Cla016288 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla016288
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Protein tyrosine phosphatase (AHRD V1 ***- E9CIF9_CAPO3); contains Interpro domain(s) IPR004861 Protein-tyrosine phosphatase, SIW14-like
Location	Chr9 : 10350853 .. 10353309 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATCGACCACCACTCCGATCAAACCACCGATGATGATTCCCACCATCTCCATCCTACTCTTCCCACGCCAGTTGTCGCCAATGGCACCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCCCTGAACTTCGCTGTCGTTGACAACGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTCTTGCAGACGTTAGGCCTTCGTTCGATTATGTATGACTTTTCCCTACTGATTCTTTCTTTATTTGCTTTCGTTCTTCTGTTTGTCTGTTCTTGATTTTGTGTTTCGAGAGATAATCGATGATTGAGAATGAACTGATTGTAACGGATATTGTAGATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGTTTGTTCTTACTTTATCGAAATATCCTTATTGAGAGATATAGTTTATGTGAGCTTGTCTATGTATTTGATATCTTAGTCAGGGCTAATGCTAAAGTGCAAAAGTTAATTTGTCCTCTCGACGGCTTTTCTGTTTGAATTTATCGTTTTCTGATGCTTCAGTGAATTTGATTTTTGACCTTTTATGTCAAATGTCAATTCCCAAATTCTCATGGGAAGCTTCTATTAAAGTGATTTTTGTGATAATGCGTTTGTATGCATATGAACTTAACTAGAGAGACTAGAACTACTCTTGGCTTGAAGTTGTTTCTGATAATAAAATATGGGTTTGGTTTTGGTAAATTTGTTATGTAAGGAAAACAATTAAGATACAAGTATTTGATGGTGAGCCAATCCAAAGGACTTTAAAGAGAGTACTTTAAACACCTTAGTTTAATTGACTGCTTTCGACTGTTTCTATGCGTTTATGAAAACTGTTTTGGGGATTTAGCTAACAAAATTTAGCTTGTGTAAATTGTCTAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATATGAGCGCTGATCAAATGTACTATTTGGTATGAAATTTGATCTGACTAAATGCTATTCCCAGTTATTTCTGAAATGCATCAACATATTGAATTCAATTTGTCAATAATTAAATTTACACTTTTGACCACTTTCTTCCTGGTTTTGTTGAACTCAATTAAGCAATGATTTGATCAATACATATAAACACACACATACACACAAGGAGAAAGTAAAGACAGAGAGGGAGGAGCGAGGCTAGGCTGGCTGTATGATTATCATCATTTATCATTGCCTTGGGCTACTATACATATCATTTTTGTGGGGTTTTGTGAGGGAAGGGGCGTTTAGACTTCCTTTAGAACTGTTCCATTGGTTATAAAGCTTCCACGTTCCTTTTGATTGAGAAATAGGATGAAATTGCTTTGTTTTCCTGACATATACCGATTGTCAACTGAATGCTTATTGTTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTTTTAAAAAGAATATTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAACCGATAGAAAACTCAAGAACCCAAGAGGTTAAGAGGTTGCATCATCCTTTCCTTGCTTTGTTTTGTTTTAGTGTCATGCCAATGGGAATTTTTAATATTTGGAACTTGGAAGTAATGATCTTTAACCATAGTTCGAATGTTTAACATAAGAATCAACTGCCTGGTTGGCAATTGCATAGCAGGGTTCCATTGATGATGTATAGTCTAAAAGAACGCTGATCATTTTGGTTCTGTTGAAATGAAATGCAGGAGCCTTTTGTGAACATTCCAGACTACACAATTCGTGAAGTACTTAAAGTTATTCTTGGTACCTACCACTATCAATAGTGCACATTTTTAAATCTTCAATGAGGCTAACTCAGTAGGTCTTTAAATGTTTTGTAGTTTGGATATGTGTTCACTCGGGCATTATTTTTTCACCATGCAGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGGTATGTACTGATAAAAGCATCCATATACTAACCCATCAATTTATGCTTTTAAATTGAGTAGTGATTTAATATGTTATCAGAATACGAAGTCTTTGTGTTTGAACTAGTTTAAGCTCTTGGGTTAAATGGTGATTTTAAAAGTAGGCAATAGCTTCTACCATGGGTACTGCTTTTTATGGAGTTTCTAATTGGTTAACTTGTTTCTTACTCTTCAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCACCATCATTTTCTTGTTCCGAAAGGTAA

