Cla014080 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla014080
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Macrophage erythroblast attacher (AHRD V1 **-- E4V347_ARTGP); contains Interpro domain(s) IPR013144 Ran binding protein-like, CRA domain
Location	Chr1 : 28021004 .. 28022170 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTGGATAGCATTAAAGATGCATTTGATCGTGTGACAAAGAAGCAGAAATTATCTTCTTCCAAAAGTCAAGAAGTAGTTGATCAGATCCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTAGCTGATAATCCGGAATGTCCAATTGATTTGAATTCAGTTTTTGCTGAACTCAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTTGAAAGCACACAAAAGGAGTTGAATGCTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATGCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATAATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGTGAGTCAGAATCTGCTGTCTCGTTGAGGTCTCCATTTCAGGAAATGTACCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAGTAAACTCAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAAGGAGATAGACATGACGCTTTGAAGTATGCTAGGACCTACCTGGCACCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTATTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCACAATTATTATCAGTAGCAAATTGGGATAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGTGTAACGGTTGCAGCAGGGATCCAGGGATTGCCTCCCCTCCTGAAGTTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCGAAGGAACAGTCGACTGAAGAAAATCCTCCAATGTTAATGCTGTGTGGCCACGTCCTCTGCAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAACTGTACTTTTGA

mRNA sequence

ATGGAATTGGATAGCATTAAAGATGCATTTGATCGTGTGACAAAGAAGCAGAAATTATCTTCTTCCAAAAGTCAAGAAGTAGTTGATCAGATCCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTAGCTGATAATCCGGAATGTCCAATTGATTTGAATTCAGTTTTTGCTGAACTCAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTTGAAAGCACACAAAAGGAGTTGAATGCTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATGCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATAATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGTGAGTCAGAATCTGCTGTCTCGTTGAGGTCTCCATTTCAGGAAATGTACCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAGTAAACTCAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAAGGAGATAGACATGACGCTTTGAAGTATGCTAGGACCTACCTGGCACCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTATTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCACAATTATTATCAGTAGCAAATTGGGATAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGTGTAACGGTTGCAGCAGGGATCCAGGGATTGCCTCCCCTCCTGAAGTTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCGAAGGAACAGTCGACTGAAGAAAATCCTCCAATGTTAATGCTGTGTGGCCACGTCCTCTGCAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAACTGTACTTTTGA

Coding sequence (CDS)

ATGGAATTGGATAGCATTAAAGATGCATTTGATCGTGTGACAAAGAAGCAGAAATTATCTTCTTCCAAAAGTCAAGAAGTAGTTGATCAGATCCATCTGGAACTGGAGCAGGTGCTACAAAAAATACAGTTAGCTGATAATCCGGAATGTCCAATTGATTTGAATTCAGTTTTTGCTGAACTCAAAACTAAATTGAAGGATATTGCCCCACTCACTCAGCTTGAAAGCACACAAAAGGAGTTGAATGCTGCTCTGACCAAGTATCCAAAGCTTGTTGAAAAATCTTTCAATGCAGATATATCAAAAGCTTATAGAAACGTTGATTTTGATAGGCATACTGTTAACCAGATAATTGCTAGTCATTTCTATCGCCAGGGTATGTTTGAACTTGGTGACTGCTTTATTAGTGAGGCTGGTGAGTCAGAATCTGCTGTCTCGTTGAGGTCTCCATTTCAGGAAATGTACCAGATCCTTGAAGCCATGAAGTCCCGGAATCTAGAGCCAGCTCTGAACTGGGCTCTGAATAACTCAAGTAAACTCAAGGAATGTGGGTCGGATCTTTTGCTAAAACTTCATAGCATGCAGTTCATGGAGATTCTACAAAAAGGAGATAGACATGACGCTTTGAAGTATGCTAGGACCTACCTGGCACCTCTTGCATCCAACCACATGGCTGAACTTCAGAAGCTTATGGCTTGCCTATTGTGGACTGGAAGGCTTGATTGCTCCCCATACTCTCATTCACAATTATTATCAGTAGCAAATTGGGATAAAGTTGCTGAGGAGCTTATAAGACAGTTCTGCAATTTTCTTGGTCAGTCCTACGAGAGCCCATTGGGTGTAACGGTTGCAGCAGGGATCCAGGGATTGCCTCCCCTCCTGAAGTTTATGAATGTCATGGCTGGGAAGAAACAGGAATGGCAATCTATGAAGCAGTTGCCTGTTCCTGTGGAGTTGGACAGAGAATTTCAGTTCCATTCCATCTTTGTTTGTCCGGTGTCGAAGGAACAGTCGACTGAAGAAAATCCTCCAATGTTAATGCTGTGTGGCCACGTCCTCTGCAAGCAGTCTATCATGAAGATGTCTAAAAACAGCACAAAATCGTTTAAGTGCCCGTATTGTCCAACAGACATTGATGCTACACGGTGTAGGCAACTGTACTTTTGA

Protein sequence

MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF

Homology

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BLAST of Cla014080 vs. Swiss-Prot
Match: RMD5A_XENLA (Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.7e-53
Identity = 124/381 (32.55%), Postives = 211/381 (55.38%), Query Frame = 1


