Cla015726 (gene) Watermelon (97103) v1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTTATAGCAACTCCTCCGTCGCCGACAATTCTCAGTCCGCCGTTCAATTTACCGAGCTATGGCGGGAAAGCATCCTGCCTACGACTAGGCAGCGCGGAGGGATATCGGAGAGTGACTATGAGAGGCGGAAGTGAAAACCGGAAGCCATTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAGTCGTTGAAGCGAGCCAAGAAAGATTTACAACAATTGGACCGAGTGCATGATGCCAAACTTAGGCGTTTATTGAAGTTCGATATGATGGCTGTCCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTCTGGCTCTTAAGGTGATGCCTCTGCACTTGAATTTTATGTTCATCTGTATCTTTGATTAGTTATCGGACTTATTCGATATTGCATGATCGGTATTGATTTTTAGAGGTGTCCACAGCAATGGCGAGACAGAGATTTTTGCTTATTGTAATTCCTTCAATACTCCTTGCTGATATTTTGTACGATTTATGTGTTAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGTAGAAATTATTCATTCGTACTTGAAAGCAGAAGCTGACTTAGCACCTGAAATTGACGGGTTTAATGCTCTTTTGAAGGCCTTGGTTTGTCATAACTTAGGTGAACTTGCGATGGAGTCGTATTACTTGATGAAAGAAGTAGGTTGTGAGCCAGATAAGGCTTCCTTCAGGATTCTCATAAAAGGATTGGAATCAACGGGAGAGGCAGTTGATTTAAGAACTGTGAAGCAGGATGCACAAAAGCTTTATGGTGAATCACTTGAGTTTCTAGAGGAAGAAGAAGAGACAGCTACAGCCATATCTATGCACTGA ATGAGTTTTATAGCAACTCCTCCGTCGCCGACAATTCTCAGTCCGCCGTTCAATTTACCGAGCTATGGCGGGAAAGCATCCTGCCTACGACTAGGCAGCGCGGAGGGATATCGGAGAGTGACTATGAGAGGCGGAAGTGAAAACCGGAAGCCATTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAGTCGTTGAAGCGAGCCAAGAAAGATTTACAACAATTGGACCGAGTGCATGATGCCAAACTTAGGCGTTTATTGAAGTTCGATATGATGGCTGTCCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTCTGGCTCTTAAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGTAGAAATTATTCATTCGTACTTGAAAGCAGAAGCTGACTTAGCACCTGAAATTGACGGGTTTAATGCTCTTTTGAAGGCCTTGGTTTGTCATAACTTAGGTGAACTTGCGATGGAGTCGTATTACTTGATGAAAGAAGTAGGTTGTGAGCCAGATAAGGCTTCCTTCAGGATTCTCATAAAAGGATTGGAATCAACGGGAGAGGCAGTTGATTTAAGAACTGTGAAGCAGGATGCACAAAAGCTTTATGGTGAATCACTTGAGTTTCTAGAGGAAGAAGAAGAGACAGCTACAGCCATATCTATGCACTGA ATGAGTTTTATAGCAACTCCTCCGTCGCCGACAATTCTCAGTCCGCCGTTCAATTTACCGAGCTATGGCGGGAAAGCATCCTGCCTACGACTAGGCAGCGCGGAGGGATATCGGAGAGTGACTATGAGAGGCGGAAGTGAAAACCGGAAGCCATTGCAGAAGGGGAGGAACCTCAGCATCGAAGCAATTCAAGCGGTGCAGTCGTTGAAGCGAGCCAAGAAAGATTTACAACAATTGGACCGAGTGCATGATGCCAAACTTAGGCGTTTATTGAAGTTCGATATGATGGCTGTCCTTCGCGAGCTCCTTCGCCAGAACGAGTGTTCTCTGGCTCTTAAGGTTTTCGAAGATGTTAGAAATGAACACTGGTACAAGCCTCAGGTCTCGCTGTATGCTGATATTATTACAGTATTGGCTAGCAATGGATTGTTCGAACGAGTAGAAATTATTCATTCGTACTTGAAAGCAGAAGCTGACTTAGCACCTGAAATTGACGGGTTTAATGCTCTTTTGAAGGCCTTGGTTTGTCATAACTTAGGTGAACTTGCGATGGAGTCGTATTACTTGATGAAAGAAGTAGGTTGTGAGCCAGATAAGGCTTCCTTCAGGATTCTCATAAAAGGATTGGAATCAACGGGAGAGGCAGTTGATTTAAGAACTGTGAAGCAGGATGCACAAAAGCTTTATGGTGAATCACTTGAGTTTCTAGAGGAAGAAGAAGAGACAGCTACAGCCATATCTATGCACTGA MSFIATPPSPTILSPPFNLPSYGGKASCLRLGSAEGYRRVTMRGGSENRKPLQKGRNLSIEAIQAVQSLKRAKKDLQQLDRVHDAKLRRLLKFDMMAVLRELLRQNECSLALKVFEDVRNEHWYKPQVSLYADIITVLASNGLFERVEIIHSYLKAEADLAPEIDGFNALLKALVCHNLGELAMESYYLMKEVGCEPDKASFRILIKGLESTGEAVDLRTVKQDAQKLYGESLEFLEEEEETATAISMH
BLAST of Cla015726 vs. Swiss-Prot
Match: PP266_ARATH (Pentatricopeptide repeat-containing protein At3g46870 OS=Arabidopsis thaliana GN=At3g46870 PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19 Identity = 63/193 (32.64%), Postives = 103/193 (53.37%), Query Frame = 1
BLAST of Cla015726 vs. Swiss-Prot
Match: PPR89_ARATH (Pentatricopeptide repeat-containing protein At1g62350 OS=Arabidopsis thaliana GN=At1g62350 PE=2 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.2e-15 Identity = 57/172 (33.14%), Postives = 89/172 (51.74%), Query Frame = 1
BLAST of Cla015726 vs. Swiss-Prot
Match: PP186_ARATH (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 5.3e-08 Identity = 35/119 (29.41%), Postives = 62/119 (52.10%), Query Frame = 1
BLAST of Cla015726 vs. Swiss-Prot
Match: PP279_ARATH (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana GN=At3g53170 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-07 Identity = 32/113 (28.32%), Postives = 56/113 (49.56%), Query Frame = 1
BLAST of Cla015726 vs. TrEMBL
Match: A0A0A0K6A9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G027870 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 2.6e-115 Identity = 217/248 (87.50%), Postives = 229/248 (92.34%), Query Frame = 1
BLAST of Cla015726 vs. TrEMBL
Match: W9QLL7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013743 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.2e-69 Identity = 142/221 (64.25%), Postives = 172/221 (77.83%), Query Frame = 1
BLAST of Cla015726 vs. TrEMBL
Match: A0A0D2RM85_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G216000 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.9e-69 Identity = 144/226 (63.72%), Postives = 173/226 (76.55%), Query Frame = 1
BLAST of Cla015726 vs. TrEMBL
Match: A0A061E3K5_THECC (Vacuolar sorting protein 9 domain OS=Theobroma cacao GN=TCM_007598 PE=4 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 5.4e-68 Identity = 136/211 (64.45%), Postives = 165/211 (78.20%), Query Frame = 1
BLAST of Cla015726 vs. TrEMBL
Match: M5VMD1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016058mg PE=4 SV=1) HSP 1 Score: 265.4 bits (677), Expect = 7.0e-68 Identity = 137/204 (67.16%), Postives = 162/204 (79.41%), Query Frame = 1
BLAST of Cla015726 vs. NCBI nr
Match: gi|659100627|ref|XP_008451190.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Cucumis melo]) HSP 1 Score: 423.7 bits (1088), Expect = 2.2e-115 Identity = 218/249 (87.55%), Postives = 230/249 (92.37%), Query Frame = 1
BLAST of Cla015726 vs. NCBI nr
Match: gi|449454430|ref|XP_004144958.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Cucumis sativus]) HSP 1 Score: 422.9 bits (1086), Expect = 3.8e-115 Identity = 217/248 (87.50%), Postives = 229/248 (92.34%), Query Frame = 1
BLAST of Cla015726 vs. NCBI nr
Match: gi|657980994|ref|XP_008382506.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Malus domestica]) HSP 1 Score: 275.8 bits (704), Expect = 7.5e-71 Identity = 139/206 (67.48%), Postives = 166/206 (80.58%), Query Frame = 1
BLAST of Cla015726 vs. NCBI nr
Match: gi|703077933|ref|XP_010090721.1| (hypothetical protein L484_013743 [Morus notabilis]) HSP 1 Score: 270.4 bits (690), Expect = 3.1e-69 Identity = 142/221 (64.25%), Postives = 172/221 (77.83%), Query Frame = 1
BLAST of Cla015726 vs. NCBI nr
Match: gi|645260439|ref|XP_008235830.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g62350-like [Prunus mume]) HSP 1 Score: 270.0 bits (689), Expect = 4.1e-69 Identity = 138/204 (67.65%), Postives = 164/204 (80.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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