mRNA sequence

ATGACAATCGACCACCACTCCGATCAAACCACCGATGATGATTCCCACCATCTCCATCCTACTCTTCCCACGCCAGTTGTCGCCAATGGCACCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCCCTGAACTTCGCTGTCGTTGACAACGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTCTTGCAGACGTTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATATGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTACACAATTCGTGAAGTACTTAAAGTTATTCTTGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCACCATCATTTTCTTGTTCCGAAAGGTAA

Coding sequence (CDS)

ATGACAATCGACCACCACTCCGATCAAACCACCGATGATGATTCCCACCATCTCCATCCTACTCTTCCCACGCCAGTTGTCGCCAATGGCACCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCCCTGAACTTCGCTGTCGTTGACAACGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCTTTCTTGCAGACGTTAGGCCTTCGTTCGATTATATGTCTTTGTCCCGAGCCATATCCTGAGGCCAACATGGATTTTCTCAAGTCCAATGGGATCCGATTGTTTCAATTTGGGATTGAAGGTTCTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAGGAATTTGGATATGAGCGCTGATCAAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACTACACAATTCGTGAAGTACTTAAAGTTATTCTTGATGTGAGGAATCGCCCAGTTTTAATCCATTGCAAGCGAGGGAAGCACCGAACTGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCGTCAGTGTTTGATGAGTACCAGCGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACATTTCTGGCTTGAAGCATTTGCCACCATCATTTTCTTGTTCCGAAAGGTAA

Protein sequence

MTIDHHSDQTTDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER

Homology

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BLAST of Cla016288 vs. Swiss-Prot
Match: Y1500_ARATH (Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g05000 PE=1 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.2e-72
Identity = 134/199 (67.34%), Postives = 152/199 (76.38%), Query Frame = 1


Query: 36  AGDDL-FVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKS 95
           +G++L  +PPLNF++VDNGIFRSGFPDS+NFSFLQTLGLRSII LCPEPYPE+N+ FLKS
Sbjct: 47  SGEELHLIPPLNFSMVDNGIFRSGFPDSANFSFLQTLGLRSIIYLCPEPYPESNLQFLKS 106

Query: 96  NGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLK 155
           NGIRLFQFGIEG+K                              EPFVNIPD+ IR  LK
Sbjct: 107 NGIRLFQFGIEGNK------------------------------EPFVNIPDHKIRMALK 166

Query: 156 VILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIE 215
           V+LD +N PVLIHCKRGKHRTGC+VGC RKLQKWCL+S+FDEYQRFAAAKARVSDQRF+E
Sbjct: 167 VLLDEKNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSIFDEYQRFAAAKARVSDQRFME 215

Query: 216 LFDISGLKHLPPSFSCSER 234
           +FD+S   H+P SFSCS R
Sbjct: 227 IFDVSSFSHIPMSFSCSIR 215

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BLAST of Cla016288 vs. Swiss-Prot
Match: SIW14_YEAST (Tyrosine-protein phosphatase SIW14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIW14 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.5e-41
Identity = 83/184 (45.11%), Postives = 113/184 (61.41%), Query Frame = 1


Query: 42  VPPLNFAVVDNGIFRSGFPDSSNFSFL-QTLGLRSIICLCPEPYPEANMDFLKSNGIRLF 101
           +PP NF+ V   I+RS FP   NFSFL + L L+SI+ L PE YP+ N++FLK  GI+L+
Sbjct: 117 IPPENFSHVVGEIYRSSFPRQENFSFLHERLKLKSILVLIPEEYPQENLNFLKLTGIKLY 176

Query: 102 QFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVR 161
           Q G+ G+K                              EPFVNIP + + + L+++L+  
Sbjct: 177 QVGMSGNK------------------------------EPFVNIPSHLLTKALEIVLNPA 236

Query: 162 NRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISG 221
           N+P+LIHC RGKHRTGC++GC RKLQ W L+ +FDEY+RFA  KAR  DQ+FIE++D   
Sbjct: 237 NQPILIHCNRGKHRTGCLIGCIRKLQNWSLTMIFDEYRRFAFPKARALDQQFIEMYDDDE 270

Query: 222 LKHL 225
           +K +
Sbjct: 297 IKRI 270

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BLAST of Cla016288 vs. Swiss-Prot
Match: D1060_DICDI (Probable tyrosine-protein phosphatase DG1060 OS=Dictyostelium discoideum GN=DG1060 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 6.9e-26
Identity = 65/176 (36.93%), Postives = 96/176 (54.55%), Query Frame = 1


Query: 42  VPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQ 101
           +PPLNF +V + ++RSG P+  NF FL+ L L+ II L P+   +   +F++   I L  
Sbjct: 5   IPPLNFGMVADDLYRSGQPNELNFPFLEKLQLKKIIFLAPDDPSQQFQNFVEDQDIELIH 64

Query: 102 FGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRN 161
            G+          D + N                    P+  I +  +   LK+IL+  N
Sbjct: 65  LGM----------DTHQN--------------------PWNPISEEIVISALKIILNPDN 124

Query: 162 RPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFD 218
            P+ I C  G+HRTG VVGC RKLQ+W L+S+F+EY+RFA +K ++ +++FIELFD
Sbjct: 125 YPLHIMCNLGRHRTGTVVGCLRKLQRWNLTSIFEEYRRFAGSKVKLLNEQFIELFD 150

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BLAST of Cla016288 vs. Swiss-Prot
Match: OCA1_USTMA (Putative tyrosine-protein phosphatase OCA1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=OCA1 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 63/179 (35.20%), Postives = 90/179 (50.28%), Query Frame = 1


Query: 40  LFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRL 99
           + VPP N+ +V+   +RSG PD  NF FL+ LGL+S+I L PE      +DF     I L
Sbjct: 1   MLVPPPNYGMVEENFYRSGQPDQLNFPFLEKLGLKSVIWLAPEEPEPGFLDFCVDQNIEL 60

Query: 100 FQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDV 159
              G+                              +Y    +  I +  + + L +++  
Sbjct: 61  HHLGV------------------------------LYSTNAWDPITEEVVLQALHLLVQP 120

Query: 160 RNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAA-KARVSDQRFIELFD 218
              PVL+ C  G+HRTG VVGCFRKLQ+W LS++ +EY+RF    K R+ +++FIELFD
Sbjct: 121 ATYPVLVMCNLGRHRTGTVVGCFRKLQRWNLSAILEEYRRFVGGQKYRILNEQFIELFD 149

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BLAST of Cla016288 vs. Swiss-Prot
Match: OCA1_PICST (Putative tyrosine-protein phosphatase OCA1 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=OCA1 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.3e-23
Identity = 60/182 (32.97%), Postives = 99/182 (54.40%), Query Frame = 1


Query: 42  VPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQ 101
           +PPLNF  V+  ++RSG P + N SFL+ L L++I+ L  E   +  ++F   + I +  
Sbjct: 36  IPPLNFCPVERQLYRSGQPSAINQSFLEQLNLKTILWLASEEPQDDFLEFSNDHNINI-- 95

Query: 102 FGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRN 161
                          +V +I E     + + +Q   + P+  + + TI+  L++I++  N
Sbjct: 96  --------------EFVGIINEFSNYQNYNTNQTLTVNPWDALNEQTIKRALELIVNREN 155

Query: 162 RPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAK-ARVSDQRFIELFDISG 221
            P+L+ C  G+HRTG V+GC R+LQ W L+SV +EY+RF  A+  R+  +  IE FDI  
Sbjct: 156 YPLLVCCGMGRHRTGTVIGCLRRLQGWNLASVSEEYRRFTGARGGRILVELLIESFDIGS 201

Query: 222 LK 223
           ++
Sbjct: 216 VE 201

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BLAST of Cla016288 vs. TrEMBL
Match: A0A0A0KE54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421640 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 4.3e-120
Identity = 215/239 (89.96%), Postives = 222/239 (92.89%), Query Frame = 1


Query: 1   MTIDHHSDQT------TDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGI 60
           MTIDH SDQT       D DS HLHPTLPTP+++NGTD  NAGDDLFVPPLNFAVVD GI
Sbjct: 1   MTIDHMSDQTRTSTSNNDHDSDHLHPTLPTPLLSNGTDYNNAGDDLFVPPLNFAVVDTGI 60

Query: 61  FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKV 120
           FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEA+MDFL SNGIRLFQFGIEGSKAGSDKV
Sbjct: 61  FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLNSNGIRLFQFGIEGSKAGSDKV 120

Query: 121 DAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHR 180
           DAYVNLILECMRNLDMSADQMY+LEPFVNIPDYTIREVLK+ILDVRNRPVLIHCKRGKHR
Sbjct: 121 DAYVNLILECMRNLDMSADQMYFLEPFVNIPDYTIREVLKIILDVRNRPVLIHCKRGKHR 180

Query: 181 TGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           TGCVVGCFRK+QKWCLSSVFDEYQRFAAAKARVSDQRFIELFDIS LK LP SFSCSER
Sbjct: 181 TGCVVGCFRKVQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISELKLLPSSFSCSER 239

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BLAST of Cla016288 vs. TrEMBL
Match: R9Q9C6_FRAVE (Tyrosine-protein phosphatase OS=Fragaria vesca GN=PTP PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-78
Identity = 148/220 (67.27%), Postives = 168/220 (76.36%), Query Frame = 1


Query: 14  DSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGL 73
           D  HL P++ +   A+G   E   DDLF+PPLNFA+VDNGIFRSGFPDSSNFSFLQTLGL
Sbjct: 21  DVLHLSPSVASAAAADGG--EECADDLFMPPLNFAMVDNGIFRSGFPDSSNFSFLQTLGL 80

Query: 74  RSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSAD 133
           RSIICLCPEPYPE N++FLKSNGI+LFQFGIEG                           
Sbjct: 81  RSIICLCPEPYPETNVEFLKSNGIKLFQFGIEG--------------------------- 140

Query: 134 QMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSV 193
              Y EPFVNIP+ TIRE LKV+LDVRN P+LIHCKRGKHRTGCVVGC RKLQ+WCLSSV
Sbjct: 141 ---YKEPFVNIPEDTIREALKVVLDVRNHPILIHCKRGKHRTGCVVGCLRKLQRWCLSSV 200

Query: 194 FDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           FDEYQRFAAAKAR++DQRF+E+FD+S LKH+P  FSCS+R
Sbjct: 201 FDEYQRFAAAKARIADQRFMEMFDVSSLKHVPMPFSCSKR 208

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BLAST of Cla016288 vs. TrEMBL
Match: W9SG98_9ROSA (Putative tyrosine-protein phosphatase OS=Morus notabilis GN=L484_004819 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.2e-78
Identity = 146/197 (74.11%), Postives = 159/197 (80.71%), Query Frame = 1


Query: 37  GDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNG 96
           G+DLF+PPLNFA+VDNGIFRSGFPDS+NFSFLQTLGLRSIICLCPEPYPEANM+FLK+NG
Sbjct: 53  GEDLFIPPLNFAMVDNGIFRSGFPDSANFSFLQTLGLRSIICLCPEPYPEANMEFLKANG 112

Query: 97  IRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVI 156
           IRLFQFGIEG                              Y EPFVNIP+ TIRE LKV+
Sbjct: 113 IRLFQFGIEG------------------------------YKEPFVNIPEDTIREALKVV 172

Query: 157 LDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELF 216
           LDVRN PVLIHCKRGKHRTGC+VGC RKLQKWCL+SVFDEYQRFAAAKARVSDQRF+E+F
Sbjct: 173 LDVRNHPVLIHCKRGKHRTGCLVGCLRKLQKWCLTSVFDEYQRFAAAKARVSDQRFMEMF 219

Query: 217 DISGLKHLPPSFSCSER 234
           D+S LKHLP SFSCS R
Sbjct: 233 DVSSLKHLPMSFSCSNR 219

[Close]

BLAST of Cla016288 vs. TrEMBL
Match: M5WTZ9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011399mg PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.0e-77
Identity = 150/236 (63.56%), Postives = 170/236 (72.03%), Query Frame = 1


Query: 5   HHSDQTTDDDSHHLHPTL-------PTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRS 64
           HH DQ T  +       +       P   VA   DC    DDLF+PPLNF++VDNGIFRS
Sbjct: 10  HHQDQGTKTEMCRTIEVVAGGVVLSPAKQVAGADDC---ADDLFIPPLNFSMVDNGIFRS 69

Query: 65  GFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAY 124
           GFP+S+NFSFLQTLGLRSIICLCPEPYPEAN++FLKSNGI+LFQFGIEG           
Sbjct: 70  GFPESANFSFLQTLGLRSIICLCPEPYPEANVEFLKSNGIKLFQFGIEG----------- 129

Query: 125 VNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGC 184
                              Y EPFVNIP+ TIRE LKV+LDVRN PVLIHCKRGKHRTGC
Sbjct: 130 -------------------YKEPFVNIPEDTIREALKVVLDVRNHPVLIHCKRGKHRTGC 189

Query: 185 VVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           +VGC RKLQ+WCL+SVFDEYQRFAAAKARV+DQRF+E+FD+S LKHLP  FSCS+R
Sbjct: 190 LVGCLRKLQRWCLTSVFDEYQRFAAAKARVADQRFMEMFDVSSLKHLPMPFSCSKR 212

[Close]

BLAST of Cla016288 vs. TrEMBL
Match: V7BB38_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G214300g PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.9e-76
Identity = 153/236 (64.83%), Postives = 171/236 (72.46%), Query Frame = 1


Query: 5   HHSD-------QTTDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRS 64
           HH D       Q T  D H L  T  T V A+G   +  G+DLF+PPLNFA+VDNGIFRS
Sbjct: 12  HHQDTPMCRQIQLTITD-HTLSQT--TAVAADGASDKLDGEDLFIPPLNFAMVDNGIFRS 71

Query: 65  GFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAY 124
           GFP+ +NFSFLQTLGLRSII LCPEPYPEANM+FLKSNGI+L+ FGIEG K         
Sbjct: 72  GFPEPANFSFLQTLGLRSIIYLCPEPYPEANMEFLKSNGIKLYHFGIEGHK--------- 131

Query: 125 VNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGC 184
                                EPFVNIP+ TIRE LKV+LDVRN PV+IHCKRGKHRTGC
Sbjct: 132 ---------------------EPFVNIPEDTIREALKVVLDVRNHPVIIHCKRGKHRTGC 191

Query: 185 VVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           +VGC+RKLQKWCLSSVFDEYQRFAAAKARVSDQRF+ELFDIS +KHLP  FSC +R
Sbjct: 192 LVGCYRKLQKWCLSSVFDEYQRFAAAKARVSDQRFVELFDISSMKHLPIPFSCLKR 214

[Close]

BLAST of Cla016288 vs. NCBI nr
Match: gi|659097180|ref|XP_008449484.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucumis melo])

HSP 1 Score: 439.9 bits (1130), Expect = 2.8e-120
Identity = 220/242 (90.91%), Postives = 223/242 (92.15%), Query Frame = 1


Query: 1   MTIDH----HSDQT-----TDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVD 60
           MTIDH     SDQT      DDDS HLHPTLP+PVVANGTD  NAGDDLFVPPLNFAVVD
Sbjct: 1   MTIDHIHSQPSDQTRSSTSNDDDSDHLHPTLPSPVVANGTDYNNAGDDLFVPPLNFAVVD 60

Query: 61  NGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGS 120
            GIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEA+MDFL SNGIRLFQF IEGSKAGS
Sbjct: 61  TGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLNSNGIRLFQFEIEGSKAGS 120

