Cla015078 (gene) Watermelon (97103) v1

Overview
NameCla015078
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPolygalacturonase (AHRD V1 ***- Q2M4X6_LILLO); contains Interpro domain(s) IPR000743 Glycoside hydrolase, family 28
LocationChr9 : 4519014 .. 4520891 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAATGACAAGAAGTCTTAGCCTCTTTCAAATCCTTCTCTTAGTATTTGGTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCGACGACGTCACTGGCGCTGCAAATGTCGCCGACGGGATCGTATCAACGAAAAATCAGCAGCTTCTTCATTCCGCAGCAGCACCGCGGCCTCTACGTATCGGAACTCTTCCGGACATCGGCGGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGGAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGCGATGGAAAGACTGATGATGCACAGGTGAGAATATCACACAAAACTTCAAACATTTAATTTGAATTAATTATCTTTGAACTTAGTAAATTATTTAAATTTGAGCCATTATTTTGCAACTACATCGTACCTTAGCTTGTTGTAGCTCTATCAGCAATTGGGTTTCATTAATTATAATCATTTTAAAGCAATATTTAGATGTATTTTGGATTGACAAAAATAAATAAATAAATAAATAAATTTATTGTTGATTTCCCACGTGGCAGGCATTCATGACAACATGGATTGCAGCCTGCCGGAACACAGTCGGTCCGGCGAAGTTTTTGATCCCAGAAGGCACATTTCTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCGATCACCTTGGAAAATCGGGGAACTGTGAAGGCCACCACCGATATCACTGAATATTCTTCTCCAGAATGGTTCTCCATTGAAGATATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCGCAGCCACTTGGCCTTACAATGACTGCAAGAAAAGCAAATTCTGCCAGGCTCTTCCTATCGTAAGTATAATTCTCTATTACTCGATCACTCCTCATTTAATTCTAAACTACGACCTACGGAAAACGTACTTCAAACTATTAGAATTGCGTCTAATACACACTTGAACTTTGAAAAAAAACATGACTTAATTATAGATCACTCAATATTATAATTGTTATTGATTTATTTTTCTCTTTTTTTTTAGTCAATTAAATTCTCGAGATTGAACCACACGATCGTTGATGGGCTCTCTTCAATTAATAGCAAAGGCTTTCACACGTCTGTATTTTATTCCTATAATTTCACTGCTACAAACATGAACATTATAGCACCAGGAAATAGCCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACTAACAGCGTCATCGGCACTGGTGATGACTGCGTCTCCATTGGCCACAGTTGTGAGAAAATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTCAGGTAATTATTGTATACATTTTTTTTTTGAAAAAGTTCGAAGATTAAGAAACACAACAAGAAAACATCTCATGCTCTTTACCCTTATCTTTCAGCGTGGGCAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCGCTGAAGTTCTAGTAAGGACCTGCACCATTTTCAATGCTACAAATGGTGCTAGAATCAAGACATGGGCTAGCCCTATCTCAGGAGTAGCCTCGGGAATAATCTTCGAAGACATCGTAATGTACAATGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAGGGGAATAAGATGGTAATAATAACACAAGAACGACGATGAAAAAAAAAAAAACCGAGGGGGGCGGTGTTGTTGGAGTGCAGCGAGTTGCTTCCATGTGAGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGAGGCACCAACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGTTTTCTACTTTTGGGGTGCAAAATCCACCGCCTTGTGTTGTATAA

mRNA sequence

ATGACAATGACAAGAAGTCTTAGCCTCTTTCAAATCCTTCTCTTAGTATTTGGTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCGACGACGTCACTGGCGCTGCAAATGTCGCCGACGGGATCGTATCAACGAAAAATCAGCAGCTTCTTCATTCCGCAGCAGCACCGCGGCCTCTACGTATCGGAACTCTTCCGGACATCGGCGGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGGAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGCGATGGAAAGACTGATGATGCACAGGCATTCATGACAACATGGATTGCAGCCTGCCGGAACACAGTCGGTCCGGCGAAGTTTTTGATCCCAGAAGGCACATTTCTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCGATCACCTTGGAAAATCGGGGAACTGTGAAGGCCACCACCGATATCACTGAATATTCTTCTCCAGAATGGTTCTCCATTGAAGATATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCGCAGCCACTTGGCCTTACAATGACTGCAAGAAAAGCAAATTCTGCCAGGCTCTTCCTATCTCAATTAAATTCTCGAGATTGAACCACACGATCGTTGATGGGCTCTCTTCAATTAATAGCAAAGGCTTTCACACGTCTGTATTTTATTCCTATAATTTCACTGCTACAAACATGAACATTATAGCACCAGGAAATAGCCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACTAACAGCGTCATCGGCACTGGTGATGACTGCGTCTCCATTGGCCACAGTTGTGAGAAAATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTCAGCGTGGGCAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCGCTGAAGTTCTAGTAAGGACCTGCACCATTTTCAATGCTACAAATGGTGCTAGAATCAAGACATGGGCTAGCCCTATCTCAGGAGTAGCCTCGGGAATAATCTTCGAAGACATCGTAATGTACAATGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAGGGGAATAAGATGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGAGGCACCAACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGTTTTCTACTTTTGGGGTGCAAAATCCACCGCCTTGTGTTGTATAA

Coding sequence (CDS)

ATGACAATGACAAGAAGTCTTAGCCTCTTTCAAATCCTTCTCTTAGTATTTGGTTGGCAATGCTGTGCAAAGGTTGCTGCCATTTTCGACGACGTCACTGGCGCTGCAAATGTCGCCGACGGGATCGTATCAACGAAAAATCAGCAGCTTCTTCATTCCGCAGCAGCACCGCGGCCTCTACGTATCGGAACTCTTCCGGACATCGGCGGCACGGTAAATGACATTAAGGCAAATGTTGATCTGAATGGGAATGGTGGTGCAGTTTTTGATGTTACAAAACATGGAGCTAAAGGCGATGGAAAGACTGATGATGCACAGGCATTCATGACAACATGGATTGCAGCCTGCCGGAACACAGTCGGTCCGGCGAAGTTTTTGATCCCAGAAGGCACATTTCTAGTGGGTCCGGTGACTTTTGCCGGTCCGTGCAAAAGCTTCCCGATCACCTTGGAAAATCGGGGAACTGTGAAGGCCACCACCGATATCACTGAATATTCTTCTCCAGAATGGTTCTCCATTGAAGATATCACTGGCTTCATCCTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCGCAGCCACTTGGCCTTACAATGACTGCAAGAAAAGCAAATTCTGCCAGGCTCTTCCTATCTCAATTAAATTCTCGAGATTGAACCACACGATCGTTGATGGGCTCTCTTCAATTAATAGCAAAGGCTTTCACACGTCTGTATTTTATTCCTATAATTTCACTGCTACAAACATGAACATTATAGCACCAGGAAATAGCCCCAACACCGATGGAATGCACCTTAGCACCTCAAAATTGGTCACCATTACTAACAGCGTCATCGGCACTGGTGATGACTGCGTCTCCATTGGCCACAGTTGTGAGAAAATCACCGTCACCAATGTCACTTGCGGCCCTGGACATGGCCTCAGCGTGGGCAGCTTGGGCAAGTACCCGAAAGAGAAGGGTGTCGCTGAAGTTCTAGTAAGGACCTGCACCATTTTCAATGCTACAAATGGTGCTAGAATCAAGACATGGGCTAGCCCTATCTCAGGAGTAGCCTCGGGAATAATCTTCGAAGACATCGTAATGTACAATGTCAAAAATCCTATAATCATCGATCAAACCTACGGCACCAAGGGGAATAAGATGGGGGTGGAGCTGAGGGACATTAACTTGACTTATGGAGGCACCAACTTGAGGAATACGACCATTCTTTCTTCATGTATGAATGCAAAGTTTTCTACTTTTGGGGTGCAAAATCCACCGCCTTGTGTTGTATAA

Protein sequence

MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLRIGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKMGVELRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCVV
Homology
[Close]
BLAST of Cla015078 vs. Swiss-Prot
Match: PGLR1_ARATH (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 1.8e-80
Identity = 152/321 (47.35%), Postives = 199/321 (61.99%), Query Frame = 1 

Query: 82  NGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAG 141
           N     V+D+TK GA GDG T+  +AF+ TWI  C + V PA  L+P+GTFL GPV FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVCDSPV-PATLLVPKGTFLAGPVIFAG 104

Query: 142 PCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCK 201
           PCKS  +T+   GT+ ATT  + Y++PEWF  E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKS-KVTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 202 KSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTD 261
           K   C   P S+KF  + +  ++G+SS+N+K FH  +  + N    N+ + AP  SPNTD
Sbjct: 165 KKVQCNLPPTSLKFRNMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLTAPAESPNTD 224

Query: 262 GMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGV 321
           G+HLS +  V+I +S I TGDDCVS+G     +TV  V CGPGHGLSVGSLGKY  E+ V
Sbjct: 225 GIHLSNADNVSILDSTIATGDDCVSVGRGSNNVTVERVICGPGHGLSVGSLGKYKNEEDV 284

Query: 322 AEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKM 381
           + + V  CT+    NG RIKTW       A  I FE+I+M +VKNPIIIDQ YG++G   
Sbjct: 285 SGIHVNNCTMIETDNGLRIKTWGGSDPSKAVDIKFENIIMQSVKNPIIIDQNYGSRGGDS 344

Query: 382 GVELRDINLTYGGTNLRNTTI 403
            V + DI       N+R TTI
Sbjct: 345 QVAISDILF----KNIRGTTI 357

[Close]
BLAST of Cla015078 vs. Swiss-Prot
Match: PGLR_TOBAC (Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.3e-70
Identity = 147/370 (39.73%), Postives = 206/370 (55.68%), Query Frame = 1 

Query: 88  VFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFP 147
           VFD+TK+GA  +   D ++A +  +  AC++T  P+  +IP+GTF +  V   GPCKS P
Sbjct: 26  VFDITKYGANSNA--DISEALLNAFKEACQST-SPSTIVIPKGTFTMNQVKLEGPCKS-P 85

Query: 148 ITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQ 207
           + L+ + T+KA +D ++    EW ++  +  F ++G G+ DGQ AA W   +CK+SK C 
Sbjct: 86  LELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGILDGQAAAAW---ECKQSKKCN 145

Query: 208 ALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLST 267
            LP ++ F+ L ++ +  +++++SK FH +V    N T    N+ AP NSPNTDG+H+S 
Sbjct: 146 KLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRFNVSAPANSPNTDGIHVSR 205

Query: 268 SKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVAEVLVR 327
           S  V IT+S   TGDDC+S+G   E++ +T VTCGPGHG+SVGSLG  P EK V  V VR
Sbjct: 206 SSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISVGSLGGNPDEKPVVGVFVR 265

Query: 328 TCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTY------------- 387
            CT  N  NG RIKTW +   GV + + FEDI++ NV NP++IDQ Y             
Sbjct: 266 NCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVVIDQVYCPFNKCNKDLPSQ 325

Query: 388 ------------GTKGNKMGVE-LRDINLTYGGTNLRNTTIL---------SSCMNAKFS 423
                       GT   +  V  LR   +   G  + +  I          SSC N K S
Sbjct: 326 VKISKVSFQNIKGTSRTQDAVSLLRSKGVPCEGIEVGDIDITYSGKEGPAKSSCENIKPS 385

[Close]
BLAST of Cla015078 vs. Swiss-Prot
Match: PGLR2_PLAAC (Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-70
Identity = 135/329 (41.03%), Postives = 194/329 (58.97%), Query Frame = 1 

Query: 84  NGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPC 143
           + G+VF+V  +GAKG G  D +QA M  W AAC +  GP+  LIP+G + +G V   GPC
Sbjct: 5   SSGSVFNVNDYGAKGAG--DISQAVMKAWKAACASQ-GPSTVLIPKGNYNMGEVAMQGPC 64

Query: 144 KSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKS 203
           K   I  +  G VKA  D +++ S  W S   I G  ++G+G  DGQG   W  N+C K+
Sbjct: 65  KGSKIGFQIDGVVKAPADPSKFKSDGWVSFYRIDGLTVSGTGTLDGQGQTAWAKNNCDKN 124

Query: 204 KFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGM 263
             C+   ++++F  L H +V  ++S+NSK FH +V    + T  ++ + APG S NTDG+
Sbjct: 125 PNCKHAAMNLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGI 184

Query: 264 HLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVAE 323
           H+  SK VTITN+ I TGDDC+SIG   + +T+T V CGPGHG+S+GSLG+Y  EK V  
Sbjct: 185 HVGISKGVTITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRG 244

Query: 324 VLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGN---- 383
           + V+ CT     NG R+KTW +   G A+ + F+D+ M NV+NP+I+DQ Y   G     
Sbjct: 245 ITVKGCTFSGTMNGVRVKTWPNSPPGAATDLTFQDLTMNNVQNPVILDQEYCPYGQCSRQ 304

Query: 384 -KMGVELRDINL-TYGGTNLRNTTILSSC 407
               ++L +IN     GT+     ++ +C
Sbjct: 305 APSRIKLSNINFNNIRGTSTGKVAVVIAC 330

[Close]
BLAST of Cla015078 vs. Swiss-Prot
Match: PGLR3_MAIZE (Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.7e-70
Identity = 146/339 (43.07%), Postives = 198/339 (58.41%), Query Frame = 1 

Query: 73  NDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTF 132
           ND KA+    G GG+ FD+TK GA G+GKTD  +A    W +AC  T G    LIP+G F
Sbjct: 30  NDAKAS----GPGGS-FDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDF 89

Query: 133 LVGPVTFAGPCKSFPITLENRGTVKATTDITEYSS-PEWFSIEDITGFILTGSGVFDGQG 192
           LVGP+ F GPCK   +T++  G + ATTD+++Y     W  I  +   ++TG G  DGQG
Sbjct: 90  LVGPLNFTGPCKG-DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQG 149

Query: 193 AATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNI 252
            A W  N C K   C+ LP S+    +N+  V G++ +NSK FH +++   +    ++N+
Sbjct: 150 PAVWSKNSCVKKYDCKILPNSLVMDFVNNGEVSGITLLNSKFFHMNMYKCKDMLIKDVNV 209

Query: 253 IAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGS 312
            APG+SPNTDG+H+  S  VTITN+VIG GDDC+SIG    K+ +T VTCGPGHG+S+GS
Sbjct: 210 TAPGDSPNTDGIHMGDSSGVTITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGS 269

Query: 313 LGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGV-ASGIIFEDIVMYNVKNPIII 372
           LG+Y  EK V ++ V+ CT+    NG RIK +    S + AS I +E+I M +   PIII
Sbjct: 270 LGRYKDEKDVTDINVKDCTLKKTANGVRIKAYEDAASVLTASKIHYENIKMEDSGYPIII 329

Query: 373 DQTYGTKGNKMGVELRDINLTYGGTNLRNTTILSSCMNA 410
           D  Y    NK+        +T      +N T  SS   A
Sbjct: 330 DMKYCP--NKLCTANGASKVTVKDVTFKNITGTSSTPEA 359

[Close]
BLAST of Cla015078 vs. Swiss-Prot
Match: PGLR2_ARATH (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 8.2e-70
Identity = 147/347 (42.36%), Postives = 195/347 (56.20%), Query Frame = 1 

Query: 68  IGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLI 127
           +GG    + A V      GA  DV   GAKGD KTDD+ AF   W  AC      +   +
Sbjct: 50  VGGAAASVGAKVS-GAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEAC---AAGSTITV 109

Query: 128 PEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDI-TEYSSPEWFSIEDITGFILTGS-G 187
           P+G ++V  + F GPCK  P+TLE  G  KA   + T      W   E+I  F L G+  
Sbjct: 110 PKGEYMVESLEFKGPCKG-PVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKA 169

Query: 188 VFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFT 247
           +FDGQG+  W  NDC K+  C +LPI+I+F+ L ++ ++ ++S NSK FH ++    N T
Sbjct: 170 IFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNIT 229

Query: 248 ATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGH 307
            +++ I AP  S NTDG+H+  S  V +  + I TGDDCVSIG   E + V NV CGPGH
Sbjct: 230 LSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGH 289

Query: 308 GLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVK 367
           G+S+GSLG+YP E+ V  V VR C I N  NG RIKTW     G+AS I+FEDI M NV 
Sbjct: 290 GISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVS 349

Query: 368 NPIIIDQTYGTKGN-KMG----VELRDINLT-YGGTNLRNTTILSSC 407
            P++IDQ Y   G+ K G    V+L D+ +    GT+     +   C
Sbjct: 350 LPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMC 391

[Close]
BLAST of Cla015078 vs. TrEMBL
Match: A0A0A0KMA6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222970 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 1.9e-177
Identity = 318/418 (76.08%), Postives = 339/418 (81.10%), Query Frame = 1 

Query: 41  GIVSTKNQQLLHSAAAPRPLRIGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDG 100
           GIV T N+Q L  A APR L   TLPDIGGTVNDI ANVDLN NGG+VFDVTKHGAK DG
Sbjct: 8   GIVPTTNKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADG 67

Query: 101 KTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATT 160
           KTDDAQAFMTTWIAACRNTVGPAKFLIP+GTFLVGPVTFAGPCKS+PITLEN+GTVKATT
Sbjct: 68  KTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATT 127

Query: 161 DITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNH 220
           DI+ YSSPEWFS+EDITGFILTGSGVFDGQG + WPYNDCKK+  CQ LPISIKF+RLNH
Sbjct: 128 DISAYSSPEWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNH 187

Query: 221 TIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGT 280
           TIVDGL+SINS GFHTSVFY YNFTATNM IIAP NSPNTDGMHLSTSKLVTI NS+IGT
Sbjct: 188 TIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGT 247

Query: 281 GDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARI 340
           GDDCVSIGHS E ITVTNVTCGPGHGL   SLGKY KEKGV +VLV+ CTIFNATNGARI
Sbjct: 248 GDDCVSIGHSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARI 307

Query: 341 KTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNK------MGVELRDINLTYG- 400
           KTWASP+SG+AS IIFEDIVMYNVKNPIIIDQTYGTK  K        V+ ++I  T   
Sbjct: 308 KTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTT 367

Query: 401 ---------------------------GTNLRNTTILSSCMNAKFSTFGVQNPPPCVV 425
                                      GTNLRNTTI+SSC NAK +TFGVQ PPPCVV
Sbjct: 368 NVAVLLECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]
BLAST of Cla015078 vs. TrEMBL
Match: A0A0A0K5G0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375750 PE=3 SV=1)

HSP 1 Score: 627.5 bits (1617), Expect = 1.2e-176
Identity = 322/458 (70.31%), Postives = 360/458 (78.60%), Query Frame = 1 

Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHS-AAAPRP 60
           MT++R LSLFQILLLVF WQC  KVAAI  D    AN+ + I+ST NQQL+ S  A P P
Sbjct: 1   MTISRILSLFQILLLVFAWQCYDKVAAIITD--DIANLNNEIISTINQQLIPSPTATPGP 60

Query: 61  LRIGTLPDIGGTVNDIK-ANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRN 120
           L + TLPD+  TVND    N DLN NG +VFDVTKHGAK DGKTDDAQAF TTWIAACRN
Sbjct: 61  LGMETLPDLDDTVNDSNNTNNDLNENGESVFDVTKHGAKADGKTDDAQAFETTWIAACRN 120

Query: 121 TVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITG 180
           TVGP K LIP+GT+LVGP+T AGPCKSFPIT+EN+G VKATTD++EYSSPEWFSIEDITG
Sbjct: 121 TVGPVKILIPKGTYLVGPMTLAGPCKSFPITIENQGIVKATTDLSEYSSPEWFSIEDITG 180

Query: 181 FILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSV 240
           FILTGSGVFDGQG A W YNDCK +K CQ LPISIKFS LNHTIVDG++S+NSKGFH S+
Sbjct: 181 FILTGSGVFDGQGTAVWAYNDCKSNKDCQLLPISIKFSGLNHTIVDGITSLNSKGFHMSL 240

Query: 241 FYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTN 300
           F  YNFT TN+NIIAP  SPNTDG+HLSTS+LV I NS+IGTGDDCVSIGHS  KITVTN
Sbjct: 241 FNCYNFTITNVNIIAPDESPNTDGIHLSTSELVNIMNSIIGTGDDCVSIGHSTVKITVTN 300

Query: 301 VTCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFED 360
           VTCGPGHGLSVGSLGKY +EK V +VLV+ CTIFNATNGARIKT+ASPISG+ASGIIFED
Sbjct: 301 VTCGPGHGLSVGSLGKYSREKDVYDVLVKNCTIFNATNGARIKTFASPISGLASGIIFED 360

Query: 361 IVMYNVKNPIIIDQTYGT------------------KGNKM----------------GVE 420
           I+MYNVK PIIIDQTY T                  +G                   GV 
Sbjct: 361 IIMYNVKYPIIIDQTYSTDENKESKWKVSDVHFKNIRGTSATNVGVLLECSKLLPCEGVV 420

Query: 421 LRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPC 423
           L+DINLTYGGT+ +NTTI+SSC+NAK +TFGVQNPPPC
Sbjct: 421 LKDINLTYGGTDSKNTTIVSSCLNAKITTFGVQNPPPC 456

[Close]
BLAST of Cla015078 vs. TrEMBL
Match: A0A0A0K5I2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398220 PE=3 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 2.1e-152
Identity = 276/364 (75.82%), Postives = 299/364 (82.14%), Query Frame = 1 

Query: 3   MTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLRI 62
           MTR+ SL QILLLVF W+CCA+ AAIF D      + +GIV   N+Q L  A AP  L  
Sbjct: 1   MTRNFSLIQILLLVFAWECCARAAAIFIDTINTQILLNGIVPKVNEQFLRPAEAPWHLGF 60

Query: 63  GTLPDIGG-TVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVG 122
            TLP+IGG TVNDIK NVDLN NGG VFDVTKHGAK DG+TDDAQAFMTTWIAACRNTVG
Sbjct: 61  STLPNIGGGTVNDIKVNVDLNENGGLVFDVTKHGAKADGETDDAQAFMTTWIAACRNTVG 120

Query: 123 PAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFIL 182
           PAKFLIP+  FLVGPVTFAGPCKSFPITLEN+GTVKATTDI+ YSS EWFSIED+TGFIL
Sbjct: 121 PAKFLIPQDIFLVGPVTFAGPCKSFPITLENQGTVKATTDISAYSSSEWFSIEDVTGFIL 180

Query: 183 TGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYS 242
           TGSGVFDGQG +                  SIKFSRLNHTI+DGL+SINS GFHTSVFY 
Sbjct: 181 TGSGVFDGQGVS------------------SIKFSRLNHTIIDGLTSINSMGFHTSVFYC 240

Query: 243 YNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTC 302
           YNFTATNM I AP NSPNTDGMHLSTSKLVTI+NS+IGTGDDCVSIGHS E I +TNVTC
Sbjct: 241 YNFTATNMKITAPHNSPNTDGMHLSTSKLVTISNSIIGTGDDCVSIGHSTENIIITNVTC 300

Query: 303 GPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVM 362
           GPGHGLSVGSLGKY KEKGV +VLV+ CTIFNATNGARIKT+ASPI G+AS I+FEDIVM
Sbjct: 301 GPGHGLSVGSLGKYSKEKGVYDVLVKNCTIFNATNGARIKTFASPIPGLASRIVFEDIVM 346

Query: 363 YNVK 366
           YNVK
Sbjct: 361 YNVK 346

[Close]
BLAST of Cla015078 vs. TrEMBL
Match: W9QFJ0_9ROSA (Exopolygalacturonase clone GBGE184 OS=Morus notabilis GN=L484_011125 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 3.2e-105
Identity = 197/389 (50.64%), Postives = 247/389 (63.50%), Query Frame = 1 

Query: 69  GGTVNDIKANVDLNGNGGAVFDVTKHGAKGDG-KTDDAQAFMTTWIAACRNTVGPAKFLI 128
           G   +D      L   G  +FDVTK+GA  +  + D+ QAFM TW+AACRN+  PAK +I
Sbjct: 34  GHVSDDTGLRRGLTETGRQIFDVTKYGAVANNERKDNVQAFMKTWVAACRNSNAPAKIVI 93

Query: 129 PEGTFLVGPVTFAGPCKSF-PITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGV 188
           P G FLVGPV F GPCKS  PI +E +GTVKATTD+++YSSPEWFS E + G +LTG G 
Sbjct: 94  PTGAFLVGPVVFQGPCKSSEPIVIEVQGTVKATTDVSDYSSPEWFSFEFVNGLVLTGKGT 153

Query: 189 FDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTA 248
           FDGQG   W YNDCK +  CQ L  S++FS +N+  V+G++S+NSK FH  ++ S N T 
Sbjct: 154 FDGQGPKVWHYNDCKTNPNCQHLASSLRFSNVNNAYVEGITSLNSKWFHFFIYESKNITL 213

Query: 249 TNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHG 308
            N+ I AP  SPNTDG+H+S S  V +TN+ I TGDDC+ I   C  I +TNVTCGPGHG
Sbjct: 214 NNVKITAPAESPNTDGIHISASTSVNVTNTAIATGDDCIGIVQDCHNIYITNVTCGPGHG 273

Query: 309 LSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKN 368
           +SVGSLGK+  +KGV+ ++VR CT+ N TNGARIKTW    SG A+GII+E+I+M NVKN
Sbjct: 274 ISVGSLGKWSYDKGVSNIVVRNCTLVNTTNGARIKTWGGTTSGEATGIIYENIIMKNVKN 333

Query: 369 PIIIDQTYGTKGN------------------------KMG---------VELRDINLTYG 423
           PIIIDQ YG K                           +G         VE+ +INL+YG
Sbjct: 334 PIIIDQNYGRKNQPSKWKIKDVHFRNIKGTSASKVSISLGCSSLFPCEVVEMSNINLSYG 393

[Close]
BLAST of Cla015078 vs. TrEMBL
Match: A0A0A0K9C4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G404800 PE=3 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.2e-99
Identity = 185/372 (49.73%), Postives = 239/372 (64.25%), Query Frame = 1 

Query: 88  VFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFP 147
           VF++  HGAK DG+TD  QAFM  W+ AC ++ GPAK + P GTFL GP+ +AGPC   P
Sbjct: 66  VFNIIAHGAKADGRTDSTQAFMQAWVKACHSS-GPAKVVFPPGTFLTGPLVYAGPCDG-P 125

Query: 148 ITLENRGTVKATTDITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQ 207
           +T+E +GTVKATTDI++YSS EW   E +TG  L G G FDGQGA TW YNDC K   C 
Sbjct: 126 MTVEIQGTVKATTDISQYSSAEWILFESVTGLNLIGRGTFDGQGADTWKYNDCSKHPQCI 185

Query: 208 ALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLST 267
             P SIKF+++   +++G++S+NSK FH  V  S+N    N++I+APGNSPNTDG+H+S 
Sbjct: 186 IPPTSIKFNKVTQGLMEGITSVNSKAFHIFVVLSHNIKINNVHIVAPGNSPNTDGVHISQ 245

Query: 268 SKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVAEVLVR 327
           + +V +TNS+IGTGDDCVSIGH    I V N+TCGPGHG+SVGSLGKY  EK V  + V 
Sbjct: 246 TDVVNVTNSIIGTGDDCVSIGHGSTNINVLNITCGPGHGISVGSLGKYRDEKEVRGIFVS 305

Query: 328 TCTIFNATNGARIKTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNKMGVELRD 387
            CTI N TNG RIKTWA+   G A+ I F++IV+  V+NPIIIDQ YG+K  K   +++ 
Sbjct: 306 NCTIRNTTNGVRIKTWAASPPGQATRITFQNIVLDKVRNPIIIDQNYGSKTKKSPSQVKV 365

Query: 388 INLTYGGTNLRNTTI------------------------------------LSSCMNAKF 424
            ++ +   N+R TTI                                     +SC+NAK 
Sbjct: 366 SDVQF--KNIRGTTISPVAVSLQCSAALPCDGIKLEQIDVAFSGTHLKQPFANSCLNAKI 425

[Close]
BLAST of Cla015078 vs. NCBI nr
Match: gi|778708423|ref|XP_011656188.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 668.7 bits (1724), Expect = 6.7e-189
Identity = 339/456 (74.34%), Postives = 365/456 (80.04%), Query Frame = 1 

Query: 3   MTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPLRI 62
           MTR+LSL QI+LL F WQ CA    IF+D+TG  N+  GIV T N+Q L  A APR L  
Sbjct: 1   MTRNLSLIQIILLEFAWQSCA---VIFNDITGTQNLLKGIVPTTNKQFLRPAEAPRHLGF 60