Query: 18  KLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAELKTKLKDIAPLTQLEST 77
           +L     +E++D       ++LQ  +   + E    L+ V  +   ++KD   + +L S 
Sbjct: 23  QLCERSLEELIDYAGGLRREILQAAE--QDGELSGTLSLVLTQCCKRIKDT--VQKLASD 82

Query: 78  QKELNAALTKYPKLVEKSFNADISKAYRNVDF-----DRHTVNQIIASHFYRQGMFELGD 137
            K++++++++  K ++K+F+ADIS     +D       +  +++++  HF+RQGM ++ +
Sbjct: 83  HKDIHSSVSRVGKAIDKNFDADISSV--GIDGCWQTDSQRILSEVMVEHFFRQGMLDVAE 142

Query: 138 CFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKLH 197
               EA  S  A S + PF E+ +ILEA+K R L PAL WA++N   L    S L  KLH
Sbjct: 143 ELCQEASLSIDA-SQKEPFVELNRILEALKVRVLRPALEWAVSNREMLMAQNSSLEFKLH 202

Query: 198 SMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQKLMACLLWTGR-LDCSPYSHSQ 257
            + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q LM  L++  + ++ SPY H  
Sbjct: 203 RLYFISLLMGGTVNQQEALQYAKNF-QPFAENHQKDIQVLMGSLVYLRQGIENSPYVH-- 262

Query: 258 LLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVMAGKKQE--W 317
           LL    W  + +   R  C+ LG S ESPL V+ +AG   LP L+    V+  ++    W
Sbjct: 263 LLDANQWADICDIFTRDACSLLGLSVESPLSVSFSAGCVALPALINIKAVIEQRQCSGVW 322

Query: 318 QSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTK 377
               +LP+ V+L ++  +HSIF CP+ ++Q+TE NPPM ++CGH++ + ++ KM   S  
Sbjct: 323 NQKDELPIEVDLGKKCWYHSIFACPILRQQTTENNPPMKLVCGHIISRDALNKMFNGS-- 382

Query: 378 SFKCPYCPTDIDATRCRQLYF 389
             KCPYCP +      +Q++F
Sbjct: 383 KLKCPYCPMEQSPGDAKQIFF 391

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BLAST of Cla014080 vs. Swiss-Prot
Match: RMD5A_XENTR (Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.9e-53
Identity = 117/343 (34.11%), Postives = 197/343 (57.43%), Query Frame = 1


Query: 54  LNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRN---VDFD 113
           L+ V  +   ++KD   + +L S  K++++++++  K ++K+F+ADIS    +    +  
Sbjct: 57  LSLVLTQCCKRIKDT--VQKLASDHKDIHSSVSRVGKAIDKNFDADISSVGIDGCWQNDS 116

Query: 114 RHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPAL 173
           +  +++++  HF+RQGM ++ +    EAG S  A S + PF E+ +ILEA+K R L PAL
Sbjct: 117 QQILSEVMVEHFFRQGMLDVAEELCQEAGLSIDA-SQKEPFVELNRILEALKVRVLRPAL 176

Query: 174 NWALNNSSKLKECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAELQ 233
            WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  ++Q
Sbjct: 177 EWAVSNREMLMAQNSSLEFKLHRLYFISLLMGGTVNQREALQYAKNF-QPFAENHQKDIQ 236

Query: 234 KLMACLLWTGR-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGI 293
            LM  L++  + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +AG 
Sbjct: 237 VLMGSLVYLRQGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSAGC 296

Query: 294 QGLPPLLKFMNVMAGKKQE--WQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPM 353
             LP L+    V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NPPM
Sbjct: 297 VALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNPPM 356

Query: 354 LMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
            ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 KLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

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BLAST of Cla014080 vs. Swiss-Prot
Match: YB83_SCHPO (LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC29A3.03c PE=3 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-52
Identity = 117/339 (34.51%), Postives = 180/339 (53.10%), Query Frame = 1


Query: 74  LESTQKELNAALTKYPKLVEKSFNADIS--KAYRNVDFDRHTVNQIIASHFYRQGMFELG 133
           L+ T+K+ + +L ++ K +EK FN D+   K + + +  +  ++  ++ HF+RQG  EL 
Sbjct: 61  LKRTEKKFHTSLNRFGKTLEKKFNFDLEDIKLHSSFESKKREIDTALSLHFFRQGDVELA 120

Query: 134 DCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKL 193
             F  EAG  E + SL   F  +  I++ ++ ++L+  + WA      L+  GS L   L
Sbjct: 121 HLFCKEAGIEEPSESLHV-FTLLKSIVQGIRDKDLKLPIEWASQCRGYLERKGSSLEYTL 180

Query: 194 HSMQFME-ILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGR---LDCSPYSH 253
              + +   L   D   A++Y RT +A     H+A++QK M  L +  R   L  +  SH
Sbjct: 181 QKYRLVSNYLTTKDIMAAIRYCRTNMAEFQKKHLADIQKTMIALFFCSRNEVLSGTNDSH 240

Query: 254 SQLLSV------------------ANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQG 313
             +  +                   +W  +    +R+FC  LG S ESPL + V AG   
Sbjct: 241 DSIHHIISNNAQLNIPQEYIDVLDLDWKSLELLFVREFCAALGMSLESPLDIVVNAGAIA 300

Query: 314 LPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLC 373
           LP LLK  ++M  K  EW S  +LPV + L   + FHS+F CPVSKEQ+TEENPPM+M C
Sbjct: 301 LPILLKMSSIMKKKHTEWTSQGELPVEIFLPSSYHFHSVFTCPVSKEQATEENPPMMMSC 360

Query: 374 GHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           GHV+ K+S+ ++S+N ++ FKCPYCP +  A    ++YF
Sbjct: 361 GHVIVKESLRQLSRNGSQRFKCPYCPNENVAADAIRVYF 398

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BLAST of Cla014080 vs. Swiss-Prot
Match: RMD5A_HUMAN (Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 5.4e-52
Identity = 116/345 (33.62%), Postives = 196/345 (56.81%), Query Frame = 1


Query: 54  LNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDF---- 113
           L+ V  +   ++KD   + +L S  K++++++++  K ++K+F++DIS     +D     
Sbjct: 57  LSLVLTQCCKRIKDT--VQKLASDHKDIHSSVSRVGKAIDKNFDSDISSV--GIDGCWQA 116

Query: 114 -DRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEP 173
             +  +N+++  HF+RQGM ++ +    E+G S    S + PF E+ +ILEA+K R L P
Sbjct: 117 DSQRLLNEVMVEHFFRQGMLDVAEELCQESGLSVDP-SQKEPFVELNRILEALKVRVLRP 176

Query: 174 ALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAE 233
           AL WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  +
Sbjct: 177 ALEWAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKNF-QPFALNHQKD 236

Query: 234 LQKLMACLLWTGR-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAA 293
           +Q LM  L++  + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +A
Sbjct: 237 IQVLMGSLVYLRQGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSA 296

Query: 294 GIQGLPPLLKFMNVMAGKKQE--WQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENP 353
           G   LP L+    V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NP
Sbjct: 297 GCVALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNP 356

Query: 354 PMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           PM ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 PMKLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Cla014080 vs. Swiss-Prot
Match: RMD5A_MOUSE (Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 5.4e-52
Identity = 116/345 (33.62%), Postives = 196/345 (56.81%), Query Frame = 1


Query: 54  LNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDF---- 113
           L+ V  +   ++KD   + +L S  K++++++++  K ++K+F++DIS     +D     
Sbjct: 57  LSLVLTQCCKRIKDT--VQKLASDHKDIHSSVSRVGKAIDKNFDSDISSV--GIDGCWQA 116

Query: 114 -DRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEP 173
             +  +N+++  HF+RQGM ++ +    E+G S    S + PF E+ +ILEA+K R L P
Sbjct: 117 DSQRLLNEVMVEHFFRQGMLDVAEELCQESGLSVDP-SQKEPFVELNRILEALKVRVLRP 176

Query: 174 ALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKG--DRHDALKYARTYLAPLASNHMAE 233
           AL WA++N   L    S L  KLH + F+ +L  G  ++ +AL+YA+ +  P A NH  +
Sbjct: 177 ALEWAVSNREMLIAQNSSLEFKLHRLYFISLLMGGTTNQREALQYAKNF-QPFALNHQKD 236

Query: 234 LQKLMACLLWTGR-LDCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAA 293
           +Q LM  L++  + ++ SPY H  LL    W  + +   R  C  LG S ESPL V+ +A
Sbjct: 237 IQVLMGSLVYLRQGIENSPYVH--LLDANQWADICDIFTRDACALLGLSVESPLSVSFSA 296

Query: 294 GIQGLPPLLKFMNVMAGKKQE--WQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENP 353
           G   LP L+    V+  ++    W    +LP+ V+L ++  +HSIF CP+ ++Q+T+ NP
Sbjct: 297 GCVALPALINIKAVIEQRQCTGVWNQKDELPIEVDLGKKCWYHSIFACPILRQQTTDNNP 356

Query: 354 PMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           PM ++CGH++ + ++ KM   S    KCPYCP +      +Q++F
Sbjct: 357 PMKLVCGHIISRDALNKMFNGS--KLKCPYCPMEQSPGDAKQIFF 391

[Close]

BLAST of Cla014080 vs. TrEMBL
Match: A0A0A0KIN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497200 PE=4 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 2.6e-202
Identity = 348/358 (97.21%), Postives = 354/358 (98.88%), Query Frame = 1


Query: 31  IHLELEQVLQKIQLADNPECPIDLNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPK 90
           +HLELEQVLQKIQLADNPECPID+NSVFA LKTKLKDIAPLTQLESTQKELN ALTKYPK
Sbjct: 1   MHLELEQVLQKIQLADNPECPIDMNSVFAALKTKLKDIAPLTQLESTQKELNTALTKYPK 60

Query: 91  LVEKSFNADISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSP 150
           LVEKSFN DISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESA SLRSP
Sbjct: 61  LVEKSFNPDISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASLRSP 120

Query: 151 FQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKGDRHDALK 210
           FQEMYQILE+MKSRNLEPALNWALNNS+KLK+CGSDLLLKLHSMQFMEILQKGDRHDALK
Sbjct: 121 FQEMYQILESMKSRNLEPALNWALNNSNKLKDCGSDLLLKLHSMQFMEILQKGDRHDALK 180

Query: 211 YARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNF 270
           YARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNF
Sbjct: 181 YARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNF 240

Query: 271 LGQSYESPLGVTVAAGIQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFV 330
           LGQSYESPLGVTVAAG+QGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFV
Sbjct: 241 LGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFV 300

Query: 331 CPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           CPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 301 CPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 358

[Close]

BLAST of Cla014080 vs. TrEMBL
Match: M5VYM6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006991mg PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 2.6e-170
Identity = 298/388 (76.80%), Postives = 336/388 (86.60%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL +IKDAFDRV KKQKLSSSK+QEV+DQI  E+++ LQKIQ +++ E  +D  S  AE
Sbjct: 1   MELTTIKDAFDRVAKKQKLSSSKAQEVIDQIDQEIQKTLQKIQSSNDCESQVDYKSALAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK KL DIAPL+QLESTQKELN AL+KYPK +EK FN DISKAYRN+DFD HTVN+II S
Sbjct: 61  LKVKLNDIAPLSQLESTQKELNGALSKYPKHLEKFFNPDISKAYRNIDFDTHTVNEIIGS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFY+QG+FE+GDCF +EA E ES  +++S FQEM+QI+EAMK RNLEPALNWA+ NS KL
Sbjct: 121 HFYQQGLFEIGDCFRTEAKEPESEAAVKSQFQEMFQIVEAMKRRNLEPALNWAVTNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K  GSDLLLKL S+QF+EILQKG+R  AL+YARTYLAP AS+HMAE+QKLM CLLWTGRL
Sbjct: 181 KPNGSDLLLKLQSLQFVEILQKGNRDGALQYARTYLAPFASDHMAEIQKLMVCLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           D SPYSH  LLS ANWDKV  EL RQFCN LGQSYESPL VT+AAGIQGLPPLLKFMNVM
Sbjct: 241 DRSPYSH--LLSPANWDKVTGELTRQFCNLLGQSYESPLSVTIAAGIQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGK+QEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLM CGHVLCKQSI K
Sbjct: 301 AGKRQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMSCGHVLCKQSITK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKN TKSFKCPYCP+D+++ +CR L F
Sbjct: 361 MSKNGTKSFKCPYCPSDVNSAQCRPLVF 386

[Close]

BLAST of Cla014080 vs. TrEMBL
Match: W9RQC0_9ROSA (Protein RMD5-A-like protein OS=Morus notabilis GN=L484_016101 PE=4 SV=1)

HSP 1 Score: 597.8 bits (1540), Expect = 9.3e-168
Identity = 295/388 (76.03%), Postives = 336/388 (86.60%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL++IKDAFDRVTKKQKLSSSK+QEV++QI  E+E  LQK+Q  D+ E  +D  SV AE
Sbjct: 1   MELNTIKDAFDRVTKKQKLSSSKAQEVLEQIDREIELALQKLQSLDDLESELDYLSVLAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKD+AP  QLESTQKELN AL+KYPKL+EK+FN DI+KAYRN  FD HTVNQIIAS
Sbjct: 61  LKTKLKDMAPPNQLESTQKELNMALSKYPKLLEKTFNPDITKAYRNTVFDTHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQG+FE+GDCF++E  E ES  S++  FQEM+QILEAM+ RNL+PALNWA  NS KL
Sbjct: 121 HFYRQGLFEIGDCFVAETQEPESVCSVKLLFQEMFQILEAMRCRNLQPALNWAAANSEKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K+ GSDLLLKLHS+QF+EILQK  R +ALKYARTYL+  AS+HM+E+QKL+ C+LWTGRL
Sbjct: 181 KQNGSDLLLKLHSLQFVEILQKQSREEALKYARTYLSSFASDHMSEIQKLVICILWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           D SPY  +QLLS  NWDKVAE+L RQFCN LGQSYESPL VT+AAG QGLPPLLKFM VM
Sbjct: 241 DRSPY--AQLLSPTNWDKVAEKLTRQFCNILGQSYESPLNVTIAAGAQGLPPLLKFMTVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQ MKQLPVPVELD+EFQFHSIFVCPVSKEQS +ENPPMLM CGHVLCKQSIMK
Sbjct: 301 AGKKQEWQLMKQLPVPVELDKEFQFHSIFVCPVSKEQSNDENPPMLMTCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNST+SFKCPYCP+DIDA+ CRQL F
Sbjct: 361 MSKNSTRSFKCPYCPSDIDASTCRQLCF 386

[Close]

