Cla015669 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla015669
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	N-acetyltransferase (AHRD V1 -- B6TRH8_MAIZE)
Location	Chr2 : 2487250 .. 2488163 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCCAAGTTAAAGTTGAGCCCACTCAAATGGGGCGATAGGTATTGGTGGGCTTCTCTTGGAAGTGGCGGTTGGACTGCCTCCTCGCCGTCTTTGCCACTGCTTTCTTTCCTCCCTCCACTAGCAAATGAACAGTGCCCTCGAGAATTCATTCCAGGAAAAGCTCTGATACACGCTGACAGTGAGTCCCAGTGGGAGAGATGAAGAAAAATGGAGTGAGCTTAGAAGGGGAAAGGGTAATTTTGGTGCCTTACATGGAAGCCCACGTACCCAAGTATCACCAATGGATGAAAGACCCAGCTCTTCTTCAAGCCACCGGCTCCGAACCCCTCACTCTTGATCAAGAGTACCAGATGCAACAATCATGGAACCAAGACCCAAACAGTTCTCTTTCTCACTTTATCATCTTCATTTGTTTGTTTCCTCTCATAATTTCATCAAATTTTTATTTGGGTTGTGTTTTAAAATTCTTGGTATTGATCGAAATAAGGTTATGTTTGTTTTTGCAATCCTTCTTAACATGGTATGGATTTGGGGGTGGCTTTTTCAGAGCAGACTTTCATTGTATTGGATAAGGAATTGGTTGAGGGAAAATTCATCCATGGAAATCCTGGTGTTGAGGGTTAGTTCTTTGGTCTTTGCTCTTTAGTTTAACTGATAATTTTTGTTGGGGGTTGCTTTGTCTATATGCTTTGTCTCTGTATTTCCAGCCATGGTTGGTGATGTGAATCTTTACATGAATGATCTGGACGACTCTCTTTTAGCAGAGATTGAAATAATGATAGCTGAATCCAAAAGGTACAAGATTTCATCTTCTTTTCGTTATGTACATGTTTTTATTCTTTGATTGCTCAAATGCGTTTGGTAGTGGTCTTTTGATCTCTGATTTCTTCAATGACTGTGGTCTGTGA

mRNA sequence

ATGAAACCCAAGTTAAAGTTGAGCCCACTCAAATGGGGCGATAGGTATTGGTGGGCTTCTCTTGGAAGTGGCGGTTGGACTGCCTCCTCGCCGTCTTTGCCACTGCTTTCTTTCCTCCCTCCACTAGCAAATGAACAGTGCCCTCGAGAATTCATTCCAGGAAAAGCTCTGATACACGCTGACAAGCAGACTTTCATTGTATTGGATAAGGAATTGGTTGAGGGAAAATTCATCCATGGAAATCCTGGTGTTGAGGCCATGGTTGGTGATGTGAATCTTTACATGAATGATCTGGACGACTCTCTTTTAGCAGAGATTGAAATAATGATAGCTGAATCCAAAAGTGGTCTTTTGATCTCTGATTTCTTCAATGACTGTGGTCTGTGA

Coding sequence (CDS)

ATGAAACCCAAGTTAAAGTTGAGCCCACTCAAATGGGGCGATAGGTATTGGTGGGCTTCTCTTGGAAGTGGCGGTTGGACTGCCTCCTCGCCGTCTTTGCCACTGCTTTCTTTCCTCCCTCCACTAGCAAATGAACAGTGCCCTCGAGAATTCATTCCAGGAAAAGCTCTGATACACGCTGACAAGCAGACTTTCATTGTATTGGATAAGGAATTGGTTGAGGGAAAATTCATCCATGGAAATCCTGGTGTTGAGGCCATGGTTGGTGATGTGAATCTTTACATGAATGATCTGGACGACTCTCTTTTAGCAGAGATTGAAATAATGATAGCTGAATCCAAAAGTGGTCTTTTGATCTCTGATTTCTTCAATGACTGTGGTCTGTGA

Protein sequence

MKPKLKLSPLKWGDRYWWASLGSGGWTASSPSLPLLSFLPPLANEQCPREFIPGKALIHADKQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKSGLLISDFFNDCGL

Homology

[Close]

BLAST of Cla015669 vs. Swiss-Prot
Match: NAT9_NEMVE (N-acetyltransferase 9-like protein OS=Nematostella vectensis GN=nat9 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.7e-07
Identity = 31/55 (56.36%), Postives = 36/55 (65.45%), Query Frame = 1


Query: 61  DKQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           +K TFIVLDK+       +GN  +E+M GDVNL+ ND DD  +AEIEIMIAE  S
Sbjct: 62  NKCTFIVLDKQKWND---NGNNEIESMAGDVNLFFNDPDDLHVAEIEIMIAEPSS 113

[Close]

BLAST of Cla015669 vs. Swiss-Prot
Match: NAT9_HUMAN (N-acetyltransferase 9 OS=Homo sapiens GN=NAT9 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 9.6e-06
Identity = 29/53 (54.72%), Postives = 33/53 (62.26%), Query Frame = 1


Query: 60  ADKQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAE 113
           ADK TFIVLD E  + +   G      MVGDVNL++ DL+D  L EIE+MIAE
Sbjct: 62  ADKCTFIVLDAEKWQAQ--PGATEESCMVGDVNLFLTDLEDLTLGEIEVMIAE 112

[Close]

BLAST of Cla015669 vs. TrEMBL
Match: A0A0A0K577_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033400 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-19
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           KQTFIVLDKELVEGKFIHGN GVEAMVGDVNLYMNDLDDSLLAEIEIMIAE KS
Sbjct: 65  KQTFIVLDKELVEGKFIHGNSGVEAMVGDVNLYMNDLDDSLLAEIEIMIAEFKS 118

[Close]

BLAST of Cla015669 vs. TrEMBL
Match: A0A068U8I3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018616001 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-16
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           KQTFIVLDKELV G+F+HG+P VEAMVGDVN+YMNDLDD+ +AEIEIMIAE+KS
Sbjct: 59  KQTFIVLDKELVVGEFVHGDPHVEAMVGDVNIYMNDLDDAEMAEIEIMIAETKS 112

[Close]

BLAST of Cla015669 vs. TrEMBL
Match: A0A061DKU2_THECC (Acyl-CoA N-acyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_002300 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           K+TFIVLDK +VEGKF+HG P VEAMVGDVN+YMNDLDD  LAEIEIMIAE KS
Sbjct: 59  KKTFIVLDKGMVEGKFVHGGPHVEAMVGDVNIYMNDLDDPQLAEIEIMIAEPKS 112

[Close]

BLAST of Cla015669 vs. TrEMBL
Match: A0A061DL38_THECC (Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_002300 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.6e-15
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           K+TFIVLDK +VEGKF+HG P VEAMVGDVN+YMNDLDD  LAEIEIMIAE KS
Sbjct: 59  KKTFIVLDKGMVEGKFVHGGPHVEAMVGDVNIYMNDLDDPQLAEIEIMIAEPKS 112

[Close]

BLAST of Cla015669 vs. TrEMBL
Match: V4W4L0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016673mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.7e-15
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKSGLLISD 121
           K+TFIVLDK+LVEG F+HG+P VEAMVGDVN+YMNDLD+  LAE+EIMIAE KS  ++ D
Sbjct: 60  KKTFIVLDKDLVEGTFVHGDPHVEAMVGDVNIYMNDLDNLELAEVEIMIAEPKSLAVVKD 119

[Close]

BLAST of Cla015669 vs. NCBI nr
Match: gi|659124333|ref|XP_008462102.1| (PREDICTED: N-acetyltransferase 9-like protein [Cucumis melo])

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-19
Identity = 51/54 (94.44%), Postives = 52/54 (96.30%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDS LAE+EIMIAE KS
Sbjct: 65  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSRLAEVEIMIAEFKS 118

[Close]

BLAST of Cla015669 vs. NCBI nr
Match: gi|449453590|ref|XP_004144539.1| (PREDICTED: N-acetyltransferase 9-like protein [Cucumis sativus])

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-19
Identity = 52/54 (96.30%), Postives = 52/54 (96.30%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           KQTFIVLDKELVEGKFIHGN GVEAMVGDVNLYMNDLDDSLLAEIEIMIAE KS
Sbjct: 65  KQTFIVLDKELVEGKFIHGNSGVEAMVGDVNLYMNDLDDSLLAEIEIMIAEFKS 118

[Close]

BLAST of Cla015669 vs. NCBI nr
Match: gi|661891687|emb|CDP04612.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 92.0 bits (227), Expect = 7.9e-16
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           KQTFIVLDKELV G+F+HG+P VEAMVGDVN+YMNDLDD+ +AEIEIMIAE+KS
Sbjct: 59  KQTFIVLDKELVVGEFVHGDPHVEAMVGDVNIYMNDLDDAEMAEIEIMIAETKS 112

[Close]

BLAST of Cla015669 vs. NCBI nr
Match: gi|590712010|ref|XP_007049268.1| (Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-15
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           K+TFIVLDK +VEGKF+HG P VEAMVGDVN+YMNDLDD  LAEIEIMIAE KS
Sbjct: 59  KKTFIVLDKGMVEGKFVHGGPHVEAMVGDVNIYMNDLDDPQLAEIEIMIAEPKS 112

[Close]

BLAST of Cla015669 vs. NCBI nr
Match: gi|590712006|ref|XP_007049267.1| (Acyl-CoA N-acyltransferases superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 90.5 bits (223), Expect = 2.3e-15
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 62  KQTFIVLDKELVEGKFIHGNPGVEAMVGDVNLYMNDLDDSLLAEIEIMIAESKS 116
           K+TFIVLDK +VEGKF+HG P VEAMVGDVN+YMNDLDD  LAEIEIMIAE KS
Sbjct: 59  KKTFIVLDKGMVEGKFVHGGPHVEAMVGDVNIYMNDLDDPQLAEIEIMIAEPKS 112

The following BLAST results are available for this feature:

BLAST of Cla015669 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAT9_NEMVE	6.7e-07	56.36	N-acetyltransferase 9-like protein OS=Nematostella vectensis GN=nat9 PE=3 SV=1	[more]
NAT9_HUMAN	9.6e-06	54.72	N-acetyltransferase 9 OS=Homo sapiens GN=NAT9 PE=1 SV=1	[more]

BLAST of Cla015669 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K577_CUCSA	3.1e-19	96.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033400 PE=4 SV=1	[more]
A0A068U8I3_COFCA	5.5e-16	81.48	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00018616001 PE=4 SV=1	[more]
A0A061DKU2_THECC	1.6e-15	81.48	Acyl-CoA N-acyltransferases superfamily protein isoform 1 OS=Theobroma cacao GN=...	[more]
A0A061DL38_THECC	1.6e-15	81.48	Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 2 OS=Theobroma cac...	[more]
V4W4L0_9ROSI	2.7e-15	71.67	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016673mg PE=4 SV=1	[more]

BLAST of Cla015669 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124333\|ref\|XP_008462102.1\|	3.4e-19	94.44	PREDICTED: N-acetyltransferase 9-like protein [Cucumis melo]	[more]
gi\|449453590\|ref\|XP_004144539.1\|	4.5e-19	96.30	PREDICTED: N-acetyltransferase 9-like protein [Cucumis sativus]	[more]
gi\|661891687\|emb\|CDP04612.1\|	7.9e-16	81.48	unnamed protein product [Coffea canephora]	[more]
gi\|590712010\|ref\|XP_007049268.1\|	2.3e-15	81.48	Acyl-CoA N-acyltransferases (NAT) superfamily protein isoform 2 [Theobroma cacao...	[more]
gi\|590712006\|ref\|XP_007049267.1\|	2.3e-15	81.48	Acyl-CoA N-acyltransferases superfamily protein isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016181	Acyl_CoA_acyltransferase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042967	acyl-carrier-protein biosynthetic process
biological_process	GO:0006474	N-terminal protein amino acid acetylation
biological_process	GO:0008150	biological_process
biological_process	GO:0006473	protein acetylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008080	N-acetyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU47893	watermelon EST collection version 2.0	transcribed_cluster
WMU64590	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla015669	Cla015669.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU47893	WMU47893	transcribed_cluster
WMU64590	WMU64590	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016181	Acyl-CoA N-acyltransferase	GENE3D	G3DSA:3.40.630.30		coord: 59..114 score: 5.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla015669	Cla97C02G029130	Watermelon (97103) v2	wmwmbB317
Cla015669	Csa7G033400	Cucumber (Chinese Long) v2	cuwmB604
Cla015669	MELO3C024213	Melon (DHL92) v3.5.1	mewmB241
Cla015669	ClCG02G002620	Watermelon (Charleston Gray)	wcgwmB198
Cla015669	CSPI07G02870	Wild cucumber (PI 183967)	cpiwmB624
Cla015669	Cucsa.100480	Cucumber (Gy14) v1	cgywmB130
Cla015669	CmaCh19G008760	Cucurbita maxima (Rimu)	cmawmB503
Cla015669	CmoCh19G008890	Cucurbita moschata (Rifu)	cmowmB496
Cla015669	Lsi11G013660	Bottle gourd (USVL1VR-Ls)	lsiwmB106
Cla015669	Cp4.1LG15g06950	Cucurbita pepo (Zucchini)	cpewmB268
Cla015669	CsGy7G002490	Cucumber (Gy14) v2	cgybwmB566
Cla015669	MELO3C024213.2	Melon (DHL92) v3.6.1	medwmB233
Cla015669	Carg04160	Silver-seed gourd	carwmB0194
Cla015669	CsaV3_7G002720	Cucumber (Chinese Long) v3	cucwmB634
Cla015669	Bhi05G001271	Wax gourd	wgowmB272

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla015669	Cucumber (Gy14) v2	cgybwmB484
Cla015669	Melon (DHL92) v3.6.1	medwmB109
Cla015669	Silver-seed gourd	carwmB0334
Cla015669	Silver-seed gourd	carwmB1066
Cla015669	Cucumber (Chinese Long) v3	cucwmB541
Cla015669	Watermelon (97103) v2	wmwmbB333
Cla015669	Wax gourd	wgowmB403
Cla015669	Cucumber (Gy14) v1	cgywmB186
Cla015669	Cucurbita maxima (Rimu)	cmawmB121
Cla015669	Cucurbita maxima (Rimu)	cmawmB527
Cla015669	Cucurbita moschata (Rifu)	cmowmB117
Cla015669	Melon (DHL92) v3.5.1	mewmB110
Cla015669	Watermelon (Charleston Gray)	wcgwmB079
Cla015669	Watermelon (Charleston Gray)	wcgwmB215
Cla015669	Cucurbita pepo (Zucchini)	cpewmB305
Cla015669	Cucurbita pepo (Zucchini)	cpewmB675
Cla015669	Bottle gourd (USVL1VR-Ls)	lsiwmB080