Cla015779 (gene) Watermelon (97103) v1

Overview
NameCla015779
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionExpansin-like protein (AHRD V1 ***- A1X8W3_SOLTU); contains Interpro domain(s) IPR007112 Expansin 45, endoglucanase-like
LocationChr2 : 3442521 .. 3445272 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGGTTCCTTATCTTATTCTTCGTCTTCCTCATCTCTTCTGCTACTGCTTGCGATCGTTGTATTCACCGATCCAAAGCTACTCATTATTATGGAGATTCACCTACTTCATGTAAATTTTAAAACTTTTTTTTTTAATTTCATTTTTTATAGATTATTTGCCAGATTAAGATTGTGATCACATGAATTTTCTTTTTTTTTTTTCATTTGTTTTTGATAATCCCCAAATAAAAATGATTGCACATTTAATTTATTTTGGTATGATAATTTGATGTAGATGGAGGAGCATGTGGGTATGGAGACTTGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTGCCTTCTCTCTACAAACAAGGAGCTGGTTGTGGTGCGTGTTTTCAGGTATTTATACCCATTTACTTCCCCGACGTTTGATAATTATTTAAGTCTCGTTTCGTAATTATTTCAATTTTTATTTTTAGTTTTTGAGAATTAAGCTTATTTCTTCTCAATTTCTTACATTGATTTGCATATTTCTTAGCTACCAGACTTAAATTCTTAGTCAAATTCCAAATTCCAAAAACTACTTTTTTTTTCTTAGTTTTAAAAATTTTGGCTTGGTTTTTTAGAATAATGGTTAAAAGTAAATAACAAATTAAGAAATTTAGAAGTGGAATGAATGTTTACAGGCTTAGTTTTTTTATTTTAAAAAAAAAACCAAATGGTTACTAAATAGAGCTTAGTTTTTAAATTTTAAAACTATTAAGCATACAAATATTATTTCCACCTATTAATTTCCTTATTTTGTTGTTTATATCTTAAAAGTGTTTCCAAATCTAAGCTCAAGTTTTGAAAAGTAAAAAAGAAAGTTTATAAACATTTATTTTTTATTTTTATAATTTGGCTAAGAATTCCAATGTGTATTTAGTAAAGATGAAAATCATGATTATATTAAGAAATTGGGAGAAAAATACAAACATAATTTTCAATAATCAAATGGCTATTAAACAGGTCCTTAATTTTTAAAATTTTCATTTTTCATCTTTTTGGCCGACTTTTTTCTATTTTTGAAAATTTGTGAGTAATTGTTTTAAATAACAAAATACTAAAAATATTTTCAAATATAACATATCATTGTCTATCAGTGTCTGACAGTGATATTTTGCTATATTTGTAAATATTTTGACTTATTTTGTTATTATTTAAAAATAGTCTAAAATTTGTGTTATTGTAAATGTATTATTTGCTTTGTAGGTAAGATGTAAAGACAAAAGACTATGCAATACAGCAGGGACCAAAGTAGTGTTGACAGATCAAAATTATGATACAAGAGCAGATTTTGTTCTAAGTAGAAAGGCTTTTTCAGCCATGGCTTTGAAAGGAAAAGATCAACAACTTTTGAATACTGGGATTGTTGATGTAGAATACAAGAGGTGAATTATATTTTTATTACAATAACTTTACCACTAATCATAATGTATATATGAAATAATTTAACAAAATCAGCTCATTAATTGTGGGTTTTTTTTTTTTTTTCCCTTTTTCCTGATATTATTATAGGATACCTTGTGGATACAAAAACAAAAATTTGGCCGTACGAGTTGAAGAATCAAGTTATAATCCAAATTATTTAGCCATTAAACTTTTGTACCAAGGTGGCCAAACAGAGATAGTGGCTGTCGAGATAGCCGAGGTAAACTAAAAATCACTTCGTAAAAAAAAATGTTTGACGAGTAATTTTGAAATGATTAAATTTTTTTTTATCACGTTAAAAACATGTCATTAATTATTCAAAATTTTAATGTTTGAGTTTTCAATTTTAAATATAATTTTTTTACCATTAAAATTGATTTTGAATTATTAAAAACAAGTTTTAATATGGTTTGATAATTACGAGAGGTGTAATGCATTTATTTTATAAAAATTGTGAGGTCATCTTTTCCACGTCAACATTATCCTTCAAGATGGAGTGAATACTCTTTTAGTTTTTTGGACTTTGTTATCATATTCTTAAAACCAATTGAAAATGAAAAAGATGTAACTCATGTTTTGTATTATTCTTTATTCTTTGGTCGTCATATTCCAATTCTAAACCAAATACTCATTTAGGGTTTCATGCGTTCTGATATCAAGTTTGGATTCACCATTCTTTGGTTGGATTCCAATTTTTAATTAAATACCAGTTTGTTTTTTATGGACTTTGATATCATATTCTCAAAACCAATTGATAAATTAAGAAATAAAAGTAACCCATGTTTAGATTCACCATTTTTTGGTCGGTTGTCATAATTTTGAAATGAATAGCGGTTTGAGTTTCTCGGGCTCTAATATCTTATTTATCTTATAAAAGAATAAAGATTATGGAGTGTCCACGTATGGATCTTAATGTGTTTTTAAATTTGACAAAACTAAATTATAACCATTTTAAAACTACTCTCAAACATATACTCGAAACCGAAAAGGTGAATAGAGAACTAAGAAGATGTTGGTTTGGTCTATTAATGAACAGGTTGGTTCATACGAATGGGTGAGCTTAAGGAGAAACTATGGAGCAGTTTGGGATACAAATAAAGTACCCAAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGTTGATTGGAAAATTGGAGCCATTTACGATACTGGAGTTCAGATTTATGATATTGCTAAAGAGGGTTGCCTTGCATCACAGTGTGGTGATAAACCATGGAAATAA

mRNA sequence

ATGGCTTGGTTCCTTATCTTATTCTTCGTCTTCCTCATCTCTTCTGCTACTGCTTGCGATCGTTGTATTCACCGATCCAAAGCTACTCATTATTATGGAGATTCACCTACTTCATATGGAGGAGCATGTGGGTATGGAGACTTGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTGCCTTCTCTCTACAAACAAGGAGCTGGTTGTGGTGCGTGTTTTCAGGTAAGATGTAAAGACAAAAGACTATGCAATACAGCAGGGACCAAAGTAGTGTTGACAGATCAAAATTATGATACAAGAGCAGATTTTGTTCTAAGTAGAAAGGCTTTTTCAGCCATGGCTTTGAAAGGAAAAGATCAACAACTTTTGAATACTGGGATTGTTGATGTAGAATACAAGAGGATACCTTGTGGATACAAAAACAAAAATTTGGCCGTACGAGTTGAAGAATCAAGTTATAATCCAAATTATTTAGCCATTAAACTTTTGTACCAAGGTGGCCAAACAGAGATAGTGGCTGTCGAGATAGCCGAGGTTGGTTCATACGAATGGGTGAGCTTAAGGAGAAACTATGGAGCAGTTTGGGATACAAATAAAGTACCCAAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGTTGATTGGAAAATTGGAGCCATTTACGATACTGGAGTTCAGATTTATGATATTGCTAAAGAGGGTTGCCTTGCATCACAGTGTGGTGATAAACCATGGAAATAA

Coding sequence (CDS)

ATGGCTTGGTTCCTTATCTTATTCTTCGTCTTCCTCATCTCTTCTGCTACTGCTTGCGATCGTTGTATTCACCGATCCAAAGCTACTCATTATTATGGAGATTCACCTACTTCATATGGAGGAGCATGTGGGTATGGAGACTTGGCATTGGAATTTACCAATGGCTACTTTTCAGCTGCTGTGCCTTCTCTCTACAAACAAGGAGCTGGTTGTGGTGCGTGTTTTCAGGTAAGATGTAAAGACAAAAGACTATGCAATACAGCAGGGACCAAAGTAGTGTTGACAGATCAAAATTATGATACAAGAGCAGATTTTGTTCTAAGTAGAAAGGCTTTTTCAGCCATGGCTTTGAAAGGAAAAGATCAACAACTTTTGAATACTGGGATTGTTGATGTAGAATACAAGAGGATACCTTGTGGATACAAAAACAAAAATTTGGCCGTACGAGTTGAAGAATCAAGTTATAATCCAAATTATTTAGCCATTAAACTTTTGTACCAAGGTGGCCAAACAGAGATAGTGGCTGTCGAGATAGCCGAGGTTGGTTCATACGAATGGGTGAGCTTAAGGAGAAACTATGGAGCAGTTTGGGATACAAATAAAGTACCCAAAGGAGCATTACAAATGAGAATGGCATTTACTTCAGGATACGATGGAAAATGGGTTTGGGCAGAATATGTTCTTCCTGTTGATTGGAAAATTGGAGCCATTTACGATACTGGAGTTCAGATTTATGATATTGCTAAAGAGGGTTGCCTTGCATCACAGTGTGGTGATAAACCATGGAAATAA

Protein sequence

MAWFLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKDQQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEVGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTGVQIYDIAKEGCLASQCGDKPWK
Homology
[Close]
BLAST of Cla015779 vs. Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 7.6e-82
Identity = 152/263 (57.79%), Postives = 186/263 (70.72%), Query Frame = 1 

Query: 4   FLILFFVFLI--SSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAV 63
           FL L  V L+  SSA ACDRC+H SKA ++   S  S  GAC YG +A  F  G+ +AA+
Sbjct: 5   FLFLLSVVLLFSSSAAACDRCLHSSKAAYFSSASALS-SGACAYGSMATGFFAGHIAAAL 64

Query: 64  PSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMA--LKG 123
           PS+YK G+GCGACFQVRCK+  LC++ GT V++TD N   + D VLS +AF AMA  + G
Sbjct: 65  PSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVG 124

Query: 124 KDQQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIA 183
            D+ LL  GIVD+EY+R+PC Y NK + VRVEESS NPNYLAIKLLYQGGQTE+VA+ IA
Sbjct: 125 ADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIA 184

Query: 184 EVGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYD 243
           +VGS  W  + R++GAVW T+KVP GALQ R   T+GYDGK VW++ VLP +W+ G  YD
Sbjct: 185 QVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAGKSYD 244

Query: 244 TGVQIYDIAKEGCLASQCGDKPW 263
            GVQI DIA+EGC    C D  W
Sbjct: 245 AGVQITDIAQEGC--DPCDDHIW 264

[Close]
BLAST of Cla015779 vs. Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 3.8e-81
Identity = 148/257 (57.59%), Postives = 183/257 (71.21%), Query Frame = 1 

Query: 4   FLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPS 63
           +LI+      SS  ACDRC+HRSKA+++   S  S  GAC YG +A  F  G+ +AA+PS
Sbjct: 6   YLIVVIFLFSSSVNACDRCLHRSKASYFSSASALS-SGACAYGPMATSFFAGHIAAAIPS 65

Query: 64  LYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMA--LKGKD 123
           +YK GAGCGACFQVRCK+ +LCN+ GT V++TD N   + D VLS +AF AMA  + G D
Sbjct: 66  IYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVD 125

Query: 124 QQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEV 183
           + LL  GIVDVEY+R+PC Y  +NL VRVEE+S  PNYLAIKLLYQGGQTE+V ++IA V
Sbjct: 126 KYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPV 185

Query: 184 GSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTG 243
           GS +W  + R++GAVW T+KVP GALQ +   T GYDGK VW++ VLP +W  G IYD G
Sbjct: 186 GSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSGRIYDAG 245

Query: 244 VQIYDIAKEGCLASQCG 259
           VQI DIA+EGC    CG
Sbjct: 246 VQITDIAQEGC--DTCG 259

[Close]
BLAST of Cla015779 vs. Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.4e-80
Identity = 145/252 (57.54%), Postives = 182/252 (72.22%), Query Frame = 1 

Query: 4   FLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPS 63
           FLI+      SS  ACDRC+HRSKA ++   S  S  GAC YG +A  F  G+ +AA+PS
Sbjct: 6   FLIVVIFLFSSSVNACDRCLHRSKAAYFSSASALS-SGACAYGSMATSFFAGHIAAAIPS 65

Query: 64  LYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMA--LKGKD 123
           +YK GAGCGACFQVRCK+ +LC+T GT V++TD N   + D VLS +AF AMA  + G D
Sbjct: 66  IYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGAD 125

Query: 124 QQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEV 183
           + LL  GIVD+EY+R+PC Y NKN+ VRVEE+S  PNYL IKLLYQGGQTE+V+++IA+V
Sbjct: 126 KDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQV 185

Query: 184 GSY-EWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDT 243
           GS   W  + R++GAVW T+KVP GA+Q R   T GYDGK +W++ VLP +W+ G IYD 
Sbjct: 186 GSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAGKIYDA 245

Query: 244 GVQIYDIAKEGC 253
           GVQI DIA+EGC
Sbjct: 246 GVQITDIAQEGC 256

[Close]
BLAST of Cla015779 vs. Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-71
Identity = 138/263 (52.47%), Postives = 170/263 (64.64%), Query Frame = 1 

Query: 5   LILFFVFLISS--ATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAV- 64
           L+L  V L++   A+ CDRC+ RS+A  YY  S T   G+CGYG  A  F  G F AA  
Sbjct: 20  LLLVIVALLAPRLASGCDRCVRRSRAA-YYTSSLTLTAGSCGYGTAAATFNGGGFLAAAG 79

Query: 65  PSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKD 124
           P+LY+ G GCGAC+QVRCKDK+LC+ AG +VV+TD+    R   VLS  AF+AMA  G  
Sbjct: 80  PALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMA 139

Query: 125 QQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEV 184
             L     VDVEYKR+PC Y++++L+VRV+E S  PN L I  LYQGGQT+IVAV++A+V
Sbjct: 140 ASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQV 199

Query: 185 GSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAE-YVLPVDWKIGAIYDT 244
           GS  W  + R +G  W     P G LQMR+  T GYDGKWVWA+  VLP  W+ G +YDT
Sbjct: 200 GSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAGEVYDT 259

Query: 245 GVQIYDIAKEGCLASQCGDKPWK 264
           GVQI DIA+EGC    C    WK
Sbjct: 260 GVQITDIAQEGCF--PCDTHEWK 279

[Close]
BLAST of Cla015779 vs. Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 6.0e-71
Identity = 139/265 (52.45%), Postives = 173/265 (65.28%), Query Frame = 1 

Query: 5   LILFFVFLISSAT---ACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAV 64
           ++LFFV +  SA+    CDRC+ RSKA  +   S     G+CGYG LA  F  G+ +AA 
Sbjct: 14  VVLFFVVVGMSASMVSGCDRCVRRSKAG-FRDSSIALNAGSCGYGSLAASFNGGHLAAAS 73

Query: 65  PSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDT-RADFVLSRKAFSAMALKGK 124
           P+L++ G GCGACFQVRCKD +LC+TAG KVV+TD+   T R D VLS  A++AMA  G 
Sbjct: 74  PALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGM 133

Query: 125 DQQLLNTGIVDVEYKRIPCGYK-NKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIA 184
             QL     VDVEYKR+PC Y   +NL++RVEE S  P  L+I+ LYQGGQT+IVAV++A
Sbjct: 134 AAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVA 193

Query: 185 EVGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAE-YVLPVDWKIGAIY 244
            VGS  W  + R+YG  W T + P G LQ R+  T GYDGKWVWA+  VLP  W  G +Y
Sbjct: 194 TVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAGRVY 253

Query: 245 DTGVQIYDIAKEGCLASQCGDKPWK 264
           D GVQI D+A+EGC    C  + WK
Sbjct: 254 DAGVQIADVAQEGCY--PCDTQEWK 275

[Close]
BLAST of Cla015779 vs. TrEMBL
Match: A0A0D2NI99_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G257500 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.9e-95
Identity = 169/259 (65.25%), Postives = 205/259 (79.15%), Query Frame = 1 

Query: 4   FLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPS 63
           FL +    ++SSATACDRC+H+SKA+ Y+ D+  S  GACGYG LAL  + G+ +A V S
Sbjct: 6   FLCMLLFLVLSSATACDRCVHQSKAS-YFSDAAAS-SGACGYGSLALTISGGHLAAGVSS 65

Query: 64  LYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKDQQ 123
           L+KQGAGCGACFQ+RCKD +LC++ GTKV LTD N++ + DFVL+ +AF AMA KGK Q 
Sbjct: 66  LHKQGAGCGACFQIRCKDSKLCSSKGTKVTLTDLNHNNQTDFVLTSRAFMAMANKGKGQD 125

Query: 124 LLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEVGS 183
           +L  GIVDVEYKR+PC YKN+NLA+RVEESS  P YLAIKLLYQGGQTEIVA+++A+VGS
Sbjct: 126 VLKLGIVDVEYKRMPCEYKNQNLAIRVEESSQKPYYLAIKLLYQGGQTEIVAIDVAQVGS 185

Query: 184 YEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTGVQ 243
             W+ + RNYGAVWDT++VP GALQ R   TSGYDGKWVWA+ VLP DWKIG IYD+GVQ
Sbjct: 186 SNWIFMTRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWVWAKNVLPADWKIGVIYDSGVQ 245

Query: 244 IYDIAKEGCLASQCGDKPW 263
           I DIA+EGC  S C D  W
Sbjct: 246 ITDIAQEGC--SPCDDGNW 260

[Close]
BLAST of Cla015779 vs. TrEMBL
Match: A0A067FLN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024895mg PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.1e-95
Identity = 161/258 (62.40%), Postives = 200/258 (77.52%), Query Frame = 1 

Query: 6   ILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPSLY 65
           + F  FL SSATACDRC+H++K   Y+  +     GACGYG LAL F  G+ +A VPSLY
Sbjct: 5   LCFLFFLFSSATACDRCVHQTKVA-YFSQASALSSGACGYGSLALSFNGGHLAAGVPSLY 64

Query: 66  KQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKDQQLL 125
           K GAGCGACFQ+RCK+  LC+  GT+V+LTD N+  + DFV+S +AF A++ +GK Q +L
Sbjct: 65  KDGAGCGACFQMRCKNPTLCSGRGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDIL 124

Query: 126 NTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEVGSYE 185
             G+VDVEYKR+PC YKN+NLAVRVEESS  PNYLA+K+LYQGGQTE+VA+++A+VGS  
Sbjct: 125 KLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSN 184

Query: 186 WVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTGVQIY 245
           W  + RNYGAVWDT++VP GALQ R   TSGYDGKW+WA+ VLP DWK G IY++GVQI 
Sbjct: 185 WGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQIT 244

Query: 246 DIAKEGCLASQCGDKPWK 264
           DIAKEGC  S+CGD  WK
Sbjct: 245 DIAKEGCSESECGDGSWK 261

[Close]
BLAST of Cla015779 vs. TrEMBL
Match: V4SA67_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029088mg PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.1e-95
Identity = 161/258 (62.40%), Postives = 200/258 (77.52%), Query Frame = 1 

Query: 6   ILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPSLY 65
           + F  FL SSATACDRC+H++K   Y+  +     GACGYG LAL F  G+ +A VPSLY
Sbjct: 5   LCFLFFLFSSATACDRCVHQTKVA-YFSQASALSSGACGYGSLALSFNGGHLAAGVPSLY 64

Query: 66  KQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKDQQLL 125
           K GAGCGACFQ+RCK+  LC+  GT+V+LTD N+  + DFV+S +AF A++ +GK Q +L
Sbjct: 65  KDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTDFVISSRAFMALSNQGKGQDIL 124

Query: 126 NTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEVGSYE 185
             G+VDVEYKR+PC YKN+NLAVRVEESS  PNYLA+K+LYQGGQTE+VA+++A+VGS  
Sbjct: 125 KLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSN 184

Query: 186 WVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTGVQIY 245
           W  + RNYGAVWDT++VP GALQ R   TSGYDGKW+WA+ VLP DWK G IY++GVQI 
Sbjct: 185 WGYMSRNYGAVWDTSRVPNGALQFRFVVTSGYDGKWIWAKNVLPADWKPGMIYNSGVQIT 244

Query: 246 DIAKEGCLASQCGDKPWK 264
           DIAKEGC  S+CGD  WK
Sbjct: 245 DIAKEGCSESECGDGSWK 261

[Close]
BLAST of Cla015779 vs. TrEMBL
Match: A0A067KZN6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03948 PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 7.1e-95
Identity = 167/260 (64.23%), Postives = 202/260 (77.69%), Query Frame = 1 

Query: 4   FLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPS 63
           FL +FF FLISS TACDRC+H+SKA  Y+  S   Y GACGYG LA+ F  G+ +AAVP+
Sbjct: 4   FLCIFF-FLISSTTACDRCVHQSKAA-YFSKSSALYSGACGYGSLAIGFNGGHLAAAVPT 63

Query: 64  LYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKDQQ 123
           LYK GAGCGACF++RCKD  LC++ GT V++TD N +   DFVLS +AF AMA  G  + 
Sbjct: 64  LYKDGAGCGACFKLRCKDSSLCSSKGTTVMVTDLNQNNNTDFVLSGRAFMAMANNGMGKD 123

Query: 124 LLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEVGS 183
           LL  GIVD+EYKR+PC +KNKNLAVRVEESS  PNYLAIKLLYQGGQTE+VA+++A+VGS
Sbjct: 124 LLKHGIVDIEYKRVPCEFKNKNLAVRVEESSQYPNYLAIKLLYQGGQTEVVAIDVAKVGS 183

Query: 184 YEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTGVQ 243
             W  + RNYGAVWDT++VP GALQ R   T+GYDGKW+WA+ VLP DWK+G +YD+GVQ
Sbjct: 184 SNWGYMSRNYGAVWDTSRVPAGALQFRFVVTAGYDGKWIWAQNVLPADWKVGTVYDSGVQ 243

Query: 244 IYDIAKEGCLASQCGDKPWK 264
           I DIA+EGC  S C D  WK
Sbjct: 244 ITDIAQEGC--SPCDDGSWK 259

[Close]
BLAST of Cla015779 vs. TrEMBL
Match: A0A0B0P1I4_GOSAR (Expansin-like A1 OS=Gossypium arboreum GN=F383_05840 PE=3 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 2.1e-94
Identity = 168/259 (64.86%), Postives = 202/259 (77.99%), Query Frame = 1 

Query: 4   FLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAAVPS 63
           FL +    ++SSA ACDRC+H+SKA+ Y+ D+  S  GACGYG LAL  + G+ +A V S
Sbjct: 6   FLCMLLFLVLSSANACDRCVHQSKAS-YFSDAAAS-SGACGYGSLALTISGGHLAAGVSS 65

Query: 64  LYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGKDQQ 123
           LYKQGAGCGACFQ+RCKD +LC++ GTKV LTD N++ + DFVL+ +AF AMA KGK Q 
Sbjct: 66  LYKQGAGCGACFQIRCKDSKLCSSKGTKVTLTDLNHNNQTDFVLTSRAFMAMANKGKGQD 125

Query: 124 LLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAEVGS 183
           +L  GIVDVEYKRIPC YKN+NLA+RVEESS+ P YLAIKLLYQGGQTEIVA+++A+VGS
Sbjct: 126 VLKLGIVDVEYKRIPCEYKNQNLAIRVEESSHKPYYLAIKLLYQGGQTEIVAIDVAQVGS 185

Query: 184 YEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDTGVQ 243
             W  + RNYGAVWD ++VP GALQ R   TSGYDGKWVWA+ VLP DWKIG  YD+GVQ
Sbjct: 186 SNWSFMTRNYGAVWDASRVPNGALQFRFVVTSGYDGKWVWAKNVLPADWKIGVTYDSGVQ 245

Query: 244 IYDIAKEGCLASQCGDKPW 263
           I DIA+EGC  S C D  W
Sbjct: 246 ITDIAQEGC--SPCDDGNW 260

[Close]
BLAST of Cla015779 vs. NCBI nr
Match: gi|449454267|ref|XP_004144877.1| (PREDICTED: expansin-like A3 [Cucumis sativus])

HSP 1 Score: 523.9 bits (1348), Expect = 1.7e-145
Identity = 246/263 (93.54%), Postives = 254/263 (96.58%), Query Frame = 1 

Query: 1   MAWFLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAA 60
           MAWFL LFF FL+S   ACDRCIHRSKATHYYGDSPTSYGGACGYGD+ALEFTNGYFSAA
Sbjct: 1   MAWFLSLFFFFLVSFTNACDRCIHRSKATHYYGDSPTSYGGACGYGDMALEFTNGYFSAA 60

Query: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGK 120
           VPSLYKQGAGCGACFQVRCKDKRLCNTAG+KVVLTDQNYD+RADFVLSRKAFSAMALKGK
Sbjct: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGSKVVLTDQNYDSRADFVLSRKAFSAMALKGK 120

Query: 121 DQQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAE 180
            Q+LLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLA+KLLYQGGQTEIVAVEIAE
Sbjct: 121 GQELLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAVKLLYQGGQTEIVAVEIAE 180

Query: 181 VGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDT 240
           VGSYEWVSLRRNYGAVWDT+KVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWK+GAIYDT
Sbjct: 181 VGSYEWVSLRRNYGAVWDTSKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKVGAIYDT 240

Query: 241 GVQIYDIAKEGCLASQCGDKPWK 264
           GVQIYDIAKE C  SQCGDKPWK
Sbjct: 241 GVQIYDIAKESCPTSQCGDKPWK 263

[Close]
BLAST of Cla015779 vs. NCBI nr
Match: gi|659094108|ref|XP_008447888.1| (PREDICTED: expansin-like A3 isoform X3 [Cucumis melo])

HSP 1 Score: 521.5 bits (1342), Expect = 8.3e-145
Identity = 245/263 (93.16%), Postives = 254/263 (96.58%), Query Frame = 1 

Query: 1   MAWFLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAA 60
           MAWFL LFF FL+S A ACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFT+GYFSAA
Sbjct: 1   MAWFLSLFFFFLVSFANACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTDGYFSAA 60

Query: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGK 120
           VPSLYKQGAGCGACFQVRCKDKRLCNTAG+KVVLTDQNYD+R DFVLSRKAFSAMALKGK
Sbjct: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGSKVVLTDQNYDSRVDFVLSRKAFSAMALKGK 120

Query: 121 DQQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAE 180
            Q+LLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLA+KLLYQGGQTEIVAV+IAE
Sbjct: 121 GQELLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLALKLLYQGGQTEIVAVDIAE 180

Query: 181 VGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDT 240
           VGSYEWVSLRRNYGAVWDTNKVP GALQMRMAFTSGYDGKWVWAEYVLPVDW++GAIYDT
Sbjct: 181 VGSYEWVSLRRNYGAVWDTNKVPNGALQMRMAFTSGYDGKWVWAEYVLPVDWEVGAIYDT 240

Query: 241 GVQIYDIAKEGCLASQCGDKPWK 264
           GVQIYDIAKEGC  SQCGDKPWK
Sbjct: 241 GVQIYDIAKEGCPRSQCGDKPWK 263

[Close]
BLAST of Cla015779 vs. NCBI nr
Match: gi|659094104|ref|XP_008447886.1| (PREDICTED: expansin-like A1 isoform X1 [Cucumis melo])

HSP 1 Score: 422.2 bits (1084), Expect = 6.8e-115
Identity = 197/264 (74.62%), Postives = 225/264 (85.23%), Query Frame = 1 

Query: 1   MAWFLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAA 60
           MAWFL LFF FL+S A ACDRCIHRSKATHYYGDSPTSYGGACGYG+LAL+F+NG+F+AA
Sbjct: 1   MAWFLSLFFFFLVSFANACDRCIHRSKATHYYGDSPTSYGGACGYGNLALQFSNGFFAAA 60

Query: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGK 120
           VPSLYKQGAGCGAC+QVRCK++RLCNT GTKVVLTDQN D   D VLS+KAF  MAL GK
Sbjct: 61  VPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQNNDNVTDLVLSQKAFFTMALSGK 120

Query: 121 DQQLLNTGIVDVEYKRIPCGYKN-KNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIA 180
              LLN G+VDVEYKR+PC Y N +NL VRVEESSYNP  LAIK LYQGGQTE+VAV+IA
Sbjct: 121 GSDLLNLGVVDVEYKRVPCEYPNYRNLLVRVEESSYNPFKLAIKFLYQGGQTEMVAVDIA 180

Query: 181 EVGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYD 240
           +VG+ +W  ++R+YGAVW+T+ VP+GALQ+RM  TSGYDGKWVWA+ VLP +W+ GAIYD
Sbjct: 181 QVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWRAGAIYD 240

Query: 241 TGVQIYDIAKEGCLASQCGDKPWK 264
           TGVQI DIAKE C   QCGD PWK
Sbjct: 241 TGVQIKDIAKESCPPWQCGDNPWK 264

[Close]
BLAST of Cla015779 vs. NCBI nr
Match: gi|659094116|ref|XP_008447892.1| (PREDICTED: expansin-like A2 [Cucumis melo])

HSP 1 Score: 403.7 bits (1036), Expect = 2.5e-109
Identity = 185/263 (70.34%), Postives = 221/263 (84.03%), Query Frame = 1 

Query: 1   MAWFLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAA 60
           MAWFL   F++ ISSA ACDRC+++SKA+H Y DSPT+YGGACGYG++AL+F+NGYF+AA
Sbjct: 1   MAWFLGFLFLYFISSANACDRCVYQSKASHLY-DSPTTYGGACGYGNVALQFSNGYFAAA 60

Query: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGK 120
           VPSLY+QG GCGAC+QVRCK++RLCNT GTKVVLTDQN D   D VLS++AF  MAL GK
Sbjct: 61  VPSLYRQGVGCGACYQVRCKNRRLCNTIGTKVVLTDQNNDNATDLVLSKRAFFTMALNGK 120

Query: 121 DQQLLNTGIVDVEYKRIPCGYKNKNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIAE 180
              LLN G+VDVEYKR+ C YK+KNL V+VEE SYNP YLAIK LYQGGQT++VAV+IA+
Sbjct: 121 GADLLNLGVVDVEYKRVACEYKHKNLLVQVEEFSYNPFYLAIKFLYQGGQTDMVAVDIAQ 180

Query: 181 VGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYDT 240
           VG+ EW  ++R+YGAVW+ N +P+G+LQ+RM  TSGYDGKWVWA+ VLP DWK GAIYDT
Sbjct: 181 VGTSEWSHMKRSYGAVWEINNIPEGSLQLRMVVTSGYDGKWVWAKSVLPADWKSGAIYDT 240

Query: 241 GVQIYDIAKEGCLASQCGDKPWK 264
           GVQI DIAKE C   QCGDKPWK
Sbjct: 241 GVQINDIAKESCPPWQCGDKPWK 262

[Close]
BLAST of Cla015779 vs. NCBI nr
Match: gi|659094106|ref|XP_008447887.1| (PREDICTED: expansin-like A2 isoform X2 [Cucumis melo])

HSP 1 Score: 399.8 bits (1026), Expect = 3.6e-108
Identity = 188/264 (71.21%), Postives = 221/264 (83.71%), Query Frame = 1 

Query: 1   MAWFLILFFVFLISSATACDRCIHRSKATHYYGDSPTSYGGACGYGDLALEFTNGYFSAA 60
           MAWFL   F+F ISSA ACDRC+ +SKA+H Y +SPT+YGGACGYG+LAL+F+NG+F+AA
Sbjct: 1   MAWFLSFLFLFFISSAHACDRCVFQSKASHLY-ESPTTYGGACGYGNLALQFSNGFFAAA 60

Query: 61  VPSLYKQGAGCGACFQVRCKDKRLCNTAGTKVVLTDQNYDTRADFVLSRKAFSAMALKGK 120
           VPSLYKQGAGCGAC+QVRCK++RLCNT GTKVVLTDQN D   D VLS+KAF  MAL GK
Sbjct: 61  VPSLYKQGAGCGACYQVRCKNRRLCNTVGTKVVLTDQNNDNVTDLVLSQKAFFTMALSGK 120

Query: 121 DQQLLNTGIVDVEYKRIPCGYKN-KNLAVRVEESSYNPNYLAIKLLYQGGQTEIVAVEIA 180
              LLN G+VDVEYKR+PC Y N +NL VRVEESSYNP  LAIK LYQGGQTE+VAV+IA
Sbjct: 121 GSDLLNLGVVDVEYKRVPCEYPNYRNLLVRVEESSYNPFKLAIKFLYQGGQTEMVAVDIA 180

Query: 181 EVGSYEWVSLRRNYGAVWDTNKVPKGALQMRMAFTSGYDGKWVWAEYVLPVDWKIGAIYD 240
           +VG+ +W  ++R+YGAVW+T+ VP+GALQ+RM  TSGYDGKWVWA+ VLP +W+ GAIYD
Sbjct: 181 QVGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGYDGKWVWAKSVLPANWRAGAIYD 240

Query: 241 TGVQIYDIAKEGCLASQCGDKPWK 264
           TGVQI DIAKE C   QCGD PWK
Sbjct: 241 TGVQIKDIAKESCPPWQCGDNPWK 263

The following BLAST results are available for this feature:
BLAST of Cla015779 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EXLA2_ARATH7.6e-8257.79Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1[more]
EXLA3_ARATH3.8e-8157.59Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1[more]
EXLA1_ARATH1.4e-8057.54Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1[more]
EXLA1_ORYSJ1.2e-7152.47Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1[more]
EXLA2_ORYSJ6.0e-7152.45Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1[more]
BLAST of Cla015779 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0D2NI99_GOSRA1.9e-9565.25Uncharacterized protein OS=Gossypium raimondii GN=B456_005G257500 PE=3 SV=1[more]
A0A067FLN8_CITSI7.1e-9562.40Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g024895mg PE=3 SV=1[more]
V4SA67_9ROSI7.1e-9562.40Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029088mg PE=3 SV=1[more]
A0A067KZN6_JATCU7.1e-9564.23Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03948 PE=3 SV=1[more]
A0A0B0P1I4_GOSAR2.1e-9464.86Expansin-like A1 OS=Gossypium arboreum GN=F383_05840 PE=3 SV=1[more]
BLAST of Cla015779 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454267|ref|XP_004144877.1|1.7e-14593.54PREDICTED: expansin-like A3 [Cucumis sativus][more]
gi|659094108|ref|XP_008447888.1|8.3e-14593.16PREDICTED: expansin-like A3 isoform X3 [Cucumis melo][more]
gi|659094104|ref|XP_008447886.1|6.8e-11574.62PREDICTED: expansin-like A1 isoform X1 [Cucumis melo][more]
gi|659094116|ref|XP_008447892.1|2.5e-10970.34PREDICTED: expansin-like A2 [Cucumis melo][more]
gi|659094106|ref|XP_008447887.1|3.6e-10871.21PREDICTED: expansin-like A2 isoform X2 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005795LolPI
IPR007112Expansin/allergen_DPBB_dom
IPR007117Expansin_CBD
IPR007118Expan_Lol_pI
IPR009009RlpA-like_DPBB
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Biological Process
TermDefinition
GO:0019953sexual reproduction
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019953 sexual reproduction
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU47189watermelon EST collection version 2.0transcribed_cluster
WMU47911watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015779Cla015779.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU47911WMU47911transcribed_cluster
WMU47189WMU47189transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005795Major pollen allergen Lol pIPRINTSPR00829LOLP1ALLERGNcoord: 165..180
score: 1.7E-7coord: 149..164
score: 1.7E-7coord: 216..233
score: 1.7E-7coord: 116..131
score: 1.
IPR007112Expansin/pollen allergen, DPBB domainPROFILEPS50842EXPANSIN_EG45coord: 40..144
score: 26
IPR007117Expansin, cellulose-binding-like domainGENE3DG3DSA:2.60.40.760coord: 139..244
score: 5.6
IPR007117Expansin, cellulose-binding-like domainPFAMPF01357Pollen_allerg_1coord: 147..229
score: 1.2
IPR007117Expansin, cellulose-binding-like domainPROFILEPS50843EXPANSIN_CBDcoord: 158..240
score: 19
IPR007117Expansin, cellulose-binding-like domainunknownSSF49590PHL pollen allergencoord: 144..239
score: 5.75
IPR007118Expansin/Lol pIPRINTSPR01225EXPANSNFAMLYcoord: 39..57
score: 4.4E-19coord: 61..79
score: 4.4E-19coord: 226..240
score: 4.4E-19coord: 127..143
score: 4.4E-19coord: 186..200
score: 4.4
IPR009009RlpA-like protein, double-psi beta-barrel domainGENE3DG3DSA:2.40.40.10coord: 7..138
score: 7.8
IPR009009RlpA-like protein, double-psi beta-barrel domainPFAMPF03330DPBB_1coord: 60..134
score: 1.8
IPR009009RlpA-like protein, double-psi beta-barrel domainunknownSSF50685Barwin-like endoglucanasescoord: 8..143
score: 2.55
NoneNo IPR availablePANTHERPTHR31692FAMILY NOT NAMEDcoord: 1..246
score: 2.1E
NoneNo IPR availablePANTHERPTHR31692:SF4EXPANSIN-LIKE A1-RELATEDcoord: 1..246
score: 2.1E