Cla014335 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla014335
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	CM0216.240.nc protein (AHRD V1 ***- B0BLH5_LOTJA); contains Interpro domain(s) IPR004320 Protein of unknown function DUF241, plant
Location	Chr1 : 30070977 .. 30071834 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCAAATACCATGGGAGGTCAATTAGCTTACCTTCTAGATCACATCCATGTACTGTGAAGGTTGAGGAGGAGTTGAGGAAGGTGAAGACATGGGTGTCTTCTTCTTCTTCTTCTTCTGTTTGTGGTGCTCTTTTGGGATTACAAGATTTGTATGATTCCATTGATGAGCTTCTCAAAATGGGGTCTACCCAGAAGGTTTTGTCTTGTCCCCAACATAAACAGTTGGTGGAGGAGTTGTTAGATGGTTCTATGAAGCTTTTGGATGTTTGCAGCTTAGCAAAGGACATGACATTGGAAACCCAACAACATGTTGGGGCTCTTCATTCTGCCGTTCGCCGGAGGAAAGGCTATTCCGCTATTAAAACTACCACCGCTGCTTACATTTGTTACAGAAAAAGGATGAAGAAAGAAGCTAAAAAGTTAATAACATCAATGAAGAAGATGAATGAGAAATTCAATTCAATCTCAATGGAAAATCTGGATCATCACCTGAGCTCTGTGATTGGTGCGTTATCACAAGCTTGTTCAACCAACAGCTCCATCTTCGAATCCGTGTTGTTGTACTTGACGCCATTGATGAAATCAAAAGCTCGAGGATGGTCTCTGGTTTCCAAGTGGGTGCACAAGGGGGCGATTGCCTGCGAATCAAACAGTGGCTTGAACGAATTTGAGAATGTGGATGTGGCTTTGAGCTCTGTTCATGAAGAAATGGAGGTTGAGAAGTCGCAAATTGCTCAAAAAAGATTGGAGAGTTTGGAAATGGCAGCACAAGAAATTGAGAGTGGCTTGGATGGTTTGTTCAGGAGATTGATCAAAACAAGAGCTTCTCTGTTAAACATAATCTCTCAATAG

mRNA sequence

ATGGCTACCAAATACCATGGGAGGTCAATTAGCTTACCTTCTAGATCACATCCATGTACTGTGAAGGTTGAGGAGGAGTTGAGGAAGGTGAAGACATGGGTGTCTTCTTCTTCTTCTTCTTCTGTTTGTGGTGCTCTTTTGGGATTACAAGATTTGTATGATTCCATTGATGAGCTTCTCAAAATGGGGTCTACCCAGAAGGTTTTGTCTTGTCCCCAACATAAACAGTTGGTGGAGGAGTTGTTAGATGGTTCTATGAAGCTTTTGGATGTTTGCAGCTTAGCAAAGGACATGACATTGGAAACCCAACAACATGTTGGGGCTCTTCATTCTGCCGTTCGCCGGAGGAAAGGCTATTCCGCTATTAAAACTACCACCGCTGCTTACATTTGTTACAGAAAAAGGATGAAGAAAGAAGCTAAAAAGTTAATAACATCAATGAAGAAGATGAATGAGAAATTCAATTCAATCTCAATGGAAAATCTGGATCATCACCTGAGCTCTGTGATTGGTGCGTTATCACAAGCTTGTTCAACCAACAGCTCCATCTTCGAATCCGTGTTGTTGTACTTGACGCCATTGATGAAATCAAAAGCTCGAGGATGGTCTCTGGTTTCCAAGTGGGTGCACAAGGGGGCGATTGCCTGCGAATCAAACAGTGGCTTGAACGAATTTGAGAATGTGGATGTGGCTTTGAGCTCTGTTCATGAAGAAATGGAGGTTGAGAAGTCGCAAATTGCTCAAAAAAGATTGGAGAGTTTGGAAATGGCAGCACAAGAAATTGAGAGTGGCTTGGATGGTTTGTTCAGGAGATTGATCAAAACAAGAGCTTCTCTGTTAAACATAATCTCTCAATAG

Coding sequence (CDS)

ATGGCTACCAAATACCATGGGAGGTCAATTAGCTTACCTTCTAGATCACATCCATGTACTGTGAAGGTTGAGGAGGAGTTGAGGAAGGTGAAGACATGGGTGTCTTCTTCTTCTTCTTCTTCTGTTTGTGGTGCTCTTTTGGGATTACAAGATTTGTATGATTCCATTGATGAGCTTCTCAAAATGGGGTCTACCCAGAAGGTTTTGTCTTGTCCCCAACATAAACAGTTGGTGGAGGAGTTGTTAGATGGTTCTATGAAGCTTTTGGATGTTTGCAGCTTAGCAAAGGACATGACATTGGAAACCCAACAACATGTTGGGGCTCTTCATTCTGCCGTTCGCCGGAGGAAAGGCTATTCCGCTATTAAAACTACCACCGCTGCTTACATTTGTTACAGAAAAAGGATGAAGAAAGAAGCTAAAAAGTTAATAACATCAATGAAGAAGATGAATGAGAAATTCAATTCAATCTCAATGGAAAATCTGGATCATCACCTGAGCTCTGTGATTGGTGCGTTATCACAAGCTTGTTCAACCAACAGCTCCATCTTCGAATCCGTGTTGTTGTACTTGACGCCATTGATGAAATCAAAAGCTCGAGGATGGTCTCTGGTTTCCAAGTGGGTGCACAAGGGGGCGATTGCCTGCGAATCAAACAGTGGCTTGAACGAATTTGAGAATGTGGATGTGGCTTTGAGCTCTGTTCATGAAGAAATGGAGGTTGAGAAGTCGCAAATTGCTCAAAAAAGATTGGAGAGTTTGGAAATGGCAGCACAAGAAATTGAGAGTGGCTTGGATGGTTTGTTCAGGAGATTGATCAAAACAAGAGCTTCTCTGTTAAACATAATCTCTCAATAG

Protein sequence

MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSSSVCGALLGLQDLYDSIDELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRKGYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQACSTNSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSVHEEMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ

Homology

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BLAST of Cla014335 vs. TrEMBL
Match: A0A0A0KGU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507480 PE=4 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.7e-138
Identity = 259/288 (89.93%), Postives = 269/288 (93.40%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSS---SSSSSVCGALLGLQDLYDSID 60
           MATKYH RSISLPSRSHP T+KVEEEL KVKTWVSS   SSSSSVCG LLGLQDLYDSID
Sbjct: 1   MATKYHARSISLPSRSHPSTLKVEEELAKVKTWVSSTTSSSSSSVCGGLLGLQDLYDSID 60

Query: 61  ELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRK 120
           ELLKMGSTQKVLSCPQHKQ VEELLDGSMKLLDVCSLAK++TLETQQHVGALHSAVRRRK
Sbjct: 61  ELLKMGSTQKVLSCPQHKQFVEELLDGSMKLLDVCSLAKEVTLETQQHVGALHSAVRRRK 120

Query: 121 GYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQAC 180
           G SA+KT T AY CYRKRMKKEAKKLITSMKKMNEKFN+  MEN DHHLSSVIGAL QAC
Sbjct: 121 GDSAVKTATVAYNCYRKRMKKEAKKLITSMKKMNEKFNTTPMENPDHHLSSVIGALRQAC 180

Query: 181 STNSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSVHE 240
           STN+ IFESVL+YLTPL KSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSV +
Sbjct: 181 STNNLIFESVLVYLTPLTKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSVVQ 240

Query: 241 EMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
           EMEVEKSQIAQKRLESLEMAAQEIESGLDG+FRRLIKTRAS+LNIISQ
Sbjct: 241 EMEVEKSQIAQKRLESLEMAAQEIESGLDGVFRRLIKTRASMLNIISQ 288

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BLAST of Cla014335 vs. TrEMBL
Match: M5VXA1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026133mg PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 1.4e-80
Identity = 162/297 (54.55%), Postives = 221/297 (74.41%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSS---SVCGALLGLQDLYDSID 60
           MA KYH RSISLPSRSHP T++VEEEL +++ W +SSS+S   S+C AL GL++LY+ +D
Sbjct: 1   MAAKYHVRSISLPSRSHPTTLRVEEELSRLQAWEASSSASTSDSICRALCGLEELYECVD 60

Query: 61  ELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRK 120
           +LL M STQ++LS PQ ++ + ELLDGS++LLD+C + KD   + ++H  AL SA+RRRK
Sbjct: 61  DLLHMASTQQLLSQPQQEKYMNELLDGSVRLLDICGITKDAISQIKEHARALQSALRRRK 120

Query: 121 GYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQAC 180
           G S+I+T  A Y C+RK+MKKEAKKLITS+K+++ K  +  M   D HLS+VI  L +AC
Sbjct: 121 GDSSIETGIANYTCFRKKMKKEAKKLITSLKQVDSKIGASQMVEQDQHLSAVIRVLREAC 180

Query: 181 STNSSIFESVLLYLT-PLMKSKARGWSLVSKWVHKGAIACE-SNSGLNEFENVDVALSSV 240
           S N SIF+S+L++L+ P+ K K+  WSLVSK++HKG IACE     +NE + VD AL+++
Sbjct: 181 SNNMSIFQSLLVFLSVPVSKPKSNKWSLVSKFMHKGVIACEGQKEDINEMDGVDAALNTL 240

Query: 241 H-------EEMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
                   E  +VEK Q AQKRLE+LE+  + ++SGL+ +FRRLIKTRASLLNIISQ
Sbjct: 241 RKSSAAPIECTDVEKIQSAQKRLEALEVTIEGLDSGLESVFRRLIKTRASLLNIISQ 297

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BLAST of Cla014335 vs. TrEMBL
Match: U5GEW5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10660g PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73
Identity = 152/288 (52.78%), Postives = 209/288 (72.57%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWV--SSSSSSSVCGALLGLQDLYDSIDE 60
           MA KYH RSISLPSRSHP T ++EEEL K+K W   S+S+S S+C  L GL+DLY  +D+
Sbjct: 1   MACKYHVRSISLPSRSHPTTQRIEEELNKLKAWEVSSNSTSGSICNGLSGLEDLYKCMDD 60

Query: 61  LLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRKG 120
           LL + STQ+VLS  ++++ ++ELLDGS++LLDVCS+ +D+ L  ++ V AL SA RRRKG
Sbjct: 61  LLNLASTQQVLSRYENEKCLDELLDGSVRLLDVCSIGRDILLRFREQVQALQSAFRRRKG 120

Query: 121 YSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQACS 180
            S+I+++ A + C+RK+MKK+AKKLI S+K+M+ K  + S+ + D HLS+VI  + +   
Sbjct: 121 DSSIESSVATFTCFRKKMKKDAKKLIASLKQMDNKLGASSLLDQDQHLSAVIRVIREVNV 180

Query: 181 TNSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIAC-ESNSGLNEFENVDVALSSVHE 240
            N SIF+S+L++L+   K     WSLVSK +HKG IAC E    +NE E VD ALS V +
Sbjct: 181 INCSIFQSLLMFLSKSSKPNQSRWSLVSKLMHKGVIACEEKQENVNEIETVDAALSEVSD 240

Query: 241 EMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
               EK +IAQKRLE+LEM+  ++E+ L+ L R LIK+RASLLNIISQ
Sbjct: 241 S---EKVKIAQKRLEALEMSIDDLENCLERLSRPLIKSRASLLNIISQ 285

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BLAST of Cla014335 vs. TrEMBL
Match: A0A061DGD3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000101 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.1e-72
Identity = 145/288 (50.35%), Postives = 204/288 (70.83%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSS--SSSSSVCGALLGLQDLYDSIDE 60
           MA KYH RSISLPSRSHP T+++E+EL ++KTW +S  S+S S+C  L GL+DLY  +D+
Sbjct: 1   MAAKYHVRSISLPSRSHPTTLRIEDELNRLKTWEASPLSTSESICAGLSGLEDLYQCMDD 60

Query: 61  LLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRKG 120
           LL + STQ+VLS  QH++ ++ELLDGS++LLD+CS+A+D   + ++ V AL SA+RRRK 
Sbjct: 61  LLNLASTQQVLSQHQHEKCIDELLDGSVRLLDICSIARDYMFQLKERVHALQSALRRRKR 120

Query: 121 YSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQACS 180
            S+I+     Y C+RK MKK+ KKLIT +K+M+ K  +  + + DHH S+VI  L +  +
Sbjct: 121 DSSIENDIINYTCFRKEMKKQGKKLITELKQMDNKLGASPLLDQDHHFSAVIRVLREVNA 180

Query: 181 TNSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIAC-ESNSGLNEFENVDVALSSVHE 240
            N+SIF+S+  +L+ L+ SK   WSLVSK +HKG I+C E    +NE E+VD AL     
Sbjct: 181 MNTSIFQSLFSFLSALVSSKQTRWSLVSKLMHKGVISCEEKQENVNELESVDAAL--CRH 240

Query: 241 EMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
             +VEK QIA KRL +LE + + +E+ L+ +FR LIK R SLLNI+SQ
Sbjct: 241 TSDVEKMQIAHKRLVALESSIEGLENRLECVFRHLIKARTSLLNIVSQ 286

[Close]

BLAST of Cla014335 vs. TrEMBL
Match: B9H694_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10650g PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 5.6e-69
Identity = 143/285 (50.18%), Postives = 202/285 (70.88%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSSSVCGALLGLQDLYDSIDELL 60
           M+ KY  RS+SLPSRSHP T+ VEEEL K+K W + S+S S+C  LLG++DLY  +DE L
Sbjct: 1   MSGKYRVRSVSLPSRSHPTTLTVEEELNKLKAWEALSTSGSICNGLLGVEDLYKYVDEFL 60

Query: 61  KMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRKGYS 120
            + STQ+VLS  ++ +   ELLDGS++LLDVCS+A+D  L  ++ + AL SA+RRRKG S
Sbjct: 61  NLASTQEVLSRHENGKCHNELLDGSVRLLDVCSIARDTMLRFKEQIQALQSALRRRKGDS 120

Query: 121 AIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQACSTN 180
           +I+++ A + C+RK+MKK+AKKLI S+K+M+ K  + S+ + D HLS+VI  + +    N
Sbjct: 121 SIESSVATFTCFRKKMKKDAKKLIASLKQMDNKLGASSLLDQDQHLSAVIKVIREVNVIN 180

Query: 181 SSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIAC-ESNSGLNEFENVDVALSSVHEEM 240
            SIF+S+LL+++   K K   WSLVSK +HKG IAC E    +NE   V  ALS V +  
Sbjct: 181 CSIFQSLLLFMSTSSKPKQSRWSLVSKLMHKGEIACEEKQENVNELVAVYAALSEVSDS- 240

Query: 241 EVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIIS 285
             EK +I  K+LE+L ++ +++ES L+ +FR LIKTRASLLN+IS
Sbjct: 241 --EKVKITYKKLEALVISIEDLESCLERVFRVLIKTRASLLNVIS 282

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BLAST of Cla014335 vs. NCBI nr
Match: gi|659080626|ref|XP_008440893.1| (PREDICTED: uncharacterized protein LOC103485177 [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 6.6e-140
Identity = 263/286 (91.96%), Postives = 271/286 (94.76%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSSS-VCGALLGLQDLYDSIDEL 60
           MATKYH RSISLPSRSHP T KVEEELRKVKTWVSSSSSSS VCG LLGLQDLYDSIDEL
Sbjct: 1   MATKYHARSISLPSRSHPSTSKVEEELRKVKTWVSSSSSSSSVCGGLLGLQDLYDSIDEL 60

Query: 61  LKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRKGY 120
           LKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAK++TLETQQHVGALHSAVRRRKG 
Sbjct: 61  LKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKEVTLETQQHVGALHSAVRRRKGD 120

Query: 121 SAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQACST 180
           SA+KT TAAY CYRKRMKKEAKKLITSMKKMNEKFN+  MEN DHHLSSVIGAL QACST
Sbjct: 121 SAVKTATAAYNCYRKRMKKEAKKLITSMKKMNEKFNTTPMENPDHHLSSVIGALRQACST 180

Query: 181 NSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSVHEEM 240
           NS IFESVL+YLTPL KSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSS+ EEM
Sbjct: 181 NSLIFESVLVYLTPLTKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSIVEEM 240

Query: 241 EVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
           EVEKSQIAQKRLESLEMAAQEIESGLDG+FRRLIKTRAS+LNIISQ
Sbjct: 241 EVEKSQIAQKRLESLEMAAQEIESGLDGVFRRLIKTRASMLNIISQ 286

[Close]

BLAST of Cla014335 vs. NCBI nr
Match: gi|778719853|ref|XP_011658068.1| (PREDICTED: uncharacterized protein LOC101217795 [Cucumis sativus])

HSP 1 Score: 498.4 bits (1282), Expect = 8.1e-138
Identity = 259/288 (89.93%), Postives = 269/288 (93.40%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSS---SSSSSVCGALLGLQDLYDSID 60
           MATKYH RSISLPSRSHP T+KVEEEL KVKTWVSS   SSSSSVCG LLGLQDLYDSID
Sbjct: 1   MATKYHARSISLPSRSHPSTLKVEEELAKVKTWVSSTTSSSSSSVCGGLLGLQDLYDSID 60

Query: 61  ELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRK 120
           ELLKMGSTQKVLSCPQHKQ VEELLDGSMKLLDVCSLAK++TLETQQHVGALHSAVRRRK
Sbjct: 61  ELLKMGSTQKVLSCPQHKQFVEELLDGSMKLLDVCSLAKEVTLETQQHVGALHSAVRRRK 120

Query: 121 GYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQAC 180
           G SA+KT T AY CYRKRMKKEAKKLITSMKKMNEKFN+  MEN DHHLSSVIGAL QAC
Sbjct: 121 GDSAVKTATVAYNCYRKRMKKEAKKLITSMKKMNEKFNTTPMENPDHHLSSVIGALRQAC 180

Query: 181 STNSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSVHE 240
           STN+ IFESVL+YLTPL KSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSV +
Sbjct: 181 STNNLIFESVLVYLTPLTKSKARGWSLVSKWVHKGAIACESNSGLNEFENVDVALSSVVQ 240

Query: 241 EMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
           EMEVEKSQIAQKRLESLEMAAQEIESGLDG+FRRLIKTRAS+LNIISQ
Sbjct: 241 EMEVEKSQIAQKRLESLEMAAQEIESGLDGVFRRLIKTRASMLNIISQ 288

[Close]

BLAST of Cla014335 vs. NCBI nr
Match: gi|595821705|ref|XP_007204858.1| (hypothetical protein PRUPE_ppa026133mg [Prunus persica])

HSP 1 Score: 307.8 bits (787), Expect = 2.0e-80
Identity = 162/297 (54.55%), Postives = 221/297 (74.41%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSS---SVCGALLGLQDLYDSID 60
           MA KYH RSISLPSRSHP T++VEEEL +++ W +SSS+S   S+C AL GL++LY+ +D
Sbjct: 1   MAAKYHVRSISLPSRSHPTTLRVEEELSRLQAWEASSSASTSDSICRALCGLEELYECVD 60

Query: 61  ELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRK 120
           +LL M STQ++LS PQ ++ + ELLDGS++LLD+C + KD   + ++H  AL SA+RRRK
Sbjct: 61  DLLHMASTQQLLSQPQQEKYMNELLDGSVRLLDICGITKDAISQIKEHARALQSALRRRK 120

Query: 121 GYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQAC 180
           G S+I+T  A Y C+RK+MKKEAKKLITS+K+++ K  +  M   D HLS+VI  L +AC
Sbjct: 121 GDSSIETGIANYTCFRKKMKKEAKKLITSLKQVDSKIGASQMVEQDQHLSAVIRVLREAC 180

Query: 181 STNSSIFESVLLYLT-PLMKSKARGWSLVSKWVHKGAIACE-SNSGLNEFENVDVALSSV 240
           S N SIF+S+L++L+ P+ K K+  WSLVSK++HKG IACE     +NE + VD AL+++
Sbjct: 181 SNNMSIFQSLLVFLSVPVSKPKSNKWSLVSKFMHKGVIACEGQKEDINEMDGVDAALNTL 240

Query: 241 H-------EEMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
                   E  +VEK Q AQKRLE+LE+  + ++SGL+ +FRRLIKTRASLLNIISQ
Sbjct: 241 RKSSAAPIECTDVEKIQSAQKRLEALEVTIEGLDSGLESVFRRLIKTRASLLNIISQ 297

[Close]

BLAST of Cla014335 vs. NCBI nr
Match: gi|645273856|ref|XP_008242078.1| (PREDICTED: uncharacterized protein LOC103340436 [Prunus mume])

HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78
Identity = 159/297 (53.54%), Postives = 221/297 (74.41%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSS---SVCGALLGLQDLYDSID 60
           MA KYH RSISLPSRSHP T++VEEEL +++ W +SSS+S   S+C AL GL++LY+ +D
Sbjct: 1   MAAKYHVRSISLPSRSHPTTLRVEEELSRLQAWEASSSASTSDSICRALCGLEELYECLD 60

Query: 61  ELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRK 120
           +LL M STQ++LS  Q ++ ++ELLDGS++LLD+C + KD   + ++H  AL SA+RRRK
Sbjct: 61  DLLHMASTQQLLSQHQQEKYMDELLDGSVRLLDICGITKDAISQIKEHARALQSALRRRK 120

Query: 121 GYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQAC 180
           G S+I+T+ A Y C+RK+MKK+AKKLITS+K+++ K  +  M   D HLS+VI  L +AC
Sbjct: 121 GDSSIETSIANYTCFRKKMKKDAKKLITSLKQVDSKIGASQMVEQDQHLSAVIRVLREAC 180

Query: 181 STNSSIFESVLLYLT-PLMKSKARGWSLVSKWVHKGAIACE-SNSGLNEFENVDVALSSV 240
           S N SIF+S L++L+ P+ K K+  WSLVSK++HKG IACE     +NE + VD AL+++
Sbjct: 181 SKNMSIFQSFLVFLSVPVSKPKSNKWSLVSKFMHKGVIACEGQEEDINEMDGVDAALNTL 240

Query: 241 H-------EEMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
                   E  +VEK + AQKRLE+LE+  + +E+GL+ +FRRLIKTRASLLNIISQ
Sbjct: 241 RKSSTAPIECTDVEKIRSAQKRLEALEVTIEGLENGLESVFRRLIKTRASLLNIISQ 297

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BLAST of Cla014335 vs. NCBI nr
Match: gi|470105356|ref|XP_004289051.1| (PREDICTED: uncharacterized protein LOC101310646 [Fragaria vesca subsp. vesca])

HSP 1 Score: 290.8 bits (743), Expect = 2.6e-75
Identity = 153/290 (52.76%), Postives = 216/290 (74.48%), Query Frame = 1


Query: 1   MATKYHGRSISLPSRSHPCTVKVEEELRKVKTWVSSSSSS---SVCGALLGLQDLYDSID 60
           MA KYH RSISLP+RSHP TV+VEEEL ++++W S+SS+S   S+   L GL++LYD +D
Sbjct: 1   MAAKYHVRSISLPTRSHPTTVRVEEELGRLQSWESTSSASTSDSILRGLSGLEELYDCVD 60

Query: 61  ELLKMGSTQKVLSCPQHKQLVEELLDGSMKLLDVCSLAKDMTLETQQHVGALHSAVRRRK 120
           +LL+M STQ++LS  Q ++ ++ELLDGS+KLLD+C + +D  L+ ++HV AL SA+RRRK
Sbjct: 61  DLLQMASTQQLLSQHQQEKCMDELLDGSVKLLDICGITRDFMLQVKEHVFALQSALRRRK 120

Query: 121 GYSAIKTTTAAYICYRKRMKKEAKKLITSMKKMNEKFNSISMENLDHHLSSVIGALSQAC 180
           G S+I+T+ A+Y  + K+MKK+AKKLI+ +K+ + K  S      D HL++VI  L Q C
Sbjct: 121 GDSSIETSIASYTSFSKKMKKDAKKLISQLKQADSKIVSSQSLEQDQHLAAVIRVLRQVC 180

Query: 181 STNSSIFESVLLYLTPLMKSKARGWSLVSKWVHKGAIACESNSGLN--EFENVDVALSSV 240
           + N SIF+S+L++L  +  SK+  WSLVSK +HKG +ACE+   +N  E + VD  LSS+
Sbjct: 181 AKNMSIFQSLLVFLA-VPVSKSNRWSLVSKLMHKGVVACETQVNINGHELDGVDSVLSSL 240

Query: 241 HEEMEVEKSQIAQKRLESLEMAAQEIESGLDGLFRRLIKTRASLLNIISQ 286
            +  EVEK Q AQK+LE+LE+  + +ESGL+ +F+RLIKTRASLLNIISQ
Sbjct: 241 CKSAEVEKIQSAQKKLEALEVCIEGLESGLESVFKRLIKTRASLLNIISQ 289

The following BLAST results are available for this feature:

BLAST of Cla014335 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGU4_CUCSA	5.7e-138	89.93	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507480 PE=4 SV=1	[more]
M5VXA1_PRUPE	1.4e-80	54.55	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026133mg PE=4 SV=1	[more]
U5GEW5_POPTR	2.2e-73	52.78	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10660g PE=4 SV=1	[more]
A0A061DGD3_THECC	4.1e-72	50.35	Uncharacterized protein OS=Theobroma cacao GN=TCM_000101 PE=4 SV=1	[more]
B9H694_POPTR	5.6e-69	50.18	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s10650g PE=4 SV=1	[more]

BLAST of Cla014335 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080626\|ref\|XP_008440893.1\|	6.6e-140	91.96	PREDICTED: uncharacterized protein LOC103485177 [Cucumis melo]	[more]
gi\|778719853\|ref\|XP_011658068.1\|	8.1e-138	89.93	PREDICTED: uncharacterized protein LOC101217795 [Cucumis sativus]	[more]
gi\|595821705\|ref\|XP_007204858.1\|	2.0e-80	54.55	hypothetical protein PRUPE_ppa026133mg [Prunus persica]	[more]
gi\|645273856\|ref\|XP_008242078.1\|	1.1e-78	53.54	PREDICTED: uncharacterized protein LOC103340436 [Prunus mume]	[more]
gi\|470105356\|ref\|XP_004289051.1\|	2.6e-75	52.76	PREDICTED: uncharacterized protein LOC101310646 [Fragaria vesca subsp. vesca]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006413	translational initiation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla014335	Cla014335.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 46..282 score: 2.3
None	No IPR available	unknown	Coil	Coil	coord: 133..153 scor
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 1..285 score: 2.1E
None	No IPR available	PANTHER	PTHR31509:SF14	SUBFAMILY NOT NAMED	coord: 1..285 score: 2.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla014335	CSPI06G32330	Wild cucumber (PI 183967)	cpiwmB519
Cla014335	Cucsa.044110	Cucumber (Gy14) v1	cgywmB026
Cla014335	CsGy6G031890	Cucumber (Gy14) v2	cgybwmB468
Cla014335	MELO3C007959.2	Melon (DHL92) v3.6.1	medwmB559
Cla014335	CsaV3_6G047690	Cucumber (Chinese Long) v3	cucwmB526
Cla014335	Bhi03G000583	Wax gourd	wgowmB432

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla014335	Cucurbita maxima (Rimu)	cmawmB632
Cla014335	Cucurbita maxima (Rimu)	cmawmB826
Cla014335	Cucurbita moschata (Rifu)	cmowmB315
Cla014335	Cucurbita moschata (Rifu)	cmowmB511
Cla014335	Cucurbita moschata (Rifu)	cmowmB623
Cla014335	Cucurbita moschata (Rifu)	cmowmB816
Cla014335	Melon (DHL92) v3.5.1	mewmB476
Cla014335	Melon (DHL92) v3.5.1	mewmB570
Cla014335	Watermelon (Charleston Gray)	wcgwmB072
Cla014335	Watermelon (Charleston Gray)	wcgwmB141
Cla014335	Cucumber (Chinese Long) v2	cuwmB261
Cla014335	Cucumber (Chinese Long) v2	cuwmB500
Cla014335	Cucurbita pepo (Zucchini)	cpewmB073
Cla014335	Cucurbita pepo (Zucchini)	cpewmB230
Cla014335	Cucurbita pepo (Zucchini)	cpewmB282
Cla014335	Cucurbita pepo (Zucchini)	cpewmB482
Cla014335	Bottle gourd (USVL1VR-Ls)	lsiwmB144
Cla014335	Bottle gourd (USVL1VR-Ls)	lsiwmB453
Cla014335	Cucumber (Gy14) v2	cgybwmB247
Cla014335	Melon (DHL92) v3.6.1	medwmB468
Cla014335	Silver-seed gourd	carwmB0333
Cla014335	Silver-seed gourd	carwmB0407
Cla014335	Silver-seed gourd	carwmB0426
Cla014335	Silver-seed gourd	carwmB0642
Cla014335	Cucumber (Chinese Long) v3	cucwmB272
Cla014335	Watermelon (97103) v2	wmwmbB234
Cla014335	Watermelon (97103) v2	wmwmbB253
Cla014335	Wax gourd	wgowmB047
Cla014335	Watermelon (97103) v1	wmwmB048
Cla014335	Cucumber (Gy14) v1	cgywmB587