Query: 63  GTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNTVGP 122
            TLPDIGGTVNDI ANVDLN NGG+VFDVTKHGAK DGKTDDAQAFMTTWIAACRNTVGP
Sbjct: 61  NTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADGKTDDAQAFMTTWIAACRNTVGP 120

Query: 123 AKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGFILT 182
           AKFLIP+GTFLVGPVTFAGPCKS+PITLEN+GTVKATTDI+ YSSPEWFS+EDITGFILT
Sbjct: 121 AKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATTDISAYSSPEWFSLEDITGFILT 180

Query: 183 GSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVFYSY 242
           GSGVFDGQG + WPYNDCKK+  CQ LPISIKF+RLNHTIVDGL+SINS GFHTSVFY Y
Sbjct: 181 GSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNHTIVDGLTSINSMGFHTSVFYCY 240

Query: 243 NFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNVTCG 302
           NFTATNM IIAP NSPNTDGMHLSTSKLVTI NS+IGTGDDCVSIGHS E ITVTNVTCG
Sbjct: 241 NFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGTGDDCVSIGHSTENITVTNVTCG 300

Query: 303 PGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDIVMY 362
           PGHGL   SLGKY KEKGV +VLV+ CTIFNATNGARIKTWASP+SG+AS IIFEDIVMY
Sbjct: 301 PGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARIKTWASPVSGLASRIIFEDIVMY 360

Query: 363 NVKNPIIIDQTYGTKGNK------MGVELRDINLTYG----------------------- 422
           NVKNPIIIDQTYGTK  K        V+ ++I  T                         
Sbjct: 361 NVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTTNVAVLLECSKLFPCEGVELRDI 420

Query: 423 -----GTNLRNTTILSSCMNAKFSTFGVQNPPPCVV 425
                GTNLRNTTI+SSC NAK +TFGVQ PPPCVV
Sbjct: 421 NLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 450

[Close]
BLAST of Cla015078 vs. NCBI nr
Match: gi|659101498|ref|XP_008451635.1| (PREDICTED: exopolygalacturonase-like [Cucumis melo])

HSP 1 Score: 635.2 bits (1637), Expect = 8.3e-179
Identity = 328/459 (71.46%), Postives = 359/459 (78.21%), Query Frame = 1 

Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHSAAAPRPL 60
           MT+TR + LFQILL VF WQCC KV+AI +D+   AN+   IVST NQQL    AAP PL
Sbjct: 1   MTITRDIGLFQILLWVFAWQCCDKVSAITNDI---ANLNYEIVSTINQQLPSPVAAPGPL 60

Query: 61  RIGTLPDIGGTVND-IKANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRNT 120
            I TLPD+   VND I  N DLNGNGG+VF VTKHGAK DGKTDDAQAF+TTWI ACRNT
Sbjct: 61  GIETLPDLDNMVNDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNT 120

Query: 121 VGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITGF 180
           VGPAK LIPEGT+LVGPVT AGPCKSFPITLEN+GTVKATTDI++YSSPEWFSIEDITGF
Sbjct: 121 VGPAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGF 180

Query: 181 ILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSVF 240
           ILTGSGVFDGQG A WPYNDCK +  CQ LPISIKFSRLN TIVD L+S+NSKGFH S+F
Sbjct: 181 ILTGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHMSLF 240

Query: 241 YSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTNV 300
             YNFTATN+NIIAP +SPNTDG+HLSTSKLV I NS+IGTGDDCVSIGHS EKITVTNV
Sbjct: 241 SCYNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTEKITVTNV 300

Query: 301 TCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFEDI 360
           TCGPGHGLSVGSLGKYP+EK V +VLV+ CTIFNATNGARIKT+ASPISG ASGIIFEDI
Sbjct: 301 TCGPGHGLSVGSLGKYPEEKDVYDVLVKNCTIFNATNGARIKTFASPISGSASGIIFEDI 360

Query: 361 VMYNVKNPIIIDQTYGTKGNK------MGVELRDINLTYG-------------------- 420
           VMYNVK PIIIDQTY T  NK        V  ++I  T                      
Sbjct: 361 VMYNVKYPIIIDQTYDTNENKESKWKVSDVHFKNIRGTSATNVAVLLDCSKLLPCEGVEL 420

Query: 421 --------GTNLRNTTILSSCMNAKFSTFGVQNPPPCVV 425
                   GT+L+NTTI+SSC NAK +TFGVQNPPPC V
Sbjct: 421 RDIDLTYGGTDLKNTTIVSSCSNAKITTFGVQNPPPCDV 456

[Close]
BLAST of Cla015078 vs. NCBI nr
Match: gi|449462487|ref|XP_004148972.1| (PREDICTED: exopolygalacturonase-like [Cucumis sativus])

HSP 1 Score: 630.6 bits (1625), Expect = 2.0e-177
Identity = 324/460 (70.43%), Postives = 362/460 (78.70%), Query Frame = 1 

Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHS-AAAPRP 60
           MT++R LSLFQILLLVF WQC  KVAAI  D    AN+ + I+ST NQQL+ S  A P P
Sbjct: 1   MTISRILSLFQILLLVFAWQCYDKVAAIITD--DIANLNNEIISTINQQLIPSPTATPGP 60

Query: 61  LRIGTLPDIGGTVNDIK-ANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRN 120
           L + TLPD+  TVND    N DLN NG +VFDVTKHGAK DGKTDDAQAF TTWIAACRN
Sbjct: 61  LGMETLPDLDDTVNDSNNTNNDLNENGESVFDVTKHGAKADGKTDDAQAFETTWIAACRN 120

Query: 121 TVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITG 180
           TVGP K LIP+GT+LVGP+T AGPCKSFPIT+EN+G VKATTD++EYSSPEWFSIEDITG
Sbjct: 121 TVGPVKILIPKGTYLVGPMTLAGPCKSFPITIENQGIVKATTDLSEYSSPEWFSIEDITG 180

Query: 181 FILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSV 240
           FILTGSGVFDGQG A W YNDCK +K CQ LPISIKFS LNHTIVDG++S+NSKGFH S+
Sbjct: 181 FILTGSGVFDGQGTAVWAYNDCKSNKDCQLLPISIKFSGLNHTIVDGITSLNSKGFHMSL 240

Query: 241 FYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTN 300
           F  YNFT TN+NIIAP  SPNTDG+HLSTS+LV I NS+IGTGDDCVSIGHS  KITVTN
Sbjct: 241 FNCYNFTITNVNIIAPDESPNTDGIHLSTSELVNIMNSIIGTGDDCVSIGHSTVKITVTN 300

Query: 301 VTCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFED 360
           VTCGPGHGLSVGSLGKY +EK V +VLV+ CTIFNATNGARIKT+ASPISG+ASGIIFED
Sbjct: 301 VTCGPGHGLSVGSLGKYSREKDVYDVLVKNCTIFNATNGARIKTFASPISGLASGIIFED 360

Query: 361 IVMYNVKNPIIIDQTYGT------------------KGNKM----------------GVE 420
           I+MYNVK PIIIDQTY T                  +G                   GV 
Sbjct: 361 IIMYNVKYPIIIDQTYSTDENKESKWKVSDVHFKNIRGTSATNVGVLLECSKLLPCEGVV 420

Query: 421 LRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPCVV 425
           L+DINLTYGGT+ +NTTI+SSC+NAK +TFGVQNPPPCVV
Sbjct: 421 LKDINLTYGGTDSKNTTIVSSCLNAKITTFGVQNPPPCVV 458

[Close]
BLAST of Cla015078 vs. NCBI nr
Match: gi|700195561|gb|KGN50738.1| (hypothetical protein Csa_5G222970 [Cucumis sativus])

HSP 1 Score: 630.2 bits (1624), Expect = 2.7e-177
Identity = 318/418 (76.08%), Postives = 339/418 (81.10%), Query Frame = 1 

Query: 41  GIVSTKNQQLLHSAAAPRPLRIGTLPDIGGTVNDIKANVDLNGNGGAVFDVTKHGAKGDG 100
           GIV T N+Q L  A APR L   TLPDIGGTVNDI ANVDLN NGG+VFDVTKHGAK DG
Sbjct: 8   GIVPTTNKQFLRPAEAPRHLGFNTLPDIGGTVNDINANVDLNENGGSVFDVTKHGAKADG 67

Query: 101 KTDDAQAFMTTWIAACRNTVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATT 160
           KTDDAQAFMTTWIAACRNTVGPAKFLIP+GTFLVGPVTFAGPCKS+PITLEN+GTVKATT
Sbjct: 68  KTDDAQAFMTTWIAACRNTVGPAKFLIPQGTFLVGPVTFAGPCKSYPITLENQGTVKATT 127

Query: 161 DITEYSSPEWFSIEDITGFILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNH 220
           DI+ YSSPEWFS+EDITGFILTGSGVFDGQG + WPYNDCKK+  CQ LPISIKF+RLNH
Sbjct: 128 DISAYSSPEWFSLEDITGFILTGSGVFDGQGLSVWPYNDCKKNNLCQLLPISIKFTRLNH 187

Query: 221 TIVDGLSSINSKGFHTSVFYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGT 280
           TIVDGL+SINS GFHTSVFY YNFTATNM IIAP NSPNTDGMHLSTSKLVTI NS+IGT
Sbjct: 188 TIVDGLTSINSMGFHTSVFYCYNFTATNMKIIAPHNSPNTDGMHLSTSKLVTIANSIIGT 247

Query: 281 GDDCVSIGHSCEKITVTNVTCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARI 340
           GDDCVSIGHS E ITVTNVTCGPGHGL   SLGKY KEKGV +VLV+ CTIFNATNGARI
Sbjct: 248 GDDCVSIGHSTENITVTNVTCGPGHGL---SLGKYSKEKGVYDVLVKNCTIFNATNGARI 307

Query: 341 KTWASPISGVASGIIFEDIVMYNVKNPIIIDQTYGTKGNK------MGVELRDINLTYG- 400
           KTWASP+SG+AS IIFEDIVMYNVKNPIIIDQTYGTK  K        V+ ++I  T   
Sbjct: 308 KTWASPVSGLASRIIFEDIVMYNVKNPIIIDQTYGTKKKKESNWKVSNVQFKNIRGTSTT 367

Query: 401 ---------------------------GTNLRNTTILSSCMNAKFSTFGVQNPPPCVV 425
                                      GTNLRNTTI+SSC NAK +TFGVQ PPPCVV
Sbjct: 368 NVAVLLECSKLFPCEGVELRDINLSYGGTNLRNTTIVSSCSNAKIATFGVQKPPPCVV 422

[Close]
BLAST of Cla015078 vs. NCBI nr
Match: gi|700189500|gb|KGN44733.1| (hypothetical protein Csa_7G375750 [Cucumis sativus])

HSP 1 Score: 627.5 bits (1617), Expect = 1.7e-176
Identity = 322/458 (70.31%), Postives = 360/458 (78.60%), Query Frame = 1 

Query: 1   MTMTRSLSLFQILLLVFGWQCCAKVAAIFDDVTGAANVADGIVSTKNQQLLHS-AAAPRP 60
           MT++R LSLFQILLLVF WQC  KVAAI  D    AN+ + I+ST NQQL+ S  A P P
Sbjct: 1   MTISRILSLFQILLLVFAWQCYDKVAAIITD--DIANLNNEIISTINQQLIPSPTATPGP 60

Query: 61  LRIGTLPDIGGTVNDIK-ANVDLNGNGGAVFDVTKHGAKGDGKTDDAQAFMTTWIAACRN 120
           L + TLPD+  TVND    N DLN NG +VFDVTKHGAK DGKTDDAQAF TTWIAACRN
Sbjct: 61  LGMETLPDLDDTVNDSNNTNNDLNENGESVFDVTKHGAKADGKTDDAQAFETTWIAACRN 120

Query: 121 TVGPAKFLIPEGTFLVGPVTFAGPCKSFPITLENRGTVKATTDITEYSSPEWFSIEDITG 180
           TVGP K LIP+GT+LVGP+T AGPCKSFPIT+EN+G VKATTD++EYSSPEWFSIEDITG
Sbjct: 121 TVGPVKILIPKGTYLVGPMTLAGPCKSFPITIENQGIVKATTDLSEYSSPEWFSIEDITG 180

Query: 181 FILTGSGVFDGQGAATWPYNDCKKSKFCQALPISIKFSRLNHTIVDGLSSINSKGFHTSV 240
           FILTGSGVFDGQG A W YNDCK +K CQ LPISIKFS LNHTIVDG++S+NSKGFH S+
Sbjct: 181 FILTGSGVFDGQGTAVWAYNDCKSNKDCQLLPISIKFSGLNHTIVDGITSLNSKGFHMSL 240

Query: 241 FYSYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTITNSVIGTGDDCVSIGHSCEKITVTN 300
           F  YNFT TN+NIIAP  SPNTDG+HLSTS+LV I NS+IGTGDDCVSIGHS  KITVTN
Sbjct: 241 FNCYNFTITNVNIIAPDESPNTDGIHLSTSELVNIMNSIIGTGDDCVSIGHSTVKITVTN 300

Query: 301 VTCGPGHGLSVGSLGKYPKEKGVAEVLVRTCTIFNATNGARIKTWASPISGVASGIIFED 360
           VTCGPGHGLSVGSLGKY +EK V +VLV+ CTIFNATNGARIKT+ASPISG+ASGIIFED
Sbjct: 301 VTCGPGHGLSVGSLGKYSREKDVYDVLVKNCTIFNATNGARIKTFASPISGLASGIIFED 360

Query: 361 IVMYNVKNPIIIDQTYGT------------------KGNKM----------------GVE 420
           I+MYNVK PIIIDQTY T                  +G                   GV 
Sbjct: 361 IIMYNVKYPIIIDQTYSTDENKESKWKVSDVHFKNIRGTSATNVGVLLECSKLLPCEGVV 420

Query: 421 LRDINLTYGGTNLRNTTILSSCMNAKFSTFGVQNPPPC 423
           L+DINLTYGGT+ +NTTI+SSC+NAK +TFGVQNPPPC
Sbjct: 421 LKDINLTYGGTDSKNTTIVSSCLNAKITTFGVQNPPPC 456

The following BLAST results are available for this feature:
BLAST of Cla015078 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PGLR1_ARATH1.8e-8047.35Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana GN=PGA3 PE=2 SV=1[more]
PGLR_TOBAC1.3e-7039.73Polygalacturonase OS=Nicotiana tabacum GN=PG1 PE=2 SV=1[more]
PGLR2_PLAAC3.7e-7041.03Exopolygalacturonase (Fragment) OS=Platanus acerifolia GN=plaa2 PE=1 SV=1[more]
PGLR3_MAIZE3.7e-7043.07Exopolygalacturonase OS=Zea mays GN=PG2C PE=2 SV=1[more]
PGLR2_ARATH8.2e-7042.36Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana GN=At3g07850 PE=2 SV=... [more]
BLAST of Cla015078 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMA6_CUCSA1.9e-17776.08Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222970 PE=3 SV=1[more]
A0A0A0K5G0_CUCSA1.2e-17670.31Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375750 PE=3 SV=1[more]
A0A0A0K5I2_CUCSA2.1e-15275.82Uncharacterized protein OS=Cucumis sativus GN=Csa_7G398220 PE=3 SV=1[more]
W9QFJ0_9ROSA3.2e-10550.64Exopolygalacturonase clone GBGE184 OS=Morus notabilis GN=L484_011125 PE=3 SV=1[more]
A0A0A0K9C4_CUCSA1.2e-9949.73Uncharacterized protein OS=Cucumis sativus GN=Csa_7G404800 PE=3 SV=1[more]
BLAST of Cla015078 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778708423|ref|XP_011656188.1|6.7e-18974.34PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|659101498|ref|XP_008451635.1|8.3e-17971.46PREDICTED: exopolygalacturonase-like [Cucumis melo][more]
gi|449462487|ref|XP_004148972.1|2.0e-17770.43PREDICTED: exopolygalacturonase-like [Cucumis sativus][more]
gi|700195561|gb|KGN50738.1|2.7e-17776.08hypothetical protein Csa_5G222970 [Cucumis sativus][more]
gi|700189500|gb|KGN44733.1|1.7e-17670.31hypothetical protein Csa_7G375750 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000743Glyco_hydro_28
IPR011050Pectin_lyase_fold/virulence
IPR012334Pectin_lyas_fold
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071555 cell wall organization
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005576 extracellular region
molecular_function GO:0004650 polygalacturonase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla015078Cla015078.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000743Glycoside hydrolase, family 28PFAMPF00295Glyco_hydro_28coord: 120..391
score: 3.2
IPR000743Glycoside hydrolase, family 28PROSITEPS00502POLYGALACTURONASEcoord: 298..311
scor
IPR011050Pectin lyase fold/virulence factorunknownSSF51126Pectin lyase-likecoord: 87..423
score: 8.17
IPR012334Pectin lyase foldGENE3DG3DSA:2.160.20.10coord: 61..422
score: 3.8
NoneNo IPR availablePANTHERPTHR31375FAMILY NOT NAMEDcoord: 24..424
score: 1.0E
NoneNo IPR availablePANTHERPTHR31375:SF16SUBFAMILY NOT NAMEDcoord: 24..424
score: 1.0E