Cla014805 (gene) Watermelon (97103) v1

Overview
NameCla014805
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionGuanylate-binding-like protein (AHRD V1 **-* F4ITY5_ARATH); contains Interpro domain(s) IPR015894 Guanylate-binding protein, N-terminal
LocationChr9 : 6180793 .. 6184110 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATTTCATCAAGGGTTTTCGTTTTTTTGATTGTCTGCACCATCCCTTGGAGGGTTCTCGCGATTGAGAATTTCCGGCAAGCGTAAGTCGTTTCAATTCTTTTGGGTTTGGTTTGTTTCGTTTTGAATCTTGTTGGTTGTTGATTTGAATTGGTTTTCGGAGCTCCAGTTTGGATTGCGATCTGTTACTATTGACATTTGAGTTGCGTAGAAGTTTTTTCTTTTCTTTTGTTTATTTTCATGTAATATGTTGTTGATTTCTTGTTACGTAGTGCGCACAGTTGGTCAGTGCCATAGAGGTATAATATCTTACTATTGCCTTCGGGAACATTTCTCTGTTTAAGTTCCGTTTAGAAGGTGTAAGAGCGGGAAAAAGAAAATTACTAGATGATTCATAATTAGAAGATGCTGTATCCCGAACATGAATTCAAGAAAGAAAATTTTGTAATGATATTAAATCCTATCAATTAAGAAATAAATGCATAGAAAAGCTAAAGTTGGTGCAACAGCAACTTAGAGCTTGAATAGAGACTTTTCTATTCCATTTATGTGCTGTTAAGGTACCGGAAAATATCAGGGGATGCCCATCATTTACAAAATTGGCTAGCAAGCCAAGATTGGGTGGGGGATGGGAACTAGAGGATTGAGACAATAATTGTTATTGTGGGGAGATGTTTTTACTTTGAAGTAGATGGGTAGTCTGGGGTTCAGAGAAGAGCTTGTTAGGAAGCATTAGGACGGGAAAAGATAACACCTATTTGGTTTATCTCCAAATTTTTTTTTATGATATAATGTTATTTTAATGCTTAGTAGGTCGTTGTATGCCTACCTAACTTTGTTGTCAGGTTCAAGTATTTTCATAGTTGGGGTATGAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTGATTTTGAATGTGTTTTGTTTGTTTAATTTTGTGTGATTTATTTGTTGGTTCATGAATCATGAGCATTTTCCTAACTTAGTTTTTGAGTAGGTATTAATTTCATGGTAGAGTATAGAGTTAGTTTGATGACATTTATCTTGCAAGATTTTATTTTAGTAAAGAATGATATATTCTAAAAATTTTTATATTATGAACTTAATCGTTAATAATAAATTGGGAAAGTTAAATTTATCAAATAATTGTTTTGGTTAGAAAACAATAATTTAATCTTGTTATATCGTCTTCAATGAATTAATAATGAAGTGCTAATTAATTAAAGTGAGAGAACATTTTAGACTTTCAACAAGGTTCGACTTATGAGACAAATGCCCCTCTCATCTTGAACTAAGCTCTGTGCTCAGCTTACAATAATTTATTCCATACATGTATTGCTAATGTTTTTTGCATGTGTTTTTGTATTTTATTATGAACACATGGATGTATCTCTTGCAAGATTTGATTGGTTGGCCATAATCTTCAAACCTTTAGCATCGGTCTTTTGAGTTTATTTCCTTTGTAAGAAAAGGACTAAAGCTCGTTTTAACCACTTGCAGATTTCCCATTGTGGAACCTGATCCTGGCCATACAAAACTTCGTCTTTCTAGAGAAGGTTTAGAGGCTATTGAAAAAATAACAAATCCAATTGCAGCTGTTGCGGTTAGGCTGCGATGCTCTTCTGTGACATTTAGCACTTTTGGAATTTCCACATCTTAAATGAATGGATATCTTTGAATTGATTCTTGAACCATAATTTTCCCTTGTATTCTTTTTAGTGGAGAAGTTTTCCGGTCTTTTCTGAGGAATGAGTTGTTGATGCAGGGACCATCTTTATGCATATTTTTCTGGTTTCATATGCATGTTTTGTAGTTAAAAAATTAGCGCTTCATGGACCATTACCGGATATACTCAACTTACTTGTAATACTGTCCTTCCTGCAATAAATATTGACAGCTAAGCCTGCATTTTGGAAATGGCTGTAGTTTAAAGAACGCATTGGATATGATTTGCAAGAGTGAGAATGTGAAGAAGAATCTAATCTTAAGTTGCATTTCATGACTATTGCACACTATAATACATGTTTAAGAGTCAAGATAGCTATTATGTTCCATTTTTTTTCTTTGGTTAAATTATAAGTTTTGTTCCCAAACTTTTAGTGTGTCTATTTAGTCCATGTTATTTAAAAAGATTCTAATAGGTCCCTACACTTTTAAGGATATGTTTATTTAGTCCCAATACTTTAGGAATTCTAATAAGCTCTTAAACTTTTAATTTTGTATCAAATTGGTTTTTGCATTAACATTGCAAGTTTAATGCTTATGCTACCAAATGCGTGAACCTGCCCAAGATCAGTTCACCACATTATCCTTAAATAATATAGTCTGGGTGCTAAGTGAATGTTAAACTTACATAGTCATGATAGGATACAAAAATTCAAAGTTGAGAGACTTCTTAGAAATTAAAAATAAAGTATGAAGGCCAAATAAATACCACTTTAAATATTCAGGCTCTATTAGAAGCTTTTTGAAGTGCAGTCATATATAGTCAACCTTGAAAACATGAGAACCAAAGTTGTGATTTAACCTTTTTCTTTTTTTTCTCTCTTTTGTTGCTCTATGGCAACTCTTCTGCTTATTTGTTATCGACCTAATGAACTTCATAGGTTCAAGTTTTGTTTGATAATATATATAGTCTGATTATCATATCTTTTCTTTCATATGATCAGGTCATTGGGCCATACCGATCTGGGAAATCTTTCTTGCTTAACCAACTTCTCTCTCTTTCTTGCTATGAAGGTGCGTTAACTCCTATGAATTTGTACCATTTCTCTTGTTTAAAAATTAATGATCCTGTATATATATCATTTATTGTATAAATCAAATATTTTGTGTTTCAGGGTTTGGTGTAGGACACCTGCGTGACACCAAAACAAAAGGTAAATGCAGTTGCAATGATGTGGTGGTTGTGAATGTGTTATATTTACTCGTTGGGTATTTATGCAGTTTGTCAATTTCTTTTGCACAGGGATCTGGGTATGGGGTACTCCTTTGGAGTTGATGATTGATGGAGTCAAAACTTCTGTTTTTTACCTTGATACAGAGGGTTTTGAAAGTGTTGGAAAGTCAAATGTATATGATGATCGGTAATCTGAATTTGTGAGTCAGTTTTAGGTGGTAATACTTGTTGTTTATTCCCTTTAACCACCTTCCGTTTTGATGCGTGTGCAGGATCTTTGCTTTGGCAACTGTTCTGAGTTCTGTGCTTATCTACAACCTACCTGAGACTGTGAGGCGTCACAGCTTTATATTTTCATCATGTCAATTGTTGCTTTTGCTTGACACCTTGTGA

mRNA sequence

ATGAGAATTTCATCAAGGGTTTTCGTTTTTTTGATTGTCTGCACCATCCCTTGGAGGGTTCTCGCGATTGAGAATTTCCGGCAAGCATTTCCCATTGTGGAACCTGATCCTGGCCATACAAAACTTCGTCTTTCTAGAGAAGGTTTAGAGGCTATTGAAAAAATAACAAATCCAATTGCAGCTGTTGCGGTCATTGGGCCATACCGATCTGGGAAATCTTTCTTGCTTAACCAACTTCTCTCTCTTTCTTGCTATGAAGGGTTTGGTGTAGGACACCTGCGTGACACCAAAACAAAAGGGATCTGGGTATGGGGTACTCCTTTGGAGTTGATGATTGATGGAGTCAAAACTTCTGTTTTTTACCTTGATACAGAGGGTTTTGAAAGTGTTGGAAAGTCAAATGTATATGATGATCGGATCTTTGCTTTGGCAACTGTTCTGAGTTCTGTGCTTATCTACAACCTACCTGAGACTGTGAGGCGTCACAGCTTTATATTTTCATCATGTCAATTGTTGCTTTTGCTTGACACCTTGTGA

Coding sequence (CDS)

ATGAGAATTTCATCAAGGGTTTTCGTTTTTTTGATTGTCTGCACCATCCCTTGGAGGGTTCTCGCGATTGAGAATTTCCGGCAAGCATTTCCCATTGTGGAACCTGATCCTGGCCATACAAAACTTCGTCTTTCTAGAGAAGGTTTAGAGGCTATTGAAAAAATAACAAATCCAATTGCAGCTGTTGCGGTCATTGGGCCATACCGATCTGGGAAATCTTTCTTGCTTAACCAACTTCTCTCTCTTTCTTGCTATGAAGGGTTTGGTGTAGGACACCTGCGTGACACCAAAACAAAAGGGATCTGGGTATGGGGTACTCCTTTGGAGTTGATGATTGATGGAGTCAAAACTTCTGTTTTTTACCTTGATACAGAGGGTTTTGAAAGTGTTGGAAAGTCAAATGTATATGATGATCGGATCTTTGCTTTGGCAACTGTTCTGAGTTCTGTGCTTATCTACAACCTACCTGAGACTGTGAGGCGTCACAGCTTTATATTTTCATCATGTCAATTGTTGCTTTTGCTTGACACCTTGTGA

Protein sequence

MRISSRVFVFLIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVFYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVRRHSFIFSSCQLLLLLDTL
Homology
[Close]
BLAST of Cla014805 vs. Swiss-Prot
Match: GBP4_HUMAN (Guanylate-binding protein 4 OS=Homo sapiens GN=GBP4 PE=2 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16
Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 1 

Query: 31  PIVEPDPGHTKLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGV 90
           PI   +    +L ++ + LE ++KI+ P+  VA++G YR+GKS+L+N+L       GF +
Sbjct: 25  PICLVENQEEQLTVNSKALEILDKISQPVVVVAIVGLYRTGKSYLMNRLAGKR--NGFPL 84

Query: 91  GHLRDTKTKGIWVWGTPLELMIDGVKTSVFYLDTEGFESVGKSNVYDDR-IFALATVLSS 150
           G    ++TKGIW+W  P    +     ++  LDTEG   V KSN  +D  IFALA +LSS
Sbjct: 85  GSTVQSETKGIWMWCVP---HLSKPNHTLVLLDTEGLGDVEKSNPKNDSWIFALAVLLSS 144

Query: 151 VLIYNLPETVRRHS 164
             +YN   T+   +
Sbjct: 145 SFVYNSVSTINHQA 153

[Close]
BLAST of Cla014805 vs. Swiss-Prot
Match: GBP5_HUMAN (Guanylate-binding protein 5 OS=Homo sapiens GN=GBP5 PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15
Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 1 

Query: 41  KLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKG 100
           +L++++E LE +  IT P+  VA++G YR+GKS+L+N+L   +  +GF V     + TKG
Sbjct: 20  QLKVNQEALEILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKN--KGFSVASTVQSHTKG 79

Query: 101 IWVWGTPLELMIDGVKTSVFYLDTEGFESVGKS-NVYDDRIFALATVLSSVLIYN 155
           IW+W  P     +    ++  LDTEG   V K+ N  D +IFALA +LSS  +YN
Sbjct: 80  IWIWCVPHP---NWPNHTLVLLDTEGLGDVEKADNKNDIQIFALALLLSSTFVYN 129

[Close]
BLAST of Cla014805 vs. Swiss-Prot
Match: GBP6_PONAB (Guanylate-binding protein 6 OS=Pongo abelii GN=GBP6 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.2e-15
Identity = 47/134 (35.07%), Postives = 74/134 (55.22%), Query Frame = 1 

Query: 31  PIVEPDPGHTKLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGV 90
           PI   +  + +L ++++ ++ +EKI+ P+  VA++G YR+GKS+L+N L   +   GF +
Sbjct: 10  PICLVENNNEQLLVNQQAIQILEKISQPVVVVAIVGLYRTGKSYLMNHLAGQN--HGFPL 69

Query: 91  GHLRDTKTKGIWVWGTPLELMIDGVKTSVFYLDTEGFESVGKSNVYDDR-IFALATVLSS 150
           G    ++TKGIW+W  P          ++  LDTEG   V K +  +D  IFALA +L S
Sbjct: 70  GSTVQSETKGIWMWCVPHP---SKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCS 129

Query: 151 VLIYNLPETVRRHS 164
             IYN   T+   +
Sbjct: 130 TFIYNSMSTINHQA 138

[Close]
BLAST of Cla014805 vs. Swiss-Prot
Match: GBP1_MOUSE (Guanylate-binding protein 1 OS=Mus musculus GN=Gbp1 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.1e-15
Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 

Query: 41  KLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKG 100
           +L +++E L  +  IT P+  VA++G YR+GKS+L+N+L       GF +G    + TKG
Sbjct: 20  QLVINQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKR--TGFSLGSTVQSHTKG 79

Query: 101 IWVWGTPLELMIDGVKTSVFYLDTEGFESVGK-SNVYDDRIFALATVLSSVLIYNLPETV 160
           IW+W  P          ++  LDTEG E V K  N  D  IFALA +LSS  IYN   T+
Sbjct: 80  IWMWCVPHP---KKAGQTLVLLDTEGLEDVEKGDNQNDCWIFALAVLLSSTFIYNSIGTI 138

Query: 161 RRHS 164
            + +
Sbjct: 140 NQQA 138

[Close]
BLAST of Cla014805 vs. Swiss-Prot
Match: GBP2_MOUSE (Guanylate-binding protein 1 OS=Mus musculus GN=Gbp2 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 7.1e-15
Identity = 49/124 (39.52%), Postives = 68/124 (54.84%), Query Frame = 1 

Query: 41  KLRLSREGLEAIEKITNPIAAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKG 100
           +L +++E L  +  IT P+  VA++G YR+GKS+L+N+L       GF +G    + TKG
Sbjct: 20  QLVINQEALRILSAITQPVVVVAIVGLYRTGKSYLMNKLAGKR--TGFSLGSTVQSHTKG 79

Query: 101 IWVWGTPLELMIDGVKTSVFYLDTEGFESVGK-SNVYDDRIFALATVLSSVLIYNLPETV 160
           IW+W  P          ++  LDTEG E V K  N  D  IFALA +LSS  IYN   T+
Sbjct: 80  IWMWCVPHP---KKAGQTLVLLDTEGLEDVEKGDNQNDCWIFALAVLLSSTFIYNSIGTI 138

Query: 161 RRHS 164
            + +
Sbjct: 140 NQQA 138

[Close]
BLAST of Cla014805 vs. TrEMBL
Match: A0A0A0K8R7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378560 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.2e-82
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 1 

Query: 1   MRISSRVFVFLIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA 60
           MRISSRVFVF IVC IPWR+LAIENF+QAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA
Sbjct: 26  MRISSRVFVFFIVCAIPWRILAIENFQQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA 85

Query: 61  AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVF 120
           AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGV TSVF
Sbjct: 86  AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVNTSVF 145

Query: 121 YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPET+R
Sbjct: 146 YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETIR 185

[Close]
BLAST of Cla014805 vs. TrEMBL
Match: M4C7C2_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.1e-70
Identity = 136/161 (84.47%), Postives = 146/161 (90.68%), Query Frame = 1 

Query: 1   MRISSRVFVFLI-VCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPI 60
           M IS R FVFL+ +C +    L+IENF QAFPIVEPDP HTKLRLSREGLEAI +IT PI
Sbjct: 1   MEISHRTFVFLLSLCLLLQTSLSIENFHQAFPIVEPDPNHTKLRLSREGLEAISRITTPI 60

Query: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSV 120
           AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTPLE+ IDGVKTS+
Sbjct: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPLEIEIDGVKTSI 120

Query: 121 FYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
            YLDTEGFESVGKSNVYDDRIFALATV+SSVLIYNLPET+R
Sbjct: 121 IYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETIR 161

[Close]
BLAST of Cla014805 vs. TrEMBL
Match: A0A078FJ06_BRANA (BnaC03g21700D protein OS=Brassica napus GN=BnaC03g21700D PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-70
Identity = 136/161 (84.47%), Postives = 145/161 (90.06%), Query Frame = 1 

Query: 1   MRISSRVFVFLI-VCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPI 60
           M IS R F FL+ +C +    L+IENF QAFPIVEPDP HTKLRLSREGLEAI +IT PI
Sbjct: 1   MEISHRTFAFLLSLCLLLQTSLSIENFHQAFPIVEPDPNHTKLRLSREGLEAISRITTPI 60

Query: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSV 120
           AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTPLEL IDGVKTS+
Sbjct: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSI 120

Query: 121 FYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
            YLDTEGFESVGKSNVYDDRIFALATV+SSVLIYNLPET+R
Sbjct: 121 IYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETIR 161

[Close]
BLAST of Cla014805 vs. TrEMBL
Match: A0A0D3B5R3_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-70
Identity = 136/161 (84.47%), Postives = 145/161 (90.06%), Query Frame = 1 

Query: 1   MRISSRVFVFLI-VCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPI 60
           M IS R F FL+ +C +    L+IENF QAFPIVEPDP HTKLRLSREGLEAI +IT PI
Sbjct: 1   MEISHRTFAFLLSLCLLLQTSLSIENFHQAFPIVEPDPNHTKLRLSREGLEAISRITTPI 60

Query: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSV 120
           AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTPLEL IDGVKTS+
Sbjct: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPLELEIDGVKTSI 120

Query: 121 FYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
            YLDTEGFESVGKSNVYDDRIFALATV+SSVLIYNLPET+R
Sbjct: 121 IYLDTEGFESVGKSNVYDDRIFALATVMSSVLIYNLPETIR 161

[Close]
BLAST of Cla014805 vs. TrEMBL
Match: A0A124SFP5_CYNCS (Guanylate-binding protein, C-terminal OS=Cynara cardunculus var. scolymus GN=Ccrd_017805 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-70
Identity = 131/154 (85.06%), Postives = 145/154 (94.16%), Query Frame = 1 

Query: 7   VFVFLIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIAAVAVIG 66
           +F+FL V   P+ V AI++F QAFPI+EPDPGHTKLR+SREGLEAI +ITNPIAAVAVIG
Sbjct: 11  LFIFLCVSPSPFGVFAIDDFNQAFPIIEPDPGHTKLRISREGLEAISRITNPIAAVAVIG 70

Query: 67  PYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVFYLDTEG 126
           PYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTP+E+ I+GVKTSVFYLDTEG
Sbjct: 71  PYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPVEMDINGVKTSVFYLDTEG 130

Query: 127 FESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           FES+GKSNVYDDRIFALATVLSSVLIYNLPET+R
Sbjct: 131 FESIGKSNVYDDRIFALATVLSSVLIYNLPETIR 164

[Close]
BLAST of Cla014805 vs. NCBI nr
Match: gi|659100788|ref|XP_008451265.1| (PREDICTED: guanylate-binding protein 4 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 9.4e-84
Identity = 157/160 (98.12%), Postives = 159/160 (99.38%), Query Frame = 1 

Query: 1   MRISSRVFVFLIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA 60
           MRISSRVFVFLIVC IPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIE+ITNPIA
Sbjct: 1   MRISSRVFVFLIVCAIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIERITNPIA 60

Query: 61  AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVF 120
           AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVF
Sbjct: 61  AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVF 120

Query: 121 YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPET+R
Sbjct: 121 YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETIR 160

[Close]
BLAST of Cla014805 vs. NCBI nr
Match: gi|449458450|ref|XP_004146960.1| (PREDICTED: guanylate-binding protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 1.8e-82
Identity = 154/160 (96.25%), Postives = 157/160 (98.12%), Query Frame = 1 

Query: 1   MRISSRVFVFLIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA 60
           MRISSRVFVF IVC IPWR+LAIENF+QAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA
Sbjct: 26  MRISSRVFVFFIVCAIPWRILAIENFQQAFPIVEPDPGHTKLRLSREGLEAIEKITNPIA 85

Query: 61  AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSVF 120
           AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGV TSVF
Sbjct: 86  AVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVNTSVF 145

Query: 121 YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPET+R
Sbjct: 146 YLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETIR 185

[Close]
BLAST of Cla014805 vs. NCBI nr
Match: gi|657954584|ref|XP_008368617.1| (PREDICTED: LOW QUALITY PROTEIN: interferon-induced guanylate-binding protein 1-like [Malus domestica])

HSP 1 Score: 282.3 bits (721), Expect = 5.7e-73
Identity = 141/161 (87.58%), Postives = 150/161 (93.17%), Query Frame = 1 

Query: 1   MRISSRVFVF-LIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPI 60
           M IS+ VFVF ++VC      LAIENF QAFPIVEPDPGHTKLRLSREGLEAIE+ITNPI
Sbjct: 8   MAISNWVFVFSIVVCFFASGSLAIENFHQAFPIVEPDPGHTKLRLSREGLEAIERITNPI 67

Query: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSV 120
           AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTP+EL IDGVKTSV
Sbjct: 68  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPIELDIDGVKTSV 127

Query: 121 FYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           FYLDTEGFESVGKSNVYDDRIFALATV+SSVL+YNLPET+R
Sbjct: 128 FYLDTEGFESVGKSNVYDDRIFALATVMSSVLVYNLPETIR 168

[Close]
BLAST of Cla014805 vs. NCBI nr
Match: gi|694390331|ref|XP_009370738.1| (PREDICTED: guanylate-binding protein 5 [Pyrus x bretschneideri])

HSP 1 Score: 279.6 bits (714), Expect = 3.7e-72
Identity = 140/161 (86.96%), Postives = 149/161 (92.55%), Query Frame = 1 

Query: 1   MRISSRVFVF-LIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPI 60
           M +S+ VFVF ++VC      LAIENF QAFPIVEPDPGHTKLRLSREGLEAIE ITNPI
Sbjct: 8   MAMSNWVFVFSIVVCFFASGSLAIENFHQAFPIVEPDPGHTKLRLSREGLEAIEGITNPI 67

Query: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSV 120
           AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTP+EL IDGVKTSV
Sbjct: 68  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPIELDIDGVKTSV 127

Query: 121 FYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           FYLDTEGFESVGKSNVYDDRIFALATV+SSVL+YNLPET+R
Sbjct: 128 FYLDTEGFESVGKSNVYDDRIFALATVMSSVLVYNLPETIR 168

[Close]
BLAST of Cla014805 vs. NCBI nr
Match: gi|657988460|ref|XP_008386402.1| (PREDICTED: guanylate-binding protein 4-like [Malus domestica])

HSP 1 Score: 278.9 bits (712), Expect = 6.3e-72
Identity = 140/161 (86.96%), Postives = 149/161 (92.55%), Query Frame = 1 

Query: 1   MRISSRVFVF-LIVCTIPWRVLAIENFRQAFPIVEPDPGHTKLRLSREGLEAIEKITNPI 60
           M IS+ VFVF ++VC      LAIENF QAFPIVEPDPGHTKLRLSREGLEAIE+ITNPI
Sbjct: 12  MTISNWVFVFSIVVCFFASWSLAIENFHQAFPIVEPDPGHTKLRLSREGLEAIERITNPI 71

Query: 61  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHLRDTKTKGIWVWGTPLELMIDGVKTSV 120
           AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGH+RDTKTKGIWVWGTP+EL IDGVKTSV
Sbjct: 72  AAVAVIGPYRSGKSFLLNQLLSLSCYEGFGVGHMRDTKTKGIWVWGTPIELDIDGVKTSV 131

Query: 121 FYLDTEGFESVGKSNVYDDRIFALATVLSSVLIYNLPETVR 161
           FYLDTEGFESVGKSNVYDDRIFALATV+SSVL+YNL ET+R
Sbjct: 132 FYLDTEGFESVGKSNVYDDRIFALATVMSSVLVYNLAETIR 172

The following BLAST results are available for this feature:
BLAST of Cla014805 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GBP4_HUMAN2.2e-1637.31Guanylate-binding protein 4 OS=Homo sapiens GN=GBP4 PE=2 SV=2[more]
GBP5_HUMAN1.4e-1540.87Guanylate-binding protein 5 OS=Homo sapiens GN=GBP5 PE=1 SV=1[more]
GBP6_PONAB4.2e-1535.07Guanylate-binding protein 6 OS=Pongo abelii GN=GBP6 PE=2 SV=1[more]
GBP1_MOUSE7.1e-1539.52Guanylate-binding protein 1 OS=Mus musculus GN=Gbp1 PE=1 SV=1[more]
GBP2_MOUSE7.1e-1539.52Guanylate-binding protein 1 OS=Mus musculus GN=Gbp2 PE=1 SV=1[more]
BLAST of Cla014805 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8R7_CUCSA1.2e-8296.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378560 PE=4 SV=1[more]
M4C7C2_BRARP1.1e-7084.47Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078FJ06_BRANA1.8e-7084.47BnaC03g21700D protein OS=Brassica napus GN=BnaC03g21700D PE=4 SV=1[more]
A0A0D3B5R3_BRAOL1.8e-7084.47Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
A0A124SFP5_CYNCS1.8e-7085.06Guanylate-binding protein, C-terminal OS=Cynara cardunculus var. scolymus GN=Ccr... [more]
BLAST of Cla014805 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100788|ref|XP_008451265.1|9.4e-8498.13PREDICTED: guanylate-binding protein 4 [Cucumis melo][more]
gi|449458450|ref|XP_004146960.1|1.8e-8296.25PREDICTED: guanylate-binding protein 5 isoform X1 [Cucumis sativus][more]
gi|657954584|ref|XP_008368617.1|5.7e-7387.58PREDICTED: LOW QUALITY PROTEIN: interferon-induced guanylate-binding protein 1-l... [more]
gi|694390331|ref|XP_009370738.1|3.7e-7286.96PREDICTED: guanylate-binding protein 5 [Pyrus x bretschneideri][more]
gi|657988460|ref|XP_008386402.1|6.3e-7286.96PREDICTED: guanylate-binding protein 4-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR015894Guanylate-bd_N
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla014805Cla014805.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015894Guanylate-binding protein, N-terminalPFAMPF02263GBPcoord: 41..161
score: 2.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 28..161
score: 9.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 27..159