BLAST of Cla014080 vs. TrEMBL
Match: A0A0D2QF67_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G035500 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 2.2e-161
Identity = 285/388 (73.45%), Postives = 326/388 (84.02%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL+++KDAFDRV KKQKLS SK QEV+DQI  E+E+ ++ +Q        +D  S+ AE
Sbjct: 1   MELNNLKDAFDRVAKKQKLSCSKVQEVMDQIVQEIEKAIEMMQ-----STTLDHKSILAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK KL +IAPL QLE TQKELN AL+KYPK +EK+ N DISKAYRN++FD HTVNQIIAS
Sbjct: 61  LKKKLHEIAPLAQLEGTQKELNIALSKYPKALEKTLNPDISKAYRNIEFDSHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMF++GDCFI+EAGE+E+A ++RS FQEMYQILEAMKSRNLEPAL WA  NS  L
Sbjct: 121 HFYRQGMFDVGDCFITEAGEAEAAAAMRSLFQEMYQILEAMKSRNLEPALKWAAANSDNL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KE GSDLLL LH +QF++ILQKG R +ALKYART   P A NHMAE+QKLM CLL++ RL
Sbjct: 181 KENGSDLLLGLHQLQFVKILQKGSREEALKYARTNFVPFAGNHMAEIQKLMGCLLYSDRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
             SPY+H  LLS  NWD VAEEL RQFCN LGQSY+SPL VT+AAG+QGLPPLLKFM VM
Sbjct: 241 SESPYAH--LLSPTNWDIVAEELTRQFCNLLGQSYQSPLSVTIAAGVQGLPPLLKFMTVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELD+EFQFHSIFVCPVSKEQSTE+NPPMLM CGHVLCKQSI K
Sbjct: 301 AGKKQEWQSMKQLPVPVELDKEFQFHSIFVCPVSKEQSTEDNPPMLMSCGHVLCKQSINK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKN +K+FKCPYCP+D+DA RCRQL F
Sbjct: 361 MSKNGSKTFKCPYCPSDVDAPRCRQLNF 381

[Close]

BLAST of Cla014080 vs. TrEMBL
Match: A0A061DHA6_THECC (LisH/CRA/RING-U-box domains-containing protein OS=Theobroma cacao GN=TCM_000906 PE=4 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 1.1e-160
Identity = 286/388 (73.71%), Postives = 328/388 (84.54%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL+S+KDAFDRV KKQKLS SK+QEV+D I  E+E+ ++ +Q         D  SV AE
Sbjct: 1   MELNSLKDAFDRVAKKQKLSFSKTQEVMDLIFQEIEKAIEMMQ-----STTFDYKSVLAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK KL +IAPL+QLE TQKELN AL+KYPK +EK  N DISKAYRN++FD +TVNQIIAS
Sbjct: 61  LKKKLHEIAPLSQLEGTQKELNIALSKYPKALEKILNPDISKAYRNIEFDSNTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYR G+F++GDCFI+E GE+E+AV++RS FQEMYQ+LEAMKSRNLEPAL WA  NS KL
Sbjct: 121 HFYRLGLFDVGDCFINETGEAEAAVAMRSLFQEMYQMLEAMKSRNLEPALKWAAVNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KE GSDL LKLH +QF++ILQKG R +ALKYART  AP A+NHMAE+QKLM CLL++ RL
Sbjct: 181 KENGSDLQLKLHHLQFVKILQKGSRDEALKYARTNFAPFAANHMAEIQKLMGCLLYSDRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
             SPY+H  LLS  NWD VAEEL RQFCN LGQSYESPL VT+AAG+QGLPPLLKFM VM
Sbjct: 241 QDSPYAH--LLSPTNWDVVAEELTRQFCNLLGQSYESPLNVTIAAGVQGLPPLLKFMTVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELD+EFQFH IFVCPVSKEQST++NPPMLM CGHVLCKQSI K
Sbjct: 301 AGKKQEWQSMKQLPVPVELDKEFQFHPIFVCPVSKEQSTDDNPPMLMSCGHVLCKQSINK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNS+KSFKCPYCP+DIDAT+CRQL F
Sbjct: 361 MSKNSSKSFKCPYCPSDIDATQCRQLNF 381

[Close]

BLAST of Cla014080 vs. NCBI nr
Match: gi|659079880|ref|XP_008440495.1| (PREDICTED: protein RMD5 homolog A [Cucumis melo])

HSP 1 Score: 771.9 bits (1992), Expect = 5.2e-220
Identity = 381/388 (98.20%), Postives = 386/388 (99.48%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVD+IHLELEQVLQKIQLADNPECPIDLNSVFAE
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDRIHLELEQVLQKIQLADNPECPIDLNSVFAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQL+STQKELNAALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLDSTQKELNAALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla014080 vs. NCBI nr
Match: gi|449451359|ref|XP_004143429.1| (PREDICTED: lisH domain-containing protein C29A3.03c [Cucumis sativus])

HSP 1 Score: 767.7 bits (1981), Expect = 9.8e-219
Identity = 378/388 (97.42%), Postives = 384/388 (98.97%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MELDSIKDAFDRVTKKQKLSSSKSQEVVDQ+HLELEQVLQKIQLADNPECPID+NSVFA 
Sbjct: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQMHLELEQVLQKIQLADNPECPIDMNSVFAA 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKDIAPLTQLESTQKELN ALTKYPKLVEKSFN DISKAYRNVDFDRHTVNQIIAS
Sbjct: 61  LKTKLKDIAPLTQLESTQKELNTALTKYPKLVEKSFNPDISKAYRNVDFDRHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQGMFELGDCFISEAGESESA SLRSPFQEMYQILE+MKSRNLEPALNWALNNS+KL
Sbjct: 121 HFYRQGMFELGDCFISEAGESESAASLRSPFQEMYQILESMKSRNLEPALNWALNNSNKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K+CGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL
Sbjct: 181 KDCGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAG+QGLPPLLKFMNVM
Sbjct: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGVQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK
Sbjct: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 388

[Close]

BLAST of Cla014080 vs. NCBI nr
Match: gi|700193465|gb|KGN48669.1| (hypothetical protein Csa_6G497200 [Cucumis sativus])

HSP 1 Score: 712.6 bits (1838), Expect = 3.7e-202
Identity = 348/358 (97.21%), Postives = 354/358 (98.88%), Query Frame = 1


Query: 31  IHLELEQVLQKIQLADNPECPIDLNSVFAELKTKLKDIAPLTQLESTQKELNAALTKYPK 90
           +HLELEQVLQKIQLADNPECPID+NSVFA LKTKLKDIAPLTQLESTQKELN ALTKYPK
Sbjct: 1   MHLELEQVLQKIQLADNPECPIDMNSVFAALKTKLKDIAPLTQLESTQKELNTALTKYPK 60

Query: 91  LVEKSFNADISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAVSLRSP 150
           LVEKSFN DISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESA SLRSP
Sbjct: 61  LVEKSFNPDISKAYRNVDFDRHTVNQIIASHFYRQGMFELGDCFISEAGESESAASLRSP 120

Query: 151 FQEMYQILEAMKSRNLEPALNWALNNSSKLKECGSDLLLKLHSMQFMEILQKGDRHDALK 210
           FQEMYQILE+MKSRNLEPALNWALNNS+KLK+CGSDLLLKLHSMQFMEILQKGDRHDALK
Sbjct: 121 FQEMYQILESMKSRNLEPALNWALNNSNKLKDCGSDLLLKLHSMQFMEILQKGDRHDALK 180

Query: 211 YARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNF 270
           YARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNF
Sbjct: 181 YARTYLAPLASNHMAELQKLMACLLWTGRLDCSPYSHSQLLSVANWDKVAEELIRQFCNF 240

Query: 271 LGQSYESPLGVTVAAGIQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFV 330
           LGQSYESPLGVTVAAG+QGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFV
Sbjct: 241 LGQSYESPLGVTVAAGVQGLPPLLKFMNVMAGKKQEWQSMKQLPVPVELDREFQFHSIFV 300

Query: 331 CPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           CPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF
Sbjct: 301 CPVSKEQSTEENPPMLMLCGHVLCKQSIMKMSKNSTKSFKCPYCPTDIDATRCRQLYF 358

[Close]

BLAST of Cla014080 vs. NCBI nr
Match: gi|645219650|ref|XP_008236751.1| (PREDICTED: protein RMD5 homolog A [Prunus mume])

HSP 1 Score: 610.5 bits (1573), Expect = 2.0e-171
Identity = 301/388 (77.58%), Postives = 336/388 (86.60%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL +IKDAFDRV KKQKLSSSK+QEV+DQI  E+++ LQKIQ +++ E  +D  S  AE
Sbjct: 1   MELTTIKDAFDRVAKKQKLSSSKAQEVIDQIDQEIQKTLQKIQSSNDCESQVDYKSALAE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LK KLKDIAPL+QLE TQKELN AL+KYPK +EK FN DISKAYRN+DFD HTVN+II S
Sbjct: 61  LKVKLKDIAPLSQLEGTQKELNGALSKYPKHLEKFFNPDISKAYRNIDFDTHTVNEIIGS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HF RQG+FE+GDCF +EA E ES  S++S FQEM+QI+EAMK RNLEPALNWA+ NS KL
Sbjct: 121 HFCRQGLFEIGDCFRTEAKEPESEASVKSQFQEMFQIVEAMKHRNLEPALNWAMTNSDKL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K  GSDLLLKLHS+QF+EILQKG+R  AL+YARTYLAP AS+HMAE+QKLM CLLWTGRL
Sbjct: 181 KPNGSDLLLKLHSLQFVEILQKGNRDGALQYARTYLAPFASDHMAEIQKLMVCLLWTGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           D SPYSH  LLS ANWDKV  EL RQFCN LGQSYESPL VT+AAGIQGLPPLLKFMNVM
Sbjct: 241 DRSPYSH--LLSPANWDKVTGELTRQFCNLLGQSYESPLSVTMAAGIQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGK+QEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLM CGHVLCKQSI K
Sbjct: 301 AGKRQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMSCGHVLCKQSITK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKN TKSFKCPYCP+D+D+ +CR L F
Sbjct: 361 MSKNGTKSFKCPYCPSDVDSVQCRPLVF 386

[Close]

BLAST of Cla014080 vs. NCBI nr
Match: gi|1009145551|ref|XP_015890398.1| (PREDICTED: protein RMD5 homolog A-like [Ziziphus jujuba])

HSP 1 Score: 606.3 bits (1562), Expect = 3.8e-170
Identity = 294/388 (75.77%), Postives = 333/388 (85.82%), Query Frame = 1


Query: 1   MELDSIKDAFDRVTKKQKLSSSKSQEVVDQIHLELEQVLQKIQLADNPECPIDLNSVFAE 60
           MEL++IKDAFDRV+KKQKLS S +QEV+DQI  E+EQ LQKIQ A NP+  +D   +  E
Sbjct: 1   MELNTIKDAFDRVSKKQKLSCSNTQEVIDQIDQEIEQALQKIQSASNPDSLLDHRPILVE 60

Query: 61  LKTKLKDIAPLTQLESTQKELNAALTKYPKLVEKSFNADISKAYRNVDFDRHTVNQIIAS 120
           LKTKLKD+ P+TQLESTQK+LN+AL+KYPKL+EKSFN DISKAYRN++FD HTVNQIIAS
Sbjct: 61  LKTKLKDMVPVTQLESTQKDLNSALSKYPKLLEKSFNPDISKAYRNIEFDTHTVNQIIAS 120

Query: 121 HFYRQGMFELGDCFISEAGESESAVSLRSPFQEMYQILEAMKSRNLEPALNWALNNSSKL 180
           HFYRQG+FE+GD F+ EA E ES   ++S FQ+MYQILEAMKS+NLEPAL WA +N+ +L
Sbjct: 121 HFYRQGLFEIGDLFVQEANEPESVAVIKSQFQDMYQILEAMKSQNLEPALKWATSNADRL 180

Query: 181 KECGSDLLLKLHSMQFMEILQKGDRHDALKYARTYLAPLASNHMAELQKLMACLLWTGRL 240
           K  GSDLL+KLHS+QF+EILQKG R +AL YARTYL+P ASNHM  +QKL+ C+LW GRL
Sbjct: 181 KHNGSDLLMKLHSLQFVEILQKGSRDEALNYARTYLSPFASNHMDAIQKLVVCILWAGRL 240

Query: 241 DCSPYSHSQLLSVANWDKVAEELIRQFCNFLGQSYESPLGVTVAAGIQGLPPLLKFMNVM 300
           D SPY   QLLS  NWDKV EEL RQFC  LGQSYESPL VTV AG QGLPPLLKFMNVM
Sbjct: 241 DRSPY--YQLLSPTNWDKVVEELTRQFCKILGQSYESPLAVTVVAGAQGLPPLLKFMNVM 300

Query: 301 AGKKQEWQSMKQLPVPVELDREFQFHSIFVCPVSKEQSTEENPPMLMLCGHVLCKQSIMK 360
           AGKK EWQ+MKQLPVPVELD+E+QFHSIFVCPVSKEQSTEENPPMLM CGHVLCKQSIMK
Sbjct: 301 AGKKHEWQTMKQLPVPVELDKEYQFHSIFVCPVSKEQSTEENPPMLMSCGHVLCKQSIMK 360

Query: 361 MSKNSTKSFKCPYCPTDIDATRCRQLYF 389
           MSKNSTKSFKCPYCP+DIDA RCR LYF
Sbjct: 361 MSKNSTKSFKCPYCPSDIDAIRCRMLYF 386

The following BLAST results are available for this feature:

BLAST of Cla014080 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RMD5A_XENLA	1.7e-53	32.55	Protein RMD5 homolog A OS=Xenopus laevis GN=rmnd5a PE=2 SV=1	[more]
RMD5A_XENTR	4.9e-53	34.11	Protein RMD5 homolog A OS=Xenopus tropicalis GN=rmnd5a PE=2 SV=1	[more]
YB83_SCHPO	1.9e-52	34.51	LisH domain-containing protein C29A3.03c OS=Schizosaccharomyces pombe (strain 97...	[more]
RMD5A_HUMAN	5.4e-52	33.62	Protein RMD5 homolog A OS=Homo sapiens GN=RMND5A PE=1 SV=1	[more]
RMD5A_MOUSE	5.4e-52	33.62	Protein RMD5 homolog A OS=Mus musculus GN=Rmnd5a PE=1 SV=2	[more]

BLAST of Cla014080 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIN7_CUCSA	2.6e-202	97.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G497200 PE=4 SV=1	[more]
M5VYM6_PRUPE	2.6e-170	76.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006991mg PE=4 SV=1	[more]
W9RQC0_9ROSA	9.3e-168	76.03	Protein RMD5-A-like protein OS=Morus notabilis GN=L484_016101 PE=4 SV=1	[more]
A0A0D2QF67_GOSRA	2.2e-161	73.45	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G035500 PE=4 SV=1	[more]
A0A061DHA6_THECC	1.1e-160	73.71	LisH/CRA/RING-U-box domains-containing protein OS=Theobroma cacao GN=TCM_000906 ...	[more]

BLAST of Cla014080 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079880\|ref\|XP_008440495.1\|	5.2e-220	98.20	PREDICTED: protein RMD5 homolog A [Cucumis melo]	[more]
gi\|449451359\|ref\|XP_004143429.1\|	9.8e-219	97.42	PREDICTED: lisH domain-containing protein C29A3.03c [Cucumis sativus]	[more]
gi\|700193465\|gb\|KGN48669.1\|	3.7e-202	97.21	hypothetical protein Csa_6G497200 [Cucumis sativus]	[more]
gi\|645219650\|ref\|XP_008236751.1\|	2.0e-171	77.58	PREDICTED: protein RMD5 homolog A [Prunus mume]	[more]
gi\|1009145551\|ref\|XP_015890398.1\|	3.8e-170	75.77	PREDICTED: protein RMD5 homolog A-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR006594	LisH
IPR006595	CTLH_C
IPR013083	Znf_RING/FYVE/PHD
IPR013144	CRA_dom
IPR024964	CTLH/CRA
IPR027370	Znf-RING_LisH
IPR027711	Rmd5

