Cla016002 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAGATTGAGATCATCAAGTTCTAGTTCCAGTGAGACTAGTCTTAATCCATTCGGAACTAGTAGTACTACCAGTGAGACTAGTCTTAATCCATTCGGAACTAGTACTGCGATAACGAATACTACGGATCAGCCGACGACGACTATTAACGATTTGAGTTCTCAATCATCCGAGACTCTGGCCAACACTCATGGTCTTTTTGAGGATTTTCCGGGTCTTGCAGAAGGATCCGACGATGTTGAAAATTCACCCCACCTTCCGGACATGGGAGATGATCGTAACATTATTGCTTTCGATGACCCAGAAAGTCTTTTGACTGCGATCTGTGATCATTTTTCTTTCTATTTGGAAACGACCGGAACGGCCTTGCCAGCCGAATGGTCTATCCAAGAATTTTCCCGTACGGTGATTGGGGAAGAGGGGGGTCCAAAACCCCCCTCTCTAAGGTGTCCGATCTTTCGCTGCATGGTTTGCAGAGTTGGTATTGGGAGGAAGCTGTGAAGCTTCTAACTAGAATTACCAGCTCGGTAATGTGAAAGAGAACATCTTAGTCTTTACAGCAGCGGCTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCGATTAGTTTACAAGATTGA ATGTTGAGATTGAGATCATCAAGTTCTAGTTCCAGTGAGACTAGTCTTAATCCATTCGGAACTAGTAGTACTACCAGTGAGACTAGTCTTAATCCATTCGGAACTAGTACTGCGATAACGAATACTACGGATCAGCCGACGACGACTATTAACGATTTGAGTTCTCAATCATCCGAGACTCTGGCCAACACTCATGGTCTTTTTGAGGATTTTCCGGGTCTTGCAGAAGGATCCGACGATGTTGAAAATTCACCCCACCTTCCGGACATGGGAGATGATCGTAACATTATTGCTTTCGATGACCCAGAAAGTCTTTTGACTGCGATCTGTGATCATTTTTCTTTCTATTTGGAAACGACCGGAACGGCCTTGCCAGCCGAATGGTCTATCCAAGAATTTTCCCGTACGCTCGGTAATGTGAAAGAGAACATCTTAGTCTTTACAGCAGCGGCTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCGATTAGTTTACAAGATTGA ATGTTGAGATTGAGATCATCAAGTTCTAGTTCCAGTGAGACTAGTCTTAATCCATTCGGAACTAGTAGTACTACCAGTGAGACTAGTCTTAATCCATTCGGAACTAGTACTGCGATAACGAATACTACGGATCAGCCGACGACGACTATTAACGATTTGAGTTCTCAATCATCCGAGACTCTGGCCAACACTCATGGTCTTTTTGAGGATTTTCCGGGTCTTGCAGAAGGATCCGACGATGTTGAAAATTCACCCCACCTTCCGGACATGGGAGATGATCGTAACATTATTGCTTTCGATGACCCAGAAAGTCTTTTGACTGCGATCTGTGATCATTTTTCTTTCTATTTGGAAACGACCGGAACGGCCTTGCCAGCCGAATGGTCTATCCAAGAATTTTCCCGTACGCTCGGTAATGTGAAAGAGAACATCTTAGTCTTTACAGCAGCGGCTCCCATGTTAAAACTTCCGTACCAATTCGGTCGATCCGGAATGGATCGGTTAAACATTCTATTAGGGAGCCTGGTCTTGACTCTTCTGTGTGGTATTCATTCTCGTTCGGCTCTTGGAATCACATCCAGCCGTGGTTGGAACAGCTCGCAAAATCCAACCACTTCACCTACTTCATTGCCCCCAACCGTTTCTCGTACCTCTATTGAAACAGAATGGTTTCATGTTCCTTCATCGATTGGTTATTCCTCCCCGTTCGTATCTCTTTTTCCAATTTCGGTCTCGATTAGTTTACAAGATTGA MLRLRSSSSSSSETSLNPFGTSSTTSETSLNPFGTSTAITNTTDQPTTTINDLSSQSSETLANTHGLFEDFPGLAEGSDDVENSPHLPDMGDDRNIIAFDDPESLLTAICDHFSFYLETTGTALPAEWSIQEFSRTLGNVKENILVFTAAAPMLKLPYQFGRSGMDRLNILLGSLVLTLLCGIHSRSALGITSSRGWNSSQNPTTSPTSLPPTVSRTSIETEWFHVPSSIGYSSPFVSLFPISVSISLQD
BLAST of Cla016002 vs. Swiss-Prot
Match: CCMB_ARATH (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Arabidopsis thaliana GN=CCMB PE=2 SV=2) HSP 1 Score: 149.8 bits (377), Expect = 3.9e-35 Identity = 81/99 (81.82%), Postives = 80/99 (80.81%), Query Frame = 1
BLAST of Cla016002 vs. Swiss-Prot