score: 2.93
NoneNo IPR availablePANTHERPTHR10751GUANYLATE BINDING PROTEINcoord: 7..160
score: 1.4E
NoneNo IPR availablePANTHERPTHR10751:SF38GUANYLATE-BINDING FAMILY PROTEINcoord: 7..160
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cla014805MELO3C015756Melon (DHL92) v3.5.1mewmB190
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cla014805Cucumber (Chinese Long) v3cucwmB119
Cla014805Cucumber (Chinese Long) v3cucwmB200
Cla014805Cucumber (Chinese Long) v3cucwmB592
Cla014805Watermelon (97103) v2wmwmbB018
Cla014805Watermelon (97103) v2wmwmbB026
Cla014805Watermelon (97103) v2wmwmbB028
Cla014805Watermelon (97103) v2wmwmbB036
Cla014805Watermelon (97103) v2wmwmbB041
Cla014805Wax gourdwgowmB119
Cla014805Wax gourdwgowmB260
Cla014805Wax gourdwgowmB580
Cla014805Watermelon (97103) v1wmwmB017
Cla014805Watermelon (97103) v1wmwmB021
Cla014805Watermelon (97103) v1wmwmB029
Cla014805Watermelon (97103) v1wmwmB033
Cla014805Cucurbita moschata (Rifu)cmowmB840
Cla014805Cucurbita moschata (Rifu)cmowmB843
Cla014805Cucumber (Gy14) v1cgywmB220
Cla014805Cucumber (Gy14) v1cgywmB472
Cla014805Cucumber (Gy14) v1cgywmB702
Cla014805Cucurbita maxima (Rimu)cmawmB147
Cla014805Cucurbita maxima (Rimu)cmawmB328
Cla014805Cucurbita maxima (Rimu)cmawmB333
Cla014805Cucurbita maxima (Rimu)cmawmB778
Cla014805Cucurbita maxima (Rimu)cmawmB852
Cla014805Cucurbita maxima (Rimu)cmawmB856
Cla014805Cucurbita moschata (Rifu)cmowmB132
Cla014805Cucurbita moschata (Rifu)cmowmB322
Cla014805Wild cucumber (PI 183967)cpiwmB111
Cla014805Wild cucumber (PI 183967)cpiwmB189
Cla014805Wild cucumber (PI 183967)cpiwmB586
Cla014805Melon (DHL92) v3.5.1mewmB393
Cla014805Melon (DHL92) v3.5.1mewmB445
Cla014805Watermelon (Charleston Gray)wcgwmB007
Cla014805Watermelon (Charleston Gray)wcgwmB174
Cla014805Watermelon (Charleston Gray)wcgwmB271
Cla014805Watermelon (Charleston Gray)wcgwmB315
Cla014805Watermelon (Charleston Gray)wcgwmB354
Cla014805Cucumber (Chinese Long) v2cuwmB106
Cla014805Cucumber (Chinese Long) v2cuwmB189
Cla014805Cucumber (Chinese Long) v2cuwmB567
Cla014805Cucurbita pepo (Zucchini)cpewmB131
Cla014805Cucurbita pepo (Zucchini)cpewmB311
Cla014805Cucurbita pepo (Zucchini)cpewmB314
Cla014805Cucurbita pepo (Zucchini)cpewmB321
Cla014805Cucurbita pepo (Zucchini)cpewmB688
Cla014805Cucurbita pepo (Zucchini)cpewmB823
Cla014805Bottle gourd (USVL1VR-Ls)lsiwmB007
Cla014805Bottle gourd (USVL1VR-Ls)lsiwmB090
Cla014805Bottle gourd (USVL1VR-Ls)lsiwmB175
Cla014805Bottle gourd (USVL1VR-Ls)lsiwmB345
Cla014805Cucumber (Gy14) v2cgybwmB104
Cla014805Cucumber (Gy14) v2cgybwmB179
Cla014805Cucumber (Gy14) v2cgybwmB529
Cla014805Melon (DHL92) v3.6.1medwmB186
Cla014805Silver-seed gourdcarwmB0106
Cla014805Silver-seed gourdcarwmB0215
Cla014805Silver-seed gourdcarwmB0959
Cla014805Silver-seed gourdcarwmB0987
Cla014805Silver-seed gourdcarwmB0988