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0034657	GID complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
WMU39688	watermelon EST collection version 2.0	transcribed_cluster
WMU66344	watermelon EST collection version 2.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla014080	Cla014080.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
WMU66344	WMU66344	transcribed_cluster
WMU39688	WMU39688	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 331..374 score: 8.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 331..374 score: 8
IPR006594	LIS1 homology motif	SMART	SM00667	Lish	coord: 110..142 score: 0.
IPR006594	LIS1 homology motif	PROFILE	PS50896	LISH	coord: 110..142 score: 9
IPR006595	CTLH, C-terminal LisH motif	SMART	SM00668	ctlh	coord: 150..207 score: 2.
IPR006595	CTLH, C-terminal LisH motif	PROFILE	PS50897	CTLH	coord: 150..207 score: 11
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 329..387 score: 4.
IPR013144	CRA domain	SMART	SM00757	toby_final6	coord: 203..299 score: 5.3
IPR024964	CTLH/CRA C-terminal to LisH motif domain	PFAM	PF10607	CLTH	coord: 151..291 score: 7.1
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 331..372 score: 4.
IPR027711	Rmd5	PANTHER	PTHR12170:SF3	REQUIRED FOR MEIOTIC NUCLEAR DIVISION 5 HOMOLOG B (S. CEREVISIAE)	coord: 1..388 score: 1.3E
None	No IPR available	PANTHER	PTHR12170	MACROPHAGE ERYTHROBLAST ATTACHER-RELATED	coord: 1..388 score: 1.3E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 325..383 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla014080	Cla97C01G017370	Watermelon (97103) v2	wmwmbB234
Cla014080	Csa6G497200	Cucumber (Chinese Long) v2	cuwmB500
Cla014080	MELO3C007689	Melon (DHL92) v3.5.1	mewmB570
Cla014080	ClCG01G018120	Watermelon (Charleston Gray)	wcgwmB141
Cla014080	CSPI06G29440	Wild cucumber (PI 183967)	cpiwmB519
Cla014080	Cucsa.103710	Cucumber (Gy14) v1	cgywmB136
Cla014080	CmaCh07G005980	Cucurbita maxima (Rimu)	cmawmB826
Cla014080	CmaCh03G008620	Cucurbita maxima (Rimu)	cmawmB632
Cla014080	CmoCh07G006020	Cucurbita moschata (Rifu)	cmowmB816
Cla014080	Lsi01G008360	Bottle gourd (USVL1VR-Ls)	lsiwmB144
Cla014080	Cp4.1LG19g10320	Cucurbita pepo (Zucchini)	cpewmB482
Cla014080	MELO3C007689.2	Melon (DHL92) v3.6.1	medwmB559
Cla014080	Carg18503	Silver-seed gourd	carwmB0005
Cla014080	Carg00745	Silver-seed gourd	carwmB0407
Cla014080	CsaV3_6G044660	Cucumber (Chinese Long) v3	cucwmB526
Cla014080	Bhi03G000854	Wax gourd	wgowmB426

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla014080	Silver-seed gourd	carwmB0059
Cla014080	Cucumber (Chinese Long) v3	cucwmB274
Cla014080	Watermelon (97103) v2	wmwmbB255
Cla014080	Watermelon (97103) v2	wmwmbB282
Cla014080	Wax gourd	wgowmB633
Cla014080	Watermelon (97103) v1	wmwmB068
Cla014080	Watermelon (97103) v1	wmwmB147
Cla014080	Cucumber (Gy14) v1	cgywmB295
Cla014080	Cucumber (Gy14) v1	cgywmB571
Cla014080	Cucurbita maxima (Rimu)	cmawmB118
Cla014080	Cucurbita maxima (Rimu)	cmawmB762
Cla014080	Cucurbita moschata (Rifu)	cmowmB623
Cla014080	Cucurbita moschata (Rifu)	cmowmB755
Cla014080	Melon (DHL92) v3.5.1	mewmB323
Cla014080	Melon (DHL92) v3.5.1	mewmB377
Cla014080	Watermelon (Charleston Gray)	wcgwmB098
Cla014080	Watermelon (Charleston Gray)	wcgwmB419
Cla014080	Cucumber (Chinese Long) v2	cuwmB136
Cla014080	Cucumber (Chinese Long) v2	cuwmB264
Cla014080	Cucurbita pepo (Zucchini)	cpewmB073
Cla014080	Cucurbita pepo (Zucchini)	cpewmB111
Cla014080	Bottle gourd (USVL1VR-Ls)	lsiwmB325
Cla014080	Bottle gourd (USVL1VR-Ls)	lsiwmB379
Cla014080	Bottle gourd (USVL1VR-Ls)	lsiwmB489
Cla014080	Cucumber (Gy14) v2	cgybwmB249
Cla014080	Cucumber (Gy14) v2	cgybwmB130
Cla014080	Cucumber (Gy14) v2	cgybwmB468
Cla014080	Melon (DHL92) v3.6.1	medwmB320
Cla014080	Melon (DHL92) v3.6.1	medwmB372