Match: CCMB_MARPO (Putative cytochrome c biogenesis ccmB-like mitochondrial protein OS=Marchantia polymorpha GN=CCMB PE=3 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 8.4e-22 Identity = 57/98 (58.16%), Postives = 68/98 (69.39%), Query Frame = 1
BLAST of Cla016002 vs. TrEMBL
Match: G3EIY1_CUCSA (Cytochrome c biogenesis B OS=Cucumis sativus GN=ccmB PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 8.1e-48 Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 1
BLAST of Cla016002 vs. TrEMBL
Match: G3EU22_CUCME (Cytochrome c biogenesis B OS=Cucumis melo subsp. melo GN=ccmB PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.4e-47 Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 1
BLAST of Cla016002 vs. TrEMBL
Match: E9P295_RICCO (Cytochrome c biogenesis B OS=Ricinus communis GN=ccmB PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 1.3e-45 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 1
BLAST of Cla016002 vs. TrEMBL
Match: A0A0M5LAV9_9MAGN (Cytochrome c maturation protein CcmB OS=Heuchera parviflora var. saurensis GN=ccmB PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 2.9e-45 Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 1
BLAST of Cla016002 vs. TrEMBL
Match: A0A142BZ22_ZIZJJ (Cytochrome c biogenesis B OS=Ziziphus jujuba GN=ccmB PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.1e-44 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 1
BLAST of Cla016002 vs. NCBI nr
Match: gi|346683367|ref|YP_004849329.1| (cytochrome c biogenesis B [Cucumis sativus]) HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47 Identity = 97/99 (97.98%), Postives = 99/99 (100.00%), Query Frame = 1
BLAST of Cla016002 vs. NCBI nr
Match: gi|345034420|gb|AEN56106.1| (cytochrome c biogenesis B [Cucumis melo subsp. melo]) HSP 1 Score: 197.2 bits (500), Expect = 3.4e-47 Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 1
BLAST of Cla016002 vs. NCBI nr
Match: gi|323649884|ref|YP_004237257.1| (cytochrome c biogenesis B (mitochondrion) [Ricinus communis]) HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45 Identity = 95/99 (95.96%), Postives = 96/99 (96.97%), Query Frame = 1
BLAST of Cla016002 vs. NCBI nr
Match: gi|927682203|gb|ALE29215.1| (cytochrome c maturation protein CcmB (mitochondrion) [Heuchera parviflora var. saurensis]) HSP 1 Score: 190.3 bits (482), Expect = 4.1e-45 Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 1
BLAST of Cla016002 vs. NCBI nr
Match: gi|1016470822|ref|YP_009241681.1| (cytochrome c biogenesis B (mitochondrion) [Ziziphus jujuba]) HSP 1 Score: 188.3 bits (477), Expect = 1.6e-44 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |