACTTGTTCCCGGAGGGCCAAATCATGCTTTTCCTCTCGAAACTCCTCACGATAATAAATTTACTTTGGATCTCAAGCACCTTGTTCTTGAAGGGCCAAATCAAGCGTACCCTCCTGGAGTTCCTCCTCACAATATTGTTACGAATTCAAAAGCAAGAAATGGTATTGGTGAGCTTACTTTAGGTCCTAAGAGACTTGTTTTAGGGGGGCCAAATCAAGCTTTCCCTTCCAAAACTCCTCACAATAGTAAATTTACTTTGGGTCTCAAGCACCTCGTTCCCGAAGGGCCAAATCAAGCATACCCTCCTGGAGTTCCTCCTCACAATATTAAACTTACTTTGGGTCTCAAGCACCTTGTTCCTGAAGGGCCAAATCAAGCATACCCTCCTGGAGTTCCTCCTCACAATATTGTTACCAAGTTAATACCTTAA

mRNA sequence

ATGCTATCAAATTTAAAAAGTGTGGAGGCAAAGAGAGATGAAAGTAGTGATCAACTTATTTTGAGTCTCAAAAGACTTGTTCCCGGAGGGCCAAATCATGCTTTTCCTCTCGAAACTCCTCACGATAATAAATTTACTTTGGATCTCAAGCACCTTGTTCTTGAAGGGCCAAATCAAGCGTACCCTCCTGGAGTTCCTCCTCACAATATTGTTACGAATTCAAAAGCAAGAAATGGTATTGGTGAGCTTACTTTAGGTCCTAAGAGACTTGTTTTAGGGGGGCCAAATCAAGCTTTCCCTTCCAAAACTCCTCACAATAGTAAATTTACTTTGGGTCTCAAGCACCTCGTTCCCGAAGGGCCAAATCAAGCATACCCTCCTGGAGTTCCTCCTCACAATATTAAACTTACTTTGGGTCTCAAGCACCTTGTTCCTGAAGGGCCAAATCAAGCATACCCTCCTGGAGTTCCTCCTCACAATATTGTTACCAAGTTAATACCTTAA

Coding sequence (CDS)

ATGCTATCAAATTTAAAAAGTGTGGAGGCAAAGAGAGATGAAAGTAGTGATCAACTTATTTTGAGTCTCAAAAGACTTGTTCCCGGAGGGCCAAATCATGCTTTTCCTCTCGAAACTCCTCACGATAATAAATTTACTTTGGATCTCAAGCACCTTGTTCTTGAAGGGCCAAATCAAGCGTACCCTCCTGGAGTTCCTCCTCACAATATTGTTACGAATTCAAAAGCAAGAAATGGTATTGGTGAGCTTACTTTAGGTCCTAAGAGACTTGTTTTAGGGGGGCCAAATCAAGCTTTCCCTTCCAAAACTCCTCACAATAGTAAATTTACTTTGGGTCTCAAGCACCTCGTTCCCGAAGGGCCAAATCAAGCATACCCTCCTGGAGTTCCTCCTCACAATATTAAACTTACTTTGGGTCTCAAGCACCTTGTTCCTGAAGGGCCAAATCAAGCATACCCTCCTGGAGTTCCTCCTCACAATATTGTTACCAAGTTAATACCTTAA

Protein sequence

MLSNLKSVEAKRDESSDQLILSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNIVTKLIP
Homology
[Close]
BLAST of Cla016333 vs. TrEMBL
Match: M4D9I0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-17
Identity = 59/149 (39.60%), Postives = 73/149 (48.99%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 118 VKRLVPSGPNNETSPPSPPHSIANFGVKRLVPSGPNNETSPPSPPHSIAD---------- 177

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G+K 
Sbjct: 178 --FGVKRLVPSGPNNETSPPSPPHSIANFGVKRLVPSGPNNETSPPSPPHSI-ANFGVKR 237

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 238 LVPSGPNNETSPPSPPHSIANFGVKRLVP 253

[Close]
BLAST of Cla016333 vs. TrEMBL
Match: M4D9I0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-17
Identity = 59/149 (39.60%), Postives = 73/149 (48.99%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 92  VKRLVPSGPNNETSPPSPPHSIANFGVKRLVPSGPNNETSPPSPPHSIAN---------- 151

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G+K 
Sbjct: 152 --FGVKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNETSPPSPPHSI-ANFGVKR 211

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 212 LVPSGPNNETSPPSPPHSIANFGVKRLVP 227


HSP 2 Score: 97.1 bits (240), Expect = 2.2e-17
Identity = 59/152 (38.82%), Postives = 76/152 (50.00%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGI 80
           + +KRLVP GPN+     +P      + +K LV  GPN    P  PPH I   +   +  
Sbjct: 25  IGVKRLVPSGPNNETSPPSPPHFIEDIGVKRLVPSGPNNETSPPSPPHFIEDETSPPSPP 84

Query: 81  GELT-LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 140
             +   G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G
Sbjct: 85  HSIANFGVKRLVPSGPNNETSPPSPPHSIANFGVKRLVPSGPNNETSPPSPPHSI-ANFG 144

Query: 141 LKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           +K LVP GPN    P  PPH+I    V +L+P
Sbjct: 145 VKRLVPSGPNNETSPPSPPHSIADFGVKRLVP 175


HSP 3 Score: 96.7 bits (239), Expect = 2.9e-17
Identity = 56/139 (40.29%), Postives = 68/139 (48.92%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 144 VKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNETSPPSPPHSIAN---------- 203

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G+K 
Sbjct: 204 --FGVKRLVPSGPNNETSPPSPPHSIANFGVKRLVPSGPNNETSPPSPPHSI-ANFGVKR 263

Query: 143 LVPEGPNQAYPPGVPPHNI 162
           LVP GPN    P  PPH+I
Sbjct: 264 LVPSGPNNETSPPSPPHSI 269


HSP 4 Score: 92.4 bits (228), Expect = 5.5e-16
Identity = 61/164 (37.20%), Postives = 75/164 (45.73%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNH-AFPLETPH------------DNKFTLDLKHLVLEGPNQAYPPGVPP 80
           + +KRLVP GPN+   P   PH             +     +K LV  GPN    P  PP
Sbjct: 51  IGVKRLVPSGPNNETSPPSPPHFIEDETSPPSPPHSIANFGVKRLVPSGPNNETSPPSPP 110

Query: 81  HNIVTNSKARNGIGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPP 140
           H+I               G KRLV  GPN      +P +S    G+K LVP GPN    P
Sbjct: 111 HSIAN------------FGVKRLVPSGPNNETSPPSPPHSIANFGVKRLVPSGPNNETSP 170

Query: 141 GVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
             PPH+I    G+K LVP GPN    P  PPH+I    V +L+P
Sbjct: 171 PSPPHSI-ADFGVKRLVPSGPNNETSPPSPPHSIANFGVKRLVP 201


HSP 5 Score: 80.5 bits (197), Expect = 2.2e-12
Identity = 57/152 (37.50%), Postives = 71/152 (46.71%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKAR---NG 82
           +KRLVP GPN+     +P      + +K LV  GPN    P  PPH I      R   +G
Sbjct: 1   MKRLVPSGPNNETSPPSPPHFIEDIGVKRLVPSGPNNETSPPSPPHFIEDIGVKRLVPSG 60

Query: 83  IGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 142
               T  P          + PS  P +S    G+K LVP GPN    P  PPH+I    G
Sbjct: 61  PNNETSPPSPPHFIEDETSPPS--PPHSIANFGVKRLVPSGPNNETSPPSPPHSI-ANFG 120

Query: 143 LKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           +K LVP GPN    P  PPH+I    V +L+P
Sbjct: 121 VKRLVPSGPNNETSPPSPPHSIANFGVKRLVP 149


HSP 6 Score: 93.6 bits (231), Expect = 2.5e-16
Identity = 62/150 (41.33%), Postives = 74/150 (49.33%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P        +K LV  GPN    P  PPH IV           
Sbjct: 178 VKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNEPSPPSPPHFIVD---------- 237

Query: 83  LTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLK 142
              G KRLV  GPN +  PS +PH S    G+K LVP GPN    P  PPH+I    G+K
Sbjct: 238 --FGVKRLVPSGPNNETSPSSSPH-SIADFGVKRLVPSGPNNETSPPSPPHSI-ADFGVK 297

Query: 143 HLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            LVP GPN    P   PH+I    V +L+P
Sbjct: 298 RLVPSGPNNETSPSSSPHSIADFGVKRLVP 313

[Close]
BLAST of Cla016333 vs. TrEMBL
Match: A0A0D3BC81_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.2e-16
Identity = 64/160 (40.00%), Postives = 77/160 (48.12%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIG 82
           +KRLVP GPN+   P  +PH       +K LV  GPN    P  PPH+I           
Sbjct: 230 VKRLVPSGPNNETSPSSSPHSIA-DFGVKRLVPSGPNNETSPPSPPHSIAD--------- 289

Query: 83  ELTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNI------ 142
               G KRLV  GPN +  PS +PH S    G+K LVP GPN    P  PPH+I      
Sbjct: 290 ---FGVKRLVPSGPNNETSPSSSPH-SIADFGVKRLVPSGPNNETSPPSPPHSIADFGVK 349

Query: 143 ---KLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
                 +G+K LVP GPN    P  PPH I    V +L+P
Sbjct: 350 RLVPKNIGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVP 375


HSP 2 Score: 91.3 bits (225), Expect = 1.2e-15
Identity = 61/152 (40.13%), Postives = 74/152 (48.68%), Query Frame = 1 

Query: 23  LKRLVPGGPNHA-FPLETPHDNKFTLD--LKHLVLEGPNQAYPPGVPPHNIVTNSKARNG 82
           +KRLVP GPN+   P   PH   F +D  +K LV  GPN    P   PH+I         
Sbjct: 204 VKRLVPSGPNNEPSPPSPPH---FIVDFGVKRLVPSGPNNETSPSSSPHSIAD------- 263

Query: 83  IGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 142
                 G KRLV  GPN      +P +S    G+K LVP GPN    P   PH+I    G
Sbjct: 264 -----FGVKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNETSPSSSPHSI-ADFG 323

Query: 143 LKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           +K LVP GPN    P  PPH+I    V +L+P
Sbjct: 324 VKRLVPSGPNNETSPPSPPHSIADFGVKRLVP 339


HSP 3 Score: 89.7 bits (221), Expect = 3.6e-15
Identity = 57/151 (37.75%), Postives = 70/151 (46.36%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGI 80
           + +KRLVP GPN+     +P        +K LV  GPN    P  PPH I          
Sbjct: 150 IGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPPSPPHFIAD-------- 209

Query: 81  GELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGL 140
                G KRLV  GPN      +P +     G+K LVP GPN    P   PH+I    G+
Sbjct: 210 ----FGVKRLVPSGPNNEPSPPSPPHFIVDFGVKRLVPSGPNNETSPSSSPHSI-ADFGV 269

Query: 141 KHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           K LVP GPN    P  PPH+I    V +L+P
Sbjct: 270 KRLVPSGPNNETSPPSPPHSIADFGVKRLVP 287


HSP 4 Score: 89.7 bits (221), Expect = 3.6e-15
Identity = 57/141 (40.43%), Postives = 72/141 (51.06%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIG 82
           +KRLVP GPN+   P  +PH       +K LV  GPN    P  PPH+I      R  + 
Sbjct: 282 VKRLVPSGPNNETSPSSSPHSIA-DFGVKRLVPSGPNNETSPPSPPHSIADFGVKR--LV 341

Query: 83  ELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPN-QAYPPGVPPHNIKLTLGL 142
              +G KRLV  GPN      +P +     G+K LVP G N + YPP  PPH+I    G+
Sbjct: 342 PKNIGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGSNNETYPPS-PPHSIA-NFGV 401

Query: 143 KHLVPEGPNQAYPPGVPPHNI 162
           K  VP GPN    P  PPH++
Sbjct: 402 KRFVPSGPNNETSPPSPPHSM 417


HSP 5 Score: 89.4 bits (220), Expect = 4.6e-15
Identity = 58/154 (37.66%), Postives = 71/154 (46.10%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNI----VTNSKA 80
           + +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I    +     
Sbjct: 74  IGMKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNSETSPPSPPHSIADFGILVPSG 133

Query: 81  RNGIGELT--------LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPG 140
            N    L         +G KRLV  GPN      +P +     G+K LVP GPN    P 
Sbjct: 134 PNNETSLPSPQHSIEDIGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPP 193

Query: 141 VPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNIV 163
            PPH I    G+K LVP GPN    P  PPH IV
Sbjct: 194 SPPHFI-ADFGVKRLVPSGPNNEPSPPSPPHFIV 226


HSP 6 Score: 89.4 bits (220), Expect = 4.6e-15
Identity = 56/146 (38.36%), Postives = 69/146 (47.26%), Query Frame = 1 

Query: 26  LVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGELTL 85
           LVP GPN+   L +P  +   + +K LV  GPN    P  PPH I               
Sbjct: 129 LVPSGPNNETSLPSPQHSIEDIGVKRLVPSGPNNETSPPSPPHFIAD------------F 188

Query: 86  GPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHLVP 145
           G KRLV  GPN      +P +     G+K LVP GPN    P  PPH I +  G+K LVP
Sbjct: 189 GVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNEPSPPSPPHFI-VDFGVKRLVP 248

Query: 146 EGPNQAYPPGVPPHNI----VTKLIP 168
            GPN    P   PH+I    V +L+P
Sbjct: 249 SGPNNETSPSSSPHSIADFGVKRLVP 261


HSP 7 Score: 80.1 bits (196), Expect = 2.8e-12
Identity = 57/163 (34.97%), Postives = 76/163 (46.63%), Query Frame = 1 

Query: 9   EAKRDESSDQLILSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPH 68
           +  R+ S D++    K+LVP  PN+     +P      + +K LV  GPN    P  PPH
Sbjct: 40  DVSRNVSYDEI----KKLVPNDPNNEMFPSSPPVPIANIGMKRLVPSGPNNETSPPSPPH 99

Query: 69  NIVTNSKARNGIGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPG 128
           +I               G KRLV  GPN      +P +S    G+  LVP GPN      
Sbjct: 100 SIAD------------FGVKRLVPSGPNSETSPPSPPHSIADFGI--LVPSGPNNETSLP 159

Query: 129 VPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            P H+I+  +G+K LVP GPN    P  PPH I    V +L+P
Sbjct: 160 SPQHSIE-DIGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVP 183


HSP 8 Score: 83.2 bits (204), Expect = 3.3e-13
Identity = 62/151 (41.06%), Postives = 72/151 (47.68%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIG 82
           + RLVP GPN+   P   PH    T  +K LV  GPN    P  PPH I           
Sbjct: 43  VNRLVPSGPNNETSPPSPPHFIDDTR-VKRLVPSGPNNETSPPSPPHFIAD--------- 102

Query: 83  ELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLK 142
               G KRLV  GPN      T  +S    G+K LVP GPN    P  PPH+I    GLK
Sbjct: 103 ---FGVKRLVPSGPNNETSPPTLPHSIGDFGVKRLVPSGPNNETSPPSPPHSI-ADFGLK 162

Query: 143 HLVPEGP-NQAYPPGVPPHNI----VTKLIP 168
            LVP GP N+  PP   PH+I    V +L+P
Sbjct: 163 RLVPSGPNNETSPPS--PHSIANFGVKRLVP 177

[Close]
BLAST of Cla016333 vs. TrEMBL
Match: A0A0D3BDL9_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.3e-12
Identity = 52/149 (34.90%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           + RLVP GPN+     +P  +     +  LV  GPN    P  PPH  + +++       
Sbjct: 17  VNRLVPSGPNNETSPPSPPHSIADFGVNRLVPSGPNNETSPPSPPH-FIDDTRV------ 76

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
                KRLV  GPN      +P +     G+K LVP GPN    P   PH+I    G+K 
Sbjct: 77  -----KRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPPTLPHSIG-DFGVKR 136

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    + +L+P
Sbjct: 137 LVPSGPNNETSPPSPPHSIADFGLKRLVP 152


HSP 2 Score: 75.1 bits (183), Expect = 9.1e-11
Identity = 56/161 (34.78%), Postives = 70/161 (43.48%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P        +K LV  GPN    P   PH+I          G+
Sbjct: 69  VKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPPTLPHSI----------GD 128

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVP------------ 142
              G KRLV  GPN      +P +S    GLK LVP GPN    P  P            
Sbjct: 129 F--GVKRLVPSGPNNETSPPSPPHSIADFGLKRLVPSGPNNETSPPSPHSIANFGVKRLV 188

Query: 143 PHNIKLTLGLKHLVPEGPNQAYPPGVPPHNIVT----KLIP 168
           P +  + L +K LVP G N    P  PP +IV     +L+P
Sbjct: 189 PSDSIVNLEIKRLVPNGSNNETSPFSPPDSIVNLGIKRLVP 217


HSP 3 Score: 75.1 bits (183), Expect = 9.1e-11
Identity = 52/130 (40.00%), Postives = 66/130 (50.77%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPN-QAYPPGVPPHNIVTNSKARNGIG 82
           +KRLVP GPN+     +P  +     LK LV  GPN +  PP   PH+I      R    
Sbjct: 121 VKRLVPSGPNNETSPPSPPHSIADFGLKRLVPSGPNNETSPPS--PHSIANFGVKRLVPS 180

Query: 83  E--LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 142
           +  + L  KRLV  G N      +P +S   LG+K LVP GPN    P  PP +I + LG
Sbjct: 181 DSIVNLEIKRLVPNGSNNETSPFSPPDSIVNLGIKRLVPSGPNNETSPLSPPDSI-VNLG 240

Query: 143 LKHLVPEGPN 150
           +K  VP GPN
Sbjct: 241 IKRSVPSGPN 247


HSP 4 Score: 72.4 bits (176), Expect = 5.9e-10
Identity = 52/143 (36.36%), Postives = 65/143 (45.45%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKAR---NG 82
           +KRLVP GPN+     T   +     +K LV  GPN    P  PPH+I      R   +G
Sbjct: 95  VKRLVPSGPNNETSPPTLPHSIGDFGVKRLVPSGPNNETSPPSPPHSIADFGLKRLVPSG 154

Query: 83  IGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 142
               T  P    +   N       P +S   L +K LVP G N    P  PP +I + LG
Sbjct: 155 PNNETSPPSPHSIA--NFGVKRLVPSDSIVNLEIKRLVPNGSNNETSPFSPPDSI-VNLG 214

Query: 143 LKHLVPEGPNQAYPPGVPPHNIV 163
           +K LVP GPN    P  PP +IV
Sbjct: 215 IKRLVPSGPNNETSPLSPPDSIV 234


HSP 5 Score: 68.9 bits (167), Expect = 6.5e-09
Identity = 52/151 (34.44%), Postives = 63/151 (41.72%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPH-------------DNKFTLDLKHLVLEGPNQAYPPGVPPHN 82
           LKRLVP GPN+     +PH             D+   L++K LV  G N    P  PP +
Sbjct: 147 LKRLVPSGPNNETSPPSPHSIANFGVKRLVPSDSIVNLEIKRLVPNGSNNETSPFSPPDS 206

Query: 83  IVTNSKARNGIGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGV 142
           IV             LG KRLV  GPN      +P +S   LG+K  VP GPN       
Sbjct: 207 IVN------------LGIKRLVPSGPNNETSPLSPPDSIVNLGIKRSVPSGPNNE----T 266

Query: 143 PPHNIKLTLGLKHLVPEGPNQAYPPGVPPHN 161
             H I +  G K  V  GPN       PP +
Sbjct: 267 SSHFI-VNFGAKRFVSSGPNNGTSSPSPPRS 280


HSP 6 Score: 63.5 bits (153), Expect = 2.7e-07
Identity = 42/109 (38.53%), Postives = 49/109 (44.95%), Query Frame = 1 

Query: 63  PGVPPHNIVTNSKARNGIGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPN 122
           P  PPH+I               G  RLV  GPN      +P +S    G+  LVP GPN
Sbjct: 5   PPSPPHSIAD------------FGVNRLVPSGPNNETSPPSPPHSIADFGVNRLVPSGPN 64

Query: 123 QAYPPGVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
               P  PPH I  T  +K LVP GPN    P  PPH I    V +L+P
Sbjct: 65  NETSPPSPPHFIDDT-RVKRLVPSGPNNETSPPSPPHFIADFGVKRLVP 100


HSP 7 Score: 74.3 bits (181), Expect = 1.5e-10
Identity = 46/114 (40.35%), Postives = 52/114 (45.61%), Query Frame = 1 

Query: 49  LKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGELTLGPKRLVLGGPN-QAFPSKTPHNS 108
           +K LV  GPN    P  PPH+I               G KRLV  GPN +  P   PH  
Sbjct: 1   MKRLVPSGPNNETSPPSPPHSIAD------------FGVKRLVPSGPNNETSPPSPPH-- 60

Query: 109 KFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI 162
            F      LVP GPN    P  PPH+I    G+K  VP GPN    P  PPH+I
Sbjct: 61  -FIADFGRLVPSGPNNETSPPSPPHSIA-NFGVKRFVPSGPNNETSPPSPPHSI 98

[Close]
BLAST of Cla016333 vs. TrEMBL
Match: A0A078GEA8_BRANA (BnaC03g41060D protein OS=Brassica napus GN=BnaC03g41060D PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 7.2e-08
Identity = 40/112 (35.71%), Postives = 49/112 (43.75%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH I            
Sbjct: 1   MKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNETSPPSPPHFIADFG-------- 60

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNI 135
                 RLV  GPN      +P +S    G+K  VP GPN    P  PPH+I
Sbjct: 61  ------RLVPSGPNNETSPPSPPHSIANFGVKRFVPSGPNNETSPPSPPHSI 98


HSP 2 Score: 52.0 bits (123), Expect = 8.2e-04
Identity = 27/57 (47.37%), Postives = 32/57 (56.14%), Query Frame = 1 

Query: 113 LKHLVPEGPNQAYPPGVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNIVT--KLIP 168
           +K LVP GPN    P  PPH+I    G+K LVP GPN    P  PPH I    +L+P
Sbjct: 1   MKRLVPSGPNNETSPPSPPHSIA-DFGVKRLVPSGPNNETSPPSPPHFIADFGRLVP 56


HSP 3 Score: 60.8 bits (146), Expect = 1.8e-06
Identity = 33/73 (45.21%), Postives = 40/73 (54.79%), Query Frame = 1 

Query: 85  LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHLV 144
           +G KRLV  GPN A    +P  S+  +G K LVP GP+ A  P  P  +I   +G K LV
Sbjct: 83  IGTKRLVPSGPNNATSPPSPSFSRANIGTKRLVPSGPSNATSPPSPSFSI-TDIGTKRLV 142

Query: 145 PEGPNQAYPPGVP 158
           P GPN A  P  P
Sbjct: 143 PSGPNNATSPPSP 154

[Close]
BLAST of Cla016333 vs. NCBI nr
Match: gi|923771819|ref|XP_013679797.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Brassica napus])

HSP 1 Score: 97.1 bits (240), Expect = 3.2e-17
Identity = 65/151 (43.05%), Postives = 74/151 (49.01%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIG 82
           +KRLVP GPN+  FP   PH       +K LV  GPN    P  PPH I           
Sbjct: 129 VKRLVPSGPNNETFPPSPPHSIA-DFGVKRLVPSGPNNETSPPSPPHPIAD--------- 188

Query: 83  ELTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGL 142
               G KRLV  GPN + FP   PH S    G+K LVP GPN    P  PPH I    G+
Sbjct: 189 ---FGVKRLVPSGPNNETFPPSPPH-SIADFGVKRLVPSGPNNETSPPSPPHPI-ADFGV 248

Query: 143 KHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           K LVP GPN    P  PPH+I    V +L+P
Sbjct: 249 KRLVPNGPNNETSPPSPPHSIENIGVKRLVP 264

[Close]
BLAST of Cla016333 vs. NCBI nr
Match: gi|923771819|ref|XP_013679797.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Brassica napus])

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-16
Identity = 65/164 (39.63%), Postives = 77/164 (46.95%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKAR---N 82
           +KRLVP GPN+  FP   PH       +K LV  GPN    P  PPH I      R   N
Sbjct: 181 VKRLVPSGPNNETFPPSPPHSIA-DFGVKRLVPSGPNNETSPPSPPHPIADFGVKRLVPN 240

Query: 83  GIGELT-----------LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPP 142
           G    T           +G KRLV  GPN      +P +S    G+K LVP GPN    P
Sbjct: 241 GPNNETSPPSPPHSIENIGVKRLVPSGPNNEMSPPSPQHSIADFGVKRLVPSGPNNETSP 300

Query: 143 GVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
             PPH+I    G+K LV  GPN    P  PPH+I    V +L+P
Sbjct: 301 PSPPHSI-ADFGVKGLVSSGPNNETSPPSPPHSIENIGVKRLVP 342


HSP 2 Score: 93.6 bits (231), Expect = 3.5e-16
Identity = 62/152 (40.79%), Postives = 73/152 (48.03%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGI 80
           + +KRLVP GPN+     +P        +K LV  GPN    P  PPH I          
Sbjct: 75  IGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPPSPPHFIAD-------- 134

Query: 81  GELTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 140
                G KRLV  GPN + FP   PH S    G+K LVP GPN    P  PPH I    G
Sbjct: 135 ----FGVKRLVPSGPNNETFPPSPPH-SIADFGVKRLVPSGPNNETSPPSPPHPI-ADFG 194

Query: 141 LKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           +K LVP GPN    P  PPH+I    V +L+P
Sbjct: 195 VKRLVPSGPNNETFPPSPPHSIADFGVKRLVP 212


HSP 3 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 57/149 (38.26%), Postives = 72/149 (48.32%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P        +K LV  GPN    P  PPH+I            
Sbjct: 155 VKRLVPSGPNNETSPPSPPHPIADFGVKRLVPSGPNNETFPPSPPHSIAD---------- 214

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +     G+K LVP GPN    P  PPH+I+  +G+K 
Sbjct: 215 --FGVKRLVPSGPNNETSPPSPPHPIADFGVKRLVPNGPNNETSPPSPPHSIE-NIGVKR 274

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  P H+I    V +L+P
Sbjct: 275 LVPSGPNNEMSPPSPQHSIADFGVKRLVP 290


HSP 4 Score: 90.1 bits (222), Expect = 3.9e-15
Identity = 58/149 (38.93%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P        +K LV  GPN    P  PPH+I            
Sbjct: 103 VKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETFPPSPPHSIAD---------- 162

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +     G+K LVP GPN    P  PPH+I    G+K 
Sbjct: 163 --FGVKRLVPSGPNNETSPPSPPHPIADFGVKRLVPSGPNNETFPPSPPHSI-ADFGVKR 222

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH I    V +L+P
Sbjct: 223 LVPSGPNNETSPPSPPHPIADFGVKRLVP 238


HSP 5 Score: 89.4 bits (220), Expect = 6.7e-15
Identity = 57/146 (39.04%), Postives = 69/146 (47.26%), Query Frame = 1 

Query: 26  LVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGELTL 85
           LVP GPN+   L +P  +   + +K LV  GPN    P  PPH I               
Sbjct: 54  LVPIGPNYETSLPSPQHSIEDIGVKRLVPSGPNNETSPPSPPHFIAD------------F 113

Query: 86  GPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHLVP 145
           G KRLV  GPN      +P +     G+K LVP GPN    P  PPH+I    G+K LVP
Sbjct: 114 GVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETFPPSPPHSI-ADFGVKRLVP 173

Query: 146 EGPNQAYPPGVPPHNI----VTKLIP 168
            GPN    P  PPH I    V +L+P
Sbjct: 174 SGPNNETSPPSPPHPIADFGVKRLVP 186


HSP 6 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 59/163 (36.20%), Postives = 77/163 (47.24%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIV----------- 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 1   MKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNETSPPSPPHSIADFGILVPIGPN 60

Query: 83  ---TNSKARNGIGELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPG 142
              +    ++ I ++  G KRLV  GPN      +P +     G+K LVP GPN    P 
Sbjct: 61  YETSLPSPQHSIEDI--GVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPP 120

Query: 143 VPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            PPH I    G+K LVP GPN    P  PPH+I    V +L+P
Sbjct: 121 SPPHFI-ADFGVKRLVPSGPNNETFPPSPPHSIADFGVKRLVP 160


HSP 7 Score: 84.3 bits (207), Expect = 2.1e-13
Identity = 56/153 (36.60%), Postives = 70/153 (45.75%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNI-------VTNSK 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I       +  S 
Sbjct: 285 VKRLVPSGPNNETSPPSPPHSIADFGVKGLVSSGPNNETSPPSPPHSIENIGVKRLVPSC 344

Query: 83  ARNGIGELT-------LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPG 142
             N     +        G KRLV   PN      +P +     G+K LVP GPN    P 
Sbjct: 345 PNNETSPPSPPHFIADFGVKRLVPSVPNNETSPLSPPHYIADFGVKRLVPSGPNNETSPP 404

Query: 143 VPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI 162
            PPH+I   LG+K  VP GPN    P  PPH+I
Sbjct: 405 SPPHSI-ANLGVKRFVPSGPNNETSPPSPPHSI 436


HSP 8 Score: 95.5 bits (236), Expect = 9.3e-17
Identity = 59/140 (42.14%), Postives = 69/140 (49.29%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIG 82
           +KRLVP GPN+   P   PH   F   +K LV  GPN    P  PPH+I           
Sbjct: 79  VKRLVPSGPNNETSPPSPPHSADF--GVKRLVPSGPNNETSPPSPPHSIAD--------- 138

Query: 83  ELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLK 142
               G KRLV  GPN      +P +S  + G+K LVP GPN    P  PPH I    G+K
Sbjct: 139 ---YGVKRLVPSGPNNETSPPSPPHSIASFGVKRLVPSGPNNETSPPSPPHFI-ANFGVK 198

Query: 143 HLVPEGPNQAYPPGVPPHNI 162
            LVP GPN    P  PPH+I
Sbjct: 199 RLVPSGPNNETSPPSPPHSI 203

[Close]
BLAST of Cla016333 vs. NCBI nr
Match: gi|923595240|ref|XP_013739544.1| (PREDICTED: proline-rich receptor-like protein kinase PERK8 [Brassica napus])

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 61/150 (40.67%), Postives = 74/150 (49.33%), Query Frame = 1 

Query: 23  LKRLVPGGPNH-AFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIG 82
           +KRLVP GPN+   P   PH  + T  +K LV  GPN    P  PPH+            
Sbjct: 53  VKRLVPSGPNNETSPPSPPHFIEDTR-VKRLVPSGPNNETSPPSPPHSA----------- 112

Query: 83  ELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLK 142
               G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I  + G+K
Sbjct: 113 --DFGVKRLVPSGPNNETSPPSPPHSIADYGVKRLVPSGPNNETSPPSPPHSI-ASFGVK 172

Query: 143 HLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            LVP GPN    P  PPH I    V +L+P
Sbjct: 173 RLVPSGPNNETSPPSPPHFIANFGVKRLVP 187


HSP 2 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 60/152 (39.47%), Postives = 74/152 (48.68%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGI 80
           + +KRLVP GPN+     +P        +K LV  GPN    P  PPH I          
Sbjct: 25  IGVKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNETSPPSPPHFIEDTRV----- 84

Query: 81  GELTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLG 140
                  KRLV  GPN +  P   PH++ F  G+K LVP GPN    P  PPH+I    G
Sbjct: 85  -------KRLVPSGPNNETSPPSPPHSADF--GVKRLVPSGPNNETSPPSPPHSIA-DYG 144

Query: 141 LKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           +K LVP GPN    P  PPH+I    V +L+P
Sbjct: 145 VKRLVPSGPNNETSPPSPPHSIASFGVKRLVP 161


HSP 3 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 59/150 (39.33%), Postives = 72/150 (48.00%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P      + +K LV  GPN    P  PPH I            
Sbjct: 1   MKRLVPSGPNNETSPPSPPHFIEDIGVKRLVPSGPNNETSPPSPPHFIAD---------- 60

Query: 83  LTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLK 142
              G KRLV  GPN +  P   PH  + T  +K LVP GPN    P  PPH+     G+K
Sbjct: 61  --FGVKRLVPSGPNNETSPPSPPHFIEDTR-VKRLVPSGPNNETSPPSPPHSADF--GVK 120

Query: 143 HLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            LVP GPN    P  PPH+I    V +L+P
Sbjct: 121 RLVPSGPNNETSPPSPPHSIADYGVKRLVP 135


HSP 4 Score: 95.1 bits (235), Expect = 1.2e-16
Identity = 58/149 (38.93%), Postives = 73/149 (48.99%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P ++     +K LV  GPN    P  PP++I            
Sbjct: 235 VKRLVPSGPNNETSPPSPPNSITDFGVKRLVPSGPNNETSPPSPPNSITD---------- 294

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P NS    G+K LVP GPN    P  PPH+I    G+  
Sbjct: 295 --FGVKRLVPSGPNNETSPPSPPNSITDFGVKRLVPSGPNNETSPPSPPHSI-ADFGVNR 354

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 355 LVPSGPNNETSPPSPPHSIANFGVKRLVP 370

[Close]
BLAST of Cla016333 vs. NCBI nr
Match: gi|923900384|ref|XP_013720613.1| (PREDICTED: leucine-rich repeat extensin-like protein 5 [Brassica napus])

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16
Identity = 56/142 (39.44%), Postives = 68/142 (47.89%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGI 80
           + +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I          
Sbjct: 103 IEVKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNEASPPSPPHSIAD-------- 162

Query: 81  GELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGL 140
                G KRLV  GPN      +P  S    G+K LVP GPN    P  PPH+I    G+
Sbjct: 163 ----FGVKRLVPSGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPHSI-ADFGV 222

Query: 141 KHLVPEGPNQAYPPGVPPHNIV 163
             LVP GPN    P  PPH+IV
Sbjct: 223 NRLVPSGPNNETSPPSPPHSIV 231


HSP 2 Score: 94.4 bits (233), Expect = 2.1e-16
Identity = 58/149 (38.93%), Postives = 73/149 (48.99%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P      +++K LV  GPN    P  PPH+I            
Sbjct: 79  IKRLVPSGPNNETSPPSPPHFIEDIEVKRLVPSGPNNETSPPSPPHSIAD---------- 138

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  PP +I    G+K 
Sbjct: 139 --FGVKRLVPSGPNNEASPPSPPHSIADFGVKRLVPSGPNNETSPPSPPRSI-AGFGVKR 198

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 199 LVPSGPNNETSPPSPPHSIADFGVNRLVP 214


HSP 3 Score: 93.2 bits (230), Expect = 4.6e-16
Identity = 62/163 (38.04%), Postives = 77/163 (47.24%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKAR---NG 82
           +KRLVP GPN+     +P  +     +  LV  GPN    P  PPH+IV     R   +G
Sbjct: 183 VKRLVPSGPNNETSPPSPPHSIADFGVNRLVPSGPNNETSPPSPPHSIVDFGVKRLVPSG 242

Query: 83  IGELT-----------LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPG 142
               T            G KRLV  GPN      +P NS    G+K LVP GPN    P 
Sbjct: 243 PNNETSPPSPPNSITDFGVKRLVPSGPNNETSPPSPPNSITDFGVKRLVPSGPNNETSPP 302

Query: 143 VPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            PP++I    G+K LVP GPN    P  PPH+I    V +L+P
Sbjct: 303 SPPNSI-TDFGVKRLVPSGPNNETSPPSPPHSIADFGVNRLVP 344


HSP 4 Score: 90.9 bits (224), Expect = 2.3e-15
Identity = 60/165 (36.36%), Postives = 78/165 (47.27%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKAR--- 80
           + +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I      R   
Sbjct: 103 IEVKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNEASPPSPPHSIADFGVKRLVP 162

Query: 81  NGIGELT-----------LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYP 140
           +G    T            G KRLV  GPN      +P +S    G+  LVP GPN    
Sbjct: 163 SGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPHSIADFGVNRLVPSGPNNETS 222

Query: 141 PGVPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           P  PPH+I +  G+K LVP GPN    P  PP++I    V +L+P
Sbjct: 223 PPSPPHSI-VDFGVKRLVPSGPNNETSPPSPPNSITDFGVKRLVP 266


HSP 5 Score: 90.1 bits (222), Expect = 3.9e-15
Identity = 57/148 (38.51%), Postives = 70/148 (47.30%), Query Frame = 1 

Query: 24  KRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGEL 83
           KRLVP GPN+     +P  +      K LV  GPN    P  PPH+I             
Sbjct: 28  KRLVPSGPNNETSPPSPPHSTTDFGGKRLVPSGPNNETSPPSPPHSIAD----------- 87

Query: 84  TLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHL 143
             G KRLV  GPN      +P +    + +K LVP GPN    P  PPH+I    G+K L
Sbjct: 88  -FGIKRLVPSGPNNETSPPSPPHFIEDIEVKRLVPSGPNNETSPPSPPHSIA-DFGVKRL 147

Query: 144 VPEGPNQAYPPGVPPHNI----VTKLIP 168
           VP GPN    P  PPH+I    V +L+P
Sbjct: 148 VPSGPNNEASPPSPPHSIADFGVKRLVP 162


HSP 6 Score: 89.4 bits (220), Expect = 6.7e-15
Identity = 57/148 (38.51%), Postives = 70/148 (47.30%), Query Frame = 1 

Query: 24  KRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGEL 83
           KRLVP GPN+     +P  +     +K LV  GPN    P  PPH I             
Sbjct: 54  KRLVPSGPNNETSPPSPPHSIADFGIKRLVPSGPNNETSPPSPPHFIED----------- 113

Query: 84  TLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHL 143
            +  KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G+K L
Sbjct: 114 -IEVKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNEASPPSPPHSI-ADFGVKRL 173

Query: 144 VPEGPNQAYPPGVPPHNI----VTKLIP 168
           VP GPN    P  PP +I    V +L+P
Sbjct: 174 VPSGPNNETSPPSPPRSIAGFGVKRLVP 188


HSP 7 Score: 89.4 bits (220), Expect = 6.7e-15
Identity = 56/149 (37.58%), Postives = 72/149 (48.32%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 157 VKRLVPSGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPHSIAD---------- 216

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G  RLV  GPN      +P +S    G+K LVP GPN    P  PP++I    G+K 
Sbjct: 217 --FGVNRLVPSGPNNETSPPSPPHSIVDFGVKRLVPSGPNNETSPPSPPNSI-TDFGVKR 276

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PP++I    V +L+P
Sbjct: 277 LVPSGPNNETSPPSPPNSITDFGVKRLVP 292


HSP 8 Score: 89.0 bits (219), Expect = 8.7e-15
Identity = 53/139 (38.13%), Postives = 67/139 (48.20%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P ++     +K LV  GPN    P  PP++I            
Sbjct: 261 VKRLVPSGPNNETSPPSPPNSITDFGVKRLVPSGPNNETSPPSPPNSITD---------- 320

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+  LVP GPN    P  PPH+I    G+K 
Sbjct: 321 --FGVKRLVPSGPNNETSPPSPPHSIADFGVNRLVPSGPNNETSPPSPPHSI-ANFGVKR 380

Query: 143 LVPEGPNQAYPPGVPPHNI 162
           LVP  PN    P  PPH+I
Sbjct: 381 LVPSEPNNETSPPSPPHSI 386


HSP 9 Score: 87.8 bits (216), Expect = 1.9e-14
Identity = 56/149 (37.58%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP G N+     +P  +      K LV  GPN    P  PPH+             
Sbjct: 1   MKRLVPSGLNNETSPPSPPHSTTDFGGKRLVPSGPNNETSPPSPPHSTTD---------- 60

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH I+  + +K 
Sbjct: 61  --FGGKRLVPSGPNNETSPPSPPHSIADFGIKRLVPSGPNNETSPPSPPHFIE-DIEVKR 120

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 121 LVPSGPNNETSPPSPPHSIADFGVKRLVP 136


HSP 10 Score: 94.0 bits (232), Expect = 2.7e-16
Identity = 58/149 (38.93%), Postives = 73/149 (48.99%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P      +++K LV  GPN    P  PPH+I            
Sbjct: 53  IKRLVPSGPNNETSPPSPPHFIEDIEVKRLVPSGPNNETSPPSPPHSIAD---------- 112

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G+K 
Sbjct: 113 --FGIKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNEASPPSPPHSI-ADFGVKR 172

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PP +I    V +L+P
Sbjct: 173 LVPSGPNNETSPPSPPRSIAGFGVKRLVP 188

[Close]
BLAST of Cla016333 vs. NCBI nr
Match: gi|685290186|ref|XP_009136047.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Brassica rapa])

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-16
Identity = 58/149 (38.93%), Postives = 71/149 (47.65%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 105 IKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNEASPPSPPHSIAD---------- 164

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P  S    G+K LVP GPN    P  PP +I    G+K 
Sbjct: 165 --FGVKRLVPSGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPRSI-AGFGVKR 224

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 225 LVPSGPNNETSPPSPPHSIADFGVKRLVP 240


HSP 2 Score: 92.8 bits (229), Expect = 6.0e-16
Identity = 58/148 (39.19%), Postives = 71/148 (47.97%), Query Frame = 1 

Query: 24  KRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGEL 83
           KRLVP GPN+     +P  +     +K LV  GPN    P  PPH I             
Sbjct: 28  KRLVPSGPNNETSPPSPPHSIADFGIKRLVPSGPNNETSPPSPPHFIED----------- 87

Query: 84  TLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKHL 143
            +  KRLV  GPN      +P +S    G+K LVP GPN    P  PPH+I    G+K L
Sbjct: 88  -IEVKRLVPSGPNNETSPPSPPHSIADFGIKRLVPSGPNNETSPPSPPHSI-ADFGVKRL 147

Query: 144 VPEGPNQAYPPGVPPHNI----VTKLIP 168
           VP GPN    P  PPH+I    V +L+P
Sbjct: 148 VPSGPNNEASPPSPPHSIADFGVKRLVP 162


HSP 3 Score: 91.7 bits (226), Expect = 1.3e-15
Identity = 57/151 (37.75%), Postives = 72/151 (47.68%), Query Frame = 1 

Query: 21  LSLKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGI 80
           + +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I          
Sbjct: 77  IEVKRLVPSGPNNETSPPSPPHSIADFGIKRLVPSGPNNETSPPSPPHSIAD-------- 136

Query: 81  GELTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGL 140
                G KRLV  GPN      +P +S    G+K LVP GPN    P  PP +I    G+
Sbjct: 137 ----FGVKRLVPSGPNNEASPPSPPHSIADFGVKRLVPSGPNNETSPPSPPRSI-AGFGV 196

Query: 141 KHLVPEGPNQAYPPGVPPHNI----VTKLIP 168
           K LVP GPN    P  PP +I    V +L+P
Sbjct: 197 KRLVPSGPNNETSPPSPPRSIAGFGVKRLVP 214


HSP 4 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 58/153 (37.91%), Postives = 70/153 (45.75%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKAR---NG 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I      R   +G
Sbjct: 105 IKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNEASPPSPPHSIADFGVKRLVPSG 164

Query: 83  IGELT-----------LGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPG 142
               T            G KRLV  GPN      +P  S    G+K LVP GPN    P 
Sbjct: 165 PNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPP 224

Query: 143 VPPHNIKLTLGLKHLVPEGPNQAYPPGVPPHNI 162
            PPH+I    G+K LVP GPN    P  P H+I
Sbjct: 225 SPPHSI-ADFGVKRLVPSGPNNETSPPSPLHSI 256


HSP 5 Score: 87.4 bits (215), Expect = 2.5e-14
Identity = 56/149 (37.58%), Postives = 70/149 (46.98%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP G N+     +P  +      K LV  GPN    P  PPH+I            
Sbjct: 1   MKRLVPSGLNNETSPPSPPHSTTDFGGKRLVPSGPNNETSPPSPPHSIAD---------- 60

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +    + +K LVP GPN    P  PPH+I    G+K 
Sbjct: 61  --FGIKRLVPSGPNNETSPPSPPHFIEDIEVKRLVPSGPNNETSPPSPPHSIA-DFGIKR 120

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
           LVP GPN    P  PPH+I    V +L+P
Sbjct: 121 LVPSGPNNETSPPSPPHSIADFGVKRLVP 136


HSP 6 Score: 86.3 bits (212), Expect = 5.6e-14
Identity = 53/139 (38.13%), Postives = 65/139 (46.76%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PPH+I            
Sbjct: 183 VKRLVPSGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPHSIAD---------- 242

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+   VP GPN    P  PPH+I    G+K 
Sbjct: 243 --FGVKRLVPSGPNNETSPPSPLHSIADFGVNRSVPSGPNNETSPPSPPHSI-ANFGVKR 302

Query: 143 LVPEGPNQAYPPGVPPHNI 162
           LVP  PN    P  PPH+I
Sbjct: 303 LVPSKPNNETFPPSPPHSI 308


HSP 7 Score: 84.7 bits (208), Expect = 1.6e-13
Identity = 55/149 (36.91%), Postives = 69/149 (46.31%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P  +     +K LV  GPN    P  PP +I            
Sbjct: 157 VKRLVPSGPNNETSPPSPPRSIAGFGVKRLVPSGPNNETSPPSPPRSIAG---------- 216

Query: 83  LTLGPKRLVLGGPNQAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLKH 142
              G KRLV  GPN      +P +S    G+K LVP GPN    P  P H+I    G+  
Sbjct: 217 --FGVKRLVPSGPNNETSPPSPPHSIADFGVKRLVPSGPNNETSPPSPLHSI-ADFGVNR 276

Query: 143 LVPEGPNQAYPPGVPPHNI----VTKLIP 168
            VP GPN    P  PPH+I    V +L+P
Sbjct: 277 SVPSGPNNETSPPSPPHSIANFGVKRLVP 292


HSP 8 Score: 93.6 bits (231), Expect = 3.5e-16
Identity = 62/150 (41.33%), Postives = 74/150 (49.33%), Query Frame = 1 

Query: 23  LKRLVPGGPNHAFPLETPHDNKFTLDLKHLVLEGPNQAYPPGVPPHNIVTNSKARNGIGE 82
           +KRLVP GPN+     +P        +K LV  GPN    P  PPH IV           
Sbjct: 117 VKRLVPSGPNNETSPPSPPHFIADFGVKRLVPSGPNNEPSPPSPPHFIVD---------- 176

Query: 83  LTLGPKRLVLGGPN-QAFPSKTPHNSKFTLGLKHLVPEGPNQAYPPGVPPHNIKLTLGLK 142
              G KRLV  GPN +  PS +PH S    G+K LVP GPN    P  PPH+I    G+K
Sbjct: 177 --FGVKRLVPSGPNNETSPSSSPH-SIADFGVKRLVPSGPNNETSPPSPPHSI-ADFGVK 236

Query: 143 HLVPEGPNQAYPPGVPPHNI----VTKLIP 168
            LVP GPN    P   PH+I    V +L+P
Sbjct: 237 RLVPSGPNNETSPSSSPHSIADFGVKRLVP 252

The following BLAST results are available for this feature:
BLAST of Cla016333 vs. TrEMBL
Match NameE-valueIdentityDescription
M4D9I0_BRARP1.0e-1739.60Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
M4D9I0_BRARP1.0e-1739.60Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A0D3BC81_BRAOL4.2e-1640.00Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A0D3BDL9_BRAOL1.3e-1234.90Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A078GEA8_BRANA7.2e-0835.71BnaC03g41060D protein OS=Brassica napus GN=BnaC03g41060D PE=4 SV=1[more]
BLAST of Cla016333 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|923771819|ref|XP_013679797.1|3.2e-1743.05PREDICTED: leucine-rich repeat extensin-like protein 5 [Brassica napus][more]
gi|923771819|ref|XP_013679797.1|2.1e-1639.63PREDICTED: leucine-rich repeat extensin-like protein 5 [Brassica napus][more]
gi|923595240|ref|XP_013739544.1|1.0e-1540.67PREDICTED: proline-rich receptor-like protein kinase PERK8 [Brassica napus][more]
gi|923900384|ref|XP_013720613.1|1.2e-1639.44PREDICTED: leucine-rich repeat extensin-like protein 5 [Brassica napus][more]
gi|685290186|ref|XP_009136047.1|4.6e-1638.93PREDICTED: proline-rich receptor-like protein kinase PERK10 [Brassica rapa][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla016333Cla016333.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla016333Cla97C09G173460Watermelon (97103) v2wmwmbB041
Cla016333ClCG09G010740Watermelon (Charleston Gray)wcgwmB007
Cla016333CmaCh01G009500Cucurbita maxima (Rimu)cmawmB406
Cla016333Lsi02G019100Bottle gourd (USVL1VR-Ls)lsiwmB175
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla016333Melon (DHL92) v3.5.1mewmB201
Cla016333Cucumber (Chinese Long) v2cuwmB555
Cla016333Cucumber (Gy14) v2cgybwmB519
Cla016333Melon (DHL92) v3.6.1medwmB200
Cla016333Cucumber (Chinese Long) v3cucwmB581
Cla016333Wax gourdwgowmB580
Cla016333Cucumber (Gy14) v1cgywmB440
Cla016333Cucumber (Gy14) v1cgywmB452
Cla016333Cucurbita moschata (Rifu)cmowmB401
Cla016333Wild cucumber (PI 183967)cpiwmB573
Cla016333Wild cucumber (PI 183967)cpiwmB582