Query: 121 DKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRG 180
           DKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRG
Sbjct: 121 DKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRG 180

Query: 181 KHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCS 234
           KHRTGCVVGCFRK+QKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLK LP SFSCS
Sbjct: 181 KHRTGCVVGCFRKVQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKLLPSSFSCS 240

[Close]

BLAST of Cla016288 vs. NCBI nr
Match: gi|778716493|ref|XP_011657551.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucumis sativus])

HSP 1 Score: 438.7 bits (1127), Expect = 6.2e-120
Identity = 215/239 (89.96%), Postives = 222/239 (92.89%), Query Frame = 1


Query: 1   MTIDHHSDQT------TDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGI 60
           MTIDH SDQT       D DS HLHPTLPTP+++NGTD  NAGDDLFVPPLNFAVVD GI
Sbjct: 1   MTIDHMSDQTRTSTSNNDHDSDHLHPTLPTPLLSNGTDYNNAGDDLFVPPLNFAVVDTGI 60

Query: 61  FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKV 120
           FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEA+MDFL SNGIRLFQFGIEGSKAGSDKV
Sbjct: 61  FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLNSNGIRLFQFGIEGSKAGSDKV 120

Query: 121 DAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHR 180
           DAYVNLILECMRNLDMSADQMY+LEPFVNIPDYTIREVLK+ILDVRNRPVLIHCKRGKHR
Sbjct: 121 DAYVNLILECMRNLDMSADQMYFLEPFVNIPDYTIREVLKIILDVRNRPVLIHCKRGKHR 180

Query: 181 TGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           TGCVVGCFRK+QKWCLSSVFDEYQRFAAAKARVSDQRFIELFDIS LK LP SFSCSER
Sbjct: 181 TGCVVGCFRKVQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISELKLLPSSFSCSER 239

[Close]

BLAST of Cla016288 vs. NCBI nr
Match: gi|449444727|ref|XP_004140125.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucumis sativus])

HSP 1 Score: 364.8 bits (935), Expect = 1.1e-97
Identity = 186/239 (77.82%), Postives = 192/239 (80.33%), Query Frame = 1


Query: 1   MTIDHHSDQT------TDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVDNGI 60
           MTIDH SDQT       D DS HLHPTLPTP+++NGTD  NAGDDLFVPPLNFAVVD GI
Sbjct: 1   MTIDHMSDQTRTSTSNNDHDSDHLHPTLPTPLLSNGTDYNNAGDDLFVPPLNFAVVDTGI 60

Query: 61  FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGSDKV 120
           FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEA+MDFL SNGIRLFQFGIEGSK      
Sbjct: 61  FRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLNSNGIRLFQFGIEGSK------ 120

Query: 121 DAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRGKHR 180
                                   EPFVNIPDYTIREVLK+ILDVRNRPVLIHCKRGKHR
Sbjct: 121 ------------------------EPFVNIPDYTIREVLKIILDVRNRPVLIHCKRGKHR 180

Query: 181 TGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           TGCVVGCFRK+QKWCLSSVFDEYQRFAAAKARVSDQRFIELFDIS LK LP SFSCSER
Sbjct: 181 TGCVVGCFRKVQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISELKLLPSSFSCSER 209

[Close]

BLAST of Cla016288 vs. NCBI nr
Match: gi|659097182|ref|XP_008449485.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucumis melo])

HSP 1 Score: 364.4 bits (934), Expect = 1.5e-97
Identity = 190/242 (78.51%), Postives = 193/242 (79.75%), Query Frame = 1


Query: 1   MTIDH----HSDQT-----TDDDSHHLHPTLPTPVVANGTDCENAGDDLFVPPLNFAVVD 60
           MTIDH     SDQT      DDDS HLHPTLP+PVVANGTD  NAGDDLFVPPLNFAVVD
Sbjct: 1   MTIDHIHSQPSDQTRSSTSNDDDSDHLHPTLPSPVVANGTDYNNAGDDLFVPPLNFAVVD 60

Query: 61  NGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEANMDFLKSNGIRLFQFGIEGSKAGS 120
            GIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEA+MDFL SNGIRLFQF IEGSK   
Sbjct: 61  TGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLNSNGIRLFQFEIEGSK--- 120

Query: 121 DKVDAYVNLILECMRNLDMSADQMYYLEPFVNIPDYTIREVLKVILDVRNRPVLIHCKRG 180
                                      EPFVNIPDYTIREVLKVILDVRNRPVLIHCKRG
Sbjct: 121 ---------------------------EPFVNIPDYTIREVLKVILDVRNRPVLIHCKRG 180

Query: 181 KHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKHLPPSFSCS 234
           KHRTGCVVGCFRK+QKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLK LP SFSCS
Sbjct: 181 KHRTGCVVGCFRKVQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKLLPSSFSCS 212

[Close]

BLAST of Cla016288 vs. NCBI nr
Match: gi|1009128397|ref|XP_015881208.1| (PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Ziziphus jujuba])

HSP 1 Score: 302.4 bits (773), Expect = 7.0e-79
Identity = 148/211 (70.14%), Postives = 164/211 (77.73%), Query Frame = 1


Query: 23  PTPVVANGTDCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPE 82
           P P+V  G DC+  G+ LF PPLNFA+VDNGIFRSGFPDS+NF+FLQTLGLRSIIC+CPE
Sbjct: 36  PEPMVTVGDDCDRDGEGLFTPPLNFAMVDNGIFRSGFPDSANFAFLQTLGLRSIICMCPE 95

Query: 83  PYPEANMDFLKSNGIRLFQFGIEGSKAGSDKVDAYVNLILECMRNLDMSADQMYYLEPFV 142
           PYPEANM+FLKSNGIRLFQFGIEG                              Y EPFV
Sbjct: 96  PYPEANMEFLKSNGIRLFQFGIEG------------------------------YKEPFV 155

Query: 143 NIPDYTIREVLKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAA 202
           NIP+ TIR+ LKV+LDVRN P+LIHCKRGKHRTGC+VGC RKLQ+WCLSSVFDEYQRFAA
Sbjct: 156 NIPEDTIRDALKVVLDVRNHPILIHCKRGKHRTGCLVGCMRKLQRWCLSSVFDEYQRFAA 215

Query: 203 AKARVSDQRFIELFDISGLKHLPPSFSCSER 234
           AKARVSDQRF+ELFDIS LKHLP  FS S+R
Sbjct: 216 AKARVSDQRFMELFDISSLKHLPMPFSFSKR 216

The following BLAST results are available for this feature:

BLAST of Cla016288 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1500_ARATH	2.2e-72	67.34	Probable tyrosine-protein phosphatase At1g05000 OS=Arabidopsis thaliana GN=At1g0...	[more]
SIW14_YEAST	7.5e-41	45.11	Tyrosine-protein phosphatase SIW14 OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]
D1060_DICDI	6.9e-26	36.93	Probable tyrosine-protein phosphatase DG1060 OS=Dictyostelium discoideum GN=DG10...	[more]
OCA1_USTMA	4.4e-25	35.20	Putative tyrosine-protein phosphatase OCA1 OS=Ustilago maydis (strain 521 / FGSC...	[more]
OCA1_PICST	9.3e-23	32.97	Putative tyrosine-protein phosphatase OCA1 OS=Scheffersomyces stipitis (strain A...	[more]

BLAST of Cla016288 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KE54_CUCSA	4.3e-120	89.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G421640 PE=4 SV=1	[more]
R9Q9C6_FRAVE	1.4e-78	67.27	Tyrosine-protein phosphatase OS=Fragaria vesca GN=PTP PE=2 SV=1	[more]
W9SG98_9ROSA	3.2e-78	74.11	Putative tyrosine-protein phosphatase OS=Morus notabilis GN=L484_004819 PE=4 SV=...	[more]
M5WTZ9_PRUPE	2.0e-77	63.56	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011399mg PE=4 SV=1	[more]
V7BB38_PHAVU	3.9e-76	64.83	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_008G214300g PE=4 SV=1	[more]

BLAST of Cla016288 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659097180\|ref\|XP_008449484.1\|	2.8e-120	90.91	PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucumis m...	[more]
gi\|778716493\|ref\|XP_011657551.1\|	6.2e-120	89.96	PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Cucumis s...	[more]
gi\|449444727\|ref\|XP_004140125.1\|	1.1e-97	77.82	PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucumis s...	[more]
gi\|659097182\|ref\|XP_008449485.1\|	1.5e-97	78.51	PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X2 [Cucumis m...	[more]
gi\|1009128397\|ref\|XP_015881208.1\|	7.0e-79	70.14	PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004861	Siw14-like
IPR016130	Tyr_Pase_AS
IPR020428	PFA-DSPs

Vocabulary: **Molecular Function**
Term	Definition
GO:0004725	protein tyrosine phosphatase activity
GO:0016791	phosphatase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016311	dephosphorylation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035335	peptidyl-tyrosine dephosphorylation
biological_process	GO:0006570	tyrosine metabolic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0006470	protein dephosphorylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004725	protein tyrosine phosphatase activity
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla016288	Cla016288.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004861	Protein-tyrosine phosphatase, SIW14-like	PFAM	PF03162	Y_phosphatase2	coord: 42..220 score: 2.3
IPR016130	Protein-tyrosine phosphatase, active site	PROSITE	PS00383	TYR_PHOSPHATASE_1	coord: 166..176 scor
IPR020428	Protein-tyrosine phosphatase SIW14-like, eukaryotic	PRINTS	PR01911	PFDSPHPHTASE	coord: 41..58 score: 2.5E-26coord: 78..91 score: 2.5E-26coord: 97..111 score: 2.5E-26coord: 144..158 score: 2.5
None	No IPR available	PANTHER	PTHR31126	FAMILY NOT NAMED	coord: 34..104 score: 8.0E-114coord: 134..233 score: 8.0E
None	No IPR available	PANTHER	PTHR31126:SF15	SUBFAMILY NOT NAMED	coord: 34..104 score: 8.0E-114coord: 134..233 score: 8.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla016288	Cla97C09G173900	Watermelon (97103) v2	wmwmbB041
Cla016288	Csa6G421640	Cucumber (Chinese Long) v2	cuwmB445
Cla016288	MELO3C014438	Melon (DHL92) v3.5.1	mewmB391
Cla016288	ClCG09G011180	Watermelon (Charleston Gray)	wcgwmB007
Cla016288	CSPI06G22660	Wild cucumber (PI 183967)	cpiwmB460
Cla016288	Cucsa.185130	Cucumber (Gy14) v1	cgywmB351
Cla016288	CmaCh11G019360	Cucurbita maxima (Rimu)	cmawmB083
Cla016288	CmaCh19G010480	Cucurbita maxima (Rimu)	cmawmB477
Cla016288	CmoCh19G010770	Cucurbita moschata (Rifu)	cmowmB470
Cla016288	CmoCh11G020160	Cucurbita moschata (Rifu)	cmowmB072
Cla016288	Lsi11G016690	Bottle gourd (USVL1VR-Ls)	lsiwmB085
Cla016288	Lsi10G015690	Bottle gourd (USVL1VR-Ls)	lsiwmB045
Cla016288	Cp4.1LG15g08470	Cucurbita pepo (Zucchini)	cpewmB241
Cla016288	Cp4.1LG04g02530	Cucurbita pepo (Zucchini)	cpewmB633
Cla016288	CsGy6G021880	Cucumber (Gy14) v2	cgybwmB417
Cla016288	MELO3C014438.2	Melon (DHL92) v3.6.1	medwmB385
Cla016288	Carg04643	Silver-seed gourd	carwmB0380
Cla016288	Carg15707	Silver-seed gourd	carwmB0527
Cla016288	CsaV3_6G037790	Cucumber (Chinese Long) v3	cucwmB471
Cla016288	Bhi05G001804	Wax gourd	wgowmB245
Cla016288	Bhi10G000801	Wax gourd	wgowmB356

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None