Cla015935 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGAAGCGCCGCGACACCGCAAATTTACCCCCCAATACCACCGATTCTCCCTCATCGGAGCCGCCTTCTTCTCGCCGTCGTGCTGGAGCTCAGAAGCGAAAGGCTAGCTCTCTTGGTGGCTCTAACTCCTCATCCGGGCCCTCGAAACGCGTTACTCGCGACAAATCTGCGCTTTCGCATCCTCCAAATCATAACGGCCCCTTCACCAGAGCTCGACTTGGCCCTAACAATGGCGCTGGGGCAGCATCGGCTAACGCGGCTGGAGGTCTCGCCGCCGGATCAGTTAAGGCGGAGGGCTCTTTACTTCATTCCGAAGTTCAGCGTGGAGATGCGTTGGTCGCTGCGGCGGAAGAATTGAATAAGGCGAGTAGATTGGCTAATTTGGAGGCGTCTTTCGAAGCTGATTTCGAAGCTATTAAATCTCGAGGTGCAAATGTTCATGTCGTTCCGAATCATTGTGGTGAGTTTCGGTTTTACTCTTTTGCGAGATCCTGA ATGGAGGAGAAGCGCCGCGACACCGCAAATTTACCCCCCAATACCACCGATTCTCCCTCATCGGAGCCGCCTTCTTCTCGCCGTCGTGCTGGAGCTCAGAAGCGAAAGGCTAGCTCTCTTGGTGGCTCTAACTCCTCATCCGGGCCCTCGAAACGCGTTACTCGCGACAAATCTGCGCTTTCGCATCCTCCAAATCATAACGGCCCCTTCACCAGAGCTCGACTTGGCCCTAACAATGGCGCTGGGGCAGCATCGGCTAACGCGGCTGGAGGTCTCGCCGCCGGATCAGTTAAGGCGGAGGGCTCTTTACTTCATTCCGAAGTTCAGCGTGGAGATGCGTTGGTCGCTGCGGCGGAAGAATTGAATAAGGCGAGTAGATTGGCTAATTTGGAGGCGTCTTTCGAAGCTGATTTCGAAGCTATTAAATCTCGAGGTGCAAATGTTCATGTCGTTCCGAATCATTGTGGTGAGTTTCGGTTTTACTCTTTTGCGAGATCCTGA ATGGAGGAGAAGCGCCGCGACACCGCAAATTTACCCCCCAATACCACCGATTCTCCCTCATCGGAGCCGCCTTCTTCTCGCCGTCGTGCTGGAGCTCAGAAGCGAAAGGCTAGCTCTCTTGGTGGCTCTAACTCCTCATCCGGGCCCTCGAAACGCGTTACTCGCGACAAATCTGCGCTTTCGCATCCTCCAAATCATAACGGCCCCTTCACCAGAGCTCGACTTGGCCCTAACAATGGCGCTGGGGCAGCATCGGCTAACGCGGCTGGAGGTCTCGCCGCCGGATCAGTTAAGGCGGAGGGCTCTTTACTTCATTCCGAAGTTCAGCGTGGAGATGCGTTGGTCGCTGCGGCGGAAGAATTGAATAAGGCGAGTAGATTGGCTAATTTGGAGGCGTCTTTCGAAGCTGATTTCGAAGCTATTAAATCTCGAGGTGCAAATGTTCATGTCGTTCCGAATCATTGTGGTGAGTTTCGGTTTTACTCTTTTGCGAGATCCTGA MEEKRRDTANLPPNTTDSPSSEPPSSRRRAGAQKRKASSLGGSNSSSGPSKRVTRDKSALSHPPNHNGPFTRARLGPNNGAGAASANAAGGLAAGSVKAEGSLLHSEVQRGDALVAAAEELNKASRLANLEASFEADFEAIKSRGANVHVVPNHCGEFRFYSFARS
BLAST of Cla015935 vs. Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3) HSP 1 Score: 119.4 bits (298), Expect = 3.7e-26 Identity = 85/166 (51.20%), Postives = 99/166 (59.64%), Query Frame = 1
BLAST of Cla015935 vs. TrEMBL
Match: A0A0A0K5Y5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G267920 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.1e-69 Identity = 137/158 (86.71%), Postives = 146/158 (92.41%), Query Frame = 1
BLAST of Cla015935 vs. TrEMBL
Match: M5VJC1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000770mg PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 8.1e-36 Identity = 90/160 (56.25%), Postives = 111/160 (69.38%), Query Frame = 1
BLAST of Cla015935 vs. TrEMBL
Match: A0A0S3SDJ9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G221100 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.2e-35 Identity = 90/161 (55.90%), Postives = 106/161 (65.84%), Query Frame = 1
BLAST of Cla015935 vs. TrEMBL
Match: A0A0L9V7H3_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g171400 PE=4 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 5.2e-35 Identity = 90/161 (55.90%), Postives = 106/161 (65.84%), Query Frame = 1
BLAST of Cla015935 vs. TrEMBL
Match: W9R169_9ROSA (SWI/SNF complex subunit SWI3D OS=Morus notabilis GN=L484_026920 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 3.4e-34 Identity = 87/167 (52.10%), Postives = 104/167 (62.28%), Query Frame = 1
BLAST of Cla015935 vs. NCBI nr
Match: gi|659092382|ref|XP_008447039.1| (PREDICTED: SWI/SNF complex subunit SWI3D [Cucumis melo]) HSP 1 Score: 275.8 bits (704), Expect = 5.0e-71 Identity = 139/158 (87.97%), Postives = 146/158 (92.41%), Query Frame = 1
BLAST of Cla015935 vs. NCBI nr
Match: gi|449465389|ref|XP_004150410.1| (PREDICTED: SWI/SNF complex subunit SWI3D [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 1.6e-69 Identity = 137/158 (86.71%), Postives = 146/158 (92.41%), Query Frame = 1
BLAST of Cla015935 vs. NCBI nr
Match: gi|700189111|gb|KGN44344.1| (hypothetical protein Csa_7G267920 [Cucumis sativus]) HSP 1 Score: 270.8 bits (691), Expect = 1.6e-69 Identity = 137/158 (86.71%), Postives = 146/158 (92.41%), Query Frame = 1
BLAST of Cla015935 vs. NCBI nr
Match: gi|1021488093|ref|XP_016187016.1| (PREDICTED: SWI/SNF complex subunit SWI3D [Arachis ipaensis]) HSP 1 Score: 167.5 bits (423), Expect = 1.9e-38 Identity = 98/163 (60.12%), Postives = 115/163 (70.55%), Query Frame = 1
BLAST of Cla015935 vs. NCBI nr
Match: gi|1012031012|ref|XP_015952026.1| (PREDICTED: SWI/SNF complex subunit SWI3D [Arachis duranensis]) HSP 1 Score: 167.2 bits (422), Expect = 2.5e-38 Identity = 100/163 (61.35%), Postives = 116/163 (71